characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

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text: public

text: Random sampling

text: IMS-10006-CVDP-CE706645-79DB-43BB-AF62-624D5AA36DC6

text: RKI-OSEDA

text: not provided

text: Germany

text: Europe/Germany/Saxony

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

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characteristic: title


status: PUBLIC

tag: attribute

text: Robert Koch Institute

characteristic: INSDC center name

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characteristic: INSDC status

characteristic: SRA accession

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characteristic: Sampling Strategy

text: IMS-10006-CVDP-3E2C047C-9B53-43CC-AA2A-CDB486744A0C

tag: Namespace:Robert Koch Institute

characteristic: Submitter Id

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characteristic: broker name

text: labopart - Medizinische Laboratorien Dresden, Wurzener Str. 5; 01127 Dresden

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Germany

characteristic: geographic location (country and/or sea)

text: Europe/Germany/Saxony

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

text: Molecular surveillance of SARS-CoV-2 in Germany


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Robert Koch Institute

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text: Random sampling

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text: RKI-OSEDA

text: not provided

text: Germany

text: Europe/Germany/Saxony

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


text: Robert Koch Institute

characteristic: INSDC center name

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text: Human

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text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Robert Koch Institute

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text: RKI-OSEDA

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characteristic: collector name

text: Germany

characteristic: geographic location (country and/or sea)

text: Europe/Germany/Saxony

characteristic: geographic location (region and locality)

text: Human

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characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SC

text: Lighthouse Lab in Milton Keynes

text: Samples prepared at Lighthouse Lab in Milton Keynes by The Lighthouse Lab in Milton Keynes and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

characteristic: description

text: United Kingdom

text: England

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characteristic: organism

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characteristic: SRA accession

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characteristic: broker name

text: Lighthouse Laboratory Plymouth

characteristic: collecting institution

characteristic: collection date

text: Samples prepared at Lighthouse Laboratory Plymouth by Lighthouse Laboratory Plymouth and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: England

text: Human


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: SC

text: Lighthouse Lab in Alderley Park

text: Samples prepared at Lighthouse Lab in Alderley Park by Jacquelyn Wynn, Mairead Hyland, The Lighthouse Lab in Alderley Park and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: Human


text: SC

characteristic: INSDC center name

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text: public

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text: Samples prepared at Berkshire and Surrey Pathology Services Lighthouse Laboratory by Berkshire and Surrey Pathology Services Lighthouse Laboratory and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

text: United Kingdom

text: England

text: Human

characteristic: host scientific name


text: SC

text: public

characteristic: INSDC status

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text: Integrated Covid Hub North East

text: Samples prepared at Integrated Covid Hub North East by Integrated Covid Hub North East and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

characteristic: description

text: United Kingdom

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text: Lighthouse Lab in Alderley Park

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

characteristic: geographic location (region and locality)

text: Human


text: SC

characteristic: INSDC center name

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text: Lighthouse Lab in Milton Keynes

text: United Kingdom

text: Scotland

text: Human

characteristic: host scientific name


text: SC

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characteristic: INSDC status

text: SC

text: Health Services Laboratories

text: Samples prepared at Health Services Laboratories by Health Services Laboratories and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

characteristic: description

text: United Kingdom

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characteristic: organism

characteristic: sample capture status


characteristic: ENA-CHECKLIST

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characteristic: title


text: SC

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characteristic: Submitter Id

text: SC

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text: Lighthouse Lab in Glasgow

characteristic: collecting institution

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text: Samples prepared at Lighthouse Lab in Glasgow by Harper VanSteenhouse, Yumi Kasai, David Gray, Carol Clugston, Anna Dominiczak and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

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characteristic: geographic location (country and/or sea)

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characteristic: geographic location (region and locality)

text: Human


text: MPIPZ

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characteristic: geographic location (latitude)

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characteristic: investigation type

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text: Shared features between the Chlamydomonas and Arabidopsis microbiota

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text: gnotobox

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characteristic: geographic location (latitude)

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characteristic: ENA-CHECKLIST

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text: MPIPZ

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text: public

text: Chlamydomonas sp. (1030)

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text: flask

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text: Chlamydomonas sp. (1030)

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text: Germany

characteristic: geographic location (country and/or sea)

text: metagenome

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text: phycosphere metagenome

text: MiSeq


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPIPZ

characteristic: INSDC center name

text: public

text: Microthamnion sp. (1108)

text: temperate terrestrial ecosystem

text: flask

text: Microthamnion sp. (1108)

