text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Galway

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: virus identifier


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

unit: DD

text: Europe / Ireland / Dublin

unit: year

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Westmeath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: Homo sapiens

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text: not provided

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/WH-NVRL-M37IRL40233/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Cork

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-M37IRL24715/2021


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

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text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Kildare

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text: human

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text: Homo sapiens

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text: not provided

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text: hCoV-19/Ireland/KE-NVRL-M37IRL51177/2021

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text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Laois

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/LS-NVRL-M37IRL46290/2021

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Limerick

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: Homo sapiens

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text: male

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text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

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characteristic: organism

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text: hCoV-19/Ireland/LK-NVRL-M37IRL38175/2021


characteristic: ENA-CHECKLIST

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text: NVRL

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text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Meath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: Homo sapiens

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text: male

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text: not provided

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text: hCoV-19/Ireland/MH-NVRL-M37IRL12003/2021

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text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Tipperary

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/TA-NVRL-M36IRL94580/2021


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Roscommon

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text: human

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text: not provided

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text: hCoV-19/Ireland/RN-NVRL-M37IRL17685/2021

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text: NVRL

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text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Meath

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/MH-NVRL-M37IRL12592/2021

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Waterford

characteristic: geographic location (region and locality)

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text: human

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text: Homo sapiens

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text: not provided

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/WD-NVRL-M37IRL49480/2021


characteristic: ENA-CHECKLIST

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text: NVRL

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text: Irish Consortium for Sequencing Covid

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text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Meath

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/MH-NVRL-M37IRL12619/2021

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

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text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Roscommon

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characteristic: host age

text: human

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text: Homo sapiens

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text: not provided

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text: hCoV-19/Ireland/RN-NVRL-M37IRL17805/2021

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text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Meath

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/MH-NVRL-M37IRL12247/2021


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Laois

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text: human

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text: Homo sapiens

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text: not provided

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text: hCoV-19/Ireland/LS-NVRL-M36IRL98826/2021

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characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

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text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

text: Europe / Ireland / Laois

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/LS-NVRL-M36IRL98733/2021

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

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characteristic: common name

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text: Ireland

characteristic: geographic location (country and/or sea)

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characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

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text: Severe acute respiratory syndrome coronavirus 2

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characteristic: ENA-CHECKLIST

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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characteristic: collection date

text: not provided

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text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Laois

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/LS-NVRL-M36IRL98884/2021

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Westmeath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: Homo sapiens

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text: female

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text: not provided

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text: Oro-Nasopharyngeal swab

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characteristic: organism

text: hCoV-19/Ireland/WH-NVRL-M36IRL97602/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: NVRL

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text: public

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Offaly

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/OY-NVRL-M36IRL98556/2021


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Longford

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: Homo sapiens

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text: male

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text: not provided

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/LD-NVRL-M37IRL27208/2021

characteristic: title


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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characteristic: collection date

text: not provided

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text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Kerry

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/KY-NVRL-M37IRL01157/2021

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

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characteristic: common name

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text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Longford

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: not provided

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/LD-NVRL-M36IRL97521/2021


characteristic: ENA-CHECKLIST

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characteristic: External Id

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characteristic: broker name

text: National Virus Reference Laboratory

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characteristic: collection date

text: not provided

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text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

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text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Laois

characteristic: geographic location (region and locality)

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text: human

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text: Homo sapiens

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text: male

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text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/LS-NVRL-M36IRL98856/2021

characteristic: virus identifier


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text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Limerick

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/LK-NVRL-M37IRL01340/2021


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Westmeath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/WH-NVRL-M37IRL22565/2021

characteristic: title


characteristic: ENA-CHECKLIST

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text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

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text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Laois

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/LS-NVRL-M37IRL21765/2021

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Sligo

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: Homo sapiens

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text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

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characteristic: organism

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text: hCoV-19/Ireland/SO-NVRL-M37IRL33417/2021


characteristic: ENA-CHECKLIST

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text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

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text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Sligo

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/SO-NVRL-M37IRL09317/2021

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/CW-NVRL-M37IRL19487/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

text: Europe / Ireland / Galway

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-M37IRL13876/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Kerry

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status

text: hCoV-19/Ireland/KY-NVRL-M37IRL09141/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Carlow

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CW-NVRL-M37IRL19409/2021

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Donegal

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/DL-NVRL-M37IRL16453/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Donegal

