text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Arg.20


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UPSC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metagenome

characteristic: common name

text: ITS2 amplification of root samples for fungal community

characteristic: description

text: metagenome

characteristic: organism

text: metagenome

text: DNA from Scots pine seedling root Arg.21

characteristic: title


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Arg.22


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Ctrl.1


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Ctrl.2


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Ctrl.3


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Ctrl.4


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Ctrl.5


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Ctrl.6


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Ctrl.7


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Ctrl.8


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Ctrl.9


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Ctrl.10


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Ctrl.11


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Ctrl.12


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Ctrl.13


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Osm.1


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Osm.2


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Osm.3


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Osm.4


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Osm.5


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Osm.6


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Osm.7


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Osm.8


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Osm.9


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Osm.10


text: UPSC

text: public

text: metagenome

text: ITS2 amplification of root samples for fungal community

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Osm.11


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Osm.12


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Osm.13


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Osm.14


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Osm.15


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Osm.16


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Osm.17


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling root Osm.18


text: UPSC

text: public

text: metagenome

text: ITS2 amplification of soil samples for fungal community

text: metagenome

text: metagenome

text: DNA from Scots pine seedling soil S.E.arg.1


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling soil S.E.arg.2


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling soil S.E.arg.3


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling soil S.E.ctrl.1


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling soil S.E.ctrl.2


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling soil S.E.ctrl.3


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling soil S.E.osm.1.1


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling soil S.E.osm.1.2


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling soil S.E.osm.2


text: UPSC

text: public

text: metagenome

text: metagenome

text: metagenome

text: DNA from Scots pine seedling soil S.E.osm.3


text: public

tag: Namespace:Klinikum rechts der Isar, II. Medizinische Klinik

text: house mouse

text: sorted CD4+EGFP+ peripheral Tregs (Barcode AAATTG)

text: Mus musculus

text: Mus musculus

text: RNASample


text: Klinikum rechts der Isar, II. Medizinische Klinik

text: public

text: house mouse

text: sorted CD4+EGFP+ peripheral Tregs (Barcode AATACA)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: sorted CD4+EGFP+ peripheral Tregs (Barcode AATCTT)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: sorted CD4+EGFP+ peripheral Tregs (Barcode ATGAAT)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: sorted CD4+EGFP+ peripheral Tregs (Barcode ATTCTA)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: sorted CD4+EGFP+ peripheral Tregs (Barcode ATTTCA)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: sorted CD4+EGFP+ peripheral Tregs (Barcode GTACCG)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: sorted CD4+EGFP+ peripheral Tregs (Barcode TAAGAT)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: sorted CD4+EGFP+ peripheral Tregs (Barcode TAATGA)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: sorted CD4+EGFP+ peripheral Tregs (Barcode TACTAT)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: sorted CD4+EGFP+ peripheral Tregs (Barcode TAGTAA)

text: Mus musculus

text: Mus musculus

text: RNASample


PeripheralTregs-Undetermined

text: public

text: PeripheralTregs-Undetermined

text: house mouse

text: Reads not assigned to any Barcode

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: sorted activated Tregs_DMSO (Barcode AAAACT)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: sorted activated Tregs_DMSO (Barcode ATATAG)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: sorted activated Tregs_Mepazine (Barcode CCCACG)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: sorted activated Tregs_Mepazine (Barcode CCCCGT)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: sorted activated Tregs_Mepazine (Barcode CGGTGG)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: sorted activated Tregs_Mepazine (Barcode CGTGGG)

text: Mus musculus

text: Mus musculus

text: RNASample


text: Klinikum rechts der Isar, II. Medizinische Klinik

text: public

text: house mouse

text: sorted activated Tregs_Mepazine (Barcode GCTAGA)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: sorted activated Tregs_Mepazine (Barcode GCTCGC)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: sorted activated Tregs_Mepazine (Barcode GGAGCC)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: sorted activated Tregs_Mepazine (Barcode GGGATT)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: sorted activated Tregs_DMSO (Barcode GTTTAT)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: sorted activated Tregs_DMSO (Barcode TAAAGT)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: sorted activated Tregs_DMSO (Barcode TGTTTA)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: sorted activated Tregs_DMSO (Barcode TTAATC)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: Reads not assigned to any barcode

