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characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-HUG-36023281/2021


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: HUG

characteristic: INSDC last update

text: public

text: SIB

text: GENEVE MGD LABO, Geneva, Switzerland

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-HUG-36047369/2021

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HUG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SIB

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-HUG-36086039/2021

characteristic: isolate

characteristic: sample capture status

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: HUG

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-SNRCI-HUG-36054733/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HUG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-SNRCI-HUG-36078646/2021

characteristic: organism


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: HUG

characteristic: INSDC last update

text: public

text: SIB

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/ZH-HUG-36050413/2021

characteristic: isolate

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HUG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-SNRCI-HUG-36055027/2021


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

text: 54597:91ba9c65-4b8c-4611-90a4-43837823ed59

tag: Namespace:Max Planck Institute for Marine Microbiology

text: GFBIO

text: Microbial mat ontop of an asphalt flow sampled via a rotary drill

characteristic: description

text: marine cold seep biome [ENVO:01000127]

characteristic: environment (biome)

text: oil seep [ENVO:00002063]

characteristic: environment (feature)

text: microbial mat [ENVO:03000033]

characteristic: environment (material)

text: sediment

characteristic: environmental package

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Gulf of Mexico: Campeche Knolls, Chapopote asphalt volcano or Mictlan asphalt field

characteristic: geographic location (region and/or locality)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: organism

text: S-D-Bact-0341-b-S-17 / S-D-Bact-0785-a-A-21

characteristic: pcr primers

text: Hydrocarbons in the southern Gulf of Mexico; Project Acronym: NatHCSeepage; The project was benefited by the Deutsche Forschungsgesellschaft

characteristic: project name

characteristic: sample description

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Max Planck Institute for Marine Microbiology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54596:91ba9c65-4b8c-4611-90a4-43837823ed59

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

text: Solid asphalt sampled via gravity coring (surface layer)

characteristic: description

text: marine cold seep biome [ENVO:01000127]

characteristic: environment (biome)

text: oil seep [ENVO:00002063]

characteristic: environment (feature)

text: microbial mat [ENVO:01000008]

characteristic: environment (material)

text: sediment

characteristic: environmental package

text: Atlantic Ocean

text: mimarks-survey

text: sediment metagenome

text: sediment metagenome

text: sediment

text: Illumina MiSeq

text: true

text: 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: University of Tartu, Estonia

text: public

text: ena-upload-cli v0.3.1 @ Galaxy

tag: Namespace:University of Tartu, Estonia

text: University of Tartu KoroGenoEST3 consortium, Estonia

characteristic: collecting institution

text: Aare Abroi, Radko Avi, Taavi Päll, Heiki Niglas , Merit Pauskar, Arina Shablinskaja, Eveli Kallas, Andrio Lahesaare, Kai Truusalu, Dagmar Hoidmets, Olga Sadikova, Kaspar Ratnik, Hanna Sepp, Liidia Dotsenko, Jevgenia Epštein, Heleene Suija, Katrin Kaarna, Lili Milani, Mait Metspalu, Ott Eric Oopkaup, Ivar Koppel, Erik Jaaniso, Ivan Kuzmin, Uku Raudvere, Tuuli Reisberg, Hedi Peterson, Ulvi Gerst Talas, Paul Naaber, Mari-Anne Härma, Irja Lutsar, Kristi Huik

characteristic: collector name

text: Nasopharyngeal/oropharyngeal swab from Estonian Covid-19 patient

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

unit: year

characteristic: host age

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: host subject id

characteristic: host subject id

characteristic: isolate

characteristic: isolation source non-host-associated

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status

text: PCR tiled amplicon WGS of SARS-Cov-2, pre-selected subset from active surveillance


