characteristic: GISAID Accession ID

text: OH-PACT consortium

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: not provided

characteristic: collecting institution

characteristic: collection date

text: OH-PACT consortium

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: A SARS-CoV-2 specfic multiplex PCR for Nanopore sequencing was performed, similar to amplicon-based approaches as previously described. In short, primers for 86 overlapping amplicons spanning the entire genome were designed using primal. The amplicon length was set to 500bp with 75bp overlap between the different amplicons. The libraries were generated using the native barcode kits from Nanopore (EXP-NBD104 and EXP-NBD114 and SQK-LSK109) and sequenced on a R9.4 flow cell multiplexing up to 24 samples per sequence run. Raw data was demultiplexed, amplicon primers were trimmed and human data was removed by mapping against the human reference genome.

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Noord-Brabant

text: mink

characteristic: host common name

text: not collected

text: Neovison vison

characteristic: host scientific name

text: not provided

text: restricted access

text: hCoV-19/mink/Netherlands/NB-EMC-3-5/2020

text: not collected

characteristic: organism

text: OH-PACT consortium sample sequencing

characteristic: title


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: OH-PACT consortium

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:OH-PACT consortium

characteristic: Submitter Id

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

characteristic: broker name

text: not provided

text: OH-PACT consortium

text: Human coronavirus 2019

characteristic: description

text: Netherlands

text: Noord-Brabant

characteristic: geographic location (region and locality)

text: mink

text: not collected

characteristic: host health state

text: Neovison vison

text: not provided

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/mink/Netherlands/NB-EMC-3-6/2020

characteristic: isolate

text: not collected

characteristic: isolation source host associated

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: OH-PACT consortium sample sequencing


characteristic: GISAID Accession ID

text: OH-PACT consortium

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: not provided

characteristic: collecting institution

characteristic: collection date

text: OH-PACT consortium

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Noord-Brabant

text: human

characteristic: host common name

text: not collected

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: restricted access

text: not collected

characteristic: organism

text: OH-PACT consortium sample sequencing

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: OH-PACT consortium

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

characteristic: broker name

text: not provided

text: OH-PACT consortium

text: Human coronavirus 2019

characteristic: description

text: Netherlands

text: Noord-Brabant

characteristic: geographic location (region and locality)

text: mink

text: not collected

characteristic: host health state

text: Neovison vison

text: not provided

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/mink/Netherlands/NB-EMC-46-3/2020

text: not collected

text: OH-PACT consortium sample sequencing


characteristic: GISAID Accession ID

text: OH-PACT consortium

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: not provided

characteristic: collecting institution

characteristic: collection date

text: OH-PACT consortium

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Noord-Brabant

text: mink

characteristic: host common name

text: not collected

text: Neovison vison

text: not provided

text: restricted access

text: hCoV-19/mink/Netherlands/NB-EMC-61-5/2020

characteristic: isolate

text: not collected

characteristic: isolation source host associated

characteristic: sample capture status

text: OH-PACT consortium sample sequencing


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: OH-PACT consortium

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

characteristic: broker name

text: not provided

text: OH-PACT consortium

text: Human coronavirus 2019

characteristic: description

text: Netherlands

text: Noord-Brabant

characteristic: geographic location (region and locality)

text: mink

text: not collected

text: Neovison vison

characteristic: host scientific name

text: not provided

text: restricted access

text: not collected

characteristic: organism

text: OH-PACT consortium sample sequencing

characteristic: title


text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: SC

text: Lighthouse Lab in Milton Keynes

characteristic: collecting institution

characteristic: collection date

text: Samples prepared at Lighthouse Lab in Milton Keynes by The Lighthouse Lab in Milton Keynes and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

text: Human


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: SC

text: Lighthouse Lab in Glasgow

text: Samples prepared at Lighthouse Lab in Glasgow by Harper VanSteenhouse, Yumi Kasai, David Gray, Carol Clugston, Anna Dominiczak and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: England

text: Human

characteristic: sample capture status


characteristic: External Id

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: SC

text: Samples prepared at Berkshire and Surrey Pathology Services Lighthouse Laboratory by Berkshire and Surrey Pathology Services Lighthouse Laboratory and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

