text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0535, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Clinical Bioinformatics Area

characteristic: Submitter Id

text: Servicio de Microbiologia, Hospital Reina Sofia, Cordoba, Spain

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status

text: covseq0536, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0537, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Servicio de Microbiologia, Complejo Hospitalario Torrecardenas, Almeria, Spain

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0538, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: Servicio de Microbiologia, Hospital Carlos Haya, Malaga, Spain

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0539, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0540, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0541, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0542, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

text: Servicio de Microbiologia, Hospital de Poniente, Almeria, Spain

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0543, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0544, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0545, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0546, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0547, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: Servicio de Microbiologia, Hospital Reina Sofia, Cordoba, Spain

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0548, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: active surveillance in response to outbreak

text: covseq0549, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0550, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0551, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0552, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0553, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0554, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0555, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0556, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: Servicio de Microbiologia, Complejo Hospitalario Torrecardenas, Almeria, Spain

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0557, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0558, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0559, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: Servicio de Microbiologia, Hospital Carlos Haya, Malaga, Spain

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0560, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0561, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0562, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status

text: covseq0563, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

text: Servicio de Microbiologia, Complejo Hospitalario de Jaen, Jaen, Spain

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0564, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0565, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: Servicio de Microbiologia, Hospital Reina Sofia, Cordoba, Spain

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0566, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0567, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0568, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0569, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

text: Servicio de Microbiologia, Hospital Universitario San Cecilio, Granada, Spain

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0570, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Servicio de Microbiologia, Hospital Costa del Sol, Marbella, Spain

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0571, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: Servicio de Microbiologia, Hospital Universitario Virgen del Rocio, Sevilla, Spain

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0572, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0573, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: active surveillance in response to outbreak

text: covseq0574, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0575, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0576, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0577, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0578, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0579, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0580, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0581, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0582, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0583, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0584, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0585, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0586, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: Servicio de Microbiologia, Hospital Universitario Virgen del Rocio, Sevilla, Spain

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0587, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0588, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: active surveillance in response to outbreak

text: covseq0589, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0590, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0591, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0592, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0593, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0594, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0595, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0596, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0597, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0598, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0599, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0600, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0601, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: Servicio de Microbiologia, Hospital Universitario Virgen del Rocio, Sevilla, Spain

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0602, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0603, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: active surveillance in response to outbreak

text: covseq0604, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0605, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0606, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Servicio de Microbiologia, Hospital Juan Ramon Jimenez, Huelva, Spain

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0607, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0608, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0609, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0610, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0611, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0612, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0613, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: Servicio de Microbiologia, Hospital Virgen Macarena, Sevilla, Spain

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0614, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0615, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0616, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0617, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: active surveillance in response to outbreak

text: covseq0618, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0619, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0620, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0621, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Servicio de Microbiologia, Hospital Universitario Virgen del Rocio, Sevilla, Spain

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: covseq0622, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

characteristic: Submitter Id

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: covseq0623, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Instituto Nacional de Saude Doutor Ricardo Jorge I.P. (INSA) - Portugal

characteristic: CENTER NAME

characteristic: GISAID Accession ID

characteristic: INSDC first public

text: public

tag: Namespace:NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE

characteristic: TITLE

text: not provided

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Portugal

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: Severe acute respiratory syndrome coronavirus 2


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

text: not provided

text: Portugal

text: Human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided


text: University of Tartu, Estonia

characteristic: INSDC first public

text: public

text: ena-upload-cli v0.3.1 @ Galaxy

tag: Namespace:University of Tartu, Estonia

text: University of Tartu KoroGenoEST3 consortium, Estonia

characteristic: collecting institution

characteristic: collection date

text: Aare Abroi, Radko Avi, Taavi Päll, Heiki Niglas , Merit Pauskar, Arina Shablinskaja, Eveli Kallas, Andrio Lahesaare, Kai Truusalu, Dagmar Hoidmets, Olga Sadikova, Kaspar Ratnik, Hanna Sepp, Liidia Dotsenko, Jevgenia Epštein, Heleene Suija, Katrin Kaarna, Lili Milani, Mait Metspalu, Ott Eric Oopkaup, Ivar Koppel, Erik Jaaniso, Ivan Kuzmin, Uku Raudvere, Tuuli Reisberg, Hedi Peterson, Ulvi Gerst Talas, Paul Naaber, Mari-Anne Härma, Irja Lutsar, Kristi Huik

