text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 13356. San Raffaele Scientific Institute. 06MIL2172

value: Sensititre

value: susceptible

value: intermediate

value: moxifloxacin

value: bedaquiline


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: San Raffaele Scientific Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:San Raffaele Scientific Institute

characteristic: Submitter Id

text: NDM Oxford

characteristic: broker name

text: Mycobacterium

characteristic: genus

characteristic: isolate

text: Mycobacterium tuberculosis

characteristic: organism

text: Mycobacterium tuberculosis

text: 13348. San Raffaele Scientific Institute. 06MIL2173

characteristic: title

type: AMR curated data - CABBAGE

value: rifabutin

value: EUCAST

value: broth dilution

value: mg/L

value: resistant

value: Mycobacterium tuberculosis

value: amikacin

value: delamanid

value: cefpimizole

value: isoniazid

value: kanamycin

value: linezolid

value: ethambutol

value: levofloxacin


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 13344. San Raffaele Scientific Institute. 06MIL2174

value: Sensititre

value: susceptible

value: rifampin

value: ethionamide


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 13340. San Raffaele Scientific Institute. 06MIL2175

value: EUCAST

value: rifabutin

value: moxifloxacin

value: bedaquiline

value: intermediate


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 13284. San Raffaele Scientific Institute. 06MIL2176

value: broth dilution

value: mg/L

value: resistant

value: Mycobacterium tuberculosis

value: amikacin


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 13283. San Raffaele Scientific Institute. 06MIL2177

value: cefpimizole

value: kanamycin

value: linezolid

value: isoniazid

value: delamanid


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 13264. San Raffaele Scientific Institute. 06MIL2178

value: levofloxacin

value: Sensititre

value: susceptible

value: rifampin


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 13416. San Raffaele Scientific Institute. 06MIL2225

value: EUCAST

value: rifabutin

value: ethionamide

value: moxifloxacin

value: ethambutol


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 13282. San Raffaele Scientific Institute. 06MIL2226

value: broth dilution

value: mg/L

value: resistant

value: bedaquiline

value: intermediate


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 13338. San Raffaele Scientific Institute. 06MIL2227

value: cefpimizole

value: Mycobacterium tuberculosis

value: amikacin

value: linezolid

value: kanamycin


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 13373. San Raffaele Scientific Institute. 06MIL2228

value: Sensititre

value: susceptible

value: levofloxacin

value: isoniazid

value: delamanid


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 13289. San Raffaele Scientific Institute. 06MIL2229

value: EUCAST

value: rifabutin

value: rifampin

value: moxifloxacin


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 13410. San Raffaele Scientific Institute. 06MIL2230

value: ethambutol

value: broth dilution

value: mg/L

value: ethionamide


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 13413. San Raffaele Scientific Institute. 06MIL2231

value: resistant

value: Mycobacterium tuberculosis

value: bedaquiline

value: cefpimizole

value: intermediate


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 13411. San Raffaele Scientific Institute. 06MIL2232

value: Sensititre

value: susceptible

value: linezolid

value: amikacin

value: kanamycin


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 14022. San Raffaele Scientific Institute. 06MIL2233

value: EUCAST

value: rifabutin

value: delamanid

value: levofloxacin


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 14017. San Raffaele Scientific Institute. 06MIL2234

value: broth dilution

value: rifampin

value: moxifloxacin

value: isoniazid

value: ethambutol


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 13346. San Raffaele Scientific Institute. 06MIL2235

value: bedaquiline

value: mg/L

value: Mycobacterium tuberculosis

value: ethionamide


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 13279. San Raffaele Scientific Institute. 06MIL2236

value: Sensititre

value: susceptible

value: cefpimizole


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 14027. San Raffaele Scientific Institute. 06MIL2237

value: linezolid

value: kanamycin

value: amikacin

value: resistant


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 14034. San Raffaele Scientific Institute. 06MIL2238

value: EUCAST

value: levofloxacin

value: delamanid


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 14028. San Raffaele Scientific Institute. 06MIL2239

value: broth dilution

value: moxifloxacin

value: rifampin

value: rifabutin


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 13430. San Raffaele Scientific Institute. 06MIL2240

value: mg/L

value: isoniazid

value: ethambutol

value: bedaquiline


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 13266. San Raffaele Scientific Institute. 06MIL2241

value: Sensititre

value: susceptible

value: Mycobacterium tuberculosis

value: ethionamide


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 13426. San Raffaele Scientific Institute. 06MIL2242

value: cefpimizole

value: amikacin

value: kanamycin

value: linezolid


text: San Raffaele Scientific Institute

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: 13331. San Raffaele Scientific Institute. 06MIL2243

value: EUCAST

value: delamanid

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: AA04355761. CTB/NICD. AA04355761

value: broth dilution

value: moxifloxacin

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: BC01402523. CTB/NICD. BC01402523

value: mg/L

value: resistant

value: rifabutin

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: BC01431071. CTB/NICD. BC01431071

value: Sensititre

value: susceptible

value: ethambutol

value: bedaquiline


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: CC00435486. CTB/NICD. CC00435486

value: Mycobacterium tuberculosis

value: ethionamide

value: cefpimizole

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: KD01666167. CTB/NICD. KD01666167

value: EUCAST

value: kanamycin

value: linezolid

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: KD01683197. CTB/NICD. KD01683197

value: broth dilution

value: levofloxacin

value: moxifloxacin

value: intermediate

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: KG00479755. CTB/NICD. KG00479755

value: rifabutin

value: mg/L

value: Sensititre

value: resistant

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: MG03173285. CTB/NICD. MG03173285

value: ethionamide

value: susceptible

value: Mycobacterium tuberculosis

value: ethambutol

value: bedaquiline


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00100005. CTB/NICD. YA00100005

value: linezolid

value: EUCAST

value: cefpimizole

value: kanamycin

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: TD02467464. CTB/NICD. TD02467464


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: TD02516917. CTB/NICD. TD02516917

value: broth dilution

value: moxifloxacin

value: levofloxacin

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: TD02538000. CTB/NICD. TD02538000

value: mg/L

value: Sensititre

value: rifabutin

value: intermediate

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: TD02566481. CTB/NICD. TD02566481

value: ethionamide

value: susceptible

value: Mycobacterium tuberculosis

value: resistant

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: TD02570033. CTB/NICD. TD02570033

value: cefpimizole

value: EUCAST

value: bedaquiline

value: linezolid

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: TD02597418. CTB/NICD. TD02597418

value: broth dilution

value: levofloxacin

value: amikacin

value: moxifloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: H37Rv_SA2608. CTB/NICD. H37Rv_SA2608