text: United Kingdom

text: England

text: Human


text: SC

text: public

text: SC

characteristic: broker name

text: Berkshire and Surrey Pathology Services Lighthouse Laboratory

characteristic: description

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: Human

characteristic: host scientific name


text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SC

text: Lighthouse Lab in Glasgow

text: United Kingdom

text: Scotland

text: Human

characteristic: organism

characteristic: title


text: SC

text: public

characteristic: SRA accession

text: SC

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

text: Human


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: SC

text: Integrated Covid Hub North East

text: Samples prepared at Integrated Covid Hub North East by Integrated Covid Hub North East and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

text: United Kingdom

text: England

text: Human

characteristic: sample capture status


characteristic: External Id

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: SC

text: Lighthouse Lab in Alderley Park

text: Samples prepared at Lighthouse Lab in Alderley Park by Jacquelyn Wynn, Mairead Hyland, The Lighthouse Lab in Alderley Park and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: England

text: Human


text: Suzhou Ninth People's Hospital

text: public

tag: Namespace:Suzhou Ninth People's Hospital

unit: day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: neuroendocrine cell

characteristic: cell type

text: Norway rat

characteristic: common name

text: Protocols: Female Sprague-Dawley rats in postnatal day-25, 35 and 45 were sacrificed via cervical dislocation.The whole brains were isolated immediately, and embedded by OCT, and cryosectioned coronally to a thickness of 10 μm (bregma: -2.52 to -2.92) using a CryoStar NX70 cryostat (Thermo Fisher Scientific, Waltham, MA, USA). The whole brain of three different pubertal stages were sectioned at this specific region (bregma: 2.52 to 2.92, interaural: 6.08 to 6.48 mm)according to Allen Brain Atlas (Bolser, D. Allen Brain Atlas. (John Wiley & Sons, Ltd, 2014).), and placed on the slides majorly containing the entire arcuate nucleus (ARC). Specific metadata for each sample can be found in the additional EMTAB10976.metadata.txt file Tissue sections were layered onto the visium spatial tissue optimization slide containing oligonucleotides for mRNA capture (10x Genomics, Pleasanton, CA, USA). Each capture area per slide has 5,000 spatially barcoded with a diameter of 55 μm and a center-to-center distance of 100 μm, over an area of 6.5 mm by 6.5 mm. A Master Mix containing reverse transcription (RT) reagents and fluorescently labeled nucleotides is added on top of the tissue sections, resulting in fluorescently labeled cDNA synthesis. Tissue is enzymatically removed, leaving behind fluorescent cDNA covalently linked to oligonucleotides on the slide. Fluorescent cDNA is visualized under fluorescence imaging conditions verified using the Visium Imaging Test Slide. Fluorescent cDNA is visualized under fluorescence imaging conditions verified using the Visium Imaging Test Slide. H&E and fluorescence images are compared. The permeabilization time that results in maximum fluorescence signal with the lowest signal diffusion is optimal. 10x Visium Spatial 3' v1 platform is used

characteristic: description

text: infant

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: brain

characteristic: organism part

text: Rattus norvegicus

text: female

characteristic: sex

text: Sprague Dawley

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Suzhou Ninth People's Hospital

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ArrayExpress

text: neuroendocrine cell

text: Norway rat

text: juvenile stage

text: wild type genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: brain

text: Rattus norvegicus

text: female

text: Sprague Dawley

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Suzhou Ninth People's Hospital

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: neuroendocrine cell

text: Norway rat

text: adult

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: brain

text: Rattus norvegicus

text: female

text: Sprague Dawley


text: UNIVERSITY OF GOTHENBURG

text: public

text: ena-SAMPLE-TAB-28-10-2021-16:40:16:922-12606

tag: Namespace:UNIVERSITY OF GOTHENBURG

characteristic: collection date

text: Reef1_Herthas Flak_US_A

characteristic: description

text: marine water body (ENVO:00001999)

characteristic: environment (biome)

text: marine sub-littoral zone (ENVO:01000126)

characteristic: environment (feature)

text: sea water (ENVO:00002149)

characteristic: environment (material)

