text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: ulcerated

text: caecum

characteristic: site

text: IIA

characteristic: stage

text: Person ID008, Tumor tissue swab

characteristic: title


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:MASARYK UNIVERSITY

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: polypoid

characteristic: shape

text: rectum

text: IIA

text: Person ID009, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: F

text: ulcerated

text: colon NS

characteristic: site

text: IIIB

characteristic: stage

text: Person ID012, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: polypoid

text: colon sigmoideum

text: I

text: Person ID013, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: colon ascendens

text: IIA

text: Person ID014, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: F

text: voluminous

text: splenic flexure

text: IIIA

text: Person ID015, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: F

characteristic: sex

text: polypoid

characteristic: shape

text: caecum

text: IIIB

text: Person ID016, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: ulcerated

text: colon transversum

characteristic: site

text: IIIB

characteristic: stage

text: Person ID020, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: rectosigmoideum

text: I

text: Person ID021, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: voluminous

text: hepatic flexure

text: IVB

text: Person ID022, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: F

text: polypoid

text: colon transversum

text: IIA

text: Person ID023, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: ulcerated

characteristic: shape

text: colon sigmoideum

text: IIIB

text: Person ID024, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: F

text: ulcerated

text: rectosigmoideum

characteristic: site

text: I

characteristic: stage

text: Person ID025, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: polypoid

text: rectosigmoideum

text: IIA

text: Person ID028, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: rectosigmoideum

text: IIA

text: Person ID029, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: colon descendens

text: IIA

text: Person ID030, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: F

characteristic: sex

text: voluminous

characteristic: shape

text: colon transversum

text: IIA

text: Person ID032, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: ulcerated

text: colon descendens

characteristic: site

text: IIA

characteristic: stage

text: Person ID033, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: hepatic flexure

text: IIA

text: Person ID034, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: rectosigmoideum

text: I

text: Person ID038, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: colon sigmoideum

text: I

text: Person ID039, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: ulcerated

characteristic: shape

text: colon sigmoideum

text: I

text: Person ID040, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: ulcerated

text: rectum

characteristic: site

text: IIA

characteristic: stage

text: Person ID041, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: colon transversum

text: IIIB

text: Person ID042, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: polypoid

text: caecum

text: IIIA

text: Person ID043, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: colon sigmoideum

text: I

text: Person ID044, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: ulcerated

characteristic: shape

text: splenic flexure

text: IIIB

text: Person ID045, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: polypoid

text: caecum

characteristic: site

text: IIA

characteristic: stage

text: Person ID046, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: polypoid

text: caecum

text: IIIA

text: Person ID047, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: colon NS

text: IIA

text: Person ID048, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: F

text: voluminous

text: rectosigmoideum

text: IVA

text: Person ID050, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: ulcerated

characteristic: shape

text: colon sigmoideum

text: IIA

text: Person ID053, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: F

text: voluminous

text: rectum

characteristic: site

text: IIIC

characteristic: stage

text: Person ID054, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: hepatic flexure

text: IIIB

text: Person ID055, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: hepatic flexure

text: IIIC

text: Person ID056, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: M

text: polypoid

text: colon sigmoideum

text: IIIA

text: Person ID057, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: F

characteristic: sex

text: polypoid

characteristic: shape

text: colon descendens

text: IIA

text: Person ID058, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: ulcerated

text: colon ascendens

characteristic: site

text: IIA

characteristic: stage

text: Person ID059, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: colon sigmoideum

text: I

text: Person ID060, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: rectum

text: IVA

text: Person ID061, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: F

text: polypoid

text: colon ascendens

text: I

text: Person ID062, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: voluminous

characteristic: shape

text: colon ascendens

text: IIA

text: Person ID063, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: F

text: ulcerated

text: rectum

characteristic: site

text: IIA

characteristic: stage

text: Person ID064, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: caecum

text: IIIB

text: Person ID065, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: polypoid

text: rectosigmoideum

text: IIIA

text: Person ID066, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: F

text: voluminous

text: caecum

text: IIIC

text: Person ID067, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: F

characteristic: sex

text: ulcerated

characteristic: shape

text: colon transversum

text: IIB

text: Person ID069, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: ulcerated

text: colon NS

characteristic: site

text: I

characteristic: stage

text: Person ID070, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: polypoid

text: caecum

text: I

text: Person ID072, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: polypoid

text: colon sigmoideum

text: IIIB

text: Person ID073, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: hepatic flexure

text: IIIC

text: Person ID074, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: F

characteristic: sex

text: polypoid

characteristic: shape

text: rectum

text: I

text: Person ID075, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: ulcerated

text: colon sigmoideum

characteristic: site

text: IIIB

characteristic: stage

text: Person ID076, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: polypoid

text: rectum

text: I

text: Person ID078, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: rectosigmoideum

text: IIA

text: Person ID079, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: F

text: voluminous

text: colon descendens

text: IIIB

text: Person ID080, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: F

characteristic: sex

text: ulcerated

characteristic: shape

text: caecum

text: IIIC

text: Person ID081, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: voluminous

text: caecum

characteristic: site

text: IIA

characteristic: stage

text: Person ID083, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: caecum

text: IVA

text: Person ID084, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: caecum

text: IIIB

text: Person ID085, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: F

text: voluminous

text: colon transversum

text: IVB

text: Person ID087, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: ulcerated

characteristic: shape

text: rectum

text: IIIA

text: Person ID088, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: F

text: ulcerated

text: rectum

characteristic: site

text: IIA

characteristic: stage

text: Person ID090, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: hepatic flexure

text: IIIC

text: Person ID091, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: rectum

text: IIIC

text: Person ID092, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: colon transversum

text: IVA

text: Person ID093, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: ulcerated

characteristic: shape

text: splenic flexure

text: IIIA

text: Person ID095, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: F

text: voluminous

text: rectosigmoideum

characteristic: site

text: IIIA

characteristic: stage

text: Person ID096, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: rectum

text: IIIC

text: Person ID097, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: voluminous