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: TD02617471. CTB/NICD. TD02617471

value: mg/L

value: Sensititre

value: delamanid

value: rifabutin

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: TD02624032. CTB/NICD. TD02624032

value: ethionamide

value: intermediate

value: Mycobacterium tuberculosis

value: susceptible

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: TD02649443. CTB/NICD. TD02649443

value: EUCAST

value: resistant

value: cefpimizole

value: isoniazid

value: bedaquiline


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: TD02658803. CTB/NICD. TD02658803


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: TD02660918. CTB/NICD. TD02660918

value: broth dilution

value: linezolid

value: levofloxacin

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: TD02697065. CTB/NICD. TD02697065

value: moxifloxacin

value: mg/L

value: Sensititre

value: delamanid

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: TD02716965. CTB/NICD. TD02716965

value: Mycobacterium tuberculosis

value: rifabutin

value: ethionamide


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: TE00126253. CTB/NICD. TE00126253

value: EUCAST

value: susceptible

value: intermediate

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: UH01127093. CTB/NICD. UH01127093

value: rifampin

value: bedaquiline

value: cefpimizole

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: UH01130344. CTB/NICD. UH01130344

value: ethambutol

value: broth dilution

value: resistant

value: linezolid

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: UH01142796. CTB/NICD. UH01142796

value: mg/L

value: Sensititre

value: delamanid

value: moxifloxacin

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: UH01147160. CTB/NICD. UH01147160

value: EUCAST

value: susceptible

value: Mycobacterium tuberculosis

value: rifabutin

value: ethionamide


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: UH01161507. CTB/NICD. UH01161507

value: kanamycin

value: bedaquiline

value: rifampin

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: UH01187965. CTB/NICD. UH01187965

value: broth dilution

value: resistant

value: ethambutol

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: UH01206306. CTB/NICD. UH01206306

value: mg/L

value: Sensititre

value: intermediate

value: levofloxacin

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: UH01208742. CTB/NICD. UH01208742

value: EUCAST

value: susceptible

value: moxifloxacin

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: UH01216633. CTB/NICD. UH01216633

value: ethionamide

value: Mycobacterium tuberculosis

value: delamanid

value: rifabutin

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: WB00409604. CTB/NICD. WB00409604

value: broth dilution

value: resistant

value: rifampin

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: WB00420797. CTB/NICD. WB00420797

value: isoniazid

value: mg/L

value: Sensititre

value: ethambutol

value: bedaquiline


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: WB00426372. CTB/NICD. WB00426372

value: EUCAST

value: susceptible

value: linezolid

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: WB00438248. CTB/NICD. WB00438248

value: Mycobacterium tuberculosis

value: amikacin

value: moxifloxacin

value: ethionamide


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: WG00243792. CTB/NICD. WG00243792

value: broth dilution

value: intermediate

value: rifabutin

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: WK00312077. CTB/NICD. WK00312077

value: resistant

value: kanamycin

value: rifampin

value: isoniazid

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XB00637592. CTB/NICD. XB00637592

value: EUCAST

value: mg/L

value: Sensititre

value: bedaquiline

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XB00680996. CTB/NICD. XB00680996

value: amikacin

value: Mycobacterium tuberculosis

value: susceptible

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XD01908331. CTB/NICD. XD01908331

value: broth dilution

value: levofloxacin

value: moxifloxacin

value: ethionamide


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XD01920413. CTB/NICD. XD01920413

value: resistant

value: intermediate

value: rifabutin

value: kanamycin

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XD01940328. CTB/NICD. XD01940328

value: EUCAST

value: mg/L

value: isoniazid

value: rifampin

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XD01977268. CTB/NICD. XD01977268

value: Sensititre

value: Mycobacterium tuberculosis

value: bedaquiline

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XD02001919. CTB/NICD. XD02001919

value: broth dilution

value: susceptible

value: levofloxacin

value: linezolid

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XD02077323. CTB/NICD. XD02077323

value: resistant

value: moxifloxacin

value: rifabutin

value: ethionamide


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XD02077335. CTB/NICD. XD02077335

value: EUCAST

value: mg/L

value: delamanid

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XD02092703. CTB/NICD. XD02092703


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XD02095892. CTB/NICD. XD02095892


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XD02104034. CTB/NICD. XD02104034

value: Sensititre

value: isoniazid

value: cefpimizole

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XD02142052. CTB/NICD. XD02142052

value: bedaquiline

value: broth dilution

value: Mycobacterium tuberculosis


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XD02156639. CTB/NICD. XD02156639

value: susceptible

value: levofloxacin

value: amikacin

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XD02207830. CTB/NICD. XD02207830

value: resistant

value: ethambutol

value: intermediate

value: moxifloxacin

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XD02208983. CTB/NICD. XD02208983

value: kanamycin

value: EUCAST

value: mg/L

value: ethionamide

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00100087. CTB/NICD. YA00100087

value: Sensititre

value: cefpimizole

value: bedaquiline

value: isoniazid

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00100101. CTB/NICD. YA00100101

value: broth dilution

value: susceptible

value: Mycobacterium tuberculosis

value: levofloxacin

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00117684. CTB/NICD. YA00117684

value: moxifloxacin

value: ethambutol

value: resistant

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00056557. CTB/NICD. YA00056557

value: EUCAST

value: mg/L

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00099899. CTB/NICD. YA00099899

value: kanamycin

value: Sensititre

value: ethionamide

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00099923. CTB/NICD. YA00099923

value: rifampin

value: cefpimizole

value: isoniazid

value: bedaquiline


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00099990. CTB/NICD. YA00099990

value: broth dilution

value: susceptible

value: Mycobacterium tuberculosis

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00100002. CTB/NICD. YA00100002

value: amikacin

value: moxifloxacin

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00100012. CTB/NICD. YA00100012

value: EUCAST

value: mg/L

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00100018. CTB/NICD. YA00100018

value: Sensititre

value: rifabutin

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00100075. CTB/NICD. YA00100075

value: resistant

value: ethionamide

value: delamanid

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00100081. CTB/NICD. YA00100081

value: cefpimizole

value: broth dilution

value: isoniazid

value: bedaquiline

value: intermediate


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00100092. CTB/NICD. YA00100092

value: moxifloxacin

value: susceptible

value: Mycobacterium tuberculosis

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00100107. CTB/NICD. YA00100107

value: EUCAST

value: mg/L

value: ethambutol

value: linezolid

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00104948. CTB/NICD. YA00104948

value: ethionamide

value: Sensititre

value: resistant

value: kanamycin

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00104949. CTB/NICD. YA00104949

value: broth dilution

value: cefpimizole

value: rifampin

value: isoniazid

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00136698. CTB/NICD. YA00136698

value: Mycobacterium tuberculosis

value: susceptible

value: moxifloxacin

value: bedaquiline


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00106077. CTB/NICD. YA00106077

value: EUCAST

value: mg/L

value: levofloxacin

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00106922. CTB/NICD. YA00106922

value: Sensititre

value: ethionamide

value: linezolid

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00106923. CTB/NICD. YA00106923

value: broth dilution

value: resistant

value: intermediate

value: rifabutin

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00118600. CTB/NICD. YA00118600