text: Nasopharyngeal/oropharyngeal swab from Estonian Covid-19 patient

characteristic: description

text: Estonia

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

unit: year

characteristic: host age

text: human

text: diseased

text: Homo sapiens

text: female

text: host subject id

characteristic: host subject id

characteristic: isolate

characteristic: isolation source non-host-associated

characteristic: organism

characteristic: sample capture status

text: PCR tiled amplicon WGS of SARS-Cov-2, pre-selected subset from active surveillance

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Tartu, Estonia

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.3.1 @ Galaxy

characteristic: collector name

text: Estonia

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: Homo sapiens

text: male

text: host subject id


text: University of Tartu, Estonia

characteristic: INSDC first public

text: public

text: ena-upload-cli v0.3.1 @ Galaxy

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

characteristic: description

text: Estonia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: human

text: healthy

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: host subject id

characteristic: host subject id

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Tartu, Estonia

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.3.1 @ Galaxy

text: Estonia

text: human

text: not provided

text: Homo sapiens

text: male

text: host subject id

characteristic: isolation source non-host-associated

characteristic: organism

characteristic: sample capture status

characteristic: title


text: University of Tartu, Estonia

characteristic: INSDC first public

text: public

text: ena-upload-cli v0.3.1 @ Galaxy

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

characteristic: description

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: host subject id


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Tartu, Estonia

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.3.1 @ Galaxy

text: Estonia

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text: Homo sapiens

characteristic: host scientific name

text: female

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text: host subject id

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text: active surveillance not initiated by an outbreak


text: University of Tartu, Estonia

characteristic: INSDC first public

text: public

text: ena-upload-cli v0.3.1 @ Galaxy

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

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text: Estonia

characteristic: geographic location (country and/or sea)

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text: human

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text: Homo sapiens

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text: host subject id

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characteristic: organism

characteristic: sample capture status

characteristic: title


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characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

text: University of Tartu, Estonia

characteristic: INSDC center name

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characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.3.1 @ Galaxy

text: Estonia

characteristic: geographic location (longitude)

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text: Homo sapiens

text: male

text: host subject id


text: University of Tartu, Estonia

characteristic: INSDC first public

text: public

text: ena-upload-cli v0.3.1 @ Galaxy

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

characteristic: description

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: host subject id

characteristic: host subject id

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanquin Research

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Sanquin Research

unit: week

characteristic: age

text: ArrayExpress

characteristic: broker name

text: regulatory T cell

characteristic: cell type

text: human

characteristic: common name

text: Protocols: Thymic tissue was finely dissociated with scissors at room temperature, placed in gentleMACS C tubes (Miltenyi Biotech), filled up to 10 mL with MACS buffer (PBS containing 0.5% FCS) and mechanically disrupted with the gentleMACS Dissociator (Miltenyi Biotech). A single-cell suspension was generated by pressing the tissue through a 100 μm cell strainer. Cells were collected in 50 mL Falcon tubes, pelleted through centrifugation (350g for 10 minutes at RT) using MACS buffer and counted. Single cells were FACS-sorted into 384-well plates containing 384 primers and Mineral oil (Sigma). After sorting, plates were snap-frozen on dry ice and stored at -80° C. For amplification, cells were heat-lysed at 65° C followed by cDNA synthesis using the CEL-Seq2 protocol (Hashimshony et al. 2016) and robotic liquid handling platforms. After second strand cDNA synthesis, the barcoded material was pooled into libraries of 384 cells and amplified using IVT. Following amplification, the rest of the CEL-seq2 protocol was followed for preparation of the amplified cDNA library, using TruSeq small RNA primers (Illumina).