text: Mus musculus

text: Mus musculus

text: RNASample


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

text: public

tag: Namespace:Tree of Life Programme

text: ANASTASIA DIAKOU | DIONISIOS YOULATOS | DIMITRA LIDA RAMMOU

characteristic: collected by

text: ARISTOTLE UNIVERSITY OF THESSALONIKI | ARISTOTLE UNIVERSITY OF THESSALONIKI | ARISTOTLE UNIVERSITY OF THESSALONIKI

characteristic: collecting institution

characteristic: collection date

text: European suslik

text: Greece

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (elevation)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: THESSALONIKI

characteristic: geographic location (region and locality)

text: ARTIFICIAL HABITAT WITH LOW-STALK VEGETATION

characteristic: habitat

characteristic: identified by

text: adult

characteristic: lifestage

text: Spermophilus citellus

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

characteristic: project name

text: Spermophilus citellus

text: FEMALE

characteristic: sex

text: ERGA AT GR 011

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: N

characteristic: symbiont

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BOGOR AGRICULTURAL UNIVERSITY (IPB)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:BOGOR AGRICULTURAL UNIVERSITY (IPB)

characteristic: Submitter Id

text: Deden Derajat Matra

characteristic: collected by

text: Bogor Agricultural University (IPB University)

characteristic: collecting institution

text: Long reads sequencing for M. casturi (Pinari) RNA

characteristic: description

text: Indonesia

text: Banjar, Kalimantan Selatan

text: wetland

text: adult

text: Mangifera casturi

characteristic: organism

text: Leaves

text: ORG.one

text: Mangifera casturi

text: hermaphrodite

text: Whole Transcriptome Sequencing of Pinari

characteristic: title


text: BOGOR AGRICULTURAL UNIVERSITY (IPB)

text: public

text: Deden Derajat Matra

characteristic: collection date

text: Long reads sequencing for M. casturi (Pelipisan) RNA

text: Indonesia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Banjar, Kalimantan Selatan

characteristic: geographic location (region and locality)

text: wetland

characteristic: habitat

text: adult

characteristic: lifestage

text: Mangifera casturi

text: Leaves

characteristic: organism part

text: ORG.one

characteristic: project name

text: Mangifera casturi

text: hermaphrodite

characteristic: sex

characteristic: specimen voucher

text: Whole Transcriptome Sequencing of Pelipisan


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BOGOR AGRICULTURAL UNIVERSITY (IPB)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Deden Derajat Matra

text: Long reads sequencing for M. casturi (Cuban) RNA

text: Indonesia

text: Banjar, Kalimantan Selatan

text: wetland

text: adult

text: Mangifera casturi

text: Leaves

text: ORG.one

text: Mangifera casturi

text: hermaphrodite

text: Whole Transcriptome Sequencing of Cuban


text: BOGOR AGRICULTURAL UNIVERSITY (IPB)

text: public

text: Deden Derajat Matra

characteristic: collected by

characteristic: collecting institution

characteristic: collection date

text: Long reads sequencing for M. casturi (Kasturi) RNA

characteristic: description

text: Indonesia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Banjar, Kalimantan Selatan

characteristic: geographic location (region and locality)

text: wetland

text: adult

text: Mangifera casturi

characteristic: organism

text: Leaves

text: ORG.one

text: Mangifera casturi

text: hermaphrodite

text: Whole Transcriptome Sequencing of Kasturi

characteristic: title


text: Anopheles gambiae

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: African malaria mosquito

characteristic: common name

text: Anopheles gambiae

text: Anopheles gambiae

characteristic: subject id


E-MTAB-10905:HFF (exosomes in medium)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10905:HFF (exosomes in medium)

tag: Namespace:CAS Key Laboratory of Nano-Bio Interface, Suzhou Institute of Nano-Tech and Nano-Bionics, Chinese Academy of Sciences.

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: Homo sapiens cell line

characteristic: cell line

text: fibroblast

characteristic: cell type

text: human

text: Protocols: We used repeated freeze-thaw approach to obtain exoomes that entrapped in ECM; We used ultracentrifugation-based methods to obtain exoomes that secreted in supernatant Total RNA was extracted and purified using the mirVanaTM miRNA Isolation Kit without phenol (Ambion, USA) TruSeq Small RNA Sample Prep Kits (Illumina, San Diego, USA) were used to construct miRNA sequencing libraries

text: extracellular vesicular exosome

characteristic: fraction

text: wild type genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: foreskin

characteristic: organism part

text: cell culture supernatant

characteristic: sampling site

text: Homo sapiens

text: HFF (exosomes in medium)


name: E-MTAB-10905:HFF-CBD-Lamp2b  (exosomes in ECM)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CAS Key Laboratory of Nano-Bio Interface, Suzhou Institute of Nano-Tech and Nano-Bionics, Chinese Academy of Sciences.