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125758. CTB/NICD. YA00125758

value: Mycobacterium tuberculosis

value: isoniazid

value: delamanid

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125763. CTB/NICD. YA00125763

value: EUCAST

value: bedaquiline

value: susceptible

value: cefpimizole

value: moxifloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125775. CTB/NICD. YA00125775

value: mg/L

value: Sensititre

value: ethambutol

value: ethionamide

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125779. CTB/NICD. YA00125779


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125783. CTB/NICD. YA00125783

value: broth dilution

value: resistant

value: linezolid

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125788. CTB/NICD. YA00125788

value: Mycobacterium tuberculosis

value: isoniazid

value: kanamycin

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125802. CTB/NICD. YA00125802

value: bedaquiline

value: EUCAST

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125807. CTB/NICD. YA00125807

value: susceptible

value: moxifloxacin

value: rifampin

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125812. CTB/NICD. YA00125812

value: mg/L

value: Sensititre

value: ethambutol

value: ethionamide


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125815. CTB/NICD. YA00125815

value: broth dilution

value: levofloxacin

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125818. CTB/NICD. YA00125818

value: Mycobacterium tuberculosis

value: amikacin

value: isoniazid

value: resistant


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125828. CTB/NICD. YA00125828

value: EUCAST

value: rifabutin

value: bedaquiline

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125839. CTB/NICD. YA00125839

value: delamanid

value: susceptible

value: moxifloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125840. CTB/NICD. YA00125840

value: mg/L

value: Sensititre

value: cefpimizole

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125841. CTB/NICD. YA00125841

value: broth dilution

value: ethambutol

value: ethionamide

value: intermediate

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125842. CTB/NICD. YA00125842

value: Mycobacterium tuberculosis

value: isoniazid

value: resistant

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125843. CTB/NICD. YA00125843

value: EUCAST

value: amikacin

value: rifabutin

value: bedaquiline

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125844. CTB/NICD. YA00125844

value: mg/L

value: Sensititre

value: susceptible

value: moxifloxacin

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125856. CTB/NICD. YA00125856

value: cefpimizole

value: broth dilution

value: rifampin

value: ethionamide

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125857. CTB/NICD. YA00125857

value: Mycobacterium tuberculosis

value: isoniazid

value: resistant

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125871. CTB/NICD. YA00125871

value: EUCAST

value: rifabutin

value: amikacin

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125875. CTB/NICD. YA00125875

value: mg/L

value: Sensititre

value: kanamycin

value: bedaquiline


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125878. CTB/NICD. YA00125878

value: delamanid

value: susceptible

value: moxifloxacin

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00125973. CTB/NICD. YA00125973

value: broth dilution

value: ethionamide

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126205. CTB/NICD. YA00126205

value: Mycobacterium tuberculosis

value: resistant

value: rifampin

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126213. CTB/NICD. YA00126213

value: rifabutin

value: EUCAST

value: levofloxacin

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126219. CTB/NICD. YA00126219

value: mg/L

value: Sensititre

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126224. CTB/NICD. YA00126224

value: susceptible

value: delamanid

value: kanamycin

value: bedaquiline


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126229. CTB/NICD. YA00126229

value: broth dilution

value: ethionamide

value: moxifloxacin

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126230. CTB/NICD. YA00126230

value: Mycobacterium tuberculosis

value: resistant

value: ethambutol

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126234. CTB/NICD. YA00126234

value: EUCAST

value: rifabutin

value: levofloxacin

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: H37Rv_SA2609. CTB/NICD. H37Rv_SA2609


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126240. CTB/NICD. YA00126240

value: mg/L

value: Sensititre

value: linezolid

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126249. CTB/NICD. YA00126249


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126261. CTB/NICD. YA00126261

value: susceptible

value: kanamycin

value: bedaquiline

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126270. CTB/NICD. YA00126270

value: broth dilution

value: moxifloxacin

value: cefpimizole

value: ethionamide


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126277. CTB/NICD. YA00126277

value: Mycobacterium tuberculosis

value: resistant

value: rifampin

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126283. CTB/NICD. YA00126283

value: EUCAST

value: levofloxacin

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126290. CTB/NICD. YA00126290

value: mg/L

value: Sensititre

value: linezolid

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126304. CTB/NICD. YA00126304

value: susceptible

value: kanamycin

value: bedaquiline

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126312. CTB/NICD. YA00126312

value: moxifloxacin

value: broth dilution

value: cefpimizole

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126317. CTB/NICD. YA00126317

value: Mycobacterium tuberculosis

value: ethionamide

value: resistant

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126322. CTB/NICD. YA00126322

value: EUCAST

value: isoniazid

value: levofloxacin

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126335. CTB/NICD. YA00126335

value: mg/L

value: Sensititre

value: linezolid

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126354. CTB/NICD. YA00126354

value: bedaquiline

value: susceptible

value: amikacin

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126361. CTB/NICD. YA00126361

value: broth dilution

value: moxifloxacin

value: delamanid

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126368. CTB/NICD. YA00126368

value: Mycobacterium tuberculosis

value: resistant

value: intermediate

value: ethionamide

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126373. CTB/NICD. YA00126373

value: EUCAST

value: mg/L

value: isoniazid

value: ethambutol

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126380. CTB/NICD. YA00126380

value: Sensititre

value: susceptible

value: linezolid

value: rifabutin

value: bedaquiline


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126387. CTB/NICD. YA00126387

value: moxifloxacin

value: broth dilution

value: amikacin

value: delamanid

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126401. CTB/NICD. YA00126401

value: Mycobacterium tuberculosis

value: ethionamide

value: resistant

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126408. CTB/NICD. YA00126408

value: EUCAST

value: mg/L

value: isoniazid

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126415. CTB/NICD. YA00126415

value: Sensititre

value: susceptible

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126436. CTB/NICD. YA00126436

value: linezolid

value: rifabutin

value: intermediate

value: bedaquiline

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126777. CTB/NICD. YA00126777

value: broth dilution

value: delamanid

value: amikacin

value: kanamycin

value: moxifloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126780. CTB/NICD. YA00126780

value: EUCAST

value: Mycobacterium tuberculosis

value: ethionamide


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126801. CTB/NICD. YA00126801

value: mg/L

value: rifampin

value: isoniazid

value: resistant


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126806. CTB/NICD. YA00126806

value: Sensititre

value: susceptible

value: ethambutol

value: linezolid

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126812. CTB/NICD. YA00126812

value: bedaquiline

value: broth dilution

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00126819. CTB/NICD. YA00126819

value: intermediate

value: kanamycin

value: levofloxacin

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00127170. CTB/NICD. YA00127170

value: EUCAST

value: Mycobacterium tuberculosis

value: delamanid

value: moxifloxacin

value: ethionamide


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00127172. CTB/NICD. YA00127172


