text: UCSDMI

text: public

text: not provided

text: Low

text: Low

text: Low

text: Fecal Pellet

text: meters

text: host-associated

text: animal-associated

text: animal distal gut

text: feces

text: urban biome

text: animal-associated habitat

text: host-associated

characteristic: env package

text: feces

text: not provided

characteristic: host age

text: gut

characteristic: host body habitat

text: feces

characteristic: host body product

text: gastrointestinal

characteristic: host body site

text: house mouse

characteristic: host common name

text: not provided

characteristic: host height

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: not provided

characteristic: host weight

text: not provided

text: not provided

text: not provided

text: High

text: High

text: High

text: High

characteristic: latitude

characteristic: longitude

text: Sham

characteristic: manipulation

text: mouse gut metagenome

text: Boulder, CO, USA

text: Low

text: Low

text: Low

text: High

text: Low

text: feces

characteristic: sample type

text: mouse gut metagenome

text: Low

text: No-Trauma

characteristic: trauma


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

text: Low

text: Low

text: High

text: Fecal Pellet

characteristic: description

characteristic: elevation

text: meters

text: host-associated

text: animal-associated

text: animal distal gut

text: feces

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

text: feces

text: not provided

text: gut

text: feces

text: gastrointestinal

text: house mouse

text: not provided

text: Mus musculus

text: not provided

text: not provided

text: not provided

text: not provided

text: High

text: High

text: High

text: High

text: PT+HS

text: mouse gut metagenome

characteristic: organism

text: Boulder, CO, USA

text: High

text: High

text: High

text: High

text: High

text: feces

text: mouse gut metagenome

characteristic: title

text: Medium

text: Trauma


text: UCSDMI

text: public

text: not provided

text: Low

text: High

text: Low

text: Fecal Pellet

text: meters

text: host-associated

text: animal-associated

text: animal distal gut

text: feces

text: urban biome

text: animal-associated habitat

text: host-associated

characteristic: env package

text: feces

text: not provided

characteristic: host age

text: gut

characteristic: host body habitat

text: feces

characteristic: host body product

text: gastrointestinal

characteristic: host body site

text: house mouse

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text: not provided

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text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