text: public

text: ArrayExpress

text: Homo sapiens cell line

text: fibroblast

text: human

characteristic: description

text: extracellular vesicular exosome

text: overexpression of CBD-Lamp2b

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: foreskin

text: extracellular matrix

text: Homo sapiens

text: HFF-CBD-Lamp2b (exosomes in ECM)

characteristic: title


name: E-MTAB-10905:HFF-Lamp2b  (exosomes in medium)

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ArrayExpress

text: Homo sapiens cell line

text: fibroblast

text: human

characteristic: common name

text: extracellular vesicular exosome

text: overexpression of Lamp2b

text: Homo sapiens

text: Homo sapiens

text: foreskin

text: cell culture supernatant

text: Homo sapiens

text: HFF-Lamp2b (exosomes in medium)


name: E-MTAB-10905:hUCMSCs  (exosomes in medium)

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: Homo sapiens cell line

characteristic: cell line

text: mesenchymal stem cell

text: human

text: extracellular vesicular exosome

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: umbilical cord

text: cell culture supernatant

text: Homo sapiens

text: hUCMSCs (exosomes in medium)


text: UNIVERSITY OF BRITISH COLUMBIA

text: public

tag: Namespace:UNIVERSITY OF BRITISH COLUMBIA

characteristic: collection date

text: Norway rat

text: fecal

characteristic: isolation source

text: Rattus norvegicus

text: Rattus norvegicus

text: rat gut microbiota, fecal


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

text: Dutch COVID-19 response team

text: public

tag: Namespace:Dutch COVID-19 response team

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: not provided

characteristic: collecting institution

text: Dutch COVID-19 response team

characteristic: collector name

text: Human coronavirus 2019

text: A SARS-CoV-2 specfic multiplex PCR for Nanopore sequencing was performed, similar to amplicon-based approaches as previously described. In short, primers for 86 overlapping amplicons spanning the entire genome were designed using primal. The amplicon length was set to 500bp with 75bp overlap between the different amplicons. The libraries were generated using the native barcode kits from Nanopore (EXP-NBD104 and EXP-NBD114 and SQK-LSK109) and sequenced on a R9.4 flow cell multiplexing up to 24 samples per sequence run. Raw data was demultiplexed, amplicon primers were trimmed and human data was removed by mapping against the human reference genome.

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Zuid-Holland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: restricted access

characteristic: host subject id

characteristic: isolate

text: not collected

characteristic: isolation source host associated

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: Dutch COVID-19 response sample sequencing


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Dutch COVID-19 response team

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

characteristic: broker name

text: not provided

characteristic: collection date

text: Dutch COVID-19 response team

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Netherlands

text: Utrecht

text: Human

text: not collected

text: Homo sapiens

text: not provided

text: restricted access

text: not collected

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

text: Dutch COVID-19 response team

text: public

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: not provided

characteristic: collecting institution

text: Dutch COVID-19 response team

characteristic: collector name

text: Human coronavirus 2019

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Noord-Holland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: restricted access

characteristic: host subject id

characteristic: isolate

text: not collected


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Dutch COVID-19 response team

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

characteristic: broker name

text: not provided

characteristic: collection date

text: Dutch COVID-19 response team

text: Human coronavirus 2019

characteristic: common name

text: Netherlands

text: Limburg

text: Human

text: not collected

text: Homo sapiens

text: not provided

text: restricted access

text: not collected

characteristic: isolation source host associated

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

text: Dutch COVID-19 response team

text: public

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: not provided

characteristic: collecting institution

text: Dutch COVID-19 response team

characteristic: collector name

text: Human coronavirus 2019

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Noord-Brabant

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: restricted access

text: not collected

characteristic: organism

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Dutch COVID-19 response team