text: postnatal

characteristic: developmental stage

text: normal

characteristic: disease

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: thymus

characteristic: organism part

text: Homo sapiens

text: OK

characteristic: single cell well quality

characteristic: title


E-MTAB-10990:Sample 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC first public

text: public

text: E-MTAB-10990:Sample 1

tag: Namespace:National Institute of Agricultural Botany

characteristic: Submitter Id

unit: month

text: ArrayExpress

text: Abuab

characteristic: cultivar

text: Protocols: Pseudostem of the plant materials were collected native state CTAB with LiCl precipitation Random fragmentation of the cDNA sample was done, followed by 5' and 3' adapter ligation

characteristic: description

text: vegetative

text: wild type genotype

characteristic: genotype

text: Musa textilis

text: Musa textilis

text: pseudostem

text: Musa textilis

text: Sample 1

text: abaca

characteristic: type


E-MTAB-10990:Sample 2

characteristic: External Id

text: National Institute of Agricultural Botany

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10990:Sample 2

characteristic: age

text: (Musa textilis) Abuab x (M. balbisiana) Pacol

characteristic: backcross

text: ArrayExpress

characteristic: broker name

text: Bandala (BC2)

text: vegetative

text: wild type genotype

text: mixed sample

text: mixed sample

text: pseudostem

text: mixed sample

text: Sample 2

text: abaca


E-MTAB-10990:Sample 3

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-10990:Sample 3

text: ArrayExpress

text: vegetative

characteristic: developmental stage

text: wild type genotype

text: mixed sample

characteristic: organism

text: mixed sample

text: pseudostem

characteristic: organism part

text: mixed sample

text: Sample 3

characteristic: title

text: abaca


E-MTAB-10990:Sample 4

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC first public

text: public

text: E-MTAB-10990:Sample 4

characteristic: Submitter Id

text: ArrayExpress

text: Inosa

characteristic: cultivar

text: vegetative

text: wild type genotype

text: Musa textilis

text: Musa textilis

text: pseudostem

text: Musa textilis

text: Sample 4

text: abaca


E-MTAB-10990:Sample 5

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-10990:Sample 5

text: ArrayExpress

text: Balbis banana

characteristic: common name

text: Pacol

characteristic: description

text: vegetative

text: wild type genotype

characteristic: genotype

text: Musa balbisiana

text: Musa balbisiana

text: pseudostem

text: Musa balbisiana

text: Sample 5

text: banana

characteristic: type


E-MTAB-10990:Sample 6

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10990:Sample 6

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Tangongon

text: vegetative

text: wild type genotype

text: Musa textilis

text: Musa textilis

text: pseudostem

text: Musa textilis

text: Sample 6

text: abaca


characteristic: ENA-CHECKLIST

text: SC

text: public

text: SC

text: Integrated Covid Hub North East

characteristic: collecting institution

characteristic: collection date

text: Samples prepared at Integrated Covid Hub North East by Integrated Covid Hub North East and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

characteristic: geographic location (region and locality)

text: Human

characteristic: host scientific name

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: SC

text: Lighthouse Lab in Alderley Park

text: Samples prepared at Lighthouse Lab in Alderley Park by Jacquelyn Wynn, Mairead Hyland, The Lighthouse Lab in Alderley Park and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

characteristic: description

text: United Kingdom

text: Wales

text: Human


text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SC

characteristic: broker name

text: Rosalind Franklin Laboratory

text: Samples prepared at Rosalind Franklin Laboratory by Donald Fraser, Suki Lee, Rob Howes, The Rosalind Franklin Laboratory and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