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text: not provided

characteristic: host weight

text: not provided

text: not provided

text: not provided

text: Low

text: High

text: Low

text: Low

characteristic: latitude

characteristic: longitude

text: PT

characteristic: manipulation

text: mouse gut metagenome

text: Boulder, CO, USA

text: Low

text: Low

text: Low

text: High

text: High

text: feces

characteristic: sample type

text: mouse gut metagenome

text: Low

text: Trauma

characteristic: trauma


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

text: Low

text: Low

text: Low

text: Fecal Pellet

characteristic: description

characteristic: elevation

text: meters

text: host-associated

text: animal-associated

text: animal distal gut

text: feces

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

text: feces

text: not provided

text: gut

text: feces

text: gastrointestinal

text: house mouse

text: not provided

text: Mus musculus

text: not provided

text: not provided

text: not provided

text: not provided

text: Low

text: High

text: Low

text: Low

text: PT+HS

text: Low

text: Low

text: mouse gut metagenome

characteristic: organism

text: Boulder, CO, USA

text: High

text: High

text: High

text: High

text: High

text: feces

text: mouse gut metagenome

characteristic: title

text: High

text: Trauma


text: UCSDMI

text: public

text: not provided

text: High

text: Low

text: High

text: Fecal Pellet

text: meters

text: host-associated

text: animal-associated

text: animal distal gut

text: feces

text: urban biome

text: animal-associated habitat

text: host-associated

characteristic: env package

text: feces

text: not provided

characteristic: host age

text: gut

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text: feces

characteristic: host body product

text: gastrointestinal

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text: house mouse

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text: not provided

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text: Mus musculus

characteristic: host scientific name

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text: not provided

characteristic: host weight

text: not provided

text: not provided

text: not provided

text: High

text: High

text: High

text: High

characteristic: latitude

characteristic: longitude

text: Sham

characteristic: manipulation

text: mouse gut metagenome

text: Boulder, CO, USA

text: Low

text: High

text: High

text: High

text: Low

text: feces

characteristic: sample type

text: mouse gut metagenome

text: Low

text: No-Trauma

characteristic: trauma


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

text: High

text: Low

text: High

text: Fecal Pellet

characteristic: description

characteristic: elevation

text: meters

text: host-associated

text: animal-associated

text: animal distal gut

text: feces

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

text: feces

text: not provided

text: gut

text: feces

text: gastrointestinal

text: house mouse

text: not provided

text: Mus musculus

text: not provided

text: not provided

text: not provided

text: not provided

text: Low

text: Low

text: High

text: High

text: PT+HS

text: High

text: High

text: mouse gut metagenome

characteristic: organism

text: Boulder, CO, USA

text: High

text: High

text: High

text: High

text: Low

text: feces

text: mouse gut metagenome

characteristic: title

text: High

text: Trauma


text: UCSDMI

text: public

text: not provided

text: High

text: High

text: High

text: Fecal Pellet

text: meters

text: host-associated

text: animal-associated

text: animal distal gut

text: feces

text: urban biome

text: animal-associated habitat

text: host-associated

characteristic: env package

text: feces

text: not provided

characteristic: host age

text: gut

characteristic: host body habitat

text: feces

characteristic: host body product

text: gastrointestinal

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text: house mouse

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text: not provided

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text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

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text: not provided

characteristic: host weight

text: not provided

text: not provided

text: not provided

text: Low

text: Low

text: Low

text: High

characteristic: latitude

characteristic: longitude

text: PT

characteristic: manipulation

text: mouse gut metagenome

text: Boulder, CO, USA

text: High

text: High

text: High

text: High

text: Low

text: feces

characteristic: sample type

text: mouse gut metagenome

text: Low

text: Trauma

characteristic: trauma


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

text: High

text: Low

text: High

text: Fecal Pellet

characteristic: description

characteristic: elevation

text: meters

text: host-associated

text: animal-associated

text: animal distal gut

text: feces

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

text: feces

text: not provided

text: gut

text: feces

text: gastrointestinal

text: house mouse

text: not provided

text: Mus musculus

text: not provided

text: not provided

text: not provided

text: not provided

text: Low

text: Low

text: High

text: Low

text: HS

text: Low

text: Low

text: mouse gut metagenome

characteristic: organism

text: Boulder, CO, USA

text: Low

text: High

text: High

text: Low

text: Low

text: feces

text: mouse gut metagenome

characteristic: title

text: High

text: Trauma


text: UCSDMI

text: public

text: not provided

text: High

text: High

text: High

text: Fecal Pellet

text: meters

text: host-associated

text: animal-associated

text: animal distal gut

text: feces

text: urban biome

text: animal-associated habitat

text: host-associated

characteristic: env package

text: feces

text: not provided

characteristic: host age

text: gut

characteristic: host body habitat

text: feces

characteristic: host body product

text: gastrointestinal

characteristic: host body site

text: house mouse

characteristic: host common name

text: not provided

characteristic: host height

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

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text: not provided

characteristic: host weight

text: not provided

text: not provided

text: not provided

text: High

text: High

text: High

text: Low

characteristic: latitude

characteristic: longitude

text: Sham

characteristic: manipulation

text: mouse gut metagenome

text: Boulder, CO, USA

text: Low

text: Low

text: Low

text: Low

text: High

text: feces

characteristic: sample type

text: mouse gut metagenome

text: Low

text: No-Trauma

characteristic: trauma


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

text: High

text: High

text: Low

text: Fecal Pellet

characteristic: description

characteristic: elevation

text: meters

text: host-associated

text: animal-associated

text: animal distal gut

text: feces

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

text: feces

text: not provided

text: gut

text: feces

text: gastrointestinal

text: house mouse

text: not provided

text: Mus musculus

text: not provided

text: not provided

text: not provided

text: not provided

text: High

text: High

text: Low

text: Low

text: Ctrl

text: mouse gut metagenome

characteristic: organism

text: Boulder, CO, USA

text: Low

text: Low

text: Low

text: not provided

text: not provided

text: not provided

text: not provided

text: feces

text: mouse gut metagenome

characteristic: title

text: Low

text: No-Trauma


text: UNIVERISTY OF CALIFORNIA, SANTA CRUZ

text: public

tag: Namespace:UNIVERISTY OF CALIFORNIA, SANTA CRUZ

text: baker's yeast

characteristic: common name

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


characteristic: ENA-CHECKLIST

text: SC

text: public

text: SC

characteristic: broker name

text: Lighthouse Lab in Milton Keynes

characteristic: collecting institution

characteristic: collection date

text: Samples prepared at Lighthouse Lab in Milton Keynes by The Lighthouse Lab in Milton Keynes and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: Human

characteristic: host scientific name

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SC

text: Lighthouse Lab in Alderley Park

text: Samples prepared at Lighthouse Lab in Alderley Park by Jacquelyn Wynn, Mairead Hyland, The Lighthouse Lab in Alderley Park and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: England

text: Human


text: SC

text: public

characteristic: Submitter Id

text: SC

text: Lighthouse Lab in Milton Keynes

characteristic: description

text: United Kingdom

text: Wales

text: Human

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

text: SC

text: public

text: SC

characteristic: broker name

text: Lighthouse Lab in Alderley Park

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

text: Wales

text: Human


text: SC

text: public

text: SC

text: Samples prepared at Berkshire and Surrey Pathology Services Lighthouse Laboratory by Berkshire and Surrey Pathology Services Lighthouse Laboratory and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

