characteristic: ENA-CHECKLIST

text: public

text: 34580:cf4ac0f7-9dff-4bb9-923b-abe04d43a040

text: GFBIO

text: marine benthic biome [ENVO:01000024]

text: marine benthic feature [ENVO:01000105]

text: deep marine sediment [ENVO:00002113]

characteristic: environment (material)

text: sediment

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Laptev Sea

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: marine sediment metagenome

characteristic: pangaea event label

text: ERC ABYSS

characteristic: project name

characteristic: sample description

text: marine sediment metagenome

text: sediment

characteristic: sediment environmental package

text: 454 GS FLX

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

characteristic: total depth of water column


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 34579:cf4ac0f7-9dff-4bb9-923b-abe04d43a040

tag: Namespace:Max Planck Institute for Marine Microbiology

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

text: surface sediment sample (0-1 cm) from the Laptev Sea continental slope (Arctic Ocean)

characteristic: description

text: marine benthic biome [ENVO:01000024]

characteristic: environment (biome)

text: marine benthic feature [ENVO:01000105]

characteristic: environment (feature)

text: deep marine sediment [ENVO:00002113]

text: sediment

text: Arctic Ocean

unit: m

unit: DD

text: Laptev Sea

text: mimarks-survey

text: marine sediment metagenome

characteristic: organism

text: ERC ABYSS

text: marine sediment metagenome

text: sediment

text: 454 GS FLX

text: true

characteristic: title


characteristic: ENA-CHECKLIST

text: Max Planck Institute for Marine Microbiology

text: public

text: 34578:cf4ac0f7-9dff-4bb9-923b-abe04d43a040

text: GFBIO

text: marine benthic biome [ENVO:01000024]

text: marine benthic feature [ENVO:01000105]

text: deep marine sediment [ENVO:00002113]

characteristic: environment (material)

text: sediment

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Laptev Sea

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: marine sediment metagenome

characteristic: pangaea event label

text: ERC ABYSS

characteristic: project name

characteristic: sample description

text: marine sediment metagenome

text: sediment

characteristic: sediment environmental package

text: 454 GS FLX

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

characteristic: total depth of water column


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 34577:cf4ac0f7-9dff-4bb9-923b-abe04d43a040

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

characteristic: description

text: marine benthic biome [ENVO:01000024]

characteristic: environment (biome)

text: marine benthic feature [ENVO:01000105]

characteristic: environment (feature)

text: deep marine sediment [ENVO:00002113]

text: sediment

text: Arctic Ocean

text: Laptev Sea

text: mimarks-survey

text: marine sediment metagenome

characteristic: organism

text: ERC ABYSS

text: marine sediment metagenome

text: sediment

text: 454 GS FLX

text: true

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: 34576:cf4ac0f7-9dff-4bb9-923b-abe04d43a040

text: GFBIO

text: marine benthic biome [ENVO:01000024]

text: marine benthic feature [ENVO:01000105]

text: deep marine sediment [ENVO:00002113]

characteristic: environment (material)

text: sediment

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Laptev Sea

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: marine sediment metagenome

characteristic: pangaea event label

text: ERC ABYSS

characteristic: project name

characteristic: sample description

text: marine sediment metagenome

text: sediment

characteristic: sediment environmental package

text: 454 GS FLX

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

characteristic: total depth of water column


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 34575:cf4ac0f7-9dff-4bb9-923b-abe04d43a040

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

characteristic: description

text: marine benthic biome [ENVO:01000024]

characteristic: environment (biome)

text: marine benthic feature [ENVO:01000105]

characteristic: environment (feature)

text: deep marine sediment [ENVO:00002113]

text: sediment

text: Arctic Ocean

text: Laptev Sea

text: mimarks-survey

text: marine sediment metagenome

characteristic: organism

text: ERC ABYSS

text: marine sediment metagenome

text: sediment

text: 454 GS FLX

text: true

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: 34574:cf4ac0f7-9dff-4bb9-923b-abe04d43a040

text: GFBIO

text: marine benthic biome [ENVO:01000024]

text: marine benthic feature [ENVO:01000105]

text: deep marine sediment [ENVO:00002113]

characteristic: environment (material)

text: sediment

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Laptev Sea

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: marine sediment metagenome

characteristic: pangaea event label

text: ERC ABYSS

characteristic: project name

characteristic: sample description

text: marine sediment metagenome

text: sediment

characteristic: sediment environmental package

text: 454 GS FLX

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

characteristic: total depth of water column


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 34573:cf4ac0f7-9dff-4bb9-923b-abe04d43a040

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

characteristic: description

text: marine benthic biome [ENVO:01000024]

characteristic: environment (biome)

text: marine benthic feature [ENVO:01000105]

characteristic: environment (feature)

text: deep marine sediment [ENVO:00002113]

text: sediment

text: Arctic Ocean

text: Laptev Sea

text: mimarks-survey

text: marine sediment metagenome

characteristic: organism

text: ERC ABYSS

text: marine sediment metagenome

text: sediment

text: 454 GS FLX

text: true

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: 34572:cf4ac0f7-9dff-4bb9-923b-abe04d43a040

text: GFBIO

text: marine benthic biome [ENVO:01000024]

text: marine benthic feature [ENVO:01000105]

text: deep marine sediment [ENVO:00002113]

characteristic: environment (material)

text: sediment

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Laptev Sea

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: marine sediment metagenome

characteristic: pangaea event label

text: ERC ABYSS

characteristic: project name

characteristic: sample description

text: marine sediment metagenome

text: sediment

characteristic: sediment environmental package

text: 454 GS FLX

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

characteristic: total depth of water column


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 34571:cf4ac0f7-9dff-4bb9-923b-abe04d43a040

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

characteristic: description

text: marine benthic biome [ENVO:01000024]

characteristic: environment (biome)

text: marine benthic feature [ENVO:01000105]

characteristic: environment (feature)

text: deep marine sediment [ENVO:00002113]

text: sediment

text: Arctic Ocean

text: Laptev Sea

text: mimarks-survey

text: marine sediment metagenome

characteristic: organism

text: ERC ABYSS

text: marine sediment metagenome

text: sediment

text: 454 GS FLX

text: true

characteristic: title


characteristic: ENA-CHECKLIST

text: STATENS SERUM INSTITUT

text: public

tag: Namespace:STATENS SERUM INSTITUT

text: New Zealand

text: Illumina MiSeq

characteristic: instrument model

text: Trichophyton erinacei

characteristic: read length

text: Trichophyton erinacei


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: STATENS SERUM INSTITUT

text: public

text: Denmark

text: Illumina MiSeq

text: Staphylococcus aureus

text: Staphylococcus aureus


text: STATENS SERUM INSTITUT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Denmark