text: United Kingdom

text: Wales

text: Human


characteristic: ENA-CHECKLIST

text: SC

text: public

text: SC

text: Lighthouse Lab in Milton Keynes

characteristic: collecting institution

characteristic: collection date

text: Samples prepared at Lighthouse Lab in Milton Keynes by The Lighthouse Lab in Milton Keynes and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

text: Human


text: SC

text: public

text: SC

text: Lighthouse Lab in Glasgow

text: Samples prepared at Lighthouse Lab in Glasgow by Harper VanSteenhouse, Yumi Kasai, David Gray, Carol Clugston, Anna Dominiczak and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: Scotland

characteristic: geographic location (region and locality)

text: Human

characteristic: host scientific name

characteristic: organism

characteristic: sample capture status


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: SC

text: Lighthouse Lab in Milton Keynes

text: United Kingdom

text: Wales

text: Human

text: Severe acute respiratory syndrome coronavirus 2

characteristic: title


text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: SC

text: Lighthouse Lab in Glasgow

characteristic: description

text: United Kingdom

text: England

text: Human


text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SC

characteristic: broker name

text: Lighthouse Lab in Alderley Park

text: United Kingdom

text: England

text: Human


characteristic: ENA-CHECKLIST

text: SC

text: public

text: SC

text: Integrated Covid Hub North East

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

text: Human


text: SC

text: public

text: SC

text: Lighthouse Laboratory Plymouth

text: Samples prepared at Lighthouse Laboratory Plymouth by Lighthouse Laboratory Plymouth and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: Human

characteristic: host scientific name

characteristic: organism

characteristic: sample capture status


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: SC

text: Lighthouse Laboratory Plymouth

text: United Kingdom

text: Wales

text: Human

characteristic: title


text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: SC

text: Health Services Laboratories

text: Samples prepared at Health Services Laboratories by Health Services Laboratories and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

characteristic: description

text: United Kingdom

text: England

text: Human


text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SC

characteristic: broker name

text: Integrated Covid Hub North East

text: United Kingdom

text: Scotland

text: Human


characteristic: ENA-CHECKLIST

text: SC

text: public

text: SC

text: Rosalind Franklin Laboratory

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

text: Human


text: SC

text: public

text: SC

text: Lighthouse Lab in Alderley Park

text: United Kingdom

text: Scotland

characteristic: geographic location (region and locality)

text: Human

characteristic: host scientific name

characteristic: organism

characteristic: sample capture status


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: SC

text: Lighthouse Lab in Milton Keynes

text: United Kingdom

text: Scotland

text: Human

characteristic: title


text: IOR - Institute of Oncology Research

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:IOR - Institute of Oncology Research

characteristic: Submitter Id

text: ArrayExpress

text: LNCAP

characteristic: cell line

text: human

characteristic: common name

text: Protocols: PDX tumors were maintained by subcutaneous implantation of matrigel-embedded tumor fragment (1-2-mmm average diameter tumor) or take rate varied from 1 to 6 months. Cells were suspended in PBS and 50% Matrigel and subcutaneously injected into the dorsal flanks of the mice (2 10^6 cells/mouse). Tumor growth was recorded using a digital caliper, and tumor volumes were calculated using the formula (L x W 2) /2, where L=length and W=width of the tumor. Tumor volume was measured 2 times per week. When the tumor reached the dimension of 50-100 mm2, mice were surgically castrated. PDX tumor tissue was cut into small pieces (1-0.5 mm) with a scalpel blade and then digested in Collagenase Type I media solution at 37 °C for 45-60 min. After enzymatic dissociation, the cell suspension was passed through a 100 µM cell strainer to eliminate macroscopic tissue pieces and centrifuged. The cell pellet was then resuspended in 2-volume pf RBC lysis buffer, incubated for 3 min at RT, and, after centrifugation, resuspended in media. Cell suspension of PDX cells was then propagated in 3D vitro culture. The cells were embedded in 50% phenol red-free Matrigel and plated as a drop in a 96-well-plate (10000 cells/ well) and maintained in the medium 7-10 days. After resuspension in PBS, single-cell suspensions were loaded into a 10x Chromium Controller (10x Genomics, Pleasanton, CA, USA), aiming for 10000-5000 cells, with the Chromiun Next GEM Single Cell 3' v3.1 reagent kit (PN-1000121 10x Genomics), according to the manufacturer’s instructions. Libraries construction was performed following the Chromiun Next GEM Single Cell 3' (v3.1) reagent kit (PN-1000121 10x Genomics), according to the manufacturer’s instructions.

