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text: Verena Kufner, Gabriela Ziltener, Maryam Zaheri, Stefan Schmutz, Annette Audigé, Maria Grünberg, Kevin Steiner, Jon Huder, Cyril Shah, Riccarda Capaul, Guido Bloemberg, Jürg Böni, Michael Huber, Alexandra Trkola

characteristic: collector name

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tag: attribute

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characteristic: ENA-CHECKLIST

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text: public

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text: Medica, Medizinische Laboratorien, Zürich, Switzerland

text: Verena Kufner, Gabriela Ziltener, Maryam Zaheri, Stefan Schmutz, Annette Audigé, Maria Grünberg, Kevin Steiner, Jon Huder, Cyril Shah, Riccarda Capaul, Guido Bloemberg, Jürg Böni, Michael Huber, Alexandra Trkola

text: Switzerland

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text: public

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characteristic: ENA-CHECKLIST

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text: Severe acute respiratory syndrome coronavirus 2


characteristic: ENA-LAST-UPDATE

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characteristic: INSDC last update

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characteristic: ENA-CHECKLIST

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text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba52194/2021


characteristic: ENA-CHECKLIST

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tag: Namespace:Institute for Infectious Diseases, Bern, Switzerland

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text: MCL Medizinische Laboratorien, Hauptstandort Niederwangen; Niederwangen, Switzerland

text: Nicole Liechti, Christian Baumann, Miguel A Terrazos Miani, Sonja Gempeler, Loïc Borcard, Stefan Neuenschwander, Cora Sägesser, Pascal Bittel, Peter Keller, Franziska Suter-Riniker, Stephen L Leib, Alban Ramette

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

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text: hCoV-19/Switzerland/BE-IFIK-3022-9731/2021

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characteristic: ENA-LAST-UPDATE

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text: Institute for Infectious Diseases, Bern, Switzerland

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text: public

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text: Inselspital Bern (Covid-Track); Bern, Switzerland

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text: Switzerland

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text: public

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text: Regionalspital Emmental AG Burgdorf, Labor; Burgdorf, Switzerland

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text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-3052-2091/2021


characteristic: ENA-LAST-UPDATE

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text: public

text: SIB

text: Inselspital Bern; Bern, Switzerland

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

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text: hCoV-19/Switzerland/BE-IFIK-3054-2131/2021

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characteristic: ENA-CHECKLIST

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text: public

tag: Namespace:Hopital du Valais, Institut Central des Hopitaux, Sion, Switzerland

text: SIB

text: Valais Hospital, Central Institute; Sion, Switzerland

text: Alexis Dumoulin, Lorenzo Cerutti, Cedric Howald, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VS

characteristic: geographic location (region and locality)

text: Human

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text: restricted access

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text: Homo sapiens

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text: hCoV-19/Switzerland/VS-ICH-2210919621/2021


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: Hopital du Valais, Institut Central des Hopitaux, Sion, Switzerland

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text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2210921232/2021

text: Severe acute respiratory syndrome coronavirus 2


characteristic: ENA-CHECKLIST

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characteristic: INSDC center name

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text: public

text: SIB

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

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characteristic: host sex

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text: hCoV-19/Switzerland/VD-ICH-2210921335/2021

characteristic: isolate

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text: active surveillance in response to outbreak

characteristic: sample capture status

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Tartu, Estonia

characteristic: INSDC last update

text: public

text: ena-upload-cli v0.3.1 @ Galaxy

tag: Namespace:University of Tartu, Estonia

text: University of Tartu KoroGenoEST3 consortium, Estonia

text: Aare Abroi, Radko Avi, Taavi Päll, Heiki Niglas , Merit Pauskar, Arina Shablinskaja, Eveli Kallas, Andrio Lahesaare, Kai Truusalu, Dagmar Hoidmets, Olga Sadikova, Kaspar Ratnik, Hanna Sepp, Liidia Dotsenko, Jevgenia Epštein, Heleene Suija, Katrin Kaarna, Lili Milani, Mait Metspalu, Ott Eric Oopkaup, Ivar Koppel, Erik Jaaniso, Ivan Kuzmin, Uku Raudvere, Tuuli Reisberg, Hedi Peterson, Ulvi Gerst Talas, Paul Naaber, Mari-Anne Härma, Irja Lutsar, Kristi Huik