text: caecum

text: IIIC

text: Person ID098, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: M

text: polypoid

text: caecum

text: IIA

text: Person ID100, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: polypoid

characteristic: shape

text: caecum

text: IIIC

text: Person ID101, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: F

text: voluminous

text: colon ascendens

characteristic: site

text: IIIC

characteristic: stage

text: Person ID102, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: voluminous

text: colon descendens

text: IIA

text: Person ID103, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: polypoid

text: colon sigmoideum

text: IIA

text: Person ID104, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: F

text: voluminous

text: caecum

text: IIIC

text: Person ID105, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: F

characteristic: sex

text: polypoid

characteristic: shape

text: colon sigmoideum

text: I

text: Person ID106, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: ulcerated

text: colon transversum

characteristic: site

text: IIA

characteristic: stage

text: Person ID107, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: rectosigmoideum

text: IIB

text: Person ID108, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: rectosigmoideum

text: IIA

text: Person ID111, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: F

text: polypoid

text: rectum

text: I

text: Person ID112, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: polypoid

characteristic: shape

text: colon NS

text: Person ID114, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: polypoid

text: colon transversum

characteristic: site

characteristic: stage

text: Person ID115, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: caecum

text: IIA

text: Person ID116, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: rectum

text: IIIB

text: Person ID117, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: rectosigmoideum

text: IIIC

text: Person ID118, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: F

characteristic: sex

text: ulcerated

characteristic: shape

text: colon transversum

text: IIIA

text: Person ID119, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: voluminous

text: colon sigmoideum

characteristic: site

text: IIIA

characteristic: stage

text: Person ID120, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: colon sigmoideum

text: IIIC

text: Person ID121, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: polypoid

text: colon transversum

text: IIA

text: Person ID122, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: F

text: polypoid

text: colon ascendens

text: Person ID123, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: ulcerated

characteristic: shape

text: caecum

text: IIA

text: Person ID124, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: F

text: voluminous

text: colon descendens

characteristic: site

text: IIA

characteristic: stage

text: Person ID125, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: colon ascendens

text: IIA

text: Person ID126, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: colon transversum

text: IIIC

text: Person ID127, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: M

text: polypoid

text: rectosigmoideum

text: IIIB

text: Person ID128, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: voluminous

characteristic: shape

text: colon ascendens

text: IIA

text: Person ID129, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: polypoid

text: colon ascendens

characteristic: site

characteristic: stage

text: Person ID130, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: colon ascendens

text: IIIB

text: Person ID134, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: colon transversum

text: IIA

text: Person ID135, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: rectum

text: IIIB

text: Person ID136, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: F

characteristic: sex

text: ulcerated

characteristic: shape

text: colon ascendens

text: I

text: Person ID137, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: F

text: polypoid

text: colon sigmoideum

characteristic: site

text: IIIA

characteristic: stage

text: Person ID138, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: polypoid

text: rectum

text: I

text: Person ID139, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: rectum

text: IIA

text: Person ID140, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: rectosigmoideum

text: I

text: Person ID141, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: F

characteristic: sex

text: ulcerated

characteristic: shape

text: rectosigmoideum

text: IIIC

text: Person ID142, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: F

text: polypoid

text: colon sigmoideum

characteristic: site

text: I

characteristic: stage

text: Person ID143, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: colon sigmoideum

text: IIIC

text: Person ID144, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: polypoid

text: colon descendens

text: IIA

text: Person ID145, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: rectosigmoideum

text: IIIB

text: Person ID146, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: F

characteristic: sex

text: ulcerated

characteristic: shape

text: colon sigmoideum

text: I

text: Person ID147, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: F

text: ulcerated

text: rectosigmoideum

characteristic: site

text: IIA

characteristic: stage

text: Person ID148, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: caecum

text: IIA

text: Person ID149, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: rectum

text: I

text: Person ID150, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: rectosigmoideum

text: IIB

text: Person ID151, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: F

characteristic: sex

text: ulcerated

characteristic: shape

text: colon ascendens

text: IIIB

text: Person ID152, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: ulcerated

text: colon sigmoideum

characteristic: site

text: IIIB

characteristic: stage

text: Person ID153, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: polypoid

text: colon sigmoideum

text: I

text: Person ID154, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: colon transversum

text: IIIB

text: Person ID156, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: M

text: polypoid

text: colon ascendens

text: IIA

text: Person ID157, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: ulcerated

characteristic: shape

text: colon ascendens

text: IIA

text: Person ID158, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: polypoid

text: colon ascendens

characteristic: site

text: I

characteristic: stage

text: Person ID159, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: rectum

text: IIIC

text: Person ID161, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: colon sigmoideum

text: I

text: Person ID162, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: F

text: polypoid

text: caecum

text: IIA

text: Person ID163, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: voluminous

characteristic: shape

text: colon transversum

text: IIA

text: Person ID164, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: ulcerated

text: rectosigmoideum

characteristic: site

text: IIA

characteristic: stage

text: Person ID165, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: rectosigmoideum

text: IIIB

text: Person ID166, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: polypoid

text: rectosigmoideum

text: I

text: Person ID167, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: hepatic flexure

text: IIIA

text: Person ID171, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: F

characteristic: sex

text: voluminous

characteristic: shape

text: caecum

text: IIA

text: Person ID172, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: F

text: voluminous

text: caecum

characteristic: site

text: IIA

characteristic: stage

text: Person ID173, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: polypoid

text: colon sigmoideum

text: IIIB

text: Person ID174, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: voluminous

text: colon sigmoideum

text: IIB

text: Person ID176, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: rectum

text: I

text: Person ID177, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: polypoid

characteristic: shape

text: rectum

text: I

text: Person ID179, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: ulcerated

text: hepatic flexure

characteristic: site

text: IIIC

characteristic: stage

text: Person ID181, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: colon ascendens

text: IIIB

text: Person ID182, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: polypoid