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00127801. CTB/NICD. YA00127801

value: mg/L

value: Sensititre

value: resistant

value: rifampin

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00127802. CTB/NICD. YA00127802

value: susceptible

value: ethambutol

value: linezolid

value: bedaquiline

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00127803. CTB/NICD. YA00127803

value: broth dilution

value: kanamycin

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00127806. CTB/NICD. YA00127806

value: EUCAST

value: Mycobacterium tuberculosis

value: rifabutin

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00127808. CTB/NICD. YA00127808

value: mg/L

value: moxifloxacin

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00127809. CTB/NICD. YA00127809

value: Sensititre

value: resistant

value: rifampin

value: ethionamide


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00127811. CTB/NICD. YA00127811

value: linezolid

value: susceptible

value: ethambutol

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00127813. CTB/NICD. YA00127813

value: broth dilution

value: kanamycin

value: cefpimizole

value: bedaquiline


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00127816. CTB/NICD. YA00127816

value: EUCAST

value: Mycobacterium tuberculosis

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00127818. CTB/NICD. YA00127818

value: mg/L

value: amikacin

value: rifabutin

value: moxifloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00127820. CTB/NICD. YA00127820

value: Sensititre

value: resistant

value: rifampin

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00127822. CTB/NICD. YA00127822

value: susceptible

value: ethionamide

value: intermediate

value: linezolid

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00127823. CTB/NICD. YA00127823

value: broth dilution

value: kanamycin

value: bedaquiline

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00127824. CTB/NICD. YA00127824

value: EUCAST

value: mg/L

value: Mycobacterium tuberculosis

value: cefpimizole

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128251. CTB/NICD. YA00128251

value: amikacin

value: Sensititre

value: resistant

value: rifabutin

value: moxifloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128254. CTB/NICD. YA00128254

value: susceptible

value: ethionamide

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128258. CTB/NICD. YA00128258

value: broth dilution

value: ethambutol

value: rifampin

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128263. CTB/NICD. YA00128263

value: EUCAST

value: isoniazid

value: intermediate

value: kanamycin

value: bedaquiline


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128268. CTB/NICD. YA00128268

value: mg/L

value: Mycobacterium tuberculosis

value: amikacin

value: levofloxacin

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128272. CTB/NICD. YA00128272

value: Sensititre

value: susceptible

value: rifabutin

value: moxifloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128278. CTB/NICD. YA00128278

value: broth dilution

value: resistant

value: ethambutol

value: ethionamide

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128281. CTB/NICD. YA00128281

value: EUCAST

value: linezolid

value: isoniazid

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128286. CTB/NICD. YA00128286

value: mg/L

value: Mycobacterium tuberculosis

value: intermediate

value: bedaquiline

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128289. CTB/NICD. YA00128289

value: Sensititre

value: susceptible

value: levofloxacin

value: cefpimizole

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128294. CTB/NICD. YA00128294

value: broth dilution

value: rifabutin

value: resistant

value: moxifloxacin

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128300. CTB/NICD. YA00128300

value: delamanid

value: EUCAST

value: isoniazid

value: ethionamide


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128310. CTB/NICD. YA00128310

value: rifampin

value: mg/L

value: Mycobacterium tuberculosis

value: intermediate

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128316. CTB/NICD. YA00128316

value: Sensititre

value: susceptible

value: kanamycin

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128323. CTB/NICD. YA00128323

value: cefpimizole

value: broth dilution

value: rifabutin

value: amikacin

value: bedaquiline


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128326. CTB/NICD. YA00128326

value: EUCAST

value: delamanid

value: moxifloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128335. CTB/NICD. YA00128335

value: resistant

value: rifampin

value: isoniazid

value: ethionamide


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128339. CTB/NICD. YA00128339

value: mg/L

value: Mycobacterium tuberculosis

value: ethambutol

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128349. CTB/NICD. YA00128349

value: levofloxacin

value: Sensititre

value: susceptible

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128355. CTB/NICD. YA00128355

value: broth dilution

value: amikacin

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128359. CTB/NICD. YA00128359

value: EUCAST

value: delamanid

value: bedaquiline

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128361. CTB/NICD. YA00128361

value: moxifloxacin

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128984. CTB/NICD. YA00128984

value: mg/L

value: resistant

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128986. CTB/NICD. YA00128986

value: Mycobacterium tuberculosis

value: linezolid

value: ethambutol

value: ethionamide


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128989. CTB/NICD. YA00128989

value: Sensititre

value: susceptible

value: kanamycin

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128992. CTB/NICD. YA00128992

value: EUCAST

value: broth dilution

value: amikacin

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00128997. CTB/NICD. YA00128997

value: bedaquiline

value: delamanid

value: moxifloxacin

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00129000. CTB/NICD. YA00129000

value: mg/L

value: resistant

value: isoniazid

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00129005. CTB/NICD. YA00129005

value: ethionamide

value: Mycobacterium tuberculosis

value: linezolid

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00129009. CTB/NICD. YA00129009

value: Sensititre

value: susceptible

value: kanamycin

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00129011. CTB/NICD. YA00129011

value: EUCAST

value: broth dilution

value: cefpimizole

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00129012. CTB/NICD. YA00129012

value: moxifloxacin

value: rifabutin

value: bedaquiline

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00129017. CTB/NICD. YA00129017

value: isoniazid

value: mg/L

value: resistant

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00129020. CTB/NICD. YA00129020

value: Mycobacterium tuberculosis

value: ethambutol

value: linezolid

value: ethionamide


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00129021. CTB/NICD. YA00129021

value: Sensititre

value: susceptible

value: kanamycin

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00129022. CTB/NICD. YA00129022

value: amikacin

value: EUCAST

value: broth dilution

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00129023. CTB/NICD. YA00129023

value: rifabutin

value: delamanid

value: moxifloxacin

value: bedaquiline


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00129024. CTB/NICD. YA00129024

value: mg/L

value: isoniazid

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00129027. CTB/NICD. YA00129027

value: ethambutol

value: Mycobacterium tuberculosis

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00129028. CTB/NICD. YA00129028

value: Sensititre

value: susceptible

value: resistant

value: ethionamide

value: intermediate


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00129030. CTB/NICD. YA00129030

value: amikacin

value: EUCAST

value: broth dilution

value: levofloxacin

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00129031. CTB/NICD. YA00129031

value: moxifloxacin

value: bedaquiline

value: cefpimizole

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: H37Rv_SA2610. CTB/NICD. H37Rv_SA2610


text: Universidad Peruana Cayetano Heredia

text: public

tag: Namespace:Universidad Peruana Cayetano Heredia

text: NDM Oxford

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: H37Rv_PR2700. Universidad Peruana Cayetano Heredia. H37Rv_PR2700