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

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text: MPIPZ

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characteristic: INSDC status

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characteristic: Submitter Id

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text: Klebsormidium sp. (1121)

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characteristic: title


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text: MPIPZ

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text: public

text: Spirogloea muscicola

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text: metagenome

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characteristic: ENA-CHECKLIST

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text: MPIPZ

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text: Chlamydomonas reinhardtii

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characteristic: geographic location (latitude)

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text: metagenome

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text: phycosphere metagenome

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characteristic: ENA-LAST-UPDATE

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text: MPIPZ

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characteristic: INSDC status

characteristic: SRA accession

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text: Unplanted

characteristic: description

text: temperate terrestrial ecosystem

text: flask

text: Uninoculated

text: Germany

text: metagenome

text: phycosphere metagenome

characteristic: organism

text: phycosphere metagenome

text: MiSeq

characteristic: title


characteristic: ENA-CHECKLIST

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text: SC

characteristic: INSDC first public

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text: public

text: SC

characteristic: broker name

text: Lighthouse Lab in Milton Keynes

characteristic: collecting institution

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: Human

characteristic: host scientific name

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characteristic: ENA-LAST-UPDATE

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text: SC

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text: Lighthouse Lab in Alderley Park

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text: SC

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characteristic: SRA accession

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text: Lighthouse Lab in Milton Keynes

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characteristic: ENA-CHECKLIST

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text: Lighthouse Lab in Alderley Park

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characteristic: organism

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text: Lighthouse Lab in Glasgow

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text: Lighthouse Lab in Glasgow

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characteristic: geographic location (country and/or sea)

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characteristic: SRA accession

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text: United Kingdom

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text: Lighthouse Laboratory Plymouth

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text: Lighthouse Laboratory Plymouth

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characteristic: SRA accession

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characteristic: ENA-CHECKLIST

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text: Integrated Covid Hub North East

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text: Integrated Covid Hub North East

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characteristic: geographic location (country and/or sea)

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text: Lighthouse Lab in Milton Keynes

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characteristic: SRA accession

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text: Lighthouse Lab in Milton Keynes

characteristic: collection date

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characteristic: ENA-CHECKLIST

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text: Lighthouse Lab in Alderley Park

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text: SC

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text: SC

text: Lighthouse Lab in Alderley Park

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characteristic: geographic location (country and/or sea)

text: Wales

characteristic: geographic location (region and locality)

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characteristic: host scientific name

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characteristic: SRA accession

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text: Lighthouse Laboratory Plymouth

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characteristic: host scientific name

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characteristic: SRA accession

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text: Lighthouse Laboratory Plymouth

characteristic: collection date

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text: United Kingdom

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text: Human


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CEBITEC

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text: Mesophilic and Thermophilic Anaerobic Digestion of Wheat Straw in a CSTR-System with ‘Synthetic Manure’: Impact of Nickel and Tungsten on Methane Yields, Cell Counts, and Microbiome

text: metagenome

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text: NVRL

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text: Irish Consortium for Sequencing Covid

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text: not provided

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text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Meath

unit: year

characteristic: host age

text: human

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text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: Severe acute respiratory syndrome coronavirus 2

text: hCoV-19/Ireland/MH-NVRL-S21IRL00251326/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

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text: public

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characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: active surveillance in response to outbreak

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text: NVRL

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text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Meath

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/MH-NVRL-S21IRL00254288/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S21IRL00412039/2021

characteristic: virus identifier


text: NVRL

characteristic: INSDC first public

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text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Donegal

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: sample capture status

text: hCoV-19/Ireland/DL-NVRL-S21IRL00343103/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

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characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-S21IRL00348878/2021

characteristic: title


text: NVRL

characteristic: INSDC first public

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text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Limerick

characteristic: host age

text: human

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text: not provided

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text: Homo sapiens

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/LK-NVRL-S21IRL00373410/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

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characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S21IRL00396177/2021


text: NVRL

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characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: host age

text: human

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text: not provided

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text: Homo sapiens

text: female

characteristic: host sex

text: not provided

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text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/CO-NVRL-S21IRL00396781/2021

characteristic: title


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: NVRL

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text: public

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characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Wicklow

characteristic: geographic location (region and locality)

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/WW-NVRL-S21IRL00383239/2021

characteristic: virus identifier


text: NVRL

characteristic: INSDC first public

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text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