text: caecum

text: IIA

text: Person ID183, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: M

text: polypoid

text: rectosigmoideum

text: I

text: Person ID184, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: polypoid

characteristic: shape

text: colon transversum

text: Person ID185, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: F

text: voluminous

text: caecum

characteristic: site

text: IIA

characteristic: stage

text: Person ID186, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: polypoid

text: colon sigmoideum

text: I

text: Person ID187, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: polypoid

text: colon sigmoideum

text: Person ID189, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: hepatic flexure

text: IIIC

text: Person ID190, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: ulcerated

characteristic: shape

text: colon sigmoideum

text: I

text: Person ID192, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: polypoid

text: colon transversum

characteristic: site

text: IIA

characteristic: stage

text: Person ID193, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: rectum

text: IIIA

text: Person ID194, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: polypoid

text: colon NS

text: Person ID195, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: M

text: polypoid

text: colon ascendens

text: IIIB

text: Person ID196, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: F

characteristic: sex

text: ulcerated

characteristic: shape

text: rectosigmoideum

text: IIIA

text: Person ID197, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: ulcerated

text: colon sigmoideum

characteristic: site

text: IIIA

characteristic: stage

text: Person ID198, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: polypoid

text: colon ascendens

text: IIIB

text: Person ID199, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: voluminous

text: colon descendens

text: IIA

text: Person ID200, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: F

text: voluminous

text: hepatic flexure

text: IIA

text: Person ID201, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: F

characteristic: sex

text: ulcerated

characteristic: shape

text: rectosigmoideum

text: IIA

text: Person ID202, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: F

text: ulcerated

text: caecum

characteristic: site

text: I

characteristic: stage

text: Person ID203, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: rectosigmoideum

text: I

text: Person ID205, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: polypoid

text: colon NS

text: IV

text: Person ID206, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: caecum

text: IIIB

text: Person ID207, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: polypoid

characteristic: shape

text: colon sigmoideum

text: I

text: Person ID208, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: ulcerated

text: colon sigmoideum

characteristic: site

text: IIA

characteristic: stage

text: Person ID209, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: rectosigmoideum

text: IIA

text: Person ID210, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: colon sigmoideum

text: IIA

text: Person ID212, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: F

text: polypoid

text: colon sigmoideum

text: IIA

text: Person ID213, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: ulcerated

characteristic: shape

text: hepatic flexure

text: IIA

text: Person ID214, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: F

text: voluminous

text: caecum

characteristic: site

text: IIA

characteristic: stage

text: Person ID215, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: caecum

text: IIA

text: Person ID216, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: rectosigmoideum

text: IIIB

text: Person ID217, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: rectosigmoideum

text: IIA

text: Person ID220, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: polypoid

characteristic: shape

text: colon ascendens

text: Person ID221, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: polypoid

text: rectosigmoideum

characteristic: site

text: I

characteristic: stage

text: Person ID222, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: polypoid

text: rectosigmoideum

text: I

text: Person ID223, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: polypoid

text: colon ascendens

text: IIA

text: Person ID224, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: colon sigmoideum

text: IIA

text: Person ID226, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: F

characteristic: sex

text: voluminous

characteristic: shape

text: caecum

text: IIA

text: Person ID228, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: F

text: ulcerated

text: hepatic flexure

characteristic: site

text: IIA

characteristic: stage

text: Person ID229, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: caecum

text: IIIC

text: Person ID230, Tumor tissue swab


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: rectosigmoideum

text: IIA

text: Person ID231, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Tumor tissue swab

characteristic: bio material

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: caecum

text: IIA

text: Person ID232, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: ulcerated

characteristic: shape

text: rectum

text: IVA

text: Person ID233, Tumor tissue swab


text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: ulcerated

text: hepatic flexure

characteristic: site

text: I

characteristic: stage

text: Person ID234, Tumor tissue swab

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Tumor tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: colon sigmoideum