text: NextSeq 500

text: Staphylococcus aureus

text: Staphylococcus aureus


text: STATENS SERUM INSTITUT

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: New Zealand

text: NextSeq 500

text: Staphylococcus aureus

text: Staphylococcus aureus


text: STATENS SERUM INSTITUT

text: public

text: United Kingdom

characteristic: description

text: NextSeq 500

text: Staphylococcus aureus

text: Staphylococcus aureus


text: STATENS SERUM INSTITUT

text: public

text: Portugal

text: NextSeq 500

text: Staphylococcus aureus

text: Staphylococcus aureus


text: STATENS SERUM INSTITUT

text: public

text: Spain

text: NextSeq 500

text: Staphylococcus aureus

text: Staphylococcus aureus


text: STATENS SERUM INSTITUT

text: public

text: Czech Republic

text: NextSeq 500

text: Staphylococcus aureus

text: Staphylococcus aureus


text: INSTITUT DE BIOLOGIA EVOLUTIVA

text: public

tag: Namespace:INSTITUT DE BIOLOGIA EVOLUTIVA

text: feces

text: western lowland gorilla

characteristic: common name

text: feces metagenomics

text: Gorilla gorilla gorilla

text: Gorilla gorilla gorilla

text: Microbiome Deep Sequencing


text: INSTITUT DE BIOLOGIA EVOLUTIVA

text: public

text: feces

text: western lowland gorilla

text: feces metagenomics

text: Gorilla gorilla gorilla

text: Gorilla gorilla gorilla

text: Microbiome 16S Amplification


text: INSTITUT DE BIOLOGIA EVOLUTIVA

text: public

text: feces

text: western lowland gorilla

text: feces host genomics

text: Gorilla gorilla gorilla

text: Gorilla gorilla gorilla

text: Target Capture


text: NORWEGIAN INSTITUTE OF PUBLIC HEALTH

text: public

tag: Namespace:NORWEGIAN INSTITUTE OF PUBLIC HEALTH

text: Clinical, Statens Serum Institut, Copenhagen, Denmark

text: Vibrio sp. 343

text: Vibrio sp. 343

text: Non-toxigenic Vibrio cholerae


text: NORWEGIAN INSTITUTE OF PUBLIC HEALTH

text: public

text: Vibrio sp. 343

text: Vibrio sp. 343

text: Vibrio vulnificus


text: NORWEGIAN INSTITUTE OF PUBLIC HEALTH

text: public

text: Clinical, Finnish Institute for Health and Welfare, Finland

text: Vibrio sp. 343

text: Vibrio sp. 343

text: Non-toxigenic Vibrio cholerae


text: NORWEGIAN INSTITUTE OF PUBLIC HEALTH

text: public

text: Environmental, Finnish Institute for Health and Welfare, Finland

text: Vibrio sp. 343

text: Vibrio sp. 343

text: Non-toxigenic Vibrio cholerae


text: NORWEGIAN INSTITUTE OF PUBLIC HEALTH

text: public

text: Vibrio sp. 343

text: Vibrio sp. 343

text: Vibrio vulnificus


text: NORWEGIAN INSTITUTE OF PUBLIC HEALTH

text: public

text: Clinical, Norwegian Institute of Public Health, Oslo, Norway

text: Vibrio sp. 343

text: Vibrio sp. 343

text: Vibrio alginolyticus


text: NORWEGIAN INSTITUTE OF PUBLIC HEALTH

text: public

text: Vibrio sp. 343

text: Vibrio sp. 343

text: Non-toxigenic Vibrio cholerae


text: NORWEGIAN INSTITUTE OF PUBLIC HEALTH

text: public

text: Vibrio sp. 343

text: Vibrio sp. 343

text: Vibrio parahaemolyticus


text: NORWEGIAN INSTITUTE OF PUBLIC HEALTH

text: public

text: Vibrio sp. 343

text: Vibrio sp. 343

text: Vibrio vulnificus


text: NORWEGIAN INSTITUTE OF PUBLIC HEALTH

text: public

text: Clinical, National Institute of Public Health, Warsaw, Poland

text: Vibrio sp. 343

text: Vibrio sp. 343

text: Non-toxigenic Vibrio cholerae


text: NORWEGIAN INSTITUTE OF PUBLIC HEALTH

text: public

text: Clinical, Public Health Agency of Sweden, Solna, Sweden

text: Vibrio sp. 343

text: Vibrio sp. 343

text: Vibrio alginolyticus


text: NORWEGIAN INSTITUTE OF PUBLIC HEALTH

text: public

text: Vibrio sp. 343

text: Vibrio sp. 343

text: Non-toxigenic Vibrio cholerae


text: NORWEGIAN INSTITUTE OF PUBLIC HEALTH

text: public

text: Vibrio sp. 343

text: Vibrio sp. 343

text: Vibrio fluvialis


text: NORWEGIAN INSTITUTE OF PUBLIC HEALTH

text: public

text: Vibrio sp. 343

text: Vibrio sp. 343

text: Vibrio mimicus


text: NORWEGIAN INSTITUTE OF PUBLIC HEALTH

text: public

text: Vibrio sp. 343

text: Vibrio sp. 343

text: Vibrio parahaemolyticus


text: NORWEGIAN INSTITUTE OF PUBLIC HEALTH

text: public

text: Vibrio sp. 343

text: Vibrio sp. 343

text: Vibrio vulnificus


text: Animal and Plant Health Agency

text: public

tag: Namespace:Animal and Plant Health Agency

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

characteristic: host health state

text: porcine

characteristic: host scientific name

characteristic: isolate

text: pig faeces

characteristic: isolation source

text: Escherichia coli

text: Escherichia coli

characteristic: strain

text: Detection of the mobile tigecycline resistance gene tet(X4) in Escherichia coli from pigs in the United Kingdom


E-MTAB-10203:Sample 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: VICTOR CHANG CARDIAC RESEARCH INSTITUTE

text: public

text: E-MTAB-10203:Sample 1

tag: Namespace:VICTOR CHANG CARDIAC RESEARCH INSTITUTE

text: ArrayExpress

characteristic: broker name

text: Protocols: Adult Amphimedon queenslandica were collected from Shark Bay, Heron Island, Great Barrier Reef, Queensland Australia (23°26′37.92″ S, 151°55′8.81″ E) under Marine Parks permit number G16/38120.1 Sponges were transferred to a closed aquaria system at the University of Queensland, Brisbane, Australia and maintained as previously described [PMID: 21356734]. Adult brood chambers were dissected and embryos were staged according to [PMID: 17925879]. Larvae naturally released from sponges were collected prior to dissecting brood changes [PMID:21356741]. Cell suspensions from adult sponges were generated by cutting away externally facing tissue, avoiding any potential contaminating tissues and washing three times in 0.2uM filtered Ca+ and Mg+ free artificial seawater (FSW) to try to reduce any potential epiphytes; however, we acknowledge that this tissue may contain allogeneic microorganisms. Cleaned adult tissue was passed through 60um nylon mesh to generate a single cell suspension [PMID: 29942020].Dissected individual embryos were placed in FSW and loaded into a P1000 pipette tip which had been cut and fitted with sealed 60um mesh at the end. This allowed a small volume of FSW to be used to push the embryo through the mesh using a hand-held pipette and the resulting cell suspension to be collected into a 1.7mL centrifuge tube. To collect any tissue stuck on the mesh, the filter tip was then placed in 1 x Trypisn (Sigma)/FSW solution and placed at 37oC for 10mins. This was washed twice with FSW and added to the initial cell suspension. The filter was visually examined under a dissecting microscope to ensure no tissue remained.We first performed the above with larvae and counted the resulting cell suspensions using trypan blue exclusion staining and manual counting with a hemocytometer. From this we estimated a single larvae to have approximately 35,000 cells. Cell suspensions from adult tissues were also counted using trypan blue staining, and an equivalent amount of cells were used to make adult libraries. Cell suspensions of approximately 35,000 cells from individual embryos and adult samples were spin at 500xg for 5mins. ATAC-Seq libraries were made according to [PMID: 25559105, PMID: 24097267]. Libraries using unique primers were amplified for <7 additional cycles. The quality of each individual Library was assessed using a Bioanalyzer High‐Sensitivity DNA Analysis kit (Agilent). Equal volumes of libraries from three individual replicates for each stage were then pooled and run again on the Bioanalyser. Because libraries appeared to have a large concentration of free primer, we incorporated an additional purification step by adding a 1.8x concentration of AMPure Beads (Beckman Coulter), washed twice with 70% ethanol and eluted in 40uL water. A 30nM pooled library was prepared for sequencing.

text: larvae

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

characteristic: individual

text: Amphimedon queenslandica

characteristic: organism

text: Amphimedon queenslandica

text: whole organism

characteristic: organism part

text: Amphimedon queenslandica

text: hermaphrodite

characteristic: sex

text: wild type

text: Sample 1

characteristic: title


E-MTAB-10203:Sample 10

characteristic: External Id

text: VICTOR CHANG CARDIAC RESEARCH INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10203:Sample 10

characteristic: Submitter Id

text: ArrayExpress

characteristic: description

text: spot

text: wild type genotype

text: Amphimedon queenslandica

text: Amphimedon queenslandica

text: whole organism

text: Amphimedon queenslandica

text: hermaphrodite

text: wild type

text: Sample 10


E-MTAB-10203:Sample 11

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: VICTOR CHANG CARDIAC RESEARCH INSTITUTE

text: public

text: E-MTAB-10203:Sample 11

text: ArrayExpress

text: spot

text: wild type genotype

text: Amphimedon queenslandica

text: Amphimedon queenslandica

text: whole organism

text: Amphimedon queenslandica

text: hermaphrodite

text: wild type

characteristic: strain

text: Sample 11


E-MTAB-10203:Sample 12

text: VICTOR CHANG CARDIAC RESEARCH INSTITUTE

text: public

text: E-MTAB-10203:Sample 12

text: ArrayExpress

characteristic: broker name

text: spot

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

characteristic: individual

text: Amphimedon queenslandica

text: Amphimedon queenslandica

text: whole organism

text: Amphimedon queenslandica

text: hermaphrodite

text: wild type

text: Sample 12


E-MTAB-10203:Sample 13

text: VICTOR CHANG CARDIAC RESEARCH INSTITUTE

text: public

text: E-MTAB-10203:Sample 13

text: ArrayExpress

text: ring

text: wild type genotype

text: Amphimedon queenslandica

characteristic: organism

text: Amphimedon queenslandica

text: whole organism

characteristic: organism part

text: Amphimedon queenslandica

text: hermaphrodite

characteristic: sex

text: wild type

text: Sample 13

characteristic: title


E-MTAB-10203:Sample 14

characteristic: External Id

text: VICTOR CHANG CARDIAC RESEARCH INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10203:Sample 14