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text: not provided

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text: Homo sapiens

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S21IRL00326374/2021


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: NVRL

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text: public

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characteristic: SRA accession

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S21IRL00387086/2021

characteristic: title


text: NVRL

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Mayo

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/MO-NVRL-M21IRL00276190/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-M21IRL00312993/2021


text: NVRL

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/CE-NVRL-M21IRL00310173/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Limerick

characteristic: geographic location (region and locality)

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/LK-NVRL-M21IRL00310877/2021

characteristic: virus identifier


text: NVRL

characteristic: INSDC first public

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text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Limerick

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status

text: hCoV-19/Ireland/LK-NVRL-M21IRL00310861/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: active surveillance in response to outbreak

text: hCoV-19/Ireland/D-NVRL-M21IRL00313552/2021

characteristic: title


text: NVRL

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Limerick

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/LK-NVRL-M21IRL00310885/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

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characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Mayo

characteristic: geographic location (region and locality)

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/MO-NVRL-M21IRL00276006/2021


text: NVRL

characteristic: INSDC first public

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text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/D-NVRL-M21IRL00301005/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

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text: public

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characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Roscommon

characteristic: geographic location (region and locality)

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/RN-NVRL-M21IRL00311111/2021

characteristic: virus identifier


text: NVRL

characteristic: INSDC first public

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text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-M21IRL00300998/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-M21IRL00301016/2021

characteristic: title


text: NVRL

characteristic: INSDC first public

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text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Mayo

characteristic: host age

text: human

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text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/MO-NVRL-M21IRL00275985/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-M21IRL00301015/2021


text: NVRL

characteristic: INSDC first public

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text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

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text: not provided

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text: Homo sapiens

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/D-NVRL-M21IRL00300992/2021

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

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characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/TA-NVRL-M21IRL00311855/2021

characteristic: virus identifier


text: NVRL

characteristic: INSDC first public

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text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Leitrim

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: sample capture status

text: hCoV-19/Ireland/LM-NVRL-M21IRL00275146/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Mayo

characteristic: geographic location (region and locality)

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/MO-NVRL-M21IRL00274616/2021

characteristic: title


text: NVRL

characteristic: INSDC first public

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text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

characteristic: host age

text: human

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text: not provided

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text: Homo sapiens

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: Severe acute respiratory syndrome coronavirus 2

text: hCoV-19/Ireland/TA-NVRL-M21IRL00311833/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Leitrim

characteristic: geographic location (region and locality)

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: active surveillance in response to outbreak

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text: hCoV-19/Ireland/LM-NVRL-M21IRL00275140/2021


text: NVRL

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characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Donegal

characteristic: host age

text: human

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text: not provided

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text: Homo sapiens

text: male

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text: not provided

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/DL-NVRL-M21IRL00311621/2021

characteristic: title


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text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Donegal

characteristic: geographic location (region and locality)

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: Oro-Nasopharyngeal swab

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characteristic: virus identifier


text: NVRL

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text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Mayo

characteristic: host age

text: human

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text: not provided

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text: female

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text: not provided

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text: hCoV-19/Ireland/MO-NVRL-M21IRL00274634/2021


characteristic: ENA-CHECKLIST

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text: not provided

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text: Ireland

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text: Europe / Ireland / Kerry

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text: human

text: not provided

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characteristic: title


text: NVRL

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characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

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text: human

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text: not provided

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text: Ireland

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text: Europe / Ireland / Kerry

characteristic: geographic location (region and locality)

text: human

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text: Homo sapiens

characteristic: host scientific name

text: female

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text: NVRL

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characteristic: geographic location (longitude)

text: Europe / Ireland / Mayo

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text: hCoV-19/Ireland/MO-NVRL-M21IRL00274649/2021

characteristic: title


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text: Ireland

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text: Europe / Ireland / Leitrim

characteristic: geographic location (region and locality)

text: human

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text: Homo sapiens

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text: not provided

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characteristic: virus identifier


text: NVRL

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characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

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text: human

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text: not provided

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text: hCoV-19/Ireland/D-NVRL-M21IRL00301026/2021


characteristic: ENA-CHECKLIST

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text: not provided

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text: Ireland

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text: Europe / Ireland / Kerry

characteristic: geographic location (region and locality)

text: human

text: not provided

text: Homo sapiens

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text: female

text: not provided

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text: hCoV-19/Ireland/KY-NVRL-M21IRL00310567/2021

characteristic: title


text: NVRL

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text: Human coronavirus 2019