text: IIA

text: Person ID235, Tumor tissue swab


text: Staphylococcus aureus

characteristic: ArrayExpress-SPECIES

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Staphylococcus aureus

text: Staphylococcus aureus

text: Staphylococcus aureus

characteristic: subject id


text: Staphylococcus aureus

text: 3930/02 Cat

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Staphylococcus aureus

characteristic: common name

text: Staphylococcus aureus

text: Staphylococcus aureus


text: Staphylococcus aureus

text: 3930/01 Cat

text: SC

text: public

text: Staphylococcus aureus

text: Staphylococcus aureus

characteristic: organism

text: Staphylococcus aureus


text: Staphylococcus aureus

text: 3975/01 macaque

text: SC

text: public

text: Staphylococcus aureus

text: Staphylococcus aureus

text: Staphylococcus aureus


text: Staphylococcus aureus

text: 3821/01 sheep

text: SC

text: public

text: Staphylococcus aureus

text: Staphylococcus aureus

text: Staphylococcus aureus


text: Staphylococcus aureus

text: 3975/02 macaque

text: SC

text: public

text: Staphylococcus aureus

text: Staphylococcus aureus

text: Staphylococcus aureus


text: Staphylococcus aureus

text: 3821/02 sheep

text: SC

text: public

text: Staphylococcus aureus

text: Staphylococcus aureus

text: Staphylococcus aureus


text: Staphylococcus aureus

text: 3978/01 Sub Cat

text: SC

text: public

text: Staphylococcus aureus

text: Staphylococcus aureus

text: Staphylococcus aureus


text: Staphylococcus aureus

text: 3461/02 sm macaque

text: SC

text: public

text: Staphylococcus aureus

text: Staphylococcus aureus

text: Staphylococcus aureus


text: Staphylococcus lentus

text: 3922 dog

text: SC

text: public

text: Staphylococcus lentus

text: Staphylococcus lentus

text: Staphylococcus lentus


text: Streptococcus uberis

text: 5518 C

text: SC

text: public

text: Streptococcus uberis

text: Streptococcus uberis

text: Streptococcus uberis


text: Streptococcus uberis

text: 4985 A

text: SC

text: public

text: Streptococcus uberis

text: Streptococcus uberis

text: Streptococcus uberis


text: Streptococcus uberis

text: 5786 E

text: SC

text: public

text: Streptococcus uberis

text: Streptococcus uberis

text: Streptococcus uberis


text: Streptococcus uberis

text: 6254 D

text: SC

text: public

text: Streptococcus uberis

text: Streptococcus uberis

text: Streptococcus uberis


text: Streptococcus uberis

text: 6149 J

text: SC

text: public

text: Streptococcus uberis

text: Streptococcus uberis

text: Streptococcus uberis


text: Streptococcus uberis

text: 4985 H

text: SC

text: public

text: Streptococcus uberis

text: Streptococcus uberis

text: Streptococcus uberis


text: Escherichia coli

text: SC

text: public

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli


text: Staphylococcus aureus

text: SC

text: public

text: Staphylococcus aureus

text: Staphylococcus aureus

text: Staphylococcus aureus


text: MASARYK UNIVERSITY

text: public

text: Adjacent healthy tissue swab

characteristic: bio material

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: ulcerated

characteristic: shape

text: colon sigmoideum

characteristic: site

text: IIIB

text: Person ID024, Adjacent healthy tissue swab


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Adjacent healthy tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: colon sigmoideum

text: IIA

characteristic: stage

text: Person ID053, Adjacent healthy tissue swab

characteristic: title


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Adjacent healthy tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

text: caecum

text: IIIB

text: Person ID065, Adjacent healthy tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Adjacent healthy tissue swab

text: human

characteristic: common name

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: polypoid

text: caecum

text: IIIC

text: Person ID101, Adjacent healthy tissue swab


text: MASARYK UNIVERSITY

text: public

text: Adjacent healthy tissue swab

characteristic: bio material

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: ulcerated

text: rectosigmoideum

text: IIA

text: Person ID111, Adjacent healthy tissue swab


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: MASARYK UNIVERSITY

text: public

text: Adjacent healthy tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: polypoid

characteristic: shape

text: colon transversum

characteristic: site

text: IIA

text: Person ID122, Adjacent healthy tissue swab


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Adjacent healthy tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: caecum

text: IIA

characteristic: stage

text: Person ID124, Adjacent healthy tissue swab

characteristic: title


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Adjacent healthy tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: rectum

text: IIIB

text: Person ID136, Adjacent healthy tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Adjacent healthy tissue swab

text: human

characteristic: common name

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: M

text: polypoid

text: colon sigmoideum

text: IIIB

text: Person ID174, Adjacent healthy tissue swab


text: MASARYK UNIVERSITY

text: public

text: Adjacent healthy tissue swab

characteristic: bio material

text: human

text: Homo sapiens

characteristic: primer

text: Homo sapiens

characteristic: seq run

text: M

characteristic: sex

text: ulcerated

text: rectum

text: I

text: Person ID177, Adjacent healthy tissue swab


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: MASARYK UNIVERSITY

text: public

text: Adjacent healthy tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: F

text: ulcerated

characteristic: shape

text: caecum

characteristic: site

text: I

text: Person ID203, Adjacent healthy tissue swab


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MASARYK UNIVERSITY

text: public

text: Adjacent healthy tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: ulcerated

text: hepatic flexure

text: IIA

characteristic: stage

text: Person ID214, Adjacent healthy tissue swab

characteristic: title


text: MASARYK UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Adjacent healthy tissue swab

text: human

text: Homo sapiens

text: Homo sapiens

text: M

text: polypoid

text: colon ascendens

text: IIA

text: Person ID224, Adjacent healthy tissue swab


text: MASARYK UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Adjacent healthy tissue swab

text: human

characteristic: common name

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: F

text: voluminous

text: caecum

text: IIA

text: Person ID228, Adjacent healthy tissue swab


text: Adult

text: eye

characteristic: ArrayExpress-PHENOTYPE

text: male

characteristic: ArrayExpress-SEX

text: Astatotilapia calliptera

characteristic: ArrayExpress-SPECIES

text: Male

characteristic: GENDER

text: SC

text: public

characteristic: PHENOTYPE

text: eastern happy

text: Astatotilapia calliptera

text: Astatotilapia calliptera


text: Adult

text: gills

text: male

text: Astatotilapia calliptera

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Male

text: SC

text: public

text: eastern happy

text: Astatotilapia calliptera

text: Astatotilapia calliptera


text: Adult

text: liver

text: male

text: Astatotilapia calliptera

characteristic: External Id

text: Male

text: SC

text: public

text: eastern happy

text: Astatotilapia calliptera

text: Astatotilapia calliptera

characteristic: title


text: Kidney

text: Mus musculus

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: house mouse

text: Mus musculus

text: Kidney

characteristic: phenotype

text: Mus musculus

characteristic: subject id


text: Campylobacter jejuni

text: Campylobacter

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Campylobacter jejuni

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Streptococcus agalactiae

text: SC

text: public

text: Streptococcus agalactiae

characteristic: common name

text: Streptococcus agalactiae

characteristic: organism

text: Streptococcus agalactiae


E-MTAB-8845:Col-0 with infection 1

text: JIANGSU NORMAL UNIVERSITY

text: public

text: E-MTAB-8845:Col-0 with infection 1

tag: Namespace:JIANGSU NORMAL UNIVERSITY

unit: day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: Protocols: Samples were taken of 10 days old plants in triplicates. Plants were treated 12 hours to Phytophthora parasitica as a treatment or V8 plugs as a mock. Arabidopsis thaliana plants were grown on half Murashige-Skoog (MS) media containing sucrose at 22°C. Total RNA was extracted using the Trizol reagent combined with RNAprep Pure Plant Plus Kit (TIANGEN BIOTECH (BEIJING) CO, China, product #DP441. Library preparation was performed by Biomics (Beijing) Biotech Co., Ltd.