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

characteristic: broker name

text: not provided

characteristic: collection date

text: Dutch COVID-19 response team

text: Human coronavirus 2019

text: Netherlands

text: Gelderland

text: Human

text: not collected

text: Homo sapiens

text: not provided

characteristic: host sex

text: restricted access

characteristic: host subject id

characteristic: isolate

text: not collected


PAE

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

text: PAE

text: Norway rat

characteristic: common name

text: fecal

characteristic: isolation source

text: Rattus norvegicus

text: Rattus norvegicus

text: rat gut microbiota, fecal


CON

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

text: CON

text: Norway rat

text: fecal

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: rat gut microbiota, fecal

characteristic: title


characteristic: External Id

text: Hebrew university, Genetics department

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:Hebrew university, Genetics department

text: ArrayExpress

characteristic: cell line

text: embryonic stem cell

characteristic: cell type

text: human

text: Protocols: To distinguish PEG10-expressing cells (PEG10+), we performed intracellular antibody staining and sorted the different sub-populations using BD FACSAria. Our recently established mutant library on haploid hpESCs (based on hpES10 cell line) 30 was maintained for 4 weeks and frozen. Briefly, haploid-enriched cultures of hpES10 cell line were infected with a lentivirus library containing 181,131 sgRNAs at a multiplicity of infection of 0.3. Infected cells were selected with puromycin (Sigma) for seven days. gSYNC DNA extraction kit (Geneaid) PCR with Nextera overhangs

characteristic: description

text: pooled loss-of-function CRISPR library

characteristic: genotype

text: PEG10 negative

characteristic: immunophenotype

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


text: Hebrew university, Genetics department

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: embryonic stem cell

text: human

text: pooled loss-of-function CRISPR library

text: PEG10 positive

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Hebrew university, Genetics department

text: public

text: ArrayExpress

text: embryonic stem cell

text: human

characteristic: common name

text: pooled loss-of-function CRISPR library

text: unsorted

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-LAST-UPDATE

text: Hebrew university, Genetics department

text: public

text: ArrayExpress

text: embryonic stem cell

text: human

text: Protocols: Cells were washed with PBS and trypsinized gSYNC DNA extraction kit (Geneaid) The DNA was digested with MspI (NEB), Subsequently, bisulfite treatment was conducted using the ZYMO EZ DNA Methylation-Gold Kit. The converted DNAs are then amplified by twelve cycles of PCR, using 25 μl KAPA HiFi HotStart Uracil+ ReadyMix

text: ATF7IP knockout

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

characteristic: title


characteristic: External Id

text: Hebrew university, Genetics department

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: embryonic stem cell

text: human

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


text: Hebrew university, Genetics department

text: public

text: ArrayExpress

characteristic: cell line

text: embryonic stem cell

characteristic: cell type

text: human

characteristic: description

text: ZMYM2 knockout

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


text: University of Tartu, Estonia

characteristic: INSDC last update

text: public

text: ena-upload-cli v0.3.1 @ Galaxy

tag: Namespace:University of Tartu, Estonia

text: University of Tartu KoroGenoEST3 consortium, Estonia

characteristic: collecting institution

characteristic: collection date

text: Aare Abroi, Radko Avi, Taavi Päll, Heiki Niglas , Merit Pauskar, Arina Shablinskaja, Eveli Kallas, Andrio Lahesaare, Kai Truusalu, Dagmar Hoidmets, Olga Sadikova, Kaspar Ratnik, Hanna Sepp, Liidia Dotsenko, Jevgenia Epštein, Heleene Suija, Katrin Kaarna, Lili Milani, Mait Metspalu, Ott Eric Oopkaup, Ivar Koppel, Erik Jaaniso, Ivan Kuzmin, Uku Raudvere, Tuuli Reisberg, Hedi Peterson, Ulvi Gerst Talas, Paul Naaber, Mari-Anne Härma, Irja Lutsar, Kristi Huik

characteristic: collector name

text: Nasopharyngeal/oropharyngeal swab from Estonian Covid-19 patient

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

unit: year

characteristic: host age

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: host subject id

characteristic: host subject id

characteristic: isolate

characteristic: isolation source non-host-associated

characteristic: sample capture status

text: PCR tiled amplicon WGS of SARS-Cov-2, pre-selected subset from active surveillance