text: OXFORD

text: public

unit: week

characteristic: age

text: ArrayExpress

text: house mouse

characteristic: common name

text: Protocols: Lgr5+ cells in the ApcMin;Lgr5DTR mice were ablated with a single intraperitoneal dose of Diphtheria Toxin (DT) (Cat # 322326-1mg, Merck) in saline (50 μg kg−1). The ApcMin;Lgr5DTR mice were culled 24 hours and 5 days post DT. Untreated ApcMin control mice were aged until symptomatic, then culled. Mice were approximately 4 months of age. The entire intestinal tract was removed and divided into small intestine (proximal, middle and distal) and colon. The intestines were flushed with PBS, opened longitudinally using a gut preparation apparatus (Rudling et al 2006). For fresh frozen samples, individual polyps were cut out with a scalpel and snap frozen in liquid nitrogen for subsequent RNA extraction. The remaining tissue was fixed overnight in 10% neutral buffered formalin (Merck) and processed into FFPE blocks for subsequent histological analysis. For FFPE samples, the tissue was fixed overnight in 10% neutral buffered formalin (Merck) and processed into FFPE blocks. 4um sections were cut and H and E stained to identify polyps. Tissue from identified polyps were removed from deparaffinised slides with a needle and collected. For fresh frozen samples, RNA was extracted using the RNeasy Micro Kit from Qiagen (74004) and DNase treatment was performed using the DNA-free kit from Life Technologies (AM1906). For FFPE samples, RNA was extracted using the High Pure FFPET RNA Isolation Kit (Roche). 3'RNAseq libraries were prepared using the QuantSeq 3' mRNA-Seq FWD Library Prep Kit (Lexogen, Austria). RNA input varying from 20-1000ng and 14-20 PCR cycles were used. Library quality and quantity were assessed using the HS 1000 DNA TapeStation (Agilent) and DNA High Sensitivity Qubit Assay (ThermoFisher) respectively.

characteristic: description

text: adult

characteristic: developmental stage

text: intestinal polyp

characteristic: disease

text: Apcmin

characteristic: genotype

characteristic: individual

text: Mus musculus

text: Mus musculus

text: jejunum

characteristic: organism part

text: neoplasm

characteristic: sampling site

text: Mus musculus

text: female

characteristic: sex

text: paraffin specimen

characteristic: specimen with known storage state

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: OXFORD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: house mouse

text: adult

text: intestinal polyp

text: Apcmin

text: Mus musculus

text: Mus musculus

text: duodenum

text: neoplasm

text: Mus musculus

text: male

text: paraffin specimen


text: OXFORD

text: public

characteristic: age

text: ArrayExpress

text: house mouse

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: intestinal polyp

characteristic: disease

text: Apcmin

characteristic: genotype

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: jejunum

text: neoplasm

text: Mus musculus

text: male

text: paraffin specimen

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: OXFORD

text: public

text: ArrayExpress

text: house mouse

text: adult

text: intestinal polyp

text: Apcmin

text: Mus musculus

text: Mus musculus

text: duodenum

characteristic: organism part

text: neoplasm

characteristic: sampling site

text: Mus musculus

text: female

characteristic: sex

text: paraffin specimen

characteristic: specimen with known storage state

characteristic: strain


text: OXFORD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: adult

text: intestinal polyp

text: Apcmin

text: Mus musculus

text: Mus musculus

text: colon

text: neoplasm

text: Mus musculus

text: male

text: paraffin specimen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: OXFORD

text: public

text: ArrayExpress

text: house mouse

characteristic: description

text: adult

characteristic: developmental stage

text: intestinal polyp

characteristic: disease

text: Apcmin

characteristic: genotype

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: ileum

text: neoplasm

text: Mus musculus

text: male

text: paraffin specimen

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: OXFORD

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: house mouse

text: adult

text: intestinal polyp

text: Mus musculus

text: Mus musculus

text: duodenum

characteristic: organism part

text: neoplasm

characteristic: sampling site

text: Mus musculus

text: male

characteristic: sex

text: frozen specimen

characteristic: specimen with known storage state

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: OXFORD

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: adult

text: intestinal polyp

text: Mus musculus

text: Mus musculus

text: ileum

text: neoplasm

text: Mus musculus

text: male

text: frozen specimen


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: OXFORD

text: public

text: ArrayExpress

text: house mouse

characteristic: description

text: adult

characteristic: developmental stage

text: intestinal polyp

characteristic: disease

text: Apcmin

characteristic: genotype

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: duodenum

text: neoplasm

text: Mus musculus

text: female

text: frozen specimen

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: OXFORD

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: house mouse

text: adult

text: intestinal polyp

text: Apcmin

text: Mus musculus

text: Mus musculus

text: jejunum

characteristic: organism part

text: neoplasm

characteristic: sampling site

text: Mus musculus

text: female

characteristic: sex

text: frozen specimen

characteristic: specimen with known storage state

characteristic: strain


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: OXFORD

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: adult

text: intestinal polyp

text: Mus musculus

text: Mus musculus

text: duodenum

text: neoplasm

text: Mus musculus

text: female

text: frozen specimen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: OXFORD

text: public

text: ArrayExpress

text: house mouse

characteristic: description

text: adult

characteristic: developmental stage

text: intestinal polyp

characteristic: disease

characteristic: genotype

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: jejunum

text: neoplasm

text: Mus musculus

text: male

text: frozen specimen

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: OXFORD

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: house mouse

text: adult

text: intestinal polyp

text: Mus musculus

text: Mus musculus

text: colon

characteristic: organism part

text: neoplasm

characteristic: sampling site

text: Mus musculus

text: male

characteristic: sex

text: frozen specimen

characteristic: specimen with known storage state

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: OXFORD

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: adult

text: intestinal polyp

text: Apcmin

text: Mus musculus

text: Mus musculus

text: duodenum

text: neoplasm

text: Mus musculus

text: male

text: frozen specimen


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: OXFORD

text: public

text: ArrayExpress

text: house mouse

characteristic: description

text: adult

characteristic: developmental stage

text: intestinal polyp

characteristic: disease

text: Apcmin

characteristic: genotype

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: jejunum

text: neoplasm

text: Mus musculus

text: male

text: frozen specimen

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: GxABT - ULiege

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:GxABT - ULiege

text: pig

text: CON

text: Sus scrofa

text: Sus scrofa


text: GxABT - ULiege

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: pig

text: Sus scrofa

text: Sus scrofa


characteristic: ENA-LAST-UPDATE

text: FREE UNIVERSITY OF BERLIN

text: public

tag: Namespace:FREE UNIVERSITY OF BERLIN

characteristic: collection date

text: Twenty root pieces of <2 mm diameter were separated from the organic layer of the forest floor. The sample was extracted with a soil core.