characteristic: description

characteristic: ecotype

text: wild type genotype

characteristic: genotype

text: Phytophthora parasitica

characteristic: infect

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole organism

characteristic: organism part

text: Arabidopsis thaliana

text: Col-0 with infection 1


E-MTAB-8845:Col-0 with infection2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIANGSU NORMAL UNIVERSITY

characteristic: INSDC center name

text: public

text: E-MTAB-8845:Col-0 with infection2

text: ArrayExpress

text: thale cress

text: wild type genotype

text: Phytophthora parasitica

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole organism

text: Arabidopsis thaliana

text: Col-0 with infection2

characteristic: title


E-MTAB-8845:Col-0 with infection3

text: JIANGSU NORMAL UNIVERSITY

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-8845:Col-0 with infection3

text: ArrayExpress

text: thale cress

text: wild type genotype

text: Phytophthora parasitica

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole organism

text: Arabidopsis thaliana

text: Col-0 with infection3


E-MTAB-8845:Col-0 without infection 1

text: JIANGSU NORMAL UNIVERSITY

text: public

text: E-MTAB-8845:Col-0 without infection 1

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: thale cress

characteristic: common name

text: wild type genotype

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: whole organism

text: Arabidopsis thaliana

text: Col-0 without infection 1


E-MTAB-8845:Col-0 without infection 2

text: JIANGSU NORMAL UNIVERSITY

text: public

text: E-MTAB-8845:Col-0 without infection 2

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: description

characteristic: ecotype

text: wild type genotype

characteristic: genotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole organism

text: Arabidopsis thaliana

text: Col-0 without infection 2


E-MTAB-8845:Col-0 without infection 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: JIANGSU NORMAL UNIVERSITY

text: public

text: E-MTAB-8845:Col-0 without infection 3

text: ArrayExpress

text: thale cress

text: wild type genotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole organism

characteristic: organism part

text: Arabidopsis thaliana

text: Col-0 without infection 3


E-MTAB-8845:gsnor1 with infection 1

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIANGSU NORMAL UNIVERSITY

characteristic: INSDC center name

text: public

text: E-MTAB-8845:gsnor1 with infection 1

text: ArrayExpress

text: thale cress

text: Phytophthora parasitica

characteristic: infect

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole organism

text: Arabidopsis thaliana

text: gsnor1 with infection 1


E-MTAB-8845:gsnor1 with infection 2

text: JIANGSU NORMAL UNIVERSITY

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-8845:gsnor1 with infection 2

text: ArrayExpress

text: thale cress

text: Phytophthora parasitica

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole organism

text: Arabidopsis thaliana

text: gsnor1 with infection 2

characteristic: title


E-MTAB-8845:gsnor1 with infection 3

text: JIANGSU NORMAL UNIVERSITY

text: public

characteristic: SRA accession

text: E-MTAB-8845:gsnor1 with infection 3

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: thale cress

characteristic: common name

text: Phytophthora parasitica

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole organism

text: Arabidopsis thaliana

text: gsnor1 with infection 3


E-MTAB-8845:gsnor1 without infection 1

text: JIANGSU NORMAL UNIVERSITY

text: public

text: E-MTAB-8845:gsnor1 without infection 1

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: description

characteristic: ecotype

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: whole organism

text: Arabidopsis thaliana

text: gsnor1 without infection 1


E-MTAB-8845:gsnor1 without infection 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: JIANGSU NORMAL UNIVERSITY

text: public

text: E-MTAB-8845:gsnor1 without infection 2

text: ArrayExpress

text: thale cress

characteristic: genotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole organism

characteristic: organism part

text: Arabidopsis thaliana

text: gsnor1 without infection 2


E-MTAB-8845:gsnor1 without infection 3

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: JIANGSU NORMAL UNIVERSITY

characteristic: INSDC center name

text: public

text: E-MTAB-8845:gsnor1 without infection 3

text: ArrayExpress

text: thale cress

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole organism

text: Arabidopsis thaliana

text: gsnor1 without infection 3


E-MTAB-8854:Sample 1

text: Stazione Zoologica Anton Dohrn

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-8854:Sample 1

tag: Namespace:Stazione Zoologica Anton Dohrn

text: ArrayExpress

text: Protocols: Cultures were collected by filtration onto 1.2 µm pore-size membrane filters (RAWP04700 Millipore) RNA was extracted with Quick-RNA™ Fungal/Bacterial Miniprep Kit (Zymo research) according to manufacturer’s instructions with the exception of the beads for the cell lysis that were replaced with acid washed glass beads. Single-end (SE) libraries were prepared using a Beckman Biomek FX and the Illumina® TruSeq® Stranded Total RNA Sample Preparation kit, with poly-A selection and starting with 500 ng total RNA.

text: sexually reproducing cells

characteristic: growth condition

text: not applicable

characteristic: isolate

text: Pseudo-nitzschia multistriata

text: Pseudo-nitzschia multistriata

text: Cross T1 replicate A

characteristic: replicate

text: Pseudo-nitzschia multistriata

text: MT+ / MT-

characteristic: sex

characteristic: strain

text: Sample 1


E-MTAB-8854:Sample 10

text: Stazione Zoologica Anton Dohrn

text: public

characteristic: SRA accession

text: E-MTAB-8854:Sample 10

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: description

text: sexually reproducing cells

text: not applicable

text: Pseudo-nitzschia multistriata

text: Pseudo-nitzschia multistriata

text: Cross T3 replicate B

text: Pseudo-nitzschia multistriata

text: MT+ / MT-

text: Sample 10

characteristic: title


E-MTAB-8854:Sample 11

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Stazione Zoologica Anton Dohrn

text: public

text: E-MTAB-8854:Sample 11

text: ArrayExpress

text: sexually reproducing cells

text: not applicable

text: Pseudo-nitzschia multistriata

characteristic: organism

text: Pseudo-nitzschia multistriata

text: Cross T1 replicate C

text: Pseudo-nitzschia multistriata

text: MT+ / MT-

text: Sample 11


E-MTAB-8854:Sample 12

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Stazione Zoologica Anton Dohrn