text: Denmark

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: multiplex identifiers

text: marine metagenome

text: MiFish-F (GTCGGTAAAACTCGTGCCAGC) and MiFish-R (CATAGTGGGGTATCTAATCCCAGTTTG)

characteristic: pcr primers

text: Environmental DNA monitoring of biodiversity hot-spots in Danish marine waters

characteristic: project name

text: marine metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 12S rRNA

characteristic: target gene

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GOTHENBURG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-28-10-2021-16:40:16:923-12607

characteristic: Submitter Id

text: Reef1_Herthas Flak_US_B

text: marine water body (ENVO:00001999)

text: sea water (ENVO:00002149)

text: Denmark

text: mimarks-survey

text: marine metagenome

characteristic: organism

text: marine metagenome

text: Sequencing by synthesis (Illumina)

text: 12S rRNA

characteristic: title

text: water


text: UNIVERSITY OF GOTHENBURG

text: public

text: ena-SAMPLE-TAB-28-10-2021-16:40:16:923-12608

characteristic: collection date

text: Reef1_Herthas Flak_Reef_A

characteristic: description

text: marine water body (ENVO:00001999)

characteristic: environment (biome)

characteristic: environment (feature)

text: sea water (ENVO:00002149)

characteristic: environment (material)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: multiplex identifiers

text: marine metagenome

characteristic: pcr primers

text: marine metagenome

text: Sequencing by synthesis (Illumina)

text: 12S rRNA

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GOTHENBURG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-28-10-2021-16:40:16:923-12609

text: Reef1_Herthas Flak_Reef_B

text: marine water body (ENVO:00001999)

text: sea water (ENVO:00002149)

text: Denmark

text: mimarks-survey

text: marine metagenome

characteristic: project name

text: marine metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 12S rRNA

characteristic: target gene

text: water

characteristic: water environmental package


text: UNIVERSITY OF GOTHENBURG

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-28-10-2021-16:40:16:923-12610

characteristic: Submitter Id

characteristic: collection date

text: Reef1_Herthas Flak_DS_A

characteristic: description

text: marine water body (ENVO:00001999)

characteristic: environment (biome)

characteristic: environment (feature)

text: sea water (ENVO:00002149)

characteristic: environment (material)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: mimarks-survey

text: marine metagenome

characteristic: organism

text: marine metagenome

text: Sequencing by synthesis (Illumina)

text: 12S rRNA

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GOTHENBURG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-28-10-2021-16:40:16:923-12611

text: Reef1_Herthas Flak_DS_B

text: marine water body (ENVO:00001999)

text: sea water (ENVO:00002149)

text: Denmark

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: multiplex identifiers

text: marine metagenome

characteristic: pcr primers

text: marine metagenome

text: Sequencing by synthesis (Illumina)

text: 12S rRNA

text: water


text: UNIVERSITY OF GOTHENBURG

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-28-10-2021-16:40:16:923-12612

characteristic: Submitter Id

characteristic: collection date

text: Reef2_Per Nilen_US_A

characteristic: description

text: marine water body (ENVO:00001999)

characteristic: environment (biome)

characteristic: environment (feature)

text: sea water (ENVO:00002149)

characteristic: environment (material)

text: Denmark

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: marine metagenome

characteristic: project name

text: marine metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 12S rRNA

characteristic: target gene

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GOTHENBURG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-28-10-2021-16:40:16:923-12613

text: Reef2_Per Nilen_US_B

text: marine water body (ENVO:00001999)

text: sea water (ENVO:00002149)

text: Denmark

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: mimarks-survey

text: marine metagenome

characteristic: organism

text: marine metagenome

text: Sequencing by synthesis (Illumina)

text: 12S rRNA

characteristic: title

text: water


text: UNIVERSITY OF GOTHENBURG

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-28-10-2021-16:40:16:923-12614

characteristic: Submitter Id

characteristic: collection date

text: Reef2_Per Nilen_Reef_A

characteristic: description

text: marine water body (ENVO:00001999)

characteristic: environment (biome)

characteristic: environment (feature)

text: sea water (ENVO:00002149)

characteristic: environment (material)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: multiplex identifiers

text: marine metagenome

characteristic: pcr primers

text: marine metagenome

text: Sequencing by synthesis (Illumina)