text: ArrayExpress

text: ring

text: wild type genotype

text: Amphimedon queenslandica

text: Amphimedon queenslandica

text: whole organism

text: Amphimedon queenslandica

text: hermaphrodite

text: wild type

text: Sample 14


E-MTAB-10203:Sample 15

text: VICTOR CHANG CARDIAC RESEARCH INSTITUTE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10203:Sample 15

characteristic: Submitter Id

text: ArrayExpress

characteristic: description

text: ring

text: wild type genotype

text: Amphimedon queenslandica

text: Amphimedon queenslandica

text: whole organism

text: Amphimedon queenslandica

text: hermaphrodite

text: wild type

text: Sample 15


E-MTAB-10203:Sample 16

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: VICTOR CHANG CARDIAC RESEARCH INSTITUTE

text: public

text: E-MTAB-10203:Sample 16

text: ArrayExpress

text: late ring

text: wild type genotype

text: Amphimedon queenslandica

text: Amphimedon queenslandica

text: whole organism

text: Amphimedon queenslandica

text: hermaphrodite

text: wild type

characteristic: strain

text: Sample 16


E-MTAB-10203:Sample 17

text: VICTOR CHANG CARDIAC RESEARCH INSTITUTE

text: public

text: E-MTAB-10203:Sample 17

text: ArrayExpress

characteristic: broker name

text: late ring

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

characteristic: individual

text: Amphimedon queenslandica

text: Amphimedon queenslandica

text: whole organism

text: Amphimedon queenslandica

text: hermaphrodite

text: wild type

text: Sample 17


E-MTAB-10203:Sample 18

text: VICTOR CHANG CARDIAC RESEARCH INSTITUTE

text: public

text: E-MTAB-10203:Sample 18

text: ArrayExpress

text: adult

text: wild type genotype

text: Amphimedon queenslandica

characteristic: organism

text: Amphimedon queenslandica

text: whole organism

characteristic: organism part

text: Amphimedon queenslandica

text: hermaphrodite

characteristic: sex

text: wild type

text: Sample 18

characteristic: title


E-MTAB-10203:Sample 19

characteristic: External Id

text: VICTOR CHANG CARDIAC RESEARCH INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10203:Sample 19

text: ArrayExpress

text: adult

text: wild type genotype

text: Amphimedon queenslandica

text: Amphimedon queenslandica

text: whole organism

text: Amphimedon queenslandica

text: hermaphrodite

text: wild type

text: Sample 19


E-MTAB-10203:Sample 2

text: VICTOR CHANG CARDIAC RESEARCH INSTITUTE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10203:Sample 2

characteristic: Submitter Id

text: ArrayExpress

characteristic: description

text: larvae

text: wild type genotype

text: Amphimedon queenslandica

text: Amphimedon queenslandica

text: whole organism

text: Amphimedon queenslandica

text: hermaphrodite

text: wild type

text: Sample 2


E-MTAB-10203:Sample 20

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: VICTOR CHANG CARDIAC RESEARCH INSTITUTE

text: public

text: E-MTAB-10203:Sample 20

text: ArrayExpress

text: adult

text: wild type genotype

text: Amphimedon queenslandica

text: Amphimedon queenslandica

text: whole organism

text: Amphimedon queenslandica

text: hermaphrodite

text: wild type

characteristic: strain

text: Sample 20


E-MTAB-10203:Sample 21

text: VICTOR CHANG CARDIAC RESEARCH INSTITUTE

text: public

text: E-MTAB-10203:Sample 21

text: ArrayExpress

characteristic: broker name

text: cloud

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

characteristic: individual

text: Amphimedon queenslandica

text: Amphimedon queenslandica

text: whole organism

text: Amphimedon queenslandica

text: hermaphrodite

text: wild type

text: Sample 21


E-MTAB-10203:Sample 22

text: VICTOR CHANG CARDIAC RESEARCH INSTITUTE

text: public

text: E-MTAB-10203:Sample 22

text: ArrayExpress

text: cloud

text: wild type genotype

text: Amphimedon queenslandica

characteristic: organism

text: Amphimedon queenslandica

text: whole organism

characteristic: organism part

text: Amphimedon queenslandica

text: hermaphrodite

characteristic: sex

text: wild type

text: Sample 22

characteristic: title


E-MTAB-10203:Sample 23

characteristic: External Id

text: VICTOR CHANG CARDIAC RESEARCH INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10203:Sample 23

text: ArrayExpress

text: cloud

text: wild type genotype

text: Amphimedon queenslandica

text: Amphimedon queenslandica

text: whole organism

text: Amphimedon queenslandica

text: hermaphrodite

text: wild type

text: Sample 23


E-MTAB-10203:Sample 3

text: VICTOR CHANG CARDIAC RESEARCH INSTITUTE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10203:Sample 3

characteristic: Submitter Id

text: ArrayExpress

characteristic: description

text: larvae

text: wild type genotype

text: Amphimedon queenslandica

text: Amphimedon queenslandica

text: whole organism

text: Amphimedon queenslandica

text: hermaphrodite

text: wild type

text: Sample 3


E-MTAB-10203:Sample 4

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: VICTOR CHANG CARDIAC RESEARCH INSTITUTE

text: public

text: E-MTAB-10203:Sample 4

text: ArrayExpress

text: white

text: wild type genotype

text: Amphimedon queenslandica

text: Amphimedon queenslandica

text: whole organism

text: Amphimedon queenslandica

text: hermaphrodite

text: wild type

characteristic: strain

text: Sample 4


E-MTAB-10203:Sample 5

text: VICTOR CHANG CARDIAC RESEARCH INSTITUTE

text: public

text: E-MTAB-10203:Sample 5

text: ArrayExpress

characteristic: broker name

text: white

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

characteristic: individual

text: Amphimedon queenslandica

text: Amphimedon queenslandica

text: whole organism

text: Amphimedon queenslandica

text: hermaphrodite

text: wild type

text: Sample 5


E-MTAB-10203:Sample 6

text: VICTOR CHANG CARDIAC RESEARCH INSTITUTE

text: public

text: E-MTAB-10203:Sample 6

text: ArrayExpress

text: white

text: wild type genotype

text: Amphimedon queenslandica

characteristic: organism

text: Amphimedon queenslandica

text: whole organism

characteristic: organism part

text: Amphimedon queenslandica

text: hermaphrodite

characteristic: sex

text: wild type

text: Sample 6

characteristic: title


E-MTAB-10203:Sample 7

characteristic: External Id

text: VICTOR CHANG CARDIAC RESEARCH INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10203:Sample 7

text: ArrayExpress

text: brown

text: wild type genotype

text: Amphimedon queenslandica

text: Amphimedon queenslandica

text: whole organism

text: Amphimedon queenslandica

text: hermaphrodite

text: wild type

text: Sample 7


E-MTAB-10203:Sample 8

text: VICTOR CHANG CARDIAC RESEARCH INSTITUTE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10203:Sample 8

characteristic: Submitter Id

text: ArrayExpress

characteristic: description

text: brown

text: wild type genotype

text: Amphimedon queenslandica

text: Amphimedon queenslandica

text: whole organism

text: Amphimedon queenslandica

text: hermaphrodite

text: wild type

text: Sample 8


E-MTAB-10203:Sample 9

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: VICTOR CHANG CARDIAC RESEARCH INSTITUTE

text: public

text: E-MTAB-10203:Sample 9

text: ArrayExpress

text: brown

text: wild type genotype

text: Amphimedon queenslandica

text: Amphimedon queenslandica

text: whole organism

text: Amphimedon queenslandica

text: hermaphrodite

text: wild type

characteristic: strain

text: Sample 9


text: IMPERIAL COLLEGE LONDON

text: public

tag: Namespace:IMPERIAL COLLEGE LONDON

characteristic: collection date

text: human

characteristic: common name

text: Human

characteristic: environment (biome)

text: Vaginal fornix

characteristic: environment (feature)

text: Mucosa

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-vaginal

characteristic: human vaginal environmental package

text: eukaryote

characteristic: investigation type

text: Homo sapiens

text: Secretor status in a pregnancy cohort

characteristic: project name

text: Homo sapiens

text: PacBio RS II

characteristic: sequencing method

characteristic: target gene

text: Secretor status in a pregnancy cohort


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UNIVERSITY OF MALAYA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF MALAYA

characteristic: Submitter Id

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Targeted sequencing of Malaysian cardiomyopathy patients

characteristic: title


E-MTAB-10231:Sheep 1

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: BAH-GU

text: public

text: E-MTAB-10231:Sheep 1

unit: month

characteristic: age

text: ArrayExpress

characteristic: broker name

text: surface mucosal cell of stomach

characteristic: cell type

text: sheep

characteristic: common name

text: Protocols: two sheep were infected with 50,000 Teladorsagia circumcincta infective L3 larvae. Abomasal epithelial cells were isolated separately from the two sheep using 10x Genomics single cell protocol. Tissue sections were incubated in HBSS containing 2.5 mM EDTA, 1mM DTT and 10 g/ml DNase I, followed by HBSS containing 1U/ml Dispase II and 10 g/ml DNase I. Isolated cells were strained through a 70um Nylon mesh sterile strainer. Cell count and viability were assessed using trypan blue staining. 10x Genomics Chromium Single Cell 3’ Reagent Kit (v3). Samples were subject to barcoded reverse transcription, cDNA was amplified (12 cycles) and libraries generated using 10x Genomics Chromium Single Cell 3’ Reagent Kit (v3).