characteristic: INSDC center name

text: public

text: E-MTAB-8854:Sample 12

text: ArrayExpress

text: sexually reproducing cells

text: not applicable

text: Pseudo-nitzschia multistriata

text: Pseudo-nitzschia multistriata

text: Cross T2 replicate C

text: Pseudo-nitzschia multistriata

text: MT+ / MT-

text: Sample 12


E-MTAB-8854:Sample 13

text: Stazione Zoologica Anton Dohrn

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-8854:Sample 13

text: ArrayExpress

text: vegetative cells

text: not applicable

text: Pseudo-nitzschia multistriata

text: Pseudo-nitzschia multistriata

text: MT- T2 replicate C

text: Pseudo-nitzschia multistriata

text: MT-

text: Sample 13


E-MTAB-8854:Sample 14

text: Stazione Zoologica Anton Dohrn

text: public

text: E-MTAB-8854:Sample 14

text: ArrayExpress

text: vegetative cells

characteristic: growth condition

text: not applicable

characteristic: isolate

text: Pseudo-nitzschia multistriata

text: Pseudo-nitzschia multistriata

text: MT+ T2 replicate C

characteristic: replicate

text: Pseudo-nitzschia multistriata

text: MT+

text: Sample 14


E-MTAB-8854:Sample 15

text: Stazione Zoologica Anton Dohrn

text: public

characteristic: SRA accession

text: E-MTAB-8854:Sample 15

text: ArrayExpress

text: sexually reproducing cells

text: not applicable

text: Pseudo-nitzschia multistriata

text: Pseudo-nitzschia multistriata

text: Cross T3 replicate C

text: Pseudo-nitzschia multistriata

text: MT+ / MT-

characteristic: sex

characteristic: strain

text: Sample 15


E-MTAB-8854:Sample 2

text: Stazione Zoologica Anton Dohrn

text: public

text: E-MTAB-8854:Sample 2

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: description

text: sexually reproducing cells

text: not applicable

text: Pseudo-nitzschia multistriata

text: Pseudo-nitzschia multistriata

text: Cross T2 replicate A

text: Pseudo-nitzschia multistriata

text: MT+ / MT-

text: Sample 2


E-MTAB-8854:Sample 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Stazione Zoologica Anton Dohrn

text: public

text: E-MTAB-8854:Sample 3

text: ArrayExpress

text: vegetative cells

text: not applicable

text: Pseudo-nitzschia multistriata

text: Pseudo-nitzschia multistriata

text: MT- T2 replicate A

text: Pseudo-nitzschia multistriata

text: MT-

text: Sample 3

characteristic: title


E-MTAB-8854:Sample 4

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Stazione Zoologica Anton Dohrn

text: public

text: E-MTAB-8854:Sample 4

text: ArrayExpress

text: vegetative cells

text: not applicable

text: Pseudo-nitzschia multistriata

characteristic: organism

text: Pseudo-nitzschia multistriata

text: MT+ T2 replicate A

text: Pseudo-nitzschia multistriata

text: MT+

text: Sample 4


E-MTAB-8854:Sample 5

text: Stazione Zoologica Anton Dohrn

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-8854:Sample 5

text: ArrayExpress

text: sexually reproducing cells

text: not applicable

text: Pseudo-nitzschia multistriata

text: Pseudo-nitzschia multistriata

text: Cross T3 replicate A

text: Pseudo-nitzschia multistriata

text: MT+ / MT-

text: Sample 5


E-MTAB-8854:Sample 6

text: Stazione Zoologica Anton Dohrn

text: public

characteristic: INSDC status

text: E-MTAB-8854:Sample 6

text: ArrayExpress

text: sexually reproducing cells

characteristic: growth condition

text: not applicable

characteristic: isolate

text: Pseudo-nitzschia multistriata

text: Pseudo-nitzschia multistriata

text: Cross T1 replicate B

text: Pseudo-nitzschia multistriata

text: MT+ / MT-

text: Sample 6


E-MTAB-8854:Sample 7

text: Stazione Zoologica Anton Dohrn

text: public

characteristic: SRA accession

text: E-MTAB-8854:Sample 7

text: ArrayExpress

text: sexually reproducing cells

text: not applicable

text: Pseudo-nitzschia multistriata

text: Pseudo-nitzschia multistriata

text: Cross T2 replicate B

characteristic: replicate

text: Pseudo-nitzschia multistriata

text: MT+ / MT-

characteristic: sex

text: Sample 7


E-MTAB-8854:Sample 8

text: Stazione Zoologica Anton Dohrn

text: public

text: E-MTAB-8854:Sample 8

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: vegetative cells

text: not applicable

text: Pseudo-nitzschia multistriata

text: Pseudo-nitzschia multistriata

text: MT- T2 replicate B

text: Pseudo-nitzschia multistriata

text: MT-

characteristic: strain

text: Sample 8


E-MTAB-8854:Sample 9

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Stazione Zoologica Anton Dohrn

text: public

text: E-MTAB-8854:Sample 9

text: ArrayExpress

characteristic: description

text: vegetative cells

text: not applicable

text: Pseudo-nitzschia multistriata

text: Pseudo-nitzschia multistriata

text: MT+ T2 replicate B

text: Pseudo-nitzschia multistriata

text: MT+

text: Sample 9


text: Treponema pallidum subsp. pallidum

characteristic: ArrayExpress-SPECIES

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: syphilis treponeme

characteristic: common name

text: Treponema pallidum subsp. pallidum

text: Treponema pallidum subsp. pallidum

characteristic: subject id

characteristic: title


text: Treponema paraluiscuniculi

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Treponema paraluiscuniculi

text: Treponema paraluiscuniculi

characteristic: organism

text: Treponema paraluiscuniculi


text: Dracunculus medinensis

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Guinea worm

text: Dracunculus medinensis

text: Dracunculus medinensis


CLIB 214

text: public

text: CLIB 214

tag: Namespace:Comenius University, Faculty of Mathematics, Physics and Informatics