characteristic: geographic location (region and locality)

text: Human

characteristic: host scientific name

characteristic: sample capture status


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: SC

text: Berkshire and Surrey Pathology Services Lighthouse Laboratory

text: United Kingdom

text: Wales

text: Human


text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SC

text: Lighthouse Lab in Milton Keynes

text: United Kingdom

text: Scotland

text: Human


text: SC

text: public

characteristic: Submitter Id

text: SC

text: Lighthouse Lab in Glasgow

text: Samples prepared at Lighthouse Lab in Glasgow by Harper VanSteenhouse, Yumi Kasai, David Gray, Carol Clugston, Anna Dominiczak and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

characteristic: description

text: United Kingdom

text: Scotland

text: Human

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

text: SC

text: public

text: SC

characteristic: broker name

text: Lighthouse Lab in Glasgow

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

text: Wales

text: Human


text: SC

text: public

text: SC

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: Human

characteristic: host scientific name

characteristic: sample capture status


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: SC

text: Rosalind Franklin Laboratory

text: Samples prepared at Rosalind Franklin Laboratory by Donald Fraser, Suki Lee, Rob Howes, The Rosalind Franklin Laboratory and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

text: United Kingdom

text: England

text: Human


text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SC

text: Integrated Covid Hub North East

text: Samples prepared at Integrated Covid Hub North East by Integrated Covid Hub North East and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

text: United Kingdom

text: England

text: Human


text: SC

text: public

characteristic: Submitter Id

text: SC

text: Lighthouse Lab in Glasgow

characteristic: description

text: United Kingdom

text: England

text: Human

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

text: SC

text: public

text: SC

characteristic: broker name

text: Integrated Covid Hub North East

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

text: Scotland

text: Human


text: SC

text: public

text: SC

text: Health Services Laboratories

text: Samples prepared at Health Services Laboratories by Health Services Laboratories and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: Human

characteristic: host scientific name

characteristic: sample capture status


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: SC

text: Lighthouse Laboratory Plymouth

text: Samples prepared at Lighthouse Laboratory Plymouth by Lighthouse Laboratory Plymouth and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: England

text: Human


characteristic: GISAID Accession ID

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Center for Laboratory Medicine St. Gallen

text: SIB

text: Center for Laboratory Medicine, St. Gallen, Switzerland

text: Yannick Gerth

characteristic: collector name

text: Switzerland

text: SG

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/SG-CLM-10116188/2021

characteristic: isolate


characteristic: ENA-CHECKLIST

text: Center for Laboratory Medicine St. Gallen

text: public

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Yannick Gerth

text: Switzerland

characteristic: geographic location (country and/or sea)

text: SG

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

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text: hCoV-19/Switzerland/SG-CLM-10116412/2021

characteristic: organism

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text: restricted access

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text: hCoV-19/Switzerland/SG-CLM-10116459/2021

characteristic: sample capture status


characteristic: ENA-CHECKLIST

text: public

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

text: Yannick Gerth

characteristic: collector name

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text: SG

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text: hCoV-19/Switzerland/SG-CLM-10116935/2021

characteristic: isolate


characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

characteristic: GISAID Accession ID

text: public

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characteristic: geographic location (region and locality)

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text: restricted access

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text: hCoV-19/Switzerland/SG-CLM-10116979/2021

characteristic: organism

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characteristic: ENA-CHECKLIST

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text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/SG-CLM-10117115/2021

text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status


characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

characteristic: GISAID Accession ID

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text: SIB

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text: hCoV-19/Switzerland/SG-CLM-10117464/2021

characteristic: isolate

text: active surveillance in response to outbreak


characteristic: ENA-CHECKLIST

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text: SG

characteristic: geographic location (region and locality)

text: Human

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text: restricted access

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text: hCoV-19/Switzerland/SG-CLM-10117767/2021

characteristic: organism

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text: Yannick Gerth

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text: restricted access

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text: hCoV-19/Switzerland/SG-CLM-10119001/2021

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: INSDC center name

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text: public

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characteristic: collector name

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text: hCoV-19/Switzerland/SG-CLM-10119004/2021

characteristic: isolate


characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

characteristic: GISAID Accession ID

text: public

text: SIB

characteristic: collection date

text: Yannick Gerth

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characteristic: geographic location (country and/or sea)

text: SG

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

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text: hCoV-19/Switzerland/SG-CLM-10119030/2021

characteristic: organism

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text: Yannick Gerth

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text: Homo sapiens

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