characteristic: collector name

text: Nasopharyngeal/oropharyngeal swab from Estonian Covid-19 patient

characteristic: description

text: Estonia

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

unit: year

characteristic: host age

text: human

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text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

text: host subject id

characteristic: isolation source non-host-associated

text: PCR tiled amplicon WGS of SARS-Cov-2, pre-selected subset from active surveillance


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: University of Tartu, Estonia

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.3.1 @ Galaxy

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Estonia

text: human

text: diseased

text: Homo sapiens

text: male

characteristic: host sex

text: host subject id

characteristic: host subject id

characteristic: isolate


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Tartu, Estonia

characteristic: INSDC last update

text: public

text: ena-upload-cli v0.3.1 @ Galaxy

characteristic: collector name

characteristic: description

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

text: male

text: host subject id

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: University of Tartu, Estonia

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.3.1 @ Galaxy

characteristic: Submitter Id

characteristic: collecting institution

text: Estonia

text: human

characteristic: host common name

text: healthy

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text: Homo sapiens

characteristic: host scientific name

text: female

text: host subject id

characteristic: isolation source non-host-associated


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Tartu, Estonia

characteristic: INSDC last update

text: public

text: ena-upload-cli v0.3.1 @ Galaxy

characteristic: collection date

characteristic: collector name

characteristic: description

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human

text: not provided

text: Homo sapiens

text: female

characteristic: host sex

text: host subject id

characteristic: host subject id

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: MilliporeSigma

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: hiPSC

characteristic: cell line

text: induced pluripotent stem cell

characteristic: cell type

text: human

characteristic: common name

text: Protocols: SCC300, Passage 7 (Day 91): 54 Matrigel domes total => split into 3 cryovials (18 domes/vial) as technical replicates. SCC321 (Colon 87) Passage 16: Two 10-cm dishes with a total of 171 x 10 µL Matrigel domes => 57 domes per cryovial x 3 for technical replicates. Pellets were frozen at -80C Total RNA was isolated using column purification Poly-A selection was performed on bulk RNA and adapters were ligated for library preparation

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: induced pluripotent stem cell

characteristic: progenitor cell type

text: Homo sapiens

characteristic: title


E-MTAB-11026:SCC300 P-7

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MilliporeSigma

characteristic: INSDC last update

text: public

text: E-MTAB-11026:SCC300 P-7

text: ArrayExpress

text: differentiated colon cell

text: human

characteristic: description

text: organoid culture

characteristic: growth condition

text: Homo sapiens

text: Homo sapiens

text: induced pluripotent stem cell

text: Homo sapiens

text: SCC300 P-7


E-MTAB-11026:SCC321 P-16

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: MilliporeSigma

characteristic: INSDC center name

text: public

text: E-MTAB-11026:SCC321 P-16

text: ArrayExpress

text: colon epithelial cell

text: human

text: organoid culture

text: Homo sapiens

text: Homo sapiens

text: colon

characteristic: organism part

text: Homo sapiens

text: SCC321 P-16


E-MTAB-11053:Sample 1

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11053:Sample 1

tag: Namespace:Medizinische Klinik I Universitatsklinikum Erlangen

characteristic: Submitter Id

text: ArrayExpress

text: human

text: Protocols: 2 × 10^6 HT-29 cells were implanted into the flanks of Rag1−/− mice via subcutaneous injection. Tumor tissues were collected 20 day post injection. Total RNA was extracted using peqGOLD RNA Kit (732-2868, Peqlab) according to the manufacturer's protocol. Sequencing libraries were generated using NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) following the manufacturer’s recommendations and index codes were added to attribute sequences to each sample. PCR was performed with Phusion High-Fidelity DNA polymerase (New England Biolabs), Universal PCR primers and Index (X) Primer. PCR products were purified (AMPure XP system) and library quality was assessed on the Agilent Bioanalyzer 2100 system. The clustering of the index-coded samples was performed on a cBot Cluster Generation System using PE Cluster Kit cBot-HS (Illumina) according to the manufacturer’s instructions.