text: Candida parapsilosis CBS 604 (CLIB 214, ATCC 22019, NRRL Y-12969) is the type strain, originally isolated from a patient with diarrhea in Puerto Rico by Ashford (1928)

characteristic: isolation source

text: Candida parapsilosis

text: Candida parapsilosis


characteristic: ENA-CHECKLIST

text: SNU

text: public

text: mouse gut metagenome

text: mouse gut metagenome


characteristic: ENA-FIRST-PUBLIC

text: public

tag: Namespace:GFZ German Research Centre for Geosciences

characteristic: collection date

text: marine tidal flow zone

characteristic: environment (biome)

text: saline marsh

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: soil

characteristic: environmental package

text: Germany

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Schleswig-Holstein

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: soil metagenome

text: universal and archea-specific primers: uni515F/uni806R, Arch349F/Arch806R

characteristic: pcr primers

text: ElymusGxE

characteristic: project name

text: soil metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GFZ German Research Centre for Geosciences

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: marine tidal flow zone

characteristic: environment (biome)

text: saline marsh

text: sediment

text: soil

text: Germany

text: Schleswig-Holstein

text: mimarks-survey

text: soil metagenome

characteristic: organism

text: ElymusGxE

text: soil metagenome

text: Illumina MiSeq

text: soil

characteristic: title


text: University of Milan-Bicocca

text: public

tag: Namespace:University of Milan-Bicocca

text: effect of prebiotics and probiotics treatment on human gut

characteristic: description

text: human

text: gut

characteristic: environment (feature)

text: tissue

characteristic: environment (material)

text: Italy

characteristic: geographic location (country and/or sea)

text: 45.4642° N

characteristic: geographic location (latitude)

text: 9.1900° E

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: uncultured bacterium

text: Nathurha

characteristic: project name

text: uncultured bacterium

text: Miseq Illumina

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Milan-Bicocca

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: human

text: gut

text: tissue

text: Italy

text: 45.4642° N

text: 9.1900° E

text: human-gut

text: uncultured bacterium

text: Nathurha

text: uncultured bacterium

text: Miseq Illumina


text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: fen

characteristic: environment (biome)

text: sea shore

characteristic: environment (feature)

text: peat soil

text: soil

characteristic: environmental package

text: Germany

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

text: Mecklenburg-Vorpommern, NE Germany

characteristic: geographic location (region and locality)

text: mimarks-survey

text: metagenome

characteristic: organism

text: F- 341(CCTACGGGNGGCWGCAG) R-805 (GACTACHVGGGTATCTAATCC)

characteristic: pcr primers

text: Baltic Transcoast drought microbes

text: metagenome

text: Illumina MiSeq v3 2x300bp

text: soil

characteristic: soil environmental package

text: bacteria and archaea

characteristic: subspecific genetic lineage

text: 16S rRNA

characteristic: target gene

text: 16S V4

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: fen

text: fen

text: peat soil

characteristic: environment (material)

text: soil

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mecklenburg-Vorpommern, NE Germany

text: mimarks-survey

characteristic: investigation type

text: metagenome

text: Baltic Transcoast drought microbes

characteristic: project name

text: metagenome

text: Illumina MiSeq v3 2x300bp

characteristic: sequencing method

text: soil

text: bacteria and archaea

text: 16S rRNA

text: 16S V4


text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: fen

characteristic: environment (biome)

text: sea shore

characteristic: environment (feature)

text: peat soil

text: soil

characteristic: environmental package

text: Germany

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

text: Mecklenburg-Vorpommern, NE Germany

characteristic: geographic location (region and locality)

text: mimarks-survey

text: metagenome

characteristic: organism

text: F-349(gYg CAS CAg KCg MgA AW)R-806(GGACTACVSGGGTATCTAAT)

characteristic: pcr primers

text: Baltic Transcoast drought microbes

text: metagenome

text: Illumina MiSeq v3 2x300bp

text: soil

characteristic: soil environmental package

text: bacteria and archaea

characteristic: subspecific genetic lineage

text: 16S rRNA

characteristic: target gene

text: 16S V4

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: fen

text: fen

text: peat soil

characteristic: environment (material)

text: soil

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mecklenburg-Vorpommern, NE Germany