text: Tropical montane woodland

characteristic: environment (biome)

text: Slope

characteristic: environment (feature)

text: soil organic matter

characteristic: environment (material)

text: urea (50 kg of N ha-1 y-1) and monosodium phosphate (10 kg P ha-1 y-1) for 7 years

characteristic: fertilizer regimen

unit: m

characteristic: geographic location (altitude)

text: Ecuador

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Zamora-Chinchipe

characteristic: geographic location (region and locality)

text: plant

characteristic: host common name

text: eukaryote

characteristic: investigation type

text: mutualism

characteristic: observed biotic relationship

text: Spermatophyta environmental sample

characteristic: organism count

text: fine root

characteristic: plant body site

text: plant-associated

characteristic: plant-associated environmental package

text: Reponse of root associated fungi to fertilization

characteristic: project name

text: Soil core

characteristic: sample collection device or method

unit: °C

characteristic: sample storage temperature

text: Spermatophyta environmental sample

text: Illumuna MiSeq 2 x 250 bp

characteristic: sequencing method

text: mixed root sample

text: phototroph

characteristic: trophic level


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FREE UNIVERSITY OF BERLIN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: Tropical montane woodland

characteristic: environment (biome)

text: Slope

characteristic: environment (feature)

text: soil organic matter

characteristic: environment (material)

text: monosodium phosphate (10 kg P ha-1 y-1) for 7 years

characteristic: fertilizer regimen

text: Ecuador

text: Zamora-Chinchipe

text: plant

text: eukaryote

text: mutualism

text: Spermatophyta environmental sample

characteristic: organism

text: fine root

text: plant-associated

text: Soil core

text: Spermatophyta environmental sample

text: Illumuna MiSeq 2 x 250 bp

text: mixed root sample

characteristic: title

text: phototroph


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FREE UNIVERSITY OF BERLIN

text: public

text: Tropical montane woodland

text: Slope

text: soil organic matter

text: urea (50 kg of N ha-1 y-1) for 7 years

characteristic: geographic location (altitude)

text: Ecuador

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Zamora-Chinchipe

characteristic: geographic location (region and locality)

text: plant

characteristic: host common name

text: eukaryote

characteristic: investigation type

text: mutualism

characteristic: observed biotic relationship

text: Spermatophyta environmental sample

characteristic: organism count

text: fine root

characteristic: plant body site

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: Soil core

characteristic: sample collection device or method

characteristic: sample storage temperature

text: Spermatophyta environmental sample

text: Illumuna MiSeq 2 x 250 bp

characteristic: sequencing method

text: mixed root sample

text: phototroph

characteristic: trophic level


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FREE UNIVERSITY OF BERLIN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: Tropical montane woodland

characteristic: environment (biome)

text: Slope

characteristic: environment (feature)

text: soil organic matter

characteristic: environment (material)

text: Control

characteristic: fertilizer regimen

text: Ecuador

text: Zamora-Chinchipe

text: plant

text: eukaryote

text: mutualism

text: Spermatophyta environmental sample

characteristic: organism

text: fine root

text: plant-associated

text: Soil core

text: Spermatophyta environmental sample

text: Illumuna MiSeq 2 x 250 bp

text: mixed root sample

characteristic: title

text: phototroph


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FREE UNIVERSITY OF BERLIN

text: public

text: Tropical montane woodland

text: Slope

text: soil organic matter

text: Control

characteristic: geographic location (altitude)

text: Ecuador

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Loja

characteristic: geographic location (region and locality)

text: plant

characteristic: host common name

text: eukaryote

characteristic: investigation type

text: mutualism

characteristic: observed biotic relationship

text: Spermatophyta environmental sample

characteristic: organism count

text: fine root

characteristic: plant body site

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: Soil core

characteristic: sample collection device or method

characteristic: sample storage temperature

text: Spermatophyta environmental sample

text: Illumuna MiSeq 2 x 250 bp

characteristic: sequencing method

text: mixed root sample

text: phototroph

characteristic: trophic level


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FREE UNIVERSITY OF BERLIN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: Tropical montane woodland

characteristic: environment (biome)

text: Slope

characteristic: environment (feature)

text: soil organic matter

characteristic: environment (material)

text: urea (50 kg of N ha-1 y-1) for 7 years

characteristic: fertilizer regimen

text: Ecuador

text: Loja

text: plant

text: eukaryote

text: mutualism

text: Spermatophyta environmental sample

characteristic: organism

text: fine root

text: plant-associated

text: Soil core

text: Spermatophyta environmental sample

text: Illumuna MiSeq 2 x 250 bp

text: mixed root sample

characteristic: title

text: phototroph


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FREE UNIVERSITY OF BERLIN

text: public

text: Tropical montane woodland

text: Slope

text: soil organic matter

characteristic: geographic location (altitude)

text: Ecuador

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Loja

characteristic: geographic location (region and locality)

text: plant

characteristic: host common name

text: eukaryote

characteristic: investigation type

text: mutualism

characteristic: observed biotic relationship

text: Spermatophyta environmental sample

characteristic: organism count

text: fine root

characteristic: plant body site

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: Soil core

characteristic: sample collection device or method

characteristic: sample storage temperature

text: Spermatophyta environmental sample

text: Illumuna MiSeq 2 x 250 bp

characteristic: sequencing method

text: mixed root sample

text: phototroph

characteristic: trophic level


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FREE UNIVERSITY OF BERLIN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: Tropical montane woodland

characteristic: environment (biome)

text: Slope

characteristic: environment (feature)

text: soil organic matter

characteristic: environment (material)

characteristic: fertilizer regimen

text: Ecuador

text: Loja

text: plant

text: eukaryote

text: mutualism

text: Spermatophyta environmental sample

characteristic: organism

text: fine root

text: plant-associated

text: Soil core

text: Spermatophyta environmental sample

text: Illumuna MiSeq 2 x 250 bp

text: mixed root sample

characteristic: title

text: phototroph


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FREE UNIVERSITY OF BERLIN

text: public

text: Tropical montane woodland

text: Slope

text: soil organic matter

text: Control

characteristic: geographic location (altitude)

text: Ecuador

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Zamora-Chinchipe

characteristic: geographic location (region and locality)

text: plant

characteristic: host common name

text: eukaryote

characteristic: investigation type

text: mutualism

characteristic: observed biotic relationship

text: Spermatophyta environmental sample

characteristic: organism count

text: fine root

characteristic: plant body site

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: Soil core

characteristic: sample collection device or method

characteristic: sample storage temperature

text: Spermatophyta environmental sample

text: Illumuna MiSeq 2 x 250 bp

characteristic: sequencing method

text: mixed root sample

text: phototroph

characteristic: trophic level


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FREE UNIVERSITY OF BERLIN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: Tropical montane woodland

characteristic: environment (biome)

text: Slope

characteristic: environment (feature)

text: soil organic matter

characteristic: environment (material)