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Tartu, Estonia

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.3.1 @ Galaxy

characteristic: Submitter Id

characteristic: description

text: Estonia

text: human

text: diseased

text: Homo sapiens

text: female

text: host subject id

characteristic: organism

characteristic: title


text: University of Tartu, Estonia

characteristic: INSDC last update

text: public

text: ena-upload-cli v0.3.1 @ Galaxy

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: host subject id


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Tartu, Estonia

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.3.1 @ Galaxy

text: Estonia

text: human

text: not provided

text: Homo sapiens

text: female

text: host subject id

characteristic: host subject id

characteristic: isolate

characteristic: isolation source non-host-associated

characteristic: sample capture status


text: University of Tartu, Estonia

characteristic: INSDC last update

text: public

text: ena-upload-cli v0.3.1 @ Galaxy

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

characteristic: description

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: human

text: healthy

text: Homo sapiens

text: female

text: host subject id

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Tartu, Estonia

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.3.1 @ Galaxy

text: Estonia

text: human

characteristic: host common name

text: healthy

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: host subject id


characteristic: INSDC last update

text: public

tag: Namespace:Originating lab: Wales Specialist Virology Centre Sequencing lab: Pathogen Genomics Unit

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

characteristic: geographic location (region and locality)

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Originating lab: Wales Specialist Virology Centre Sequencing lab: Pathogen Genomics Unit

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: Wales

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

text: not provided

characteristic: title

text: not provided


characteristic: INSDC last update

text: public

tag: Namespace:Respiratory Virus Unit, Microbiology Services Colindale, Public Health England

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

text: not provided

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Quadram Institute Bioscience

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Quadram Institute Bioscience

text: COVID-19 Genomics UK Consortium

text: Quadram Institute Bioscience

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: receipt date

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


text: Respiratory Virus Unit, Microbiology Services Colindale, Public Health England

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

text: not provided

characteristic: title

text: not provided


COG-UK/PHEP-YYBYGHY

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/PHEP-YYBYGHY

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: receipt date

text: not provided

text: COG-UK/PHEP-YYBYGHY

text: not provided


characteristic: INSDC last update

text: public

tag: Namespace:Virology Department, Royal Infirmary of Edinburgh, NHS Lothian / School of Biological Sciences, University of Edinburgh

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Scotland

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

characteristic: organism

text: not provided

characteristic: title

text: not provided


COG-UK/PHWC-PDHCST

characteristic: INSDC last update

text: public

text: COG-UK/PHWC-PDHCST

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: COG-UK/PHWC-PDHCST

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Virology Department, Royal Infirmary of Edinburgh, NHS Lothian / School of Biological Sciences, University of Edinburgh

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: Scotland

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


COG-UK/PHWC-PRYBET

characteristic: INSDC last update

text: public

text: COG-UK/PHWC-PRYBET

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

text: not provided

text: not provided

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

characteristic: organism

text: not provided

text: COG-UK/PHWC-PRYBET

characteristic: title

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: Scotland

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: not provided


COG-UK/PHWC-PRYMKD

characteristic: INSDC last update

text: public

text: COG-UK/PHWC-PRYMKD

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/PHWC-PRYMKD

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

characteristic: organism

text: not provided

characteristic: title

text: not provided


COG-UK/PHWC-PRYSUF

characteristic: INSDC last update

text: public

text: COG-UK/PHWC-PRYSUF

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: COG-UK/PHWC-PRYSUF

text: not provided


COG-UK/PHWC-PDHRES

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/PHWC-PDHRES

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: Wales

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/PHWC-PDHRES

text: not provided

characteristic: virus identifier


characteristic: INSDC last update

text: public

tag: Namespace:University College London, Great Ormond Street Hospital for Children NHS Foundation Trust, Imperial College Healthcare NHS Trust

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

text: not provided

text: not provided

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

characteristic: organism

text: not provided

characteristic: title

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: Scotland

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: receipt date

text: not provided

text: not provided


characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

text: not provided

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SC

text: Lighthouse Lab in Milton Keynes

text: Samples prepared at Lighthouse Lab in Milton Keynes by The Lighthouse Lab in Milton Keynes and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

characteristic: description

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: Human

characteristic: organism

characteristic: title


text: SC

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Lighthouse Lab in Glasgow

characteristic: collecting institution

characteristic: collection date

text: Samples prepared at Lighthouse Lab in Glasgow by Harper VanSteenhouse, Yumi Kasai, David Gray, Carol Clugston, Anna Dominiczak and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Northern Ireland

text: Human


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: SC

text: Samples prepared at Berkshire and Surrey Pathology Services Lighthouse Laboratory by Berkshire and Surrey Pathology Services Lighthouse Laboratory and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