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/DL-NVRL-M37IRL16360/2021


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Roscommon

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/RN-NVRL-M37IRL17659/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Cork

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CO-NVRL-M37IRL50725/2021

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Cork

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CO-NVRL-M37IRL09101/2021

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Roscommon

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/RN-NVRL-M37IRL10303/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Laois

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/LS-NVRL-M37IRL46383/2021


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Meath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/MH-NVRL-M37IRL01367/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Longford

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/LD-NVRL-M37IRL36266/2021

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Westmeath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/WH-NVRL-M37IRL37458/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Meath

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/MH-NVRL-M37IRL12613/2021

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/CW-NVRL-M37IRL20040/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Westmeath

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status

text: hCoV-19/Ireland/WH-NVRL-M37IRL18408/2021


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: active surveillance in response to outbreak

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Limerick

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/LK-NVRL-M37IRL38612/2021

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Galway

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Offaly

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/OY-NVRL-M37IRL27042/2021

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Offaly

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/OY-NVRL-M37IRL27036/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Longford

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/LD-NVRL-M37IRL22718/2021


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/TA-NVRL-M37IRL45153/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Cork

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CO-NVRL-M37IRL06822/2021

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Roscommon

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/RN-NVRL-M37IRL41225/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Roscommon

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/RN-NVRL-M37IRL05854/2021

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/TA-NVRL-M36IRL94590/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-M37IRL39199/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Donegal

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/DL-NVRL-M37IRL41421/2021

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Sligo

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/SO-NVRL-M37IRL05305/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF BRITISH COLUMBIA

characteristic: Submitter Id

characteristic: collection date

text: human-gut

characteristic: environment (biome)

text: duodenal

characteristic: environment (feature)

text: duodenal

characteristic: environment (material)

text: Central African Republic

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: gut metagenome

text: Afribiota

characteristic: project name

text: gut metagenome

text: Illumina

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

text: human-gut

text: duodenal

text: duodenal

text: Madagascar

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

text: metagenome

text: gut metagenome

characteristic: organism

text: Afribiota

text: gut metagenome

text: Illumina


characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human-gut

text: gastric

text: gastric

text: Central African Republic

text: human-gut

text: metagenome

text: gut metagenome

text: Afribiota

text: gut metagenome

text: Illumina


text: UNIVERSITY OF BRITISH COLUMBIA

text: public

characteristic: collection date

text: human-gut

characteristic: environment (biome)

text: gastric

characteristic: environment (feature)

text: gastric

characteristic: environment (material)

text: Madagascar

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: gut metagenome

text: Afribiota

characteristic: project name

text: gut metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

text: human-gut

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: metagenome

text: gut metagenome

text: Afribiota

text: gut metagenome

text: Illumina

characteristic: sequencing method

characteristic: title


characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: human-gut

text: swab

text: swab

text: Central African Republic

characteristic: geographic location (longitude)

text: human-gut

text: metagenome

text: gut metagenome

characteristic: organism

text: Afribiota

text: gut metagenome

text: Illumina


text: UNIVERSITY OF BRITISH COLUMBIA

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: human-gut

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Madagascar

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: gut metagenome

text: Afribiota

text: gut metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

text: human-gut

text: feces

text: feces

text: Central African Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: metagenome

characteristic: investigation type

text: gut metagenome

text: Afribiota

characteristic: project name

text: gut metagenome

text: Illumina


characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: human-gut

text: Central African Republic

text: human-gut

text: metagenome

text: gut metagenome

text: Afribiota

text: gut metagenome

text: Illumina

characteristic: sequencing method

characteristic: title


text: UNIVERSITY OF BRITISH COLUMBIA

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: human-gut

characteristic: environment (biome)

text: Madagascar

characteristic: geographic location (longitude)

text: human-gut

text: metagenome

text: gut metagenome

characteristic: organism

text: Afribiota

text: gut metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Graz University of Technology

text: public

tag: Namespace:Graz University of Technology

text: tomato

characteristic: common name

text: 52�33�N, 13�22�O

characteristic: coordinates

text: Rhizosphere microbiome

characteristic: description

text: Solanum lycopersicum

characteristic: sampling date

text: Solanum lycopersicum


characteristic: External Id

text: UP-IGM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Mycobacterium canettii

text: Mycobacterium canettii

text: Mycobacterium canettii


text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:USC (Universidad de Santiago de Compostela)