characteristic: fertilizer regimen

text: Ecuador

text: Zamora-Chinchipe

text: plant

text: eukaryote

text: mutualism

text: Spermatophyta environmental sample

characteristic: organism

text: fine root

text: plant-associated

text: Soil core

text: Spermatophyta environmental sample

text: Illumuna MiSeq 2 x 250 bp

text: mixed root sample

characteristic: title

text: phototroph


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FREE UNIVERSITY OF BERLIN

text: public

text: Tropical montane woodland

text: Slope

text: soil organic matter

text: urea (50 kg of N ha-1 y-1) for 7 years

characteristic: geographic location (altitude)

text: Ecuador

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Zamora-Chinchipe

characteristic: geographic location (region and locality)

text: plant

characteristic: host common name

text: eukaryote

characteristic: investigation type

text: mutualism

characteristic: observed biotic relationship

text: Spermatophyta environmental sample

characteristic: organism count

text: fine root

characteristic: plant body site

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: Soil core

characteristic: sample collection device or method

characteristic: sample storage temperature

text: Spermatophyta environmental sample

text: Illumuna MiSeq 2 x 250 bp

characteristic: sequencing method

text: mixed root sample

text: phototroph

characteristic: trophic level


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FREE UNIVERSITY OF BERLIN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: Tropical montane woodland

characteristic: environment (biome)

text: Slope

characteristic: environment (feature)

text: soil organic matter

characteristic: environment (material)

characteristic: fertilizer regimen

text: Ecuador

text: Zamora-Chinchipe

text: plant

text: eukaryote

text: mutualism

text: Spermatophyta environmental sample

characteristic: organism

text: fine root

text: plant-associated

text: Soil core

text: Spermatophyta environmental sample

text: Illumuna MiSeq 2 x 250 bp

text: mixed root sample

characteristic: title

text: phototroph


E-MTAB-10473:Sample 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-10473:Sample 1

tag: Namespace:Institute of Medical Microbiology, Virology and Hygiene, University Medical Center Hamburg-Eppendorf (UKE)

text: ArrayExpress

characteristic: broker name

text: macrophage

characteristic: cell type

text: human

characteristic: common name

text: Protocols: Human peripheral blood monocytes were isolated by centrifugation of heparinized blood in Ficoll. Monocytic cells were isolated with magnetic anti-CD14 antibody beads and an MS+ Separation Column (Miltenyi Biotec) according to the manufacturer’s instructions and seeded into 6-well plates at a density of 2 × 106 cells. Cells were cultured in RPMI containing 20% autologous serum at 37°C, 5% CO2, and 90% humidity. Medium was changed every 3-4 days. Cells were cultured in RPMI1640 containing 20 % autologous serum at 37 °C and 5 % CO2 atmosphere. The medium was changed every three days until cells were differentiated into macrophages after 7 days. Macrophages were used for infection 1-2 weeks after the isolation On the day before the infection of primary human macrophages the cell medium was changed to RPMI1640 without antibiotics and serum and Yersinia precultures were grown overnight in LB medium with appropriate antibiotics at 27 °C and 200 x rpm. On the day of infection precultures were diluted 1:20 in fresh LB medium without antibiotics and incubated for 90 min at 37 °C and 200 x rpm to induce activation of the Yersinia T3SS machinery and Yop expression. Afterwards bacteria were pelleted by centrifugation for 10 min at 6000 x g and 4 °C and resuspended in 1 ml ice-cold PBS containing 1 mM MgCl2 and CaCl2. The optical density OD600 was adjusted to 3.6 and afterwards macrophages were infected at multiplicity-of-infection (MOI) of 100. Cell culture dishes were centrifuged for 2 min at RT and 200 x g to sediment bacteria on the cells and synchronize infection. Cells were incubated at 37 °C for an infection time depending on the experiment. Total RNA of ~1-2 x 106 human macrophages was isolated using RNeasy extraction kit (Qiagen, Germany) including DNAse treatment according to manufacturer’s instructions. RNA integrity of the isolated RNA was analysed with the RNA 6000 Nano Chip (Agilent Technologies, USA) on an Agilent 2100 Bioanalyzer (Agilent Technologies, USA). mRNA was extracted using the NEBNext Poly(A) mRNA Magnetic Isolation module (New England Biolabs, USA). RNA-seq libraries were generated using the NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs, USA) as per the manufacturer’s recommendations.

text: Yersinia enterocolitica WA314deltaYersiniapP

characteristic: infect

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: monocyte

characteristic: progenitor cell type

text: Homo sapiens

text: Sample 1


E-MTAB-10473:Sample 10

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute of Medical Microbiology, Virology and Hygiene, University Medical Center Hamburg-Eppendorf (UKE)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10473:Sample 10