characteristic: description

text: adult

characteristic: developmental stage

text: Sheep 1

characteristic: individual

text: Teladorsagia circumcincta

characteristic: infect

text: Ovis aries

text: Ovis aries

text: abomasum

characteristic: organism part

text: Ovis aries

text: male

characteristic: sex

text: Texel cross

characteristic: strain

text: Sheep 1


E-MTAB-10231:Sheep 2

characteristic: ENA-CHECKLIST

characteristic: External Id

text: BAH-GU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10231:Sheep 2

text: ArrayExpress

text: surface mucosal cell of stomach

text: sheep

text: adult

text: Sheep 2

text: Teladorsagia circumcincta

text: Ovis aries

text: Ovis aries

text: abomasum

text: Ovis aries

text: male

text: Texel cross

text: Sheep 2


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GUH

text: public

characteristic: Submitter Id

characteristic: collection date

text: terrestrial

characteristic: environment (biome)

text: organic

characteristic: environment (feature)

text: microbial

characteristic: environment (material)

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: MiSeq

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:BOEHRINGER INGELHEIM PHARMA GMBH & CO KG

text: pig

characteristic: common name

text: Sus scrofa

text: Sus scrofa

text: Retina from Domestic Pig


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: BOEHRINGER INGELHEIM PHARMA GMBH & CO KG

text: public

characteristic: Submitter Id

text: pig

text: Sus scrofa

text: Sus scrofa

text: Retina from Domestic Pig


text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Retina from Mini Pig


text: public

tag: Namespace:Department of Medical Biochemistry and Microbiology, Science for Life Laboratory,Uppsala University

unit: year

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Ishikawa

characteristic: cell line

text: human

text: Protocols: Ishikawa cells were cultured in 6-well plates and starved in serum-free DMEM overnight. Then cells were treated with and without 20 ng/ml BMP2 in DMEM containing 1% FBS for 2 h or 48 h. Total RNAs were extracted using the Total RNA Purification Kit (Norgen Biotek, Thoroid, Canada) according to the manufacturer’s instruction. Sequencing libraries for 9 samples were prepared from 1 μg total RNA using the TruSeq stranded total RNA library preparation kit with RiboZero Gold treatment (Illumina; San Diego, CA, USA) following the manufacturer’s instruction.

characteristic: description

text: adult

characteristic: developmental stage

text: endometrium adenocarcinoma

characteristic: disease

text: Asian

characteristic: ethnic group

text: wild type genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: endometrium

characteristic: organism part

characteristic: replicate

text: Homo sapiens

text: female

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Department of Medical Biochemistry and Microbiology, Science for Life Laboratory,Uppsala University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: Ishikawa

text: human

text: adult

text: endometrium adenocarcinoma

text: Asian

text: wild type genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: endometrium

text: Homo sapiens

text: female

characteristic: title


LMG 31506

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: LM-UGent

text: public

characteristic: SRA accession

text: LMG 31506

characteristic: Submitter Id

text: South Korea

characteristic: geographic location (country and/or sea)

text: JCM 19890

characteristic: isolate

text: Soil

characteristic: isolation source

text: Cupriavidus yeoncheonensis

text: Cupriavidus yeoncheonensis

text: LMG 31506

characteristic: strain

text: Cupriavidus yeoncheonensis LMG 31506


text: public

tag: Namespace:Institute of Neurosciences - University of Barcelona

text: human

characteristic: common name

text: Blood whole exome sequencing from Parkinson patient DV1

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: DV1 blood WES


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Institute of Neurosciences - University of Barcelona