text: CNAG-CRG

characteristic: broker name

text: Universidad de Santiago de Compostela

characteristic: collected by

text: Senegalese sole

text: Mediterranean Sea

characteristic: geographic location (country and/or sea)

text: Galicia, Spain

characteristic: geographic location (region and locality)

text: Solea senegalensis

text: Solea senegalensis

text: female

characteristic: sex

text: AR6759 genomic DNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: USC (Universidad de Santiago de Compostela)

text: public

characteristic: Submitter Id

text: CNAG-CRG

text: Universidad de Santiago de Compostela

characteristic: collection date

text: Senegalese sole

text: Mediterranean Sea

text: Galicia, Spain

text: Solea senegalensis

characteristic: organism

text: Solea senegalensis

text: female

text: AR6760 genomic DNA


characteristic: External Id

characteristic: INSDC center name

text: public

text: CNAG-CRG

text: Universidad de Santiago de Compostela

text: Senegalese sole

characteristic: common name

text: Mediterranean Sea

text: Galicia, Spain

text: Solea senegalensis

text: Solea senegalensis

text: female

text: AR6761 genomic DNA


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: CNAG-CRG

text: Universidad de Santiago de Compostela

text: Senegalese sole

text: Mediterranean Sea

text: Galicia, Spain

text: Solea senegalensis

text: Solea senegalensis

text: female

text: AR6762 genomic DNA


text: public

characteristic: SRA accession

text: CNAG-CRG

characteristic: broker name

text: Universidad de Santiago de Compostela

characteristic: collected by

text: Senegalese sole

text: Mediterranean Sea

text: Galicia, Spain

text: Solea senegalensis

text: Solea senegalensis

text: female

text: AR6763 genomic DNA


text: public

text: CNAG-CRG

text: Universidad de Santiago de Compostela

text: Senegalese sole

text: Mediterranean Sea

characteristic: geographic location (country and/or sea)

text: Galicia, Spain

characteristic: geographic location (region and locality)

text: Solea senegalensis

text: Solea senegalensis

text: male

characteristic: sex

text: AR6764 genomic DNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: CNAG-CRG

text: Universidad de Santiago de Compostela

text: Senegalese sole

text: Mediterranean Sea

text: Galicia, Spain

text: Solea senegalensis

text: Solea senegalensis

text: male

text: AR6765 genomic DNA

characteristic: title


characteristic: ENA-LAST-UPDATE

text: public

characteristic: Submitter Id

text: CNAG-CRG

text: Universidad de Santiago de Compostela

characteristic: collection date

text: Senegalese sole

text: Mediterranean Sea

text: Galicia, Spain

text: Solea senegalensis

text: Solea senegalensis

text: male

text: AR6766 genomic DNA


characteristic: External Id

characteristic: INSDC center name

text: public

text: CNAG-CRG

text: Universidad de Santiago de Compostela

text: Senegalese sole

text: Mediterranean Sea

text: Galicia, Spain

text: Solea senegalensis

characteristic: organism

text: Solea senegalensis

text: male

text: AR6767 genomic DNA


characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: CNAG-CRG

text: Universidad de Santiago de Compostela

text: Senegalese sole

characteristic: common name

text: Mediterranean Sea

text: Galicia, Spain

text: Solea senegalensis

text: Solea senegalensis

text: male

text: AR6768 genomic DNA


text: WAGENINGEN UR

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:WAGENINGEN UR

text: Wageningen Bioveterinary Research

text: Campylobacter coli

text: No

characteristic: environmental sample

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: healthy

characteristic: host health state

text: pig

characteristic: host scientific name

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: WAGENINGEN UR

text: public

characteristic: Submitter Id

text: Wageningen Bioveterinary Research

characteristic: collected by

text: Campylobacter coli

text: No

text: Netherlands

characteristic: geographic location (country and/or sea)

text: healthy

text: turkey

text: No

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli

characteristic: title


characteristic: External Id

text: WAGENINGEN UR

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Wageningen Bioveterinary Research

characteristic: collection date

text: Campylobacter jejuni

characteristic: common name

text: No

text: Netherlands

text: healthy

text: turkey

text: No

text: Campylobacter jejuni

characteristic: organism

text: Campylobacter jejuni

text: Campylobacter jejuni


text: WAGENINGEN UR

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Wageningen Bioveterinary Research

text: Campylobacter coli

text: No

characteristic: environmental sample

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: healthy

characteristic: host health state

text: veal calf

characteristic: host scientific name

text: No

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: WAGENINGEN UR

text: public

characteristic: Submitter Id

text: Wageningen Bioveterinary Research

characteristic: collected by

text: Campylobacter jejuni

text: No

text: Netherlands

text: healthy

text: veal calf

text: No

characteristic: is the sequenced pathogen host associated?