text: 12S rRNA

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GOTHENBURG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-28-10-2021-16:40:16:924-12615

text: Reef2_Per Nilen_Reef_B

text: marine water body (ENVO:00001999)

text: sea water (ENVO:00002149)

text: Denmark

text: mimarks-survey

text: marine metagenome

characteristic: project name

text: marine metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 12S rRNA

characteristic: target gene

text: water

characteristic: water environmental package


text: UNIVERSITY OF GOTHENBURG

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-28-10-2021-16:40:16:924-12616

characteristic: Submitter Id

characteristic: collection date

text: Reef2_Per Nilen_DS_A

characteristic: description

text: marine water body (ENVO:00001999)

characteristic: environment (biome)

characteristic: environment (feature)

text: sea water (ENVO:00002149)

characteristic: environment (material)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: mimarks-survey

text: marine metagenome

characteristic: organism

text: marine metagenome

text: Sequencing by synthesis (Illumina)

text: 12S rRNA

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GOTHENBURG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-28-10-2021-16:40:16:924-12617

text: Reef2_Per Nilen_DS_B

text: marine water body (ENVO:00001999)

text: sea water (ENVO:00002149)

text: Denmark

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: multiplex identifiers

text: marine metagenome

characteristic: pcr primers

text: marine metagenome

text: Sequencing by synthesis (Illumina)

text: 12S rRNA

text: water


text: UNIVERSITY OF GOTHENBURG

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-28-10-2021-16:40:16:924-12618

characteristic: Submitter Id

characteristic: collection date

text: Reef3_Tonneberg Banke_US_A

characteristic: description

text: marine water body (ENVO:00001999)

characteristic: environment (biome)

characteristic: environment (feature)

text: sea water (ENVO:00002149)

characteristic: environment (material)

text: Denmark

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: marine metagenome

characteristic: project name

text: marine metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 12S rRNA

characteristic: target gene

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GOTHENBURG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-28-10-2021-16:40:16:924-12619

text: Reef3_Tonneberg Banke_US_B

text: marine water body (ENVO:00001999)

text: sea water (ENVO:00002149)

text: Denmark

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: mimarks-survey

text: marine metagenome

characteristic: organism

text: marine metagenome

text: Sequencing by synthesis (Illumina)

text: 12S rRNA

characteristic: title

text: water


text: UNIVERSITY OF GOTHENBURG

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-28-10-2021-16:40:16:924-12620

characteristic: Submitter Id

characteristic: collection date

text: Reef3_Tonneberg Banke_Reef_A

characteristic: description

text: marine water body (ENVO:00001999)

characteristic: environment (biome)

characteristic: environment (feature)

text: sea water (ENVO:00002149)

characteristic: environment (material)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

characteristic: multiplex identifiers

text: marine metagenome

characteristic: pcr primers

text: marine metagenome

text: Sequencing by synthesis (Illumina)

text: 12S rRNA

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GOTHENBURG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-28-10-2021-16:40:16:924-12621

text: Reef3_Tonneberg Banke_Reef_B

text: marine water body (ENVO:00001999)

text: marine sub-littoral zone (ENVO:01000126)

text: sea water (ENVO:00002149)

text: Denmark

text: mimarks-survey

text: marine metagenome

characteristic: project name

text: marine metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 12S rRNA

characteristic: target gene

text: water

characteristic: water environmental package


text: UNIVERSITY OF GOTHENBURG

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-28-10-2021-16:40:16:924-12622

characteristic: Submitter Id

characteristic: collection date

text: Reef3_Tonneberg Banke_DS_A

characteristic: description

text: marine water body (ENVO:00001999)

characteristic: environment (biome)

characteristic: environment (feature)

text: sea water (ENVO:00002149)

characteristic: environment (material)

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: mimarks-survey

text: marine metagenome

characteristic: organism

text: MiFish-F (GTCGGTAAAACTCGTGCCAGC) and MiFish-R (CATAGTGGGGTATCTAATCCCAGTTTG)

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text: marine metagenome

text: Sequencing by synthesis (Illumina)

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text: water


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characteristic: geographic location (latitude)

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