characteristic: Submitter Id

text: ArrayExpress

text: macrophage

text: human

text: Yersinia enterocolitica WA314

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 10


E-MTAB-10473:Sample 11

text: public

text: E-MTAB-10473:Sample 11

text: ArrayExpress

text: macrophage

text: human

characteristic: description

text: Yersinia enterocolitica WA314

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 11

characteristic: title


E-MTAB-10473:Sample 12

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-10473:Sample 12

text: ArrayExpress

characteristic: broker name

text: macrophage

text: human

text: Yersinia enterocolitica WA314

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 12


E-MTAB-10473:Sample 2

text: public

text: E-MTAB-10473:Sample 2

text: ArrayExpress

text: macrophage

characteristic: cell type

text: human

characteristic: common name

characteristic: infect

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 2


E-MTAB-10473:Sample 3

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-10473:Sample 3

text: ArrayExpress

text: macrophage

text: human

text: mock

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: monocyte

characteristic: progenitor cell type

text: Homo sapiens

text: Sample 3


E-MTAB-10473:Sample 4

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-10473:Sample 4

text: ArrayExpress

text: macrophage

text: human

text: mock

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 4


E-MTAB-10473:Sample 5

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10473:Sample 5

text: ArrayExpress

text: macrophage

text: human

text: Yersinia enterocolitica WAC

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 5


E-MTAB-10473:Sample 6

text: public

text: E-MTAB-10473:Sample 6

characteristic: Submitter Id

text: ArrayExpress

text: macrophage

text: human

characteristic: description

text: Yersinia enterocolitica WAC

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 6


E-MTAB-10473:Sample 7

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-10473:Sample 7

text: ArrayExpress

text: macrophage

text: human

text: Yersinia enterocolitica WAC

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 7

characteristic: title


E-MTAB-10473:Sample 8

text: public

text: E-MTAB-10473:Sample 8

text: ArrayExpress

characteristic: broker name

text: macrophage

characteristic: cell type

text: human

characteristic: common name

text: Yersinia enterocolitica WAC

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 8


E-MTAB-10473:Sample 9

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-10473:Sample 9

text: ArrayExpress

text: macrophage

text: human

text: Yersinia enterocolitica WA314

characteristic: infect

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: monocyte

text: Homo sapiens

text: Sample 9


E-MTAB-10475:Sample 1

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-10475:Sample 1

text: ArrayExpress

text: macrophage

text: human

text: Protocols: Human peripheral blood monocytes were isolated by centrifugation of heparinized blood in Ficoll. Monocytic cells were isolated with magnetic anti-CD14 antibody beads and an MS+ Separation Column (Miltenyi Biotec) according to the manufacturer’s instructions and seeded into 6-well plates at a density of 2 × 106 cells. Cells were cultured in RPMI containing 20% autologous serum at 37°C, 5% CO2, and 90% humidity. The medium was changed every three days until cells were differentiated into macrophages after 7 days. Macrophages were used for infection 1-2 weeks after the isolation For the ChIP with formaldehyde crosslinking, macrophages (~3-10 x 106 cells per condition) were washed once with warm PBS and incubated for 30 min at 37 °C with accutase (eBioscience, USA) to detach the cells. ChIP protocol steps were performed as described in (Günther et al., 2016, PMID: 26855283), except that BSA-blocked ChIP grade protein A/G magnetic beads (Thermo Fisher Scientific, USA) were added to the chromatin and antibody mixture and incubated for 2 h at 4 °C rotating to bind chromatin-antibody complexes. Samples were incubated for ~3 min with a magnetic stand to ensure attachment of beads to the magnet and mixed by pipetting during the wash steps. ChIP-seq libraries were constructed with 1-10 ng of ChIP DNA or input control as a starting material. Libraries were generated using the NEXTflex™ ChIP-Seq Kit (Bioo Scientific, USA) as per manufacturer’s recommendations. Concentrations of all samples were measured with a Qubit Fluorometer (Thermo Fisher Scientific, USA) and fragment length distribution of the final libraries was analysed with the DNA High Sensitivity Chip on an Agilent 2100 Bioanalyzer (Agilent Technologies, USA).

text: Yersinia enterocolitica WA314deltaYersiniapM

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

characteristic: progenitor cell type

text: Homo sapiens

text: Sample 1


E-MTAB-10475:Sample 10

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-10475:Sample 10

text: ArrayExpress

text: macrophage

text: human

text: Yersinia enterocolitica WA314

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 10


E-MTAB-10475:Sample 11

text: public

characteristic: SRA accession

text: E-MTAB-10475:Sample 11

characteristic: Submitter Id

text: ArrayExpress

text: macrophage

text: human

characteristic: description

text: mock

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 11


E-MTAB-10475:Sample 12

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-10475:Sample 12

text: ArrayExpress

text: macrophage

text: human

text: mock

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 12


E-MTAB-10475:Sample 13

text: public

text: E-MTAB-10475:Sample 13

text: ArrayExpress

characteristic: broker name

text: macrophage

characteristic: cell type

text: human

text: Yersinia enterocolitica WAC

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 13

characteristic: title


E-MTAB-10475:Sample 14

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-10475:Sample 14

text: ArrayExpress

text: macrophage

text: human

characteristic: common name

text: Yersinia enterocolitica WAC

characteristic: infect

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 14


E-MTAB-10475:Sample 15

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-10475:Sample 15

text: ArrayExpress

text: macrophage

text: human

text: Yersinia enterocolitica WAC

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: monocyte

text: Homo sapiens

text: Sample 15


E-MTAB-10475:Sample 16

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10475:Sample 16

text: ArrayExpress

text: macrophage

text: human

text: Yersinia enterocolitica WAC

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

characteristic: progenitor cell type

text: Homo sapiens

text: Sample 16


E-MTAB-10475:Sample 17

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10475:Sample 17

characteristic: Submitter Id

text: ArrayExpress

text: macrophage

text: human

text: Yersinia enterocolitica WA314

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 17


E-MTAB-10475:Sample 18

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-10475:Sample 18

text: ArrayExpress

text: macrophage

text: human

characteristic: description

text: Yersinia enterocolitica WA314

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 18


E-MTAB-10475:Sample 19

text: public

text: E-MTAB-10475:Sample 19

text: ArrayExpress

characteristic: broker name

text: macrophage

characteristic: cell type

text: human

text: Yersinia enterocolitica WA314

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 19


E-MTAB-10475:Sample 2

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-10475:Sample 2

text: ArrayExpress

text: macrophage

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 2

characteristic: title


E-MTAB-10475:Sample 20

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-10475:Sample 20

text: ArrayExpress

text: macrophage

text: human

text: Yersinia enterocolitica WA314

characteristic: infect

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 20


E-MTAB-10475:Sample 21

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10475:Sample 21

text: ArrayExpress

text: macrophage

text: human

text: mock

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: monocyte

text: Homo sapiens

text: Sample 21


E-MTAB-10475:Sample 22

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10475:Sample 22

text: ArrayExpress

text: macrophage

text: human

text: mock

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

characteristic: progenitor cell type

text: Homo sapiens

text: Sample 22


E-MTAB-10475:Sample 23

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-10475:Sample 23

characteristic: Submitter Id

text: ArrayExpress

text: macrophage

text: human

text: Yersinia enterocolitica WAC

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 23


E-MTAB-10475:Sample 24

text: public

text: E-MTAB-10475:Sample 24

text: ArrayExpress

characteristic: broker name

text: macrophage

characteristic: cell type

text: human

characteristic: description

text: Yersinia enterocolitica WAC

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 24


E-MTAB-10475:Sample 25

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-10475:Sample 25

text: ArrayExpress

text: macrophage

text: human

characteristic: common name

text: Yersinia enterocolitica WA314

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 25


E-MTAB-10475:Sample 26

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-10475:Sample 26

text: ArrayExpress

text: macrophage

text: human

text: Yersinia enterocolitica WA314

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 26

characteristic: title


E-MTAB-10475:Sample 27

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10475:Sample 27

text: ArrayExpress

text: macrophage

text: human

text: mock

characteristic: infect

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 27


E-MTAB-10475:Sample 28

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10475:Sample 28

text: ArrayExpress

text: macrophage

text: human

text: mock

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: monocyte

text: Homo sapiens

text: Sample 28


E-MTAB-10475:Sample 29

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-10475:Sample 29

text: ArrayExpress

text: macrophage

text: human

text: Yersinia enterocolitica WAC

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

characteristic: progenitor cell type

text: Homo sapiens

text: Sample 29


E-MTAB-10475:Sample 3

text: public

text: E-MTAB-10475:Sample 3

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: macrophage

characteristic: cell type

text: human

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 3


E-MTAB-10475:Sample 30

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-10475:Sample 30

text: ArrayExpress

text: macrophage

text: human

characteristic: common name

characteristic: description

text: Yersinia enterocolitica WAC

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 30


E-MTAB-10475:Sample 31

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-10475:Sample 31

text: ArrayExpress

text: macrophage

text: human

text: Yersinia enterocolitica WAC

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 31