text: colorectal carcinoma

characteristic: disease

text: wild type genotype

characteristic: genotype

text: injected into Rag1 -/- mice

text: Homo sapiens

text: Homo sapiens

text: neoplasm

text: 20 days post injection

characteristic: sampling time point

text: Homo sapiens

text: Sample 1


E-MTAB-11053:Sample 2

text: Medizinische Klinik I Universitatsklinikum Erlangen

text: public

text: E-MTAB-11053:Sample 2

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: human

characteristic: common name

text: colorectal carcinoma

text: wild type genotype

text: injected into Rag1 -/- mice

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: neoplasm

text: 20 days post injection

text: Homo sapiens

text: Sample 2

characteristic: title


E-MTAB-11053:Sample 3

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

text: E-MTAB-11053:Sample 3

text: ArrayExpress

text: human

characteristic: description

text: colorectal carcinoma

text: injected into Rag1 -/- mice

characteristic: growth condition

text: Homo sapiens

text: Homo sapiens

text: neoplasm

text: 20 days post injection

text: Homo sapiens

text: Sample 3


E-MTAB-11053:Sample 4

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11053:Sample 4

text: ArrayExpress

text: human

text: colorectal carcinoma

text: injected into Rag1 -/- mice

text: Homo sapiens

text: Homo sapiens

text: neoplasm

characteristic: organism part

text: 20 days post injection

text: Homo sapiens

text: Sample 4


E-MTAB-11053:Sample 5

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11053:Sample 5

characteristic: Submitter Id

text: ArrayExpress

text: human

text: colorectal carcinoma

characteristic: disease

characteristic: genotype

text: injected into Rag1 -/- mice

text: Homo sapiens

text: Homo sapiens

text: neoplasm

text: 20 days post injection

text: Homo sapiens

text: Sample 5


E-MTAB-11053:Sample 6

text: public

text: E-MTAB-11053:Sample 6

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: human

characteristic: common name

text: colorectal carcinoma

text: injected into Rag1 -/- mice

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: neoplasm

text: 20 days post injection

characteristic: sampling time point

text: Homo sapiens

text: Sample 6


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

tag: Namespace:Public Health Authority of the Slovak Republic

text: Science Park of Comenius University of Bratislava

text: Public Health Authority of the Slovak Republic, Trnavská cesta 52, 826 45 Bratislava, Slovakia

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Slovakia

characteristic: geographic location (country and/or sea)

characteristic: host age

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host subject id

text: RNA

characteristic: isolate

text: Nasopharyngeal swab

characteristic: isolation source-host associated

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Public Health Authority of the Slovak Republic

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: broker name

text: not provided

characteristic: common name

text: Slovakia

text: Human

text: not provided

text: Homo sapiens

text: female

text: RNA

text: Nasopharyngeal swab

characteristic: organism


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Slovakia

characteristic: geographic location (country and/or sea)

characteristic: host age

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: RNA

text: Nasopharyngeal swab


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SC

text: Lighthouse Laboratory Plymouth

text: Samples prepared at Lighthouse Laboratory Plymouth by Lighthouse Laboratory Plymouth and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

characteristic: description

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: Human

characteristic: host scientific name

characteristic: sample capture status

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Lighthouse Lab in Glasgow

text: Samples prepared at Lighthouse Lab in Glasgow by Harper VanSteenhouse, Yumi Kasai, David Gray, Carol Clugston, Anna Dominiczak and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: England

text: Human

characteristic: organism


characteristic: ENA-CHECKLIST

text: SC

text: public

text: SC

text: Lighthouse Lab in Milton Keynes

characteristic: collecting institution

characteristic: collection date

text: Samples prepared at Lighthouse Lab in Milton Keynes by The Lighthouse Lab in Milton Keynes and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