characteristic: isolate

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni


characteristic: External Id

text: WAGENINGEN UR

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Wageningen Bioveterinary Research

characteristic: collection date

text: Campylobacter coli

text: No

text: Netherlands

characteristic: geographic location (country and/or sea)

text: healthy

text: broiler

text: No

text: Campylobacter coli

text: Campylobacter coli

text: Campylobacter coli

characteristic: title


text: WAGENINGEN UR

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Wageningen Bioveterinary Research

text: Campylobacter jejuni

characteristic: common name

text: No

characteristic: environmental sample

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: healthy

text: broiler

text: No

text: Campylobacter jejuni

characteristic: organism

text: Campylobacter jejuni

text: Campylobacter jejuni


C I

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: C I

tag: Namespace:FRIEDRICH SCHILLER UNIVERSITY JENA

characteristic: Submitter Id

text: DNA-based analysis

characteristic: description

text: temperate forest

characteristic: environment (biome)

text: mesocosm experiment

characteristic: environment (feature)

text: beech leaves

characteristic: environment (material)

text: Germany

text: mimarks-survey

characteristic: investigation type

text: uncultured bacterium

text: plant-associated

characteristic: plant-associated environmental package

text: AquaDiva

characteristic: project name

text: uncultured bacterium

text: Illumina MiSeq

characteristic: sequencing method

text: bacterial diversity in beech phyllosphere


C II

characteristic: External Id

text: FRIEDRICH SCHILLER UNIVERSITY JENA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: C II

characteristic: collection date

text: DNA-based analysis

text: temperate forest

text: mesocosm experiment

text: beech leaves

text: Germany

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: uncultured bacterium

text: plant-associated

text: AquaDiva

text: uncultured bacterium

text: Illumina MiSeq

characteristic: title


C III

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: C III

characteristic: Submitter Id

text: DNA-based analysis

characteristic: description

text: temperate forest

text: mesocosm experiment

text: beech leaves

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

text: uncultured bacterium

characteristic: organism

text: plant-associated

text: AquaDiva

text: uncultured bacterium

text: Illumina MiSeq


L I

characteristic: External Id

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: L I

text: DNA-based analysis

text: temperate forest

characteristic: environment (biome)

text: mesocosm experiment

characteristic: environment (feature)

text: beech leaves

characteristic: environment (material)

text: Germany

text: mimarks-survey

characteristic: investigation type

text: uncultured bacterium

text: plant-associated

characteristic: plant-associated environmental package

text: AquaDiva

characteristic: project name

text: uncultured bacterium

text: Illumina MiSeq

characteristic: sequencing method


L II

text: FRIEDRICH SCHILLER UNIVERSITY JENA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: L II

characteristic: collection date

text: DNA-based analysis

text: temperate forest

text: mesocosm experiment

text: beech leaves

text: Germany

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: uncultured bacterium

text: plant-associated

text: AquaDiva

text: uncultured bacterium

text: Illumina MiSeq

characteristic: title


L III

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: L III

characteristic: Submitter Id

text: DNA-based analysis

characteristic: description

text: temperate forest

text: mesocosm experiment

text: beech leaves

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

text: uncultured bacterium

characteristic: organism

text: plant-associated

text: AquaDiva

text: uncultured bacterium

text: Illumina MiSeq


A I

characteristic: External Id

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: A I

text: DNA-based analysis

text: temperate forest

characteristic: environment (biome)

text: mesocosm experiment

characteristic: environment (feature)

text: beech leaves

characteristic: environment (material)

text: Germany

text: mimarks-survey

characteristic: investigation type

text: uncultured bacterium

text: plant-associated

characteristic: plant-associated environmental package

text: AquaDiva

characteristic: project name

text: uncultured bacterium

text: Illumina MiSeq

characteristic: sequencing method


A II

text: FRIEDRICH SCHILLER UNIVERSITY JENA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: A II