characteristic: description

text: prostate cancer

characteristic: disease

text: wild type genotype

characteristic: genotype

text: transplanted into mice until tumour growth

characteristic: growth condition

text: Homo sapiens

text: Homo sapiens

text: prostate gland

characteristic: organism part

text: Homo sapiens

text: LNCaP


characteristic: ENA-CHECKLIST

text: IOR - Institute of Oncology Research

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

characteristic: broker name

text: LNCAP

text: human

text: Protocols: PDX tumors were maintained by subcutaneous implantation of matrigel-embedded tumor fragment (1-2-mmm average diameter tumor) or take rate varied from 1 to 6 months. Cells were suspended in PBS and 50% Matrigel and subcutaneously injected into the dorsal flanks of the mice (2 10^6 cells/mouse). Tumor growth was recorded using a digital caliper, and tumor volumes were calculated using the formula (L x W 2) /2, where L=length and W=width of the tumor. Tumor volume was measured 2 times per week. When the tumor reached the dimension of 50-100 mm2, mice were surgically castrated. PDX tumor tissue was cut into small pieces (1-0.5 mm) with a scalpel blade and then digested in Collagenase Type I media solution at 37 °C for 45-60 min. After enzymatic dissociation, the cell suspension was passed through a 100 µM cell strainer to eliminate macroscopic tissue pieces and centrifuged. The cell pellet was then resuspended in 2-volume pf RBC lysis buffer, incubated for 3 min at RT, and, after centrifugation, resuspended in media. Cell suspension of PDX cells was then propagated in 3D vitro culture. The cells were embedded in 50% phenol red-free Matrigel and plated as a drop in a 96-well-plate (10000 cells/ well) and maintained in the medium 7-10 days. Samples were collected either 80 days after castration (residual) or 120 days after castration (regrowth), and subjected to the molecular assessment. After resuspension in PBS, single-cell suspensions were loaded into a 10x Chromium Controller (10x Genomics, Pleasanton, CA, USA), aiming for 10000-5000 cells, with the Chromiun Next GEM Single Cell 3' v3.1 reagent kit (PN-1000121 10x Genomics), according to the manufacturer’s instructions. Libraries construction was performed following the Chromiun Next GEM Single Cell 3' (v3.1) reagent kit (PN-1000121 10x Genomics), according to the manufacturer’s instructions.

text: prostate cancer

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: prostate gland

text: Homo sapiens


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IOR - Institute of Oncology Research