text: Human


characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SC

text: Lighthouse Lab in Glasgow

characteristic: description

text: United Kingdom

text: Scotland

text: Human


text: SC

text: public

text: SC

text: Lighthouse Laboratory Plymouth

text: United Kingdom

text: Wales

characteristic: geographic location (region and locality)

text: Human

characteristic: host scientific name

characteristic: sample capture status

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SC

text: Health Services Laboratories

text: Samples prepared at Health Services Laboratories by Health Services Laboratories and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: England

text: Human


text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Health Services Laboratories

text: United Kingdom

text: Scotland

text: Human

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism


characteristic: ENA-CHECKLIST

text: SC

text: public

text: SC

characteristic: collecting institution

characteristic: collection date

text: Samples prepared at Berkshire and Surrey Pathology Services Lighthouse Laboratory by Berkshire and Surrey Pathology Services Lighthouse Laboratory and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

text: Human


characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SC

text: Berkshire and Surrey Pathology Services Lighthouse Laboratory

characteristic: description

text: United Kingdom

text: England

text: Human

text: active surveillance in response to outbreak


text: SC

text: public

text: SC

text: Lighthouse Lab in Milton Keynes

text: United Kingdom

text: Wales

characteristic: geographic location (region and locality)

text: Human

characteristic: host scientific name

characteristic: sample capture status

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SC

text: United Kingdom

text: Wales

text: Human


text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Lighthouse Lab in Alderley Park

text: Samples prepared at Lighthouse Lab in Alderley Park by Jacquelyn Wynn, Mairead Hyland, The Lighthouse Lab in Alderley Park and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: England

text: Human

characteristic: organism


characteristic: ENA-CHECKLIST

text: SC

text: public

text: SC

text: Lighthouse Lab in Alderley Park

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

text: Human


characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SC

text: Rosalind Franklin Laboratory

text: Samples prepared at Rosalind Franklin Laboratory by Donald Fraser, Suki Lee, Rob Howes, The Rosalind Franklin Laboratory and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

characteristic: description

text: United Kingdom

text: England

text: Human


text: SC

text: public

text: SC

text: Rosalind Franklin Laboratory

text: United Kingdom

text: Wales

characteristic: geographic location (region and locality)

text: Human

characteristic: host scientific name

characteristic: sample capture status

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SC

text: Lighthouse Lab in Glasgow

text: United Kingdom

text: Wales

text: Human


text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Integrated Covid Hub North East

text: Samples prepared at Integrated Covid Hub North East by Integrated Covid Hub North East and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

text: United Kingdom

text: England

text: Human

characteristic: organism


characteristic: ENA-CHECKLIST

text: SC

text: public

text: SC

text: Integrated Covid Hub North East

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Scotland

text: Human


characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SC

text: Lighthouse Lab in Glasgow

characteristic: description

text: United Kingdom

text: England

text: Human


text: SC

text: public

text: SC

text: Lighthouse Lab in Milton Keynes

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: Human

characteristic: host scientific name

characteristic: sample capture status

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SC

text: Lighthouse Lab in Glasgow

text: United Kingdom

text: Scotland

text: Human


text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Integrated Covid Hub North East

text: United Kingdom

text: Wales

text: Human

characteristic: organism


characteristic: ENA-CHECKLIST

text: SC

text: public

text: SC

text: Lighthouse Laboratory Plymouth

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

text: Human


characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SC

text: Health Services Laboratories

characteristic: description

text: United Kingdom

text: England

text: Human


text: SC

text: public

text: SC

text: Lighthouse Lab in Alderley Park

text: United Kingdom

text: Northern Ireland

characteristic: geographic location (region and locality)

text: Human

characteristic: host scientific name

characteristic: sample capture status

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SC

text: Integrated Covid Hub North East

text: United Kingdom

text: Northern Ireland

text: Human


text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SC

characteristic: broker name

text: United Kingdom

text: England

text: Human

characteristic: organism


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run31.....Blank..Blank.515Y.926R.a.fastq