text: public

text: human

text: Cerebellum whole exome sequencing from Parkinson patient DV1

text: Homo sapiens

text: Homo sapiens

text: DV1 cerebellum WES


characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: human

text: Striatum whole exome sequencing from Parkinson patient DV1

text: Homo sapiens

text: Homo sapiens

text: DV1 striatum WES


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: human

text: Neocortex whole exome sequencing from Parkinson patient DV1

text: Homo sapiens

text: Homo sapiens

text: DV1 neocortex WES


text: public

text: human

text: Sustantia nigra whole exome sequencing from Parkinson patient DV1

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: DV1 sustantia nigra WES

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: human

text: Blood whole exome sequencing from Parkinson patient DV2

text: Homo sapiens

text: Homo sapiens

text: DV2 blood WES


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: human

text: Cerebellum whole exome sequencing from Parkinson patient DV2

text: Homo sapiens

text: Homo sapiens

text: DV2 cerebellum WES


text: public

text: human

text: Striatum whole exome sequencing from Parkinson patient DV2

text: Homo sapiens

text: Homo sapiens

text: DV2 striatum WES


text: public

text: human

text: Neocortex whole exome sequencing from Parkinson patient DV2

text: Homo sapiens

text: Homo sapiens

text: DV2 neocortex WES


text: public

text: human

text: Sustantia nigra whole exome sequencing from Parkinson patient DV2

text: Homo sapiens

text: Homo sapiens

text: DV2 sustantia nigra WES


text: public

text: human

text: Blood whole exome sequencing from Parkinson patient DV3

text: Homo sapiens

text: Homo sapiens

text: DV3 blood WES


text: public

text: human

text: Cerebellum whole exome sequencing from Parkinson patient DV3

text: Homo sapiens

text: Homo sapiens

text: DV3 cerebellum WES


text: public

text: human

text: Striatum whole exome sequencing from Parkinson patient DV3

text: Homo sapiens

text: Homo sapiens

text: DV3 striatum WES


text: public

text: human

text: Neocortex whole exome sequencing from Parkinson patient DV3

text: Homo sapiens

text: Homo sapiens

text: DV3 neocortex WES


text: public

text: human

text: Sustantia nigra whole exome sequencing from Parkinson patient DV3

text: Homo sapiens

text: Homo sapiens

text: DV3 sustantia nigra WES


text: public

text: human

text: Blood whole exome sequencing from Parkinson patient DV4

text: Homo sapiens

text: Homo sapiens

text: DV4 blood WES


text: public

text: human

text: Cerebellum whole exome sequencing from Parkinson patient DV4

text: Homo sapiens

text: Homo sapiens

text: DV4 cerebellum WES


text: Institute of Neurosciences - University of Barcelona

text: public

text: human

text: Striatum whole exome sequencing from Parkinson patient DV4

text: Homo sapiens

text: Homo sapiens

text: DV4 striatum WES


text: public

text: human

text: Neocortex whole exome sequencing from Parkinson patient DV4

text: Homo sapiens

text: Homo sapiens

text: DV4 neocortex WES


text: public

text: human

text: Sustantia nigra whole exome sequencing from Parkinson patient DV4

text: Homo sapiens

text: Homo sapiens

text: DV4 sustantia nigra WES


text: public

text: human

text: Blood whole exome sequencing from Parkinson patient DV5

text: Homo sapiens

text: Homo sapiens

text: DV5 blood WES


text: public

text: human

text: Cerebellum whole exome sequencing from Parkinson patient DV5

text: Homo sapiens

text: Homo sapiens

text: DV5 cerebellum WES


text: public

text: human

text: Striatum whole exome sequencing from Parkinson patient DV5

text: Homo sapiens

text: Homo sapiens

text: DV5 striatum WES


text: public

text: human

text: Neocortex whole exome sequencing from Parkinson patient DV5

text: Homo sapiens

text: Homo sapiens

text: DV5 neocortex WES


text: public

text: human

text: Sustantia nigra whole exome sequencing from Parkinson patient DV5

text: Homo sapiens

text: Homo sapiens

text: DV5 sustantia nigra WES


text: public

text: human

text: Blood whole exome sequencing from Parkinson patient DV6

text: Homo sapiens

text: Homo sapiens

text: DV6 blood WES


text: public

text: human

text: Cerebellum whole exome sequencing from Parkinson patient DV6

text: Homo sapiens

text: Homo sapiens

text: DV6 cerebellum WES


text: public

text: human

text: Striatum whole exome sequencing from Parkinson patient DV6

text: Homo sapiens

text: Homo sapiens

text: DV6 striatum WES


text: public

text: human

text: Neocortex whole exome sequencing from Parkinson patient DV6

text: Homo sapiens

text: Homo sapiens

text: DV6 neocortex WES


text: public

text: human

text: Sustantia nigra whole exome sequencing from Parkinson patient DV6

text: Homo sapiens

text: Homo sapiens

text: DV6 sustantia nigra WES


text: public

text: human

text: Blood whole exome sequencing from Parkinson patient DV7

text: Homo sapiens

text: Homo sapiens

text: DV7 blood WES


text: public

text: human

text: Cerebellum whole exome sequencing from Parkinson patient DV7

text: Homo sapiens

text: Homo sapiens

text: DV7 cerebellum WES


text: public

text: human

text: Striatum whole exome sequencing from Parkinson patient DV7

text: Homo sapiens

text: Homo sapiens

text: DV7 striatum WES


text: Institute of Neurosciences - University of Barcelona

text: public

text: human

text: Neocortex whole exome sequencing from Parkinson patient DV7

text: Homo sapiens

text: Homo sapiens

text: DV7 neocortex WES


text: public

text: human

text: Sustantia nigra whole exome sequencing from Parkinson patient DV7

text: Homo sapiens

text: Homo sapiens

text: DV7 sustantia nigra WES


text: public

text: human

text: Blood whole exome sequencing from Parkinson patient DV8

text: Homo sapiens

text: Homo sapiens

text: DV8 blood WES


text: public

text: human

text: Cerebellum whole exome sequencing from Parkinson patient DV8

text: Homo sapiens

text: Homo sapiens

text: DV8 cerebellum WES


text: public

text: human

text: Striatum whole exome sequencing from Parkinson patient DV8

text: Homo sapiens

text: Homo sapiens

text: DV8 striatum WES


text: public

text: human

text: Neocortex whole exome sequencing from Parkinson patient DV8

text: Homo sapiens

text: Homo sapiens

text: DV8 neocortex WES


text: public

text: human

text: Sustantia nigra whole exome sequencing from Parkinson patient DV8

text: Homo sapiens

text: Homo sapiens

text: DV8 sustantia nigra WES


text: public

text: human

text: Blood whole exome sequencing from Parkinson patient DV9

text: Homo sapiens

text: Homo sapiens

text: DV9 blood WES


text: public

text: human

text: Cerebellum whole exome sequencing from Parkinson patient DV9

text: Homo sapiens

text: Homo sapiens

text: DV9 cerebellum WES


text: public

text: human

text: Striatum whole exome sequencing from Parkinson patient DV9

text: Homo sapiens

text: Homo sapiens

text: DV9 striatum WES


text: public

text: human

text: Neocortex whole exome sequencing from Parkinson patient DV9

text: Homo sapiens

text: Homo sapiens

text: DV9 neocortex WES


text: public

text: human

text: Sustantia nigra whole exome sequencing from Parkinson patient DV9

text: Homo sapiens

text: Homo sapiens

text: DV9 sustantia nigra WES


text: public

text: human

text: Blood whole exome sequencing from Parkinson patient DV10

text: Homo sapiens

text: Homo sapiens

text: DV10 blood WES


text: public

text: human

text: Cerebellum whole exome sequencing from Parkinson patient DV10

text: Homo sapiens

text: Homo sapiens

text: DV10 cerebellum WES


text: public

text: human

text: Striatum whole exome sequencing from Parkinson patient DV10

text: Homo sapiens

text: Homo sapiens

text: DV10 striatum WES


text: public

text: human

text: Neocortex whole exome sequencing from Parkinson patient DV10

text: Homo sapiens

text: Homo sapiens

text: DV10 neocortex WES


text: Institute of Neurosciences - University of Barcelona

text: public

text: human

text: Sustantia nigra whole exome sequencing from Parkinson patient DV10

text: Homo sapiens

text: Homo sapiens

text: DV10 sustantia nigra WES


text: DUNDEE

text: public

characteristic: collection date

text: Individual bacterium isolated from barely rhizosphere

text: Agricultural biome

characteristic: environment (biome)

text: Rhizosphere

characteristic: environment (feature)

text: Soil

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: investigation type

text: Microbacterium sp. Bi128

text: plant-associated

characteristic: plant-associated environmental package

text: Barley SynCom

characteristic: project name

text: Microbacterium sp. Bi128

text: Illumina PE reads

characteristic: sequencing method

text: barley SynCom isolate Bi128


characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:CIRB, College de France, PSL research university, Inserm U1050, Cnrs UMR 7241

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: house mouse

characteristic: common name

text: Protocols: Total RNA was extracted from mouse embryonic stem cells RNeasy Plus Mini Kit, Qiagen, with additional in-column DNase treatment TruSeq Stranded Total RNA Library Prep Gold with ribo Zeo (Illumina, ref: 20020598)

characteristic: description

text: embryo stage

characteristic: developmental stage

text: normal

characteristic: disease

text: PML CRISPR cas9 knock out

characteristic: genetic modification

text: PML -/-

characteristic: genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: embryonic structure

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CIRB, College de France, PSL research university, Inserm U1050, Cnrs UMR 7241

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

text: embryo stage

text: normal

text: PML CRISPR cas9 knock out

text: PML -/-

text: Mus musculus

text: Mus musculus

text: embryonic structure

text: Mus musculus

text: male

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: house mouse

characteristic: common name

text: embryo stage

text: normal

text: PML +/+

text: Mus musculus

text: Mus musculus

text: embryonic structure

text: Mus musculus

text: male


text: Sciensano

text: public

text: Crystalmash (The Alchemist's Pantry) - batch1

characteristic: bio material

text: Sciensano

characteristic: collected by

text: Viable, genetically manipulated Bacillus velezensis strain isolated from food enzyme product, harboring recombinant pUB110- derived plasmid with insert carrying protease gene of B. velezensis. Associated RASFF: RASFF2019.3332

characteristic: description

characteristic: isolate

text: Bacillus velezensis

characteristic: organism

text: Bacillus velezensis

text: B. velezensis GMM isolated from food enzyme product


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Sciensano

text: public

text: Enzyme 4g (Pilsner) - batch1

text: Sciensano

text: Viable, genetically manipulated Bacillus velezensis strain isolated from food enzyme product, harboring recombinant pUB110- derived plasmid with insert carrying protease gene of B. velezensis. Associated RASFF: RASFF2020.2582

text: Bacillus velezensis

text: Bacillus velezensis


characteristic: External Id

text: Sciensano

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Enzyme 4g (Pilsner) - batch2

text: Sciensano

text: Bacillus velezensis

text: Bacillus velezensis


text: Sciensano

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Pureferm (The Alchemist's Pantry) - batch1

text: Sciensano

text: Bacillus velezensis

text: Bacillus velezensis

characteristic: title


text: Sciensano

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Alpha-amylase enzym 4g (Cobra) - batch1

text: Sciensano

text: Viable, genetically manipulated Bacillus velezensis strain isolated from food enzyme product, harboring recombinant pUB110- derived plasmid with insert carrying protease gene of B. velezensis. Associated RASFF: RASFF2020.2577

text: Bacillus velezensis

text: Bacillus velezensis


text: Geological Survey of Finland

text: public

tag: Namespace:Geological Survey of Finland

characteristic: collection date

text: Groundwater sample from observation well HP101, sample b

text: Continental subsurface

characteristic: environment (biome)

text: esker

characteristic: environment (feature)

text: groundwater

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: investigation type

text: unidentified archaeon

text: HankoSGD

characteristic: project name

text: submersible pump

characteristic: sample collection device or method

text: unidentified archaeon

text: Illumina MiSeq

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geological Survey of Finland