characteristic: collection date

text: DNA-based analysis

text: temperate forest

text: mesocosm experiment

text: beech leaves

text: Germany

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: uncultured bacterium

text: plant-associated

text: AquaDiva

text: uncultured bacterium

text: Illumina MiSeq

characteristic: title


A III

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: A III

characteristic: Submitter Id

text: DNA-based analysis

characteristic: description

text: temperate forest

text: mesocosm experiment

text: beech leaves

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

text: uncultured bacterium

characteristic: organism

text: plant-associated

text: AquaDiva

text: uncultured bacterium

text: Illumina MiSeq


AH I

characteristic: External Id

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: AH I

text: DNA-based analysis

text: temperate forest

characteristic: environment (biome)

text: mesocosm experiment

characteristic: environment (feature)

text: beech leaves

characteristic: environment (material)

text: Germany

text: mimarks-survey

characteristic: investigation type

text: uncultured bacterium

text: plant-associated

characteristic: plant-associated environmental package

text: AquaDiva

characteristic: project name

text: uncultured bacterium

text: Illumina MiSeq

characteristic: sequencing method


AH II

text: FRIEDRICH SCHILLER UNIVERSITY JENA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: AH II

characteristic: collection date

text: DNA-based analysis

text: temperate forest

text: mesocosm experiment

text: beech leaves

text: Germany

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: uncultured bacterium

text: plant-associated

text: AquaDiva

text: uncultured bacterium

text: Illumina MiSeq

characteristic: title


AH III

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: FRIEDRICH SCHILLER UNIVERSITY JENA

text: public

text: AH III

characteristic: Submitter Id

text: DNA-based analysis

characteristic: description

text: temperate forest

text: mesocosm experiment

text: beech leaves

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

text: uncultured bacterium

characteristic: organism

text: plant-associated

text: AquaDiva

text: uncultured bacterium

text: Illumina MiSeq


characteristic: External Id

text: UNIVERSIDAD DE JAEN

text: public

tag: Namespace:UNIVERSIDAD DE JAEN

text: Chicamocha river sediments

text: metagenome

text: metagenome


text: INSTITUT PASTEUR

characteristic: INSDC center name

text: public

tag: Namespace:INSTITUT PASTEUR

text: Neobacillus sp. JJ-3

text: Neobacillus sp. JJ-3

text: whole genome sequencing of Neobacillus sp. JJ-3 = CIP111895


characteristic: INSDC first public

text: public

tag: Namespace:UNIVERSITY OF ZURICH, UNIVERSITY HOSPITAL ZURICH

characteristic: cell type

text: human

characteristic: common name

text: Huh-7 cells in basal conditions

characteristic: filename

text: Homo sapiens

text: Homo sapiens

characteristic: total reads


text: UNIVERSITY OF ZURICH, UNIVERSITY HOSPITAL ZURICH

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: human

text: Huh-7 cells in basal conditions

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Respiratory Department

text: public

tag: Namespace:Respiratory Department

text: Tianjin Medical University General Hospital

characteristic: collected by

characteristic: collection date

text: human

text: pathogenic detection of patient alveolar lavage fluid

text: China

characteristic: geographic location (country and/or sea)

text: human

characteristic: host scientific name

text: non

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Respiratory Department

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: human

text: Pathogenic detection of patient pulmonary tissue

characteristic: description

text: China

text: human

text: non

text: Homo sapiens

characteristic: organism

text: Homo sapiens


NxB

text: ETH ZURICH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: NxB

tag: Namespace:ETH ZURICH

text: cattle

characteristic: common name

text: ONT sequencing for trio binning

text: Bos taurus

text: Bos taurus

text: ONT sequencing for trio binning


OxO

characteristic: ENA-CHECKLIST

text: ETH ZURICH

text: public

characteristic: INSDC status

characteristic: SRA accession

text: OxO

text: cattle

text: ONT sequencing for trio binning

text: Bos taurus

text: Bos taurus

text: ONT sequencing for trio binning


characteristic: ENA-FIRST-PUBLIC

text: Friedrich-Loeffler-Institute

text: public

text: IZW Berlin

characteristic: collecting institution

characteristic: collection date

text: IZW Berlin

characteristic: collector name

text: Hedwig virus

text: A novel peribunyavirid found in snowy owl

text: Germany

text: Berlin Friedrichsfelde, Berlin

characteristic: geographic location (region and locality)