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text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Mayo

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

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text: not provided

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text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

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text: hCoV-19/Ireland/D-NVRL-M21IRL00311549/2021


text: NVRL

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text: Europe / Ireland / Kerry

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text: Severe acute respiratory syndrome coronavirus 2

text: hCoV-19/Ireland/KY-NVRL-M21IRL00310736/2021

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text: Europe / Ireland / Tipperary

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text: Europe / Ireland / Leitrim

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text: hCoV-19/Ireland/LM-NVRL-M21IRL00275123/2021


characteristic: ENA-CHECKLIST

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text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

text: human

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text: Homo sapiens

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text: hCoV-19/Ireland/CE-NVRL-M21IRL00310065/2021

characteristic: title


text: NVRL

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text: Europe / Ireland / Tipperary

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text: Europe / Ireland / Kerry

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text: human

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text: hCoV-19/Ireland/KY-NVRL-M21IRL00310773/2021


text: NVRL

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text: Europe / Ireland / Mayo

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text: Europe / Ireland / Kerry

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text: NVRL

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text: Ireland

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text: Europe / Ireland / Tipperary

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text: hCoV-19/Ireland/TA-NVRL-M21IRL00311827/2021


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text: Europe / Ireland / Mayo

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characteristic: title


text: NVRL

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characteristic: geographic location (longitude)

text: Europe / Ireland / Kerry

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text: National Virus Reference Laboratory

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text: not provided

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text: Ireland

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text: Europe / Ireland / Mayo

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text: hCoV-19/Ireland/MO-NVRL-M21IRL00274640/2021


text: NVRL

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text: Europe / Ireland / Mayo

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text: National Virus Reference Laboratory

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text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

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text: Europe / Ireland / Limerick

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text: human

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text: NVRL

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text: Europe / Ireland / Clare

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text: Europe / Ireland / Limerick

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text: Ireland

characteristic: geographic location (latitude)

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text: Europe / Ireland / Mayo

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characteristic: virus identifier


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text: National Virus Reference Laboratory

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text: not provided

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text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

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text: human

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text: female

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characteristic: organism

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text: hCoV-19/Ireland/CO-NVRL-M21IRL00313003/2021


text: NVRL

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/CW-NVRL-M21IRL00315189/2021

characteristic: title


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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

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text: not provided

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text: Ireland

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text: Europe / Ireland / Galway

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characteristic: host scientific name

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text: hCoV-19/Ireland/G-NVRL-M21IRL00312522/2021

characteristic: virus identifier


text: NVRL

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text: Europe / Ireland / Dublin

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text: hCoV-19/Ireland/D-NVRL-M21IRL00299228/2021


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text: hCoV-19/Ireland/CO-NVRL-M21IRL00315389/2021

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text: Europe / Ireland / Kerry

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text: hCoV-19/Ireland/KY-NVRL-M21IRL00310847/2021

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characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/KY-NVRL-M21IRL00311194/2021


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text: Europe / Ireland / Limerick

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text: hCoV-19/Ireland/LK-NVRL-M21IRL00276264/2021

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text: not provided

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text: Europe / Ireland / Dublin

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characteristic: virus identifier


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text: Europe / Ireland / Limerick

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text: hCoV-19/Ireland/LK-NVRL-M21IRL00275502/2021


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text: National Virus Reference Laboratory

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text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

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text: Europe / Ireland / Limerick

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text: human

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text: Europe / Ireland / Tipperary

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text: Severe acute respiratory syndrome coronavirus 2

text: hCoV-19/Ireland/TA-NVRL-M21IRL00314476/2021

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text: Europe / Ireland / Kilkenny

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text: active surveillance in response to outbreak

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text: hCoV-19/Ireland/KK-NVRL-M21IRL00314839/2021


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text: Europe / Ireland / Kildare

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text: hCoV-19/Ireland/KE-NVRL-M21IRL00308431/2021

characteristic: title


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text: Europe / Ireland / Carlow

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characteristic: virus identifier


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text: Europe / Ireland / Carlow

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text: hCoV-19/Ireland/CW-NVRL-M21IRL00315187/2021


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text: Europe / Ireland / Limerick

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characteristic: host scientific name

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characteristic: organism

text: hCoV-19/Ireland/LK-NVRL-M21IRL00274737/2021

characteristic: title