text: public

text: ArrayExpress

text: LNCAP

text: human

text: Protocols: PDX tumors were maintained by subcutaneous implantation of matrigel-embedded tumor fragment (1-2-mmm average diameter tumor) or take rate varied from 1 to 6 months. Cells were suspended in PBS and 50% Matrigel and subcutaneously injected into the dorsal flanks of the mice (2 10^6 cells/mouse). Tumor growth was recorded using a digital caliper, and tumor volumes were calculated using the formula (L x W 2) /2, where L=length and W=width of the tumor. Tumor volume was measured 2 times per week. When the tumor reached the dimension of 50-100 mm2, mice were surgically castrated. PDX tumor tissue was cut into small pieces (1-0.5 mm) with a scalpel blade and then digested in Collagenase Type I media solution at 37 °C for 45-60 min. After enzymatic dissociation, the cell suspension was passed through a 100 µM cell strainer to eliminate macroscopic tissue pieces and centrifuged. The cell pellet was then resuspended in 2-volume pf RBC lysis buffer, incubated for 3 min at RT, and, after centrifugation, resuspended in media. Cell suspension of PDX cells was then propagated in 3D vitro culture. The cells were embedded in 50% phenol red-free Matrigel and plated as a drop in a 96-well-plate (10000 cells/ well) and maintained in the medium 7-10 days. Samples were collected either 80 days after castration (residual) or 120 days after castration (regrowth), and subjected to the molecular assessment. The mice were treated one week after castration by daily i.p. with GSK126 at the dose of 100mg/Kg for 3 weeks. After resuspension in PBS, single-cell suspensions were loaded into a 10x Chromium Controller (10x Genomics, Pleasanton, CA, USA), aiming for 10000-5000 cells, with the Chromiun Next GEM Single Cell 3' v3.1 reagent kit (PN-1000121 10x Genomics), according to the manufacturer’s instructions. Libraries construction was performed following the Chromiun Next GEM Single Cell 3' (v3.1) reagent kit (PN-1000121 10x Genomics), according to the manufacturer’s instructions.

text: prostate cancer

text: wild type genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: prostate gland

text: Homo sapiens


text: IOR - Institute of Oncology Research

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: ArrayExpress

text: human

text: prostate cancer

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: prostate gland

text: Homo sapiens

characteristic: title


text: IOR - Institute of Oncology Research

text: public

text: ArrayExpress

text: PNPCa

characteristic: cell line

text: human

characteristic: common name

characteristic: description

text: prostate cancer

characteristic: disease

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: prostate gland

text: Homo sapiens

text: PNPCa


characteristic: ENA-CHECKLIST

text: public

tag: Namespace:1. Plate-forme Technologique Biomics – Centre de Ressources et Recherches Technologiques (C2RT), Institut Pasteur, Paris, France. 2. Hub de Bioinformatique et Biostatistique - Departement Biologie Computationnelle, Institut Pasteur, 75015 Paris, France

characteristic: age

text: ArrayExpress

text: house mouse

text: Protocols: WT and cMKO mice aged 8 and 18 weeks were sacrificed by cervical dislocation and hearts were quickly excised and rinsed with cold sterile PBS. Left ventricle posterior walls were collected and snap frozen in liquid nitrogen and stored at -80°C until use Animals were handled according to the European legislation for animal welfare (Directive 2010/63/EU). All animal protocols were reviewed and approved by the local and national authorities. Mice were housed within a specific pathogen free facility and maintained under standard housing conditions of a 14-10h light-dark cycle, 50-70% humidity, 19-21°C with free access to food and water in cages enriched with bedding material and gnawing sticks. Mtfp1 conditional mice (Mtfp1LoxP/LoxP) were generated by PolyGene AG (Switzerland) on a C57Bl6/N background. Cardiomyocyte specific Mtfp1 KO mice (cMKO; Myh6-Cretg/+Mtfp1LoxP/LoxP) were generated by crossing Mtfp1 conditional mice (Mtfp1LoxP/LoxP) with transgenic (Tg) mice expressing the Cre recombinase under the control of the cardiac alpha myosin heavy chain 6 promoter (Myh6-Cre)(Agah et al., 1997). Littermates that were homozygous for the conditional allele and negative for Myh6-Cre were used as controls (WT; Myh6-Cre+/+Mtfp1LoxP/LoxP).  Heterozygous whole-body Mtfp1 KO mice (Mtfp1+/-) were generated by crossing Mtfp1 conditional mice (Mtfp1LoxP/LoxP) with transgenic (Tg) mice expressing the Cre recombinase under the control of the CMV promoter (CMV-Cre)(Agah et al., 1997) and backcrossing to C57Bl6/N wild type (WT) mice. Cardiomyocyte specific Flag-MTFP1 Knock-In (KI) mice (cMKI; Myh6-Cretg/+Mtfp1+/+,, CAGttg+/) were generated by crossing an inducible mouse model for mCherry-P2A-FLAG-MTFP1 generated by PolyGene AG (Switzerland) on a C57Bl6/N background expression under the CAG promoter with mice expressing the Cre recombinase under the control of the cardiac alpha-(α) myosin heavy chain 6 promoter (Myh6-Cre). Total RNA was extracted by using TRIzol (Invitrogen, NY, USA) according to standard procedures. The Trizol/chloroform mixture was centrifuged at 12000g for 15 min at 4°C, the supernatant corresponding to the aqueous phase was transferred to a new tube, mixed with ethanol 70%, and then applied to an RNA mini-column extraction kit (NucleoSpin RNA kit, MACHEREY-NAGEL) according to the manufacturer’s recommendations. After DNA digestion, total RNA was eluted with RNase-free water and stored in liquid nitrogen. RNA was quantified by using the Bioanalyzer 2100 (Agilent) and only RNA samples (≥ 50 ng/µL) with an RNA integrity value (RIN) ≥ 6.8, OD260/280 ≥ 2, OD260/230 ≥ 2 were considered for the transcriptome profiling For RNA sequencing, libraries were built using a TruSeq Stranded mRNA library Preparation Kit (Illumina, USA) following the manufacturer’s protocol.