tag: Namespace:UNIVERSITY OF SOUTHERN CALIFORNIA

text: no template control PCR blank

text: unidentified

text: unidentified


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run31.....Blank..Blank.515Y.926R.b.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC center name

text: public

text: Run31.....Blank..Blank.515Y.926R.c.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

characteristic: INSDC first public

text: public

text: Run31.....Blank..Blank.515Y.926R.d.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run31.....Lab..EvenMockV1.515Y.926R.a.fastq

text: mock communitiy

characteristic: description

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run31.....Lab..EvenMockV1.515Y.926R.b.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run31.....Lab..EvenMockV1.515Y.926R.c.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run31.....Lab..EvenMockV1.515Y.926R.d.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run31.....Lab..StaggeredMockV1.515Y.926R.a.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run31.....Lab..StaggeredMockV1.515Y.926R.b.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run31.....Lab..StaggeredMockV1.515Y.926R.c.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run31.....Lab..StaggeredMockV1.515Y.926R.d.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run40.....Blank..Blank.515Y.926R.a.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run40.....Blank..Blank.515Y.926R.b.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run46.....Blank..Blank.515Y.926R.a.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run46.....Blank..Blank.515Y.926R.b.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run46.....Blank..Blank.515Y.926R.c.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run46.....Blank..Blank.515Y.926R.d.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run46.....Blank..Blank.515Y.926R.e.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run46.....Blank..Blank.515Y.926R.f.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run46.....Blank..Blank.515Y.926R.g.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run46.....Blank..Blank.515Y.926R.h.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run46.....Blank..Blank.515Y.926R.i.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run46.....Blank..Blank.515Y.926R.j.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run46.....Blank..Blank.515Y.926R.k.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run46.....Blank..Blank.515Y.926R.L.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run46.....Blank..Blank.515Y.926R.m.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run46.....Blank..Blank.515Y.926R.n.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run46.....Blank..Blank.515Y.926R.o.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run46.....Blank..Blank.515Y.926R.p.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run46.....Lab..16sEvenMock18sEvenMock.515Y.926R.b.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run46.....Lab..16sStagMock18sStagMock.515Y.926R.b.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run46.....Lab..EvenMock18s.515Y.926R.b.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run46.....Lab..EvenMockV2.515Y.926R.b.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run46.....Lab..StaggeredMock18s.515Y.926R.b.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run46.....Lab..StaggeredMockV2.515Y.926R.b.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run47.....Blank..Blank.515Y.926R.a.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run47.....Blank..Blank.515Y.926R.b.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run47.....Blank..Blank.515Y.926R.c.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run47.....Blank..Blank.515Y.926R.d.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run47.....Blank..Blank.515Y.926R.e.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run47.....Blank..Blank.515Y.926R.f.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run47.....Blank..Blank.515Y.926R.g.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run47.....Blank..Blank.515Y.926R.h.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run47.....Blank..Blank.515Y.926R.i.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run47.....Blank..Blank.515Y.926R.j.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run47.....Blank..Blank.515Y.926R.k.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run47.....Blank..Blank.515Y.926R.l.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run47.....Blank..Blank.515Y.926R.m.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run53.....Blank..Blank.515Y.926R.a.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run53.....Blank..Blank.515Y.926R.b.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run53.....Blank..Blank.515Y.926R.c.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run53.....Blank..Blank.515Y.926R.d.