text: United Kingdom

text: England

text: Human

characteristic: host scientific name

characteristic: sample capture status


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SC

text: Berkshire and Surrey Pathology Services Lighthouse Laboratory

text: United Kingdom

text: England

text: Human


text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SC

text: Lighthouse Laboratory Plymouth

text: Samples prepared at Lighthouse Laboratory Plymouth by Lighthouse Laboratory Plymouth and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

characteristic: description

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: Human


text: SC

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: SC

text: Lighthouse Lab in Alderley Park

text: Samples prepared at Lighthouse Lab in Alderley Park by Jacquelyn Wynn, Mairead Hyland, The Lighthouse Lab in Alderley Park and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: England

text: Human

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: title


text: SC

text: public

text: SC

characteristic: broker name

text: Lighthouse Lab in Milton Keynes

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

text: Human

text: active surveillance in response to outbreak


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: COVID-19 Genomics UK Consortium

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: England

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: receipt date

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


COG-UK/PHEP-YYBYDZP

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/PHEP-YYBYDZP

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

text: not provided

text: not provided

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

text: not provided

text: COG-UK/PHEP-YYBYDZP

characteristic: title

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: SC

text: Lighthouse Lab in Alderley Park

characteristic: collection date

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

text: Human

characteristic: host scientific name


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: SC

text: Integrated Covid Hub North East

text: Samples prepared at Integrated Covid Hub North East by Integrated Covid Hub North East and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

text: United Kingdom

text: England

text: Human

characteristic: sample capture status


text: Quadram Institute Bioscience

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COVID-19 Genomics UK Consortium

text: Quadram Institute Bioscience

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: England

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: receipt date

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

text: not provided

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: organism

text: not provided

characteristic: title

text: not provided


text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SC

text: Lighthouse Lab in Glasgow

characteristic: description

text: United Kingdom

text: Scotland

text: Human

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: SC

text: Lighthouse Lab in Glasgow

text: United Kingdom

text: England

text: Human


COG-UK/PHWC-PRYJHY

text: public

text: COG-UK/PHWC-PRYJHY

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: Wales

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/PHWC-PRYJHY

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SC

text: Rosalind Franklin Laboratory

text: Samples prepared at Rosalind Franklin Laboratory by Donald Fraser, Suki Lee, Rob Howes, The Rosalind Franklin Laboratory and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: Human

characteristic: host scientific name

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Lighthouse Lab in Milton Keynes

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

text: England

text: Human


characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: COVID-19 Genomics UK Consortium

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: Wales

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Scotland

characteristic: geographic location (region and locality)