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Seawater above pockmark B, sample a

characteristic: description

text: Sea

text: brackish coastal sea

text: seawater

text: Finland

text: unidentified archaeon

characteristic: organism

text: HankoSGD

text: Limnos water sampler

text: unidentified archaeon

text: Illumina MiSeq

text: water


text: Geological Survey of Finland

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: Seawater above pockmark B, sample b

text: Sea

characteristic: environment (biome)

text: brackish coastal sea

characteristic: environment (feature)

text: seawater

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: unidentified archaeon

text: HankoSGD

text: Limnos water sampler

text: unidentified archaeon

text: Illumina MiSeq

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geological Survey of Finland

text: public

text: Seawater above pockmark D, sample a

text: Sea

text: brackish coastal sea

text: seawater

text: Finland

characteristic: geographic location (longitude)

characteristic: investigation type

text: unidentified archaeon

text: HankoSGD

characteristic: project name

text: Limnos water sampler

characteristic: sample collection device or method

text: unidentified archaeon

text: Illumina MiSeq

characteristic: sequencing method

text: water

characteristic: water environmental package


text: Geological Survey of Finland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Seawater above pockmark D, sample b

characteristic: description

text: Sea

characteristic: environment (biome)

text: brackish coastal sea

text: seawater

text: Finland

text: unidentified archaeon

characteristic: organism

text: HankoSGD

text: Limnos water sampler

text: unidentified archaeon

text: Illumina MiSeq

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geological Survey of Finland

text: public

text: Seawater above pockmark E, sample a

text: Sea

text: brackish coastal sea

characteristic: environment (feature)

text: seawater

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: unidentified archaeon

text: HankoSGD

text: Limnos water sampler

text: unidentified archaeon

text: Illumina MiSeq

characteristic: title

text: water


text: Geological Survey of Finland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Seawater above pockmark E, sample b

text: Sea

text: brackish coastal sea

text: seawater

text: Finland

characteristic: geographic location (longitude)

characteristic: investigation type

text: unidentified archaeon

text: HankoSGD

characteristic: project name

text: Limnos water sampler

characteristic: sample collection device or method

text: unidentified archaeon

text: Illumina MiSeq

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geological Survey of Finland

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Seawater control sample from offshore station J, sample a

characteristic: description

text: Sea

characteristic: environment (biome)

text: brackish coastal sea

text: seawater

text: Finland

text: unidentified archaeon

characteristic: organism

text: HankoSGD

text: Limnos water sampler

text: unidentified archaeon

text: Illumina MiSeq

text: water


text: Geological Survey of Finland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Pockmark B sediment, 1.5-2.5 cm depth, sample a

text: Sea sediment

text: brackish coastal sea sediment

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: unidentified archaeon

text: HankoSGD

text: box corer

text: unidentified archaeon

text: Illumina MiSeq

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geological Survey of Finland

text: public

text: Pockmark B sediment, 3.5-4.5 cm depth, sample a

text: Sea sediment

text: brackish coastal sea sediment

text: sediment

text: Finland

characteristic: geographic location (longitude)

characteristic: investigation type

text: unidentified archaeon

text: HankoSGD

characteristic: project name

text: box corer

characteristic: sample collection device or method

text: unidentified archaeon

text: Illumina MiSeq

characteristic: sequencing method

text: water

characteristic: water environmental package


text: Geological Survey of Finland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Pockmark B sediment, 1.5-2.5 cm depth, sample b

characteristic: description

text: Sea sediment

characteristic: environment (biome)

text: brackish coastal sea sediment

text: sediment

text: Finland

text: unidentified archaeon

characteristic: organism

text: HankoSGD

text: box corer

text: unidentified archaeon

text: Illumina MiSeq

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geological Survey of Finland

text: public

text: Pockmark B sediment, 3.5-4.5 cm depth, sample b

text: Sea sediment

text: brackish coastal sea sediment

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: unidentified archaeon

text: HankoSGD

text: box corer

text: unidentified archaeon

text: Illumina MiSeq

characteristic: title

text: water


text: Geological Survey of Finland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Pockmark D sediment, 1.5-2.5 cm depth, sample a

text: Sea sediment

text: brackish coastal sea sediment

text: sediment

text: Finland

characteristic: geographic location (longitude)

characteristic: investigation type

text: unidentified archaeon

text: HankoSGD

characteristic: project name

text: box corer

characteristic: sample collection device or method

text: unidentified archaeon

text: Illumina MiSeq

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geological Survey of Finland

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Pockmark D sediment, 3.5-4.5 cm depth, sample a

characteristic: description

text: Sea sediment

characteristic: environment (biome)

text: brackish coastal sea sediment

text: sediment

text: Finland

text: unidentified archaeon

characteristic: organism

text: HankoSGD

text: box corer

text: unidentified archaeon

text: Illumina MiSeq

text: water


text: Geological Survey of Finland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Pockmark D sediment, 1.5-2.5 cm depth, sample b

text: Sea sediment

text: brackish coastal sea sediment

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: unidentified archaeon

text: HankoSGD

text: box corer

text: unidentified archaeon

text: Illumina MiSeq

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geological Survey of Finland

text: public

text: Pockmark D sediment, 3.5-4.5 cm depth, sample b

text: Sea sediment

text: brackish coastal sea sediment

text: sediment

text: Finland

characteristic: geographic location (longitude)

characteristic: investigation type

text: unidentified archaeon

text: HankoSGD

characteristic: project name

text: box corer

characteristic: sample collection device or method

text: unidentified archaeon

text: Illumina MiSeq

characteristic: sequencing method

text: water

characteristic: water environmental package


text: Geological Survey of Finland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Pockmark E sediment, 1.5-2.5 cm depth, sample a

characteristic: description

text: Sea sediment

characteristic: environment (biome)

text: brackish coastal sea sediment

text: sediment

text: Finland

text: unidentified archaeon

characteristic: organism

text: HankoSGD

text: Gemax twin-barrel short gravity corer

text: unidentified archaeon

text: Illumina MiSeq

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geological Survey of Finland

text: public

text: Pockmark E sediment, 3.5-4.5 cm depth, sample a

text: Sea sediment

text: brackish coastal sea sediment

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: unidentified archaeon

text: HankoSGD

text: Gemax twin-barrel short gravity corer

text: unidentified archaeon

text: Illumina MiSeq

characteristic: title

text: water


text: Geological Survey of Finland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Pockmark E sediment, 1.5-2.5 cm depth, sample b

text: Sea sediment

text: brackish coastal sea sediment

text: sediment

text: Finland

characteristic: geographic location (longitude)

characteristic: investigation type

text: unidentified archaeon

text: HankoSGD

characteristic: project name

text: Gemax twin-barrel short gravity corer

characteristic: sample collection device or method

text: unidentified archaeon

text: Illumina MiSeq

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geological Survey of Finland

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Pockmark E sediment, 3.5-4.5 cm depth, sample b

characteristic: description

text: Sea sediment

characteristic: environment (biome)

text: brackish coastal sea sediment

text: sediment

text: Finland

text: unidentified archaeon

characteristic: organism

text: HankoSGD

text: Gemax twin-barrel short gravity corer

text: unidentified archaeon

text: Illumina MiSeq

text: water


text: Geological Survey of Finland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Groundwater sample from observation well HP101, sample a

text: Continental subsurface

text: esker

characteristic: environment (feature)

text: groundwater

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: unidentified bacterium

text: HankoSGD

text: submersible pump

text: unidentified bacterium

text: Illumina MiSeq

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geological Survey of Finland

text: public

text: Continental subsurface

text: esker

text: groundwater

text: Finland

characteristic: geographic location (longitude)

characteristic: investigation type

text: unidentified bacterium

text: HankoSGD

characteristic: project name

text: submersible pump

characteristic: sample collection device or method

text: unidentified bacterium

text: Illumina MiSeq

characteristic: sequencing method

text: water

characteristic: water environmental package


text: Geological Survey of Finland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Groundwater sample from obsolete water station, sample a

characteristic: description

text: Continental subsurface

characteristic: environment (biome)

text: sandy soil

text: groundwater

text: Finland

text: unidentified bacterium

characteristic: organism

text: HankoSGD

text: collection of flow from the end of the pipe

text: unidentified bacterium

text: Illumina MiSeq

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geological Survey of Finland

text: public

text: Groundwater sample from obsolete water station, sample b

text: Continental subsurface

text: sandy soil

characteristic: environment (feature)

text: groundwater

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: unidentified bacterium

text: HankoSGD

text: unidentified bacterium

text: Illumina MiSeq

characteristic: title

text: water


text: Geological Survey of Finland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Seawater above pockmark B, sample a

text: Sea

text: brackish coastal sea

text: seawater

text: Finland

characteristic: geographic location (longitude)

characteristic: investigation type

text: unidentified bacterium

text: HankoSGD

characteristic: project name

text: Limnos water sampler

characteristic: sample collection device or method

text: unidentified bacterium

text: Illumina MiSeq

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geological Survey of Finland