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run53.....Blank..Blank.515Y.926R.e.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run53.....Blank..Blank.515Y.926R.f.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run53.....Blank..Blank.515Y.926R.g.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run53.....Blank..Blank.515Y.926R.h.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run53.....Blank..Blank.515Y.926R.i.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run53.....Lab..EvenMockV2.515Y.926R.a.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run53.....Lab..StaggeredMockV2.515Y.926R.a.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run55.....Blank..Blank.515Y.926R.a.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run55.....Blank..Blank.515Y.926R.b.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run55.....Blank..Blank.515Y.926R.c.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run55.....Blank..Blank.515Y.926R.d.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run55.....Blank..Blank.515Y.926R.e.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run55.....Blank..Blank.515Y.926R.f.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run55.....Blank..Blank.515Y.926R.g.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run55.....Blank..Blank.515Y.926R.h.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run55.....Blank..Blank.515Y.926R.i.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run55.....Blank..Blank.515Y.926R.j.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run55.....Blank..Blank.515Y.926R.k.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run55.....Blank..Blank.515Y.926R.l.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run55.....Blank..Blank.515Y.926R.m.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run55.....Blank..Blank.515Y.926R.n.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run55.....Blank..Blank.515Y.926R.o.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run55.....Lab..EvenMockV2.515Y.926R.a.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run55.....Lab..StaggeredMockV2.515Y.926R.a.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run56Lane1.....Blank..Blank.515Y.926R.a.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run56Lane1.....Blank..Blank.515Y.926R.b.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run56Lane1.....Blank..Blank.515Y.926R.c.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run56Lane1.....Blank..Blank.515Y.926R.d.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run56Lane1.....Blank..Blank.515Y.926R.e.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run56Lane1.....Blank..Blank.515Y.926R.f.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run56Lane1.....Lab..EvenMockV2.515Y.926R.a.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run56Lane1.....Lab..StaggeredMockV2.515Y.926R.a.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run56Lane2.....Blank..Blank.515Y.926R.a.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run56Lane2.....Blank..Blank.515Y.926R.b.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run56Lane2.....Blank..Blank.515Y.926R.c.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run56Lane2.....Blank..Blank.515Y.926R.d.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run56Lane2.....Blank..Blank.515Y.926R.e.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run56Lane2.....Lab..EvenMockV2.515Y.926R.a.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run56Lane2.....Lab..StaggeredMockV2.515Y.926R.a.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run58Lane1.....Blank..Blank.515Y.926R.a.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run58Lane1.....Blank..Blank.515Y.926R.b.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run58Lane1.....Blank..Blank.515Y.926R.c.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run58Lane1.....Blank..Blank.515Y.926R.d.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run58Lane1.....Blank..Blank.515Y.926R.e.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run58Lane1.....Lab..EvenMockV2.515Y.926R.a.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run58Lane1.....Lab..StaggeredMockV2.515Y.926R.a.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run58Lane2.....Blank..Blank.515Y.926R.a.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run58Lane2.....Blank..Blank.515Y.926R.b.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run58Lane2.....Blank..Blank.515Y.926R.c.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run58Lane2.....Blank..Blank.515Y.926R.d.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run58Lane2.....Blank..Blank.515Y.926R.e.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run58Lane2.....Blank..Blank.515Y.926R.f.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run58Lane2.....Blank..Blank.515Y.926R.g.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run58Lane2.....Blank..Blank.515Y.926R.h.fastq