text: Snowy Owl

characteristic: host common name

text: dead

characteristic: host disease outcome

text: diseased

characteristic: host health state

text: Bubo scandiacus

text: not provided

characteristic: host sex

characteristic: host subject id

text: spleen tissue

characteristic: isolation source host associated

text: Hedwig virus

text: active surveillance in response to outbreak

characteristic: sample capture status

text: Hedwig virus

text: Hedwig virus/Germany/2018/Bubo scandiacus/ED-I-079-18

characteristic: virus identifier


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Friedrich-Loeffler-Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: not provided

text: not provided

text: not provided

text: Asum virus

characteristic: common name

text: Asum virus found in mosquito SRA dataset SRR8480621

characteristic: description

text: Sweden

characteristic: geographic location (country and/or sea)

text: Kristianstad, Sweden

text: Culex pipiens

text: dead

text: Culex pipiens

characteristic: host scientific name

text: not provided

text: not provided

characteristic: isolate

text: Mosquito pool

text: Asum virus

characteristic: organism

text: active surveillance not initiated by an outbreak

text: Asum virus

text: Asum virus/Sweden/2006-07/Culex pipiens/PRJNA516782

characteristic: title

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Friedrich-Loeffler-Institute

text: public

characteristic: INSDC status

characteristic: SRA accession

text: LAV Stendal

characteristic: collecting institution

characteristic: collection date

text: LAV Stendal

characteristic: collector name

text: Umatilla virus

text: Umatilla virus found in blue tit brain

text: Germany

text: Halle, Saxony-Anhalt

characteristic: geographic location (region and locality)

text: Blue Tit

characteristic: host common name

text: dead

characteristic: host disease outcome

text: diseased

characteristic: host health state

text: Parus caeruleus

text: not provided

characteristic: host sex

characteristic: host subject id

text: brain tissue

text: Umatilla virus

text: Umatilla virus

text: Umatilla virus/Germany/2019/Parus caeruleus/ED-I-87_19


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Friedrich-Loeffler-Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: LUA Leipzig

text: LUA Leipzig

text: Umatilla virus

characteristic: common name

text: Umatilla virus found in great tit organhomogenate supernatant

characteristic: description

text: Germany

characteristic: geographic location (country and/or sea)

text: Bad Dueben, LK Nordsachsen, Saxony

text: Great tit

text: dead

text: diseased

text: Parus major

characteristic: host scientific name

text: not provided

text: organhomogenate-supernatant

characteristic: isolation source host associated

text: Umatilla virus

characteristic: sample capture status

text: Umatilla virus

text: Umatilla virus/Germany/2019/Parus major/ED-I-205_19

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Friedrich-Loeffler-Institute

text: public

characteristic: INSDC status

characteristic: SRA accession

text: private person

characteristic: collecting institution

characteristic: collection date

text: private person

characteristic: collector name

text: Umatilla virus

text: Umatilla virus found in blackbird liver inoculated in C6/36 cells

text: Germany

text: Roggentin, Rostock

characteristic: geographic location (region and locality)

text: Blackbird

characteristic: host common name

text: dead

characteristic: host disease outcome

text: diseased

text: Turdus merula

text: not provided

characteristic: isolate

text: liver

text: Umatilla virus

characteristic: organism

text: Umatilla virus

text: Umatilla virus/Germany/2019/Turdus merula/ED-I-093_19

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Friedrich-Loeffler-Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: FLI Riems

text: FLI Riems

text: Alphamesonivirus 1

characteristic: common name

text: Alphamesonivirus 1 found in mosquito pools inoculated in C6/36 cells

characteristic: description

text: Germany

characteristic: geographic location (country and/or sea)

text: Berlin Friedrichsfelde, Berlin

text: Mosquito

text: dead

text: Culex pipiens

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host subject id

text: Mosquito pool

text: Alphamesonivirus 1

text: Alphamesonivirus 1

text: Alphamesonivirus 1/Germany/2019/Culex pipiens/C6_T167_57


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status

text: hCoV-19/Ireland/TA-NVRL-M37IRL17987/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

unit: years

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-M37IRL06045/2021


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Leitrim

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/LM-NVRL-M37IRL06788/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Leitrim

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: active surveillance in response to outbreak

text: hCoV-19/Ireland/LM-NVRL-M37IRL06797/2021

characteristic: virus identifier


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Meath

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/MH-NVRL-M37IRL03760/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Meath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/MH-NVRL-M36IRL92731/2021

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Kildare

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/KE-NVRL-M36IRL92315/2021

characteristic: virus identifier