text: not provided

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status

text: not provided

characteristic: title

text: not provided


COG-UK/PHWC-PDHADC

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: COG-UK/PHWC-PDHADC

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: Wales

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: not provided

text: COG-UK/PHWC-PDHADC

text: not provided


COG-UK/PHEP-YYBYFWT

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/PHEP-YYBYFWT

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: receipt date

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/PHEP-YYBYFWT

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SC

characteristic: broker name

text: Lighthouse Lab in Alderley Park

characteristic: collecting institution

characteristic: collection date

characteristic: description

text: United Kingdom

text: England

text: Human

characteristic: host scientific name

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Scotland

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

text: not provided

text: not provided


COG-UK/PHWC-PDHMMJ

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: COG-UK/PHWC-PDHMMJ

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/PHWC-PDHMMJ

text: not provided

characteristic: virus identifier


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: receipt date

characteristic: sample capture status

text: not provided

characteristic: title

text: not provided


characteristic: ENA-CHECKLIST

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SC

characteristic: broker name

text: Lighthouse Lab in Alderley Park

characteristic: collecting institution

characteristic: collection date

characteristic: description

text: United Kingdom

text: Wales

text: Human

characteristic: host scientific name


COG-UK/PHWC-PRYCJR

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/PHWC-PRYCJR

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: Wales

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/PHWC-PRYCJR

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SC

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: Human

characteristic: sample capture status

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SC

text: Lighthouse Lab in Glasgow

characteristic: description

text: United Kingdom

text: Wales

text: Human

characteristic: host scientific name


characteristic: ENA-CHECKLIST

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SC

text: Lighthouse Lab in Glasgow

text: United Kingdom

text: Scotland

text: Human

characteristic: organism


text: SC

characteristic: INSDC last update

text: public

text: SC

characteristic: broker name

text: Lighthouse Lab in Glasgow

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

text: England

text: Human


text: public

text: COVID-19 Genomics UK Consortium

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

characteristic: title

text: not provided

characteristic: virus identifier


COG-UK/PHWC-PDAUPF

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/PHWC-PDAUPF

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: Wales

text: not provided

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: organism

text: not provided

text: COG-UK/PHWC-PDAUPF

text: not provided


text: Quadram Institute Bioscience

text: public

text: COVID-19 Genomics UK Consortium

characteristic: broker name

text: Quadram Institute Bioscience

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: receipt date

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Northumbria University / South Tees Hospitals NHS Foundation Trust / North Cumbria Integrated Care NHS Foundation Trust / North Tees and Hartlepool NHS Foundation Trust / Newcastle Hospitals NHS Foundation Trust

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

characteristic: title

text: not provided

characteristic: virus identifier


text: SC

text: public

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Lighthouse Lab in Milton Keynes

characteristic: collecting institution

characteristic: collection date

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: Human

characteristic: host scientific name

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: COVID-19 Genomics UK Consortium

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: Wales

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: not provided


text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Lighthouse Laboratory Plymouth

characteristic: collecting institution

characteristic: collection date

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

text: Human

characteristic: sample capture status

characteristic: title


COG-UK/PHWC-PDHUNU

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: COG-UK/PHWC-PDHUNU

text: COVID-19 Genomics UK Consortium

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: Wales

characteristic: geographic location (region and locality)

text: not provided

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: organism

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/PHWC-PDHUNU

text: not provided

characteristic: virus identifier


text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Lighthouse Lab in Alderley Park

characteristic: collecting institution

characteristic: collection date

characteristic: description

text: United Kingdom

text: England

text: Human


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Scotland

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: not provided

characteristic: title

text: not provided


text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Integrated Covid Hub North East

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: Human

characteristic: host scientific name

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: SC

text: Lighthouse Lab in Alderley Park

characteristic: collecting institution

characteristic: collection date

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

text: Human


COG-UK/PHWC-PDHRHP

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: COG-UK/PHWC-PDHRHP

text: COVID-19 Genomics UK Consortium

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: Wales

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/PHWC-PDHRHP

characteristic: title

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Rosalind Franklin Laboratory

characteristic: collecting institution

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: Human

characteristic: host scientific name

characteristic: organism


text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SC

text: Health Services Laboratories

characteristic: collection date

text: Samples prepared at Health Services Laboratories by Health Services Laboratories and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

text: Human

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: SC

text: Rosalind Franklin Laboratory

text: United Kingdom

text: Wales

text: Human

characteristic: title


characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COVID-19 Genomics UK Consortium

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: England

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: receipt date

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Lighthouse Lab in Milton Keynes

characteristic: collecting institution

characteristic: collection date

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

characteristic: geographic location (region and locality)

text: Human

characteristic: host scientific name

characteristic: organism

characteristic: sample capture status


COG-UK/PHWC-PDHKZT

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/PHWC-PDHKZT

text: COVID-19 Genomics UK Consortium

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: Wales

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: COG-UK/PHWC-PDHKZT

characteristic: title

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Quadram Institute Bioscience

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

text: Quadram Institute Bioscience

characteristic: collecting institution

characteristic: collection date

text: not provided

text: not provided

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: receipt date

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


COG-UK/PHEC-YYBMPRW

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/PHEC-YYBMPRW

text: COVID-19 Genomics UK Consortium

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: England

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status

text: not provided

text: COG-UK/PHEC-YYBMPRW

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Lighthouse Lab in Milton Keynes

characteristic: collecting institution

characteristic: collection date

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: Human

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COVID-19 Genomics UK Consortium

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: Wales

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Lighthouse Lab in Glasgow

characteristic: collecting institution

characteristic: collection date

characteristic: description

text: United Kingdom

text: Scotland

text: Human

characteristic: host scientific name

characteristic: organism

characteristic: sample capture status


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SC

text: Lighthouse Lab in Glasgow

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: Human

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SC

text: Lighthouse Lab in Alderley Park

text: United Kingdom

text: England

text: Human


text: SC

text: public

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Lighthouse Lab in Alderley Park