text: normal

characteristic: disease staging

text: wild type genotype

characteristic: genotype

characteristic: individual

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: heart

characteristic: organism part

text: Mus musculus


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: 1. Plate-forme Technologique Biomics – Centre de Ressources et Recherches Technologiques (C2RT), Institut Pasteur, Paris, France. 2. Hub de Bioinformatique et Biostatistique - Departement Biologie Computationnelle, Institut Pasteur, 75015 Paris, France

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

characteristic: broker name

text: house mouse

text: normal

text: wild type genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: heart

text: Mus musculus


characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

characteristic: common name

text: cardiomyopathy

text: pre-symptomatic stage

text: Mtfp1 knockout

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: heart

text: Mus musculus

characteristic: title


characteristic: ENA-CHECKLIST

text: public

characteristic: age

text: ArrayExpress

text: house mouse

characteristic: description

text: cardiomyopathy

characteristic: disease

text: onset of dilated cardiomyopathy

characteristic: disease staging

text: Mtfp1 knockout

characteristic: genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: heart

text: Mus musculus


text: <html>Trypanosoma brucei brucei </html>

characteristic: ArrayExpress-SPECIES

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: <html>Trypanosoma brucei brucei </html>

text: Trypanosoma brucei brucei

text: Trypanosoma brucei brucei

characteristic: subject id

text: <html>Trypanosoma brucei brucei </html>


text: Trypanosoma brucei brucei

text: SC

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Trypanosoma brucei brucei

text: Trypanosoma brucei brucei

text: Trypanosoma brucei brucei


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Unidad de Microbiologia, Hospital Universitario San Cecilio, Granada, Spain

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND00102, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: AND00138, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: active surveillance in response to outbreak

text: AND00067, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

text: not provided

text: Spain

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND00103, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: AND00045, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: AND00104, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

text: not provided

text: Spain

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND00032, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: AND00127, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: AND00133, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

text: not provided

text: Spain

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND00043, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: AND00033, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: AND00101, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

text: not provided

text: Spain

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND00012, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: AND00015, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: AND00016, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

text: Unidad de Microbiologia, Hospital Universitario San Cecilio, Granada, Spain

text: not provided

text: Spain

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND00020, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: AND00022, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: active surveillance in response to outbreak

text: AND00023, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

text: not provided

text: Spain

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND00025, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: AND00027, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: AND00035, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

text: not provided

text: Spain

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND00038, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: AND00039, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: AND00044, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

text: public

text: not provided

text: Spain

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND00047, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: Spain

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: AND00048, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

text: not provided

text: homo sapiens

text: not provided

text: not provided

text: not provided

text: AND00050, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region