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Seawater above pockmark B, sample a+b0.1um

characteristic: description

text: Sea

characteristic: environment (biome)

text: brackish coastal sea

text: seawater

text: Finland

text: unidentified bacterium

characteristic: organism

text: HankoSGD

text: Limnos water sampler

text: unidentified bacterium

text: Illumina MiSeq

text: water


text: Geological Survey of Finland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Seawater above pockmark B, sample b

text: Sea

text: brackish coastal sea

characteristic: environment (feature)

text: seawater

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: unidentified bacterium

text: HankoSGD

text: Limnos water sampler

text: unidentified bacterium

text: Illumina MiSeq

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geological Survey of Finland

text: public

text: Seawater above pockmark D, sample a

text: Sea

text: brackish coastal sea

text: seawater

text: Finland

characteristic: geographic location (longitude)

characteristic: investigation type

text: unidentified bacterium

text: HankoSGD

characteristic: project name

text: Limnos water sampler

characteristic: sample collection device or method

text: unidentified bacterium

text: Illumina MiSeq

characteristic: sequencing method

text: water

characteristic: water environmental package


text: Geological Survey of Finland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Seawater above pockmark D, sample a+b0.1um

characteristic: description

text: Sea

characteristic: environment (biome)

text: brackish coastal sea

text: seawater

text: Finland

text: unidentified bacterium

characteristic: organism

text: HankoSGD

text: Limnos water sampler

text: unidentified bacterium

text: Illumina MiSeq

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geological Survey of Finland

text: public

text: Seawater above pockmark D, sample b

text: Sea

text: brackish coastal sea

characteristic: environment (feature)

text: seawater

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: unidentified bacterium

text: HankoSGD

text: Limnos water sampler

text: unidentified bacterium

text: Illumina MiSeq

characteristic: title

text: water


text: Geological Survey of Finland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Seawater above pockmark E, sample a

text: Sea

text: brackish coastal sea

text: seawater

text: Finland

characteristic: geographic location (longitude)

characteristic: investigation type

text: unidentified bacterium

text: HankoSGD

characteristic: project name

text: Limnos water sampler

characteristic: sample collection device or method

text: unidentified bacterium

text: Illumina MiSeq

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geological Survey of Finland

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Seawater above pockmark E, sample b

characteristic: description

text: Sea

characteristic: environment (biome)

text: brackish coastal sea

text: seawater

text: Finland

text: unidentified bacterium

characteristic: organism

text: HankoSGD

text: Limnos water sampler

text: unidentified bacterium

text: Illumina MiSeq

text: water


text: Geological Survey of Finland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Seawater control sample from offshore station J, sample a

text: Sea

text: brackish coastal sea

characteristic: environment (feature)

text: seawater

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: unidentified bacterium

text: HankoSGD

text: Limnos water sampler

text: unidentified bacterium

text: Illumina MiSeq

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geological Survey of Finland

text: public

text: Seawater control sample from offshore station J, sample b

text: Sea

text: brackish coastal sea

text: seawater

text: Finland

characteristic: geographic location (longitude)

characteristic: investigation type

text: unidentified bacterium

text: HankoSGD

characteristic: project name

text: Limnos water sampler

characteristic: sample collection device or method

text: unidentified bacterium

text: Illumina MiSeq

characteristic: sequencing method

text: water

characteristic: water environmental package


text: Geological Survey of Finland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Pockmark B sediment, 1.5-2.5 cm depth, sample a

characteristic: description

text: Sea sediment

characteristic: environment (biome)

text: brackish coastal sea sediment

text: sediment

text: Finland

text: unidentified bacterium

characteristic: organism

text: HankoSGD

text: box corer

text: unidentified bacterium

text: Illumina MiSeq

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geological Survey of Finland

text: public

text: Pockmark B sediment, 3.5-4.5 cm depth, sample a

text: Sea sediment

text: brackish coastal sea sediment

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: unidentified bacterium

text: HankoSGD

text: box corer

text: unidentified bacterium

text: Illumina MiSeq

characteristic: title

text: water


text: Geological Survey of Finland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Pockmark B sediment, 1.5-2.5 cm depth, sample b

text: Sea sediment

text: brackish coastal sea sediment

text: sediment

text: Finland

characteristic: geographic location (longitude)

characteristic: investigation type

text: unidentified bacterium

text: HankoSGD

characteristic: project name

text: box corer

characteristic: sample collection device or method

text: unidentified bacterium

text: Illumina MiSeq

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geological Survey of Finland

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Pockmark B sediment, 3.5-4.5 cm depth, sample b

characteristic: description

text: Sea sediment

characteristic: environment (biome)

text: brackish coastal sea sediment

text: sediment

text: Finland

text: unidentified bacterium

characteristic: organism

text: HankoSGD

text: box corer

text: unidentified bacterium

text: Illumina MiSeq

text: water


text: Geological Survey of Finland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Pockmark D sediment, 1.5-2.5 cm depth, sample a

text: Sea sediment

text: brackish coastal sea sediment

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: unidentified bacterium

text: HankoSGD

text: box corer

text: unidentified bacterium

text: Illumina MiSeq

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geological Survey of Finland

text: public

text: Pockmark D sediment, 3.5-4.5 cm depth, sample a

text: Sea sediment

text: brackish coastal sea sediment

text: sediment

text: Finland

characteristic: geographic location (longitude)

characteristic: investigation type

text: unidentified bacterium

text: HankoSGD

characteristic: project name

text: box corer

characteristic: sample collection device or method

text: unidentified bacterium

text: Illumina MiSeq

characteristic: sequencing method

text: water

characteristic: water environmental package


text: Geological Survey of Finland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Pockmark D sediment, 1.5-2.5 cm depth, sample b

characteristic: description

text: Sea sediment

characteristic: environment (biome)

text: brackish coastal sea sediment

text: sediment

text: Finland

text: unidentified bacterium

characteristic: organism

text: HankoSGD

text: box corer

text: unidentified bacterium

text: Illumina MiSeq

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geological Survey of Finland

text: public

text: Pockmark D sediment, 3.5-4.5 cm depth, sample b

text: Sea sediment

text: brackish coastal sea sediment

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: unidentified bacterium

text: HankoSGD

text: box corer

text: unidentified bacterium

text: Illumina MiSeq

characteristic: title

text: water


text: Geological Survey of Finland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Pockmark E sediment, 1.5-2.5 cm depth, sample a

text: Sea sediment

text: brackish coastal sea sediment

text: sediment

text: Finland

characteristic: geographic location (longitude)

characteristic: investigation type

text: unidentified bacterium

text: HankoSGD

characteristic: project name

text: Gemax twin-barrel short gravity corer

characteristic: sample collection device or method

text: unidentified bacterium

text: Illumina MiSeq

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geological Survey of Finland

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Pockmark E sediment, 3.5-4.5 cm depth, sample a

characteristic: description

text: Sea sediment

characteristic: environment (biome)

text: brackish coastal sea sediment

text: sediment

text: Finland

text: unidentified bacterium

characteristic: organism

text: HankoSGD

text: Gemax twin-barrel short gravity corer

text: unidentified bacterium

text: Illumina MiSeq

text: water


text: Geological Survey of Finland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Pockmark E sediment, 1.5-2.5 cm depth, sample b

text: Sea sediment

text: brackish coastal sea sediment

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: unidentified bacterium

text: HankoSGD

text: Gemax twin-barrel short gravity corer

text: unidentified bacterium

text: Illumina MiSeq

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geological Survey of Finland

text: public

text: Pockmark E sediment, 3.5-4.5 cm depth, sample b

text: Sea sediment

text: brackish coastal sea sediment

text: sediment

text: Finland

characteristic: geographic location (longitude)

characteristic: investigation type

text: unidentified bacterium

text: HankoSGD

characteristic: project name

text: Gemax twin-barrel short gravity corer

characteristic: sample collection device or method

text: unidentified bacterium

text: Illumina MiSeq

characteristic: sequencing method

text: water

characteristic: water environmental package


text: Liver Cell Line

characteristic: ArrayExpress-Phenotype

text: Homo sapiens

characteristic: ArrayExpress-Species

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: Homo sapiens

characteristic: organism

text: Homo sapiens


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CBMSO

text: public

text: GENGS-CBMSO

characteristic: broker name

text: house mouse

text: RNA-seq analysis of 6 human and 6 mouse striatum samples: 3 control human subjects and 3 Huntington's disease patients, together with 3 control (wild type) mice and 3 early symptomatic R6/1 mice. The RNA-seq libraries were prepared with KAPA Stranded mRNA-Seq Illumina® Platforms Kit (Roche) and were sequenced on HiSeq 2500 (Illumina, Inc) with a read length of 2x101bp.