text: mimarks-survey

characteristic: investigation type

text: metagenome

text: Baltic Transcoast drought microbes

characteristic: project name

text: metagenome

text: Illumina MiSeq v3 2x300bp

text: soil

text: bacteria and archaea

text: 16S rRNA

text: 16S V4

characteristic: title


text: Ludwig-Maximilians University

text: public

characteristic: SRA accession

tag: Namespace:Ludwig-Maximilians University

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: myoblast

characteristic: cell type

text: house mouse

characteristic: common name

text: Protocols: Pmi28 myoblasts were washed with PBS, detached using 0.25 % Trypsin/1 mM EDTA for 3 min and collected in a centrifuge tube. After centrifugation for 4 min at 1300 g, cells were washed with PBS and centrifuged again. For native ChIP-seq, the pellet obtained from three 150 mm cell culture plates roughly corresponding to 15 Mio myoblasts was directly snap frozen in liquid nitrogen and kept at -80º C. For Hi-C, cells were re-suspended in medium to a final volume of 10 ml in 15 ml falcon tubes. 666 μl of 16% formaldehyde were added to the tube (resulting in a final concentration of 1% formaldehyde ); the tube was briefly shaken and then rotated for exactly 10 min at 21º C. To quench the reaction, 593 µl of 2.5 M glycine were added; the tube was briefly shaken and left rotating for 5 min. After quenching, tubes were centrifuged for 5 min at 2,000 g and the supernatant was discarded. Cells were resuspended in 1.5 ml PBS, transferred into 2 ml tubes, centrifuged at 2,000 g for 5 min at RT and the supernatant was discarded. The pellets were snap-frozen in liquid nitrogen and kept at -80º C. Myotube samples were collected as follows in order to separate differentiated myotubes from undifferentiated myoblasts: first, myotubes were gently trypsinized using 0.025 % Trypsin/0.1 mM EDTA; when myotubes detached, leaving the majority of myoblasts still attached to the bottom of the dish, the supernatant containing myotubes and a proportion of myoblasts was transferred to a fresh 150 mm cell culture dish. The remaining myoblasts were allowed to re-adhere to the dish bottom, whereas myotubes did not re-adhere and thus could be collected with the supernatant. After centrifugation for 4 min at 1300 g, cells were washed with PBS and centrifuged again. For native ChIP-seq, the pellet obtained from three 150 mm cell culture plates roughly corresponding to 10 Mio myotubes was snap frozen in liquid nitrogen and kept at -80º C. For Hi-C, myotubes were fixed, quenched and frozen in the same way as myoblasts. We estimated that our myotube samples contained 10-20% of myoblasts. Mouse myoblast cell line were grown in Nutrient Mixture F-10 Ham supplemented with 20% fetal bovine serum (FBS) and 1% Penicillin/Streptomycin at 37°C and 5% CO2. For differentiation, cells were seeded at a density of 8 x 104 cells/cm2 and incubated in differentiation medium (high glucose DMEM supplemented with 1% Penicillin/Streptomycin and 2% horse serum) at 37°C and 5% CO2. Differentiation medium was replaced every 2 days. Typically, after 3-4 days a sufficient number of myotubes formed and after 5-6 days they start to contract. The following nChIP-seq protocol was adapted from (Punzeler et al., 2017) and (Link et al., 2018). Immunoprecipitations were carried out with S1 mononucleosomes derived from Pmi28 myoblasts and Pmi28 myotubes. nChIP-seq experiments were performed in independent duplicates. Per immunoprecipitation, 5 Mio cells were used. Cells were resuspended in 750 µl PBS + 1 x PI + 0.3 % Triton X-100 and incubated for 10 min at 4 °C while rotating. The cell lysate was centrifuged for 10 min at 3,000 g and 4°C, the pellet was resuspended in 625 µl PBS + PI and centrifuged for 5 min at 3,000 g at 4°C. Supernatant was carefully removed and the pellet was resuspended in 62.5 µl EX100 (10 mM HEPES pH 7.6, 100 mM NaCl, 1.5 mM MgCl2, 0.5 mM EGTA, 10 % (v/v) glycerol, 10 mM β-glycerol phosphate) + 1x PI + 1 mM DTT and transferred into a DNA low binding tube. CaCl2 concentration was adjusted to 2 mM and 0.1875 µl MNase (1 U/µl) were added. MNase digest was carried out for 20 min at 26 °C. The reaction was stopped by the addition of EDTA to a final concentration of 10 mM and the suspension was centrifuged at 13,300 rpm for 30 min at 4 °C in a tabletop centrifuge. The supernatant (S1 mononucleosomes) was transferred into a fresh DNA low binding tube and filled up to 500 µl with EX100 + 1x PI + 1 mM DTT. 25 µl (5 %) were saved as input. 5 µg of antibody (anti-RNA polymerase II CTD repeat YSPTSPS, 8WG16, Abcam ab817) were added per IP (5 Mio cells) in 500 µl and incubated with mononucleosomes at 4 °C overnight while rotating. On the next day, magnetic beads (Dynabeads Protein G, Thermo Fisher) were washed 3 times with EX100 + 1 x PI + 1 mM DTT (500 µl/wash), resuspended in 30 µl EX100 + 1 x PI + 1 mM DTT per IP, added to the antibody-mononucleosome suspension and rotated at 4 °C for 3 h. A beads-only IP served as negative control. Washing steps were conducted using 500 µl of buffer per washing step and samples were rotated at 4 °C for 5 min. Beads were magnetically separated after each washing step. Beads were washed twice with WB1 (10 mM Tris pH 7.5, 1 mM EDTA, 0.1 % SDS, 0.1 % sodiumdeoxycholate, 1 % Triton X-100), twice with WB2 (10 mM Tris pH 7.5, 1 mM EDTA, 0.1 % SDS, 0.1 % sodiumdeoxycholate, 1 % Triton X-100, 150 mM NaCl), once with TE + 0.2 % Triton-X 100 and once with TE buffer. Washed beads were resuspended in 100 µl TE buffer. To the input DNA sample, 75 µl TE were added. 3 µl of 10 % SDS and 5 µl of proteinase K were added and the suspensions were incubated 1 h at 65 °C. After brief vortexing, suspensions were magnetically separated and supernatant was transferred into DNA low binding tubes (Eppendorf). Beads were washed with 100 µl TE + 0.5 M NaCl, vortexed briefly, magnetically separated and the supernatant added to the first supernatant. For input DNA, 100 µl TE + 0.5 M NaCl were added. Eluted IP DNA and input DNA were Phenol/Chloroform/Isoamylalcohol extracted using MaXtract high density tubes (Qiagen) and ethanol precipitated according to a standard protocol. After extraction, the IP DNA pellets were resuspended in 12 µl 10 mM Tris-HCl pH 7.5 and the input DNA pellet was resuspended in 20 µl 10 mM Tris-HCl pH 7.5. DNA concentrations were determined via the Qubit dsDNA High Sensitivity Kit (Invitrogen) and DNA size was analyzed on a DNA 1000 BioAnalyzer chip (Agilent Technologies). Illumina sequencing libraries were prepared using the NEBNext Ultra II DNA Library Prep Kit for Illumina (New England Biolabs) and the NEBNext Multiplex Oligos for Illumina (New England Biolabs) according to the manufacturer’s instructions. The number of amplification cycles was scaled according to the amount of input material, amplification was validated by measuring DNA concentrations using the Qubit dsDNA High Sensitivity Kit (Invitrogen) and library quality was determined using a Bioanalyzer (Agilent Technologies) and a DNA 1000 Bioanalyzer chip (Agilent Technologies).

characteristic: description

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: skeletal muscle tissue

characteristic: organism part

text: Mus musculus