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

text: Northern Ireland

text: Human


text: SC

text: public

text: SC

text: Integrated Covid Hub North East

characteristic: description

text: United Kingdom

text: England

text: Human

characteristic: host scientific name

characteristic: organism

characteristic: sample capture status


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: SC

text: Lighthouse Lab in Glasgow

text: United Kingdom

text: Wales

text: Human


text: SC

text: public

characteristic: SRA accession

text: SC

text: Lighthouse Lab in Alderley Park

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

characteristic: geographic location (region and locality)

text: Human

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SC

text: Lighthouse Lab in Alderley Park

text: United Kingdom

text: Scotland

text: Human


text: SC

text: public

characteristic: Submitter Id

text: SC

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

text: England

text: Human


text: SC

text: public

text: SC

text: Lighthouse Laboratory Plymouth

characteristic: description

text: United Kingdom

text: England

text: Human

characteristic: host scientific name

characteristic: organism

characteristic: sample capture status


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University College London, Great Ormond Street Hospital for Children NHS Foundation Trust, Imperial College Healthcare NHS Trust

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: COVID-19 Genomics UK Consortium

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: England

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

text: not provided

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: receipt date

text: not provided

characteristic: title

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: SC

text: Rosalind Franklin Laboratory

characteristic: description

text: United Kingdom

text: Wales

text: Human

characteristic: host scientific name

characteristic: organism

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: SC

text: Rosalind Franklin Laboratory

text: United Kingdom

text: England

text: Human


COG-UK/NORT-YYFJAH

text: Northumbria University / South Tees Hospitals NHS Foundation Trust / North Cumbria Integrated Care NHS Foundation Trust / North Tees and Hartlepool NHS Foundation Trust / Newcastle Hospitals NHS Foundation Trust

text: public

text: COG-UK/NORT-YYFJAH

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/NORT-YYFJAH

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: SC

text: Lighthouse Lab in Milton Keynes

characteristic: description

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: Human

characteristic: host scientific name

characteristic: organism

characteristic: sample capture status

characteristic: title


text: SC

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Lighthouse Lab in Milton Keynes

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Scotland

text: Human


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Originating lab: Wales Specialist Virology Centre Sequencing lab: Pathogen Genomics Unit

text: public

text: COVID-19 Genomics UK Consortium

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: Wales

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Centre for Enzyme Innovation, University of Portsmouth / Translational Research Laboratory, Portsmouth Hospitals NHS Trust / Hampshire Hospitals NHS Foundation Trust / Bournemouth University / University Hospitals Dorset NHS Foundation Trust / Brighton and Sussex University Hospitals NHS Trust / Dartford and Gravesham NHS Trust / Isle of Wight NHS Trust / Maidstone and Tunbridge Wells NHS Trust / University Hospital Southampton NHS Foundation Trust

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

text: not provided

text: not provided

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: not provided

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

characteristic: title

text: not provided


tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: SC

text: Lighthouse Lab in Alderley Park

characteristic: collecting institution

characteristic: collection date

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

text: Human


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COVID-19 Genomics UK Consortium

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: Scotland

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


COG-UK/PHWC-PRYNRA

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: COG-UK/PHWC-PRYNRA

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

text: not provided

text: United Kingdom

text: Wales

characteristic: geographic location (region and locality)

text: not provided

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status

text: not provided

text: COG-UK/PHWC-PRYNRA

characteristic: title

text: not provided


COG-UK/PHWC-PDSYJR

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/PHWC-PDSYJR

text: COVID-19 Genomics UK Consortium

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

text: not provided

text: COG-UK/PHWC-PDSYJR

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Lighthouse Lab in Alderley Park

characteristic: collecting institution

characteristic: collection date

characteristic: description

text: United Kingdom

text: Wales

characteristic: geographic location (region and locality)

text: Human


text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SC

text: Lighthouse Lab in Glasgow

text: United Kingdom

text: England

text: Human

characteristic: host scientific name

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: SC

text: Lighthouse Lab in Glasgow

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Scotland

text: Human


characteristic: External Id

text: Respiratory Virus Unit, Microbiology Services Colindale, Public Health England

text: public

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: England

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


COG-UK/NORT-YYFBSE

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYFBSE

text: COVID-19 Genomics UK Consortium

characteristic: collection date

text: not provided

text: not provided

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: not provided

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: COG-UK/NORT-YYFBSE

characteristic: title

text: not provided


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

text: not provided

text: not provided


COG-UK/NORT-YYRZWA

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYRZWA

text: COVID-19 Genomics UK Consortium

characteristic: collection date

text: not provided

text: not provided

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: not provided

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/NORT-YYRZWA

text: not provided

characteristic: virus identifier