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Tartu, Estonia

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.3.1 @ Galaxy

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: Estonia

text: human

text: diseased

text: Homo sapiens

text: female

text: host subject id

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: University of Tartu, Estonia

text: public

text: ena-upload-cli v0.3.1 @ Galaxy

characteristic: collecting institution

characteristic: collector name

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: host subject id

characteristic: host subject id


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Tartu, Estonia

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.3.1 @ Galaxy

text: Estonia

text: human

text: healthy

text: Homo sapiens

text: female

text: host subject id

characteristic: isolate

characteristic: isolation source non-host-associated

characteristic: organism

characteristic: sample capture status


characteristic: ENA-FIRST-PUBLIC

text: University of Tartu, Estonia

text: public

text: ena-upload-cli v0.3.1 @ Galaxy

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

characteristic: description

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: human

characteristic: host common name

text: not provided

text: Homo sapiens

text: female

text: host subject id

text: active surveillance not initiated by an outbreak

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Tartu, Estonia

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.3.1 @ Galaxy

text: Estonia

text: human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: host subject id

characteristic: host subject id


characteristic: ENA-FIRST-PUBLIC

text: THE ROSLIN INSTITUTE

text: public

tag: Namespace:THE ROSLIN INSTITUTE

characteristic: Submitter Id

text: cattle

characteristic: common name

text: Samples derived from immune cells isolated from peripheral blood

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Bos taurus

characteristic: organism

text: Bos taurus

text: Female

characteristic: sex

text: Blood

characteristic: tissue type

text: Holstein Friesian 3457


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: THE ROSLIN INSTITUTE

characteristic: INSDC center name

text: public

text: cattle

text: Kenya

text: Bos taurus

text: Bos taurus

text: Female

text: Blood

text: N'dama 230

characteristic: title


text: THE ROSLIN INSTITUTE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zebu cattle

text: Brazil

text: Bos indicus

text: Bos indicus

text: Female

text: Blood

text: Nelore 2


characteristic: ENA-FIRST-PUBLIC

text: Institute of Food Safety, Animal Health and Environment BIOR

text: public

tag: Namespace:Institute of Food Safety, Animal Health and Environment "BIOR"

characteristic: collection date

text: Yersinia WGS

characteristic: isolate

text: Food

characteristic: isolation source

text: Yersinia enterocolitica

text: Yersinia enterocolitica


text: public

characteristic: Submitter Id

text: Yersinia WGS

characteristic: description

text: Food

text: Yersinia frederiksenii

text: Yersinia frederiksenii


text: public

text: Yersinia WGS

text: Food

text: Yersinia intermedia

characteristic: organism

text: Yersinia intermedia


text: public

text: Yersinia WGS

text: Food

text: Yersinia kristensenii

text: Yersinia kristensenii


text: Robert Koch Institut

text: public

tag: Namespace:Robert Koch Institut

text: not provided

text: Klebsiella pneumoniae isolate

text: Germany

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: N.A.

characteristic: host scientific name

text: N.A.

text: N.A.

text: N.A.

characteristic: lat lon

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: N.A.

characteristic: serovar

text: N.A.

characteristic: strain

text: Klebsiella pneumoniae isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:Laboratory of genomics and metagenomics, Institute of Microbiology, University Hospital Centre and University of Lausanne, Switzerland

text: SIB

characteristic: broker name

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collecting institution

text: Trestan Pillonel, Damien Jacot, Sébastien Aeby, Gilbert Greub, Claire Bertelli

characteristic: collector name

text: Switzerland

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN8327/2021

characteristic: sample capture status

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: Laboratory of genomics and metagenomics, Institute of Microbiology, University Hospital Centre and University of Lausanne, Switzerland

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN8300/2021

characteristic: isolate

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SIB

characteristic: broker name

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: VD

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN8288/2021


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

text: Switzerland

text: VD

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN8318/2021

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: public

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN8340/2021

characteristic: isolate

characteristic: organism


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: SIB

characteristic: broker name

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: VD

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN8286/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: public

characteristic: Submitter Id

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

text: Switzerland

text: VD

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN8333/2021

characteristic: sample capture status

characteristic: title