characteristic: description

text: Mus musculus

text: Mus musculus

text: control (wild type) mice (Male-3.5 month-old)

characteristic: title


text: CBMSO

text: public

text: GENGS-CBMSO

text: house mouse

text: Mus musculus

text: Mus musculus

text: Early symptomatic R6/1 mice (Male-3.5 month-old)


text: CBMSO

text: public

text: GENGS-CBMSO

text: human

text: Homo sapiens

text: Homo sapiens

text: control human (Male 76-year-old)


text: CBMSO

text: public

text: GENGS-CBMSO

text: human

text: Homo sapiens

text: Homo sapiens

text: Huntington's disease human patient (Male 49-year-old)


text: CBMSO

text: public

text: GENGS-CBMSO

text: human

text: Homo sapiens

text: Homo sapiens

text: Huntington's disease huma patient (Female 64-year-old)


text: CBMSO

text: public

text: GENGS-CBMSO

text: human

text: Homo sapiens

text: Homo sapiens

text: control human (Male 51-year-old)


text: CBMSO

text: public

text: GENGS-CBMSO

text: human

text: Homo sapiens

text: Homo sapiens

text: control human (Male 55-year-old)


text: CBMSO

text: public

text: GENGS-CBMSO

text: human

text: Homo sapiens

text: Homo sapiens

text: Huntington's disease huma patient (Male 57-year-old)


text: Research Centre for Natural Sciences

text: public

tag: Namespace:Research Centre for Natural Sciences

characteristic: cell line

text: chicken

text: Single DT40 53BP1 knock out starting clone

text: Gallus gallus

characteristic: read length

text: Gallus gallus

text: DT40 53BP1 starting


text: Research Centre for Natural Sciences

characteristic: INSDC center name

text: public

text: chicken

text: Single DT40 53BP1 knock out cell clone isolated following a mock treatment regime

text: Gallus gallus

text: Gallus gallus

text: DT40 53BP1 mock 1


text: Research Centre for Natural Sciences

characteristic: INSDC first public

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 53BP1 mock 2


text: Research Centre for Natural Sciences

characteristic: INSDC last update

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 53BP1 mock 3


text: Research Centre for Natural Sciences

text: public

characteristic: INSDC status

text: chicken

text: Single DT40 53BP1 knock out cell clone isolated following a cisplatin treatment regime

text: Gallus gallus

text: Gallus gallus

text: DT40 53BP1 cisplatin 1


text: Research Centre for Natural Sciences

text: public

characteristic: SRA accession

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 53BP1 cisplatin 2


text: Research Centre for Natural Sciences

text: public

characteristic: Submitter Id

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 53BP1 cisplatin 3


text: Research Centre for Natural Sciences

text: public

text: chicken

characteristic: common name

text: Single DT40 53BP1 BRCA1 knock out starting clone

text: Gallus gallus

text: Gallus gallus

text: DT40 53BP1 BRCA1 starting


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 53BP1 BRCA1 knock out cell clone isolated following a mock treatment regime

text: Gallus gallus

characteristic: organism

text: Gallus gallus

text: DT40 53BP1 BRCA1 mock 1


characteristic: ENA-CHECKLIST

text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 53BP1 BRCA1 mock 2


characteristic: ENA-FIRST-PUBLIC

text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 53BP1 BRCA1 mock 3


characteristic: ENA-LAST-UPDATE

text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 53BP1 BRCA1 knock out cell clone isolated following a cisplatin treatment regime

text: Gallus gallus

text: Gallus gallus

text: DT40 53BP1 BRCA1 cisplatin 1


characteristic: External Id

text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 53BP1 BRCA1 cisplatin 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 53BP1 BRCA1 cisplatin 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 BRCA1 knock out starting clone

text: Gallus gallus

text: Gallus gallus

text: DT40 BRCA1 starting


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 BRCA1 knock out cell clone isolated following a mock treatment regime

text: Gallus gallus

text: Gallus gallus

text: DT40 BRCA1 mock 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 BRCA1 mock 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 BRCA1 mock 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 BRCA1 mock 4


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 BRCA1 mock 5


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 BRCA1 mock 6


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 BRCA1 knock out cell clone isolated following a cisplatin treatment regime

text: Gallus gallus

text: Gallus gallus

text: DT40 BRCA1 cisplatin 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 BRCA1 cisplatin 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 BRCA1 cisplatin 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 BRCA2 knock out starting clone

text: Gallus gallus

text: Gallus gallus

text: DT40 BRCA2 starting


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 BRCA2 knock out cell clone isolated following a mock treatment regime

text: Gallus gallus

text: Gallus gallus

text: DT40 BRCA2 mock 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 BRCA2 mock 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 BRCA2 mock 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 BRCA2 knock out cell clone isolated following a cisplatin treatment regime

text: Gallus gallus

text: Gallus gallus

text: DT40 BRCA2 cisplatin 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 BRCA2 cisplatin 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 BRCA2 cisplatin 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 KU70 knock out starting clone

text: Gallus gallus

text: Gallus gallus

text: DT40 KU70 starting


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 KU70 knock out cell clone isolated following a mock treatment regime

text: Gallus gallus

text: Gallus gallus

text: DT40 KU70 mock 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 KU70 mock 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 KU70 mock 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 KU70 mock 4


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 KU70 knock out cell clone isolated following a cisplatin treatment regime

text: Gallus gallus

text: Gallus gallus

text: DT40 KU70 cisplatin 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 KU70 cisplatin 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 KU70 cisplatin 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 KU70 BRCA1 knock out starting clone

text: Gallus gallus

text: Gallus gallus

text: DT40 KU70 BRCA1 starting


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 KU70 BRCA1 knock out cell clone isolated following a mock treatment regime

text: Gallus gallus

text: Gallus gallus

text: DT40 KU70 BRCA1 mock 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 KU70 BRCA1 mock 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 KU70 BRCA1 mock 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 KU70 BRCA1 knock out cell clone isolated following a cisplatin treatment regime

text: Gallus gallus

text: Gallus gallus

text: DT40 KU70 BRCA1 cisplatin 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 KU70 BRCA1 cisplatin 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 KU70 BRCA1 cisplatin 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 POLH knock out starting clone

text: Gallus gallus

text: Gallus gallus

text: DT40 POLH starting


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 POLH knock out cell clone isolated following a mock treatment regime

text: Gallus gallus

text: Gallus gallus

text: DT40 POLH mock 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 POLH mock 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 POLH mock 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 POLH BRCA1 knock out starting clone

text: Gallus gallus

text: Gallus gallus

text: DT40 POLH BRCA1 starting


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 POLH BRCA1 knock out cell clone isolated following a mock treatment regime

text: Gallus gallus

text: Gallus gallus

text: DT40 POLH BRCA1 mock 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 POLH BRCA1 mock 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 POLH BRCA1 mock 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 POLK knock out starting clone

text: Gallus gallus

text: Gallus gallus

text: DT40 POLK starting


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 POLK knock out cell clone isolated following a mock treatment regime

text: Gallus gallus

text: Gallus gallus

text: DT40 POLK mock 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 POLK mock 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 POLK mock 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 POLK BRCA1 knock out starting clone

text: Gallus gallus

text: Gallus gallus

text: DT40 POLK BRCA1 starting


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 POLK BRCA1 knock out cell clone isolated following a mock treatment regime

text: Gallus gallus

text: Gallus gallus

text: DT40 POLK BRCA1 mock 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 POLK BRCA1 mock 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 POLK BRCA1 mock 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 REV1 knock out starting clone

text: Gallus gallus

text: Gallus gallus

text: DT40 REV1 starting


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 REV1 knock out cell clone isolated following a mock treatment regime

text: Gallus gallus

text: Gallus gallus

text: DT40 REV1 mock 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 REV1 mock 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 REV1 mock 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 REV1 BRCA1 knock out starting clone

text: Gallus gallus

text: Gallus gallus

text: DT40 REV1 BRCA1 starting


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 REV1 BRCA1 knock out cell clone isolated following a mock treatment regime

text: Gallus gallus

text: Gallus gallus

text: DT40 REV1 BRCA1 mock 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 REV1 BRCA1 mock 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 REV1 BRCA1 mock 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 WT knock out starting clone

text: Gallus gallus

text: Gallus gallus

text: DT40 WT starting


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 WT knock out cell clone isolated following a mock treatment regime

text: Gallus gallus

text: Gallus gallus

text: DT40 WT mock 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 WT mock 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 WT mock 3


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Single DT40 WT knock out cell clone isolated following a cisplatin treatment regime

text: Gallus gallus

text: Gallus gallus

text: DT40 WT cisplatin 1


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 WT cisplatin 2


text: Research Centre for Natural Sciences

text: public

text: chicken

text: Gallus gallus

text: Gallus gallus

text: DT40 WT cisplatin 3