text: no template control PCR blank

text: unidentified

text: unidentified


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run58Lane2.....Lab..EvenMockV2.515Y.926R.a.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


text: UNIVERSITY OF SOUTHERN CALIFORNIA

text: public

text: Run58Lane2.....Lab..StaggeredMockV2.515Y.926R.a.fastq

text: mock communitiy

text: synthetic metagenome

text: synthetic metagenome


Common dandelion

text: Keygene N.V.

text: public

text: Common dandelion

tag: Namespace:Keygene N.V.

text: Common dandelion

text: Taraxacum officinale

text: Taraxacum officinale

text: Common dandelion


text: SC

text: public

text: SC

text: Lighthouse Lab in Alderley Park

characteristic: collecting institution

characteristic: collection date

text: Samples prepared at Lighthouse Lab in Alderley Park by Jacquelyn Wynn, Mairead Hyland, The Lighthouse Lab in Alderley Park and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: Human

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak


characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: SC

text: Lighthouse Lab in Milton Keynes

text: Samples prepared at Lighthouse Lab in Milton Keynes by The Lighthouse Lab in Milton Keynes and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: England

text: Human

characteristic: host scientific name

characteristic: sample capture status

characteristic: title


characteristic: External Id

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SC

text: Samples prepared at Berkshire and Surrey Pathology Services Lighthouse Laboratory by Berkshire and Surrey Pathology Services Lighthouse Laboratory and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

text: United Kingdom

text: England

text: Human


characteristic: ENA-CHECKLIST

text: SC

text: public

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Lighthouse Laboratory Plymouth

text: Samples prepared at Lighthouse Laboratory Plymouth by Lighthouse Laboratory Plymouth and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: England

text: Human

characteristic: organism


characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SC

text: Lighthouse Lab in Glasgow

text: Samples prepared at Lighthouse Lab in Glasgow by Harper VanSteenhouse, Yumi Kasai, David Gray, Carol Clugston, Anna Dominiczak and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

characteristic: description

text: United Kingdom

text: Scotland

text: Human


text: SC

text: public

text: SC

text: Lighthouse Lab in Glasgow

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: Human


characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: SC

text: Integrated Covid Hub North East

text: Samples prepared at Integrated Covid Hub North East by Integrated Covid Hub North East and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

text: United Kingdom

text: England

text: Human

characteristic: host scientific name

characteristic: sample capture status

characteristic: title


characteristic: External Id

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SC

text: Rosalind Franklin Laboratory

text: Samples prepared at Rosalind Franklin Laboratory by Donald Fraser, Suki Lee, Rob Howes, The Rosalind Franklin Laboratory and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

text: United Kingdom

text: England

text: Human


characteristic: ENA-CHECKLIST

text: SC

text: public

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Integrated Covid Hub North East

text: United Kingdom

text: Wales

text: Human

characteristic: organism


characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SC

text: Berkshire and Surrey Pathology Services Lighthouse Laboratory

characteristic: description

text: United Kingdom

text: England

text: Human


text: SC

text: public

text: SC

text: Lighthouse Lab in Alderley Park

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

characteristic: geographic location (region and locality)

text: Human


characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: SC

text: Health Services Laboratories

text: Samples prepared at Health Services Laboratories by Health Services Laboratories and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: England

text: Human

characteristic: host scientific name

characteristic: sample capture status

characteristic: title


text: Instituto Nacional de Saude Doutor Ricardo Jorge I.P. (INSA)

characteristic: CENTER NAME

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE

characteristic: TITLE

text: not provided

text: not provided

characteristic: collector name

characteristic: common name

text: Portugal

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: not provided

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Portugal

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

characteristic: organism


text: mouse

characteristic: ArrayExpress-Species

characteristic: External Id

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: house mouse

characteristic: common name

text: Mus musculus

text: Mus musculus

characteristic: title


text: mouse

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: house mouse

text: Mus musculus

text: Mus musculus

characteristic: subject id


characteristic: ENA-LAST-UPDATE

text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: Mara Lawniczak

characteristic: collected by

text: SANGER INSTITUTE

text: United Kingdom

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: England | Saffron Walden

characteristic: geographic location (region and locality)

text: NOT COLLECTED

characteristic: habitat

text: adult

characteristic: lifestage

text: Physella acuta

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

text: Physella acuta

text: NOT COLLECTED

characteristic: sex

characteristic: specimen id

text: 91b3c19e-9149-4ebe-b8d3-925975456cff-DTOL-specimen

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COPO

text: Mara Lawniczak

text: SANGER INSTITUTE

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: England | Saffron Walden

text: NOT COLLECTED

text: adult

text: Physella acuta

characteristic: organism

text: WHOLE ORGANISM

text: DTOL

text: Physella acuta

text: NOT COLLECTED

text: 461b552d-5575-4386-9f77-932432014326-DTOL-specimen

characteristic: title


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: Mara Lawniczak

characteristic: collected by

text: SANGER INSTITUTE

text: United Kingdom

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: England | Saffron Walden

characteristic: geographic location (region and locality)

text: NOT COLLECTED

characteristic: habitat

text: adult

characteristic: lifestage

text: Physella acuta

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

text: Physella acuta

text: NOT COLLECTED

text: 0d082a51-5319-40c8-9697-7d89d2b3ba8c-DTOL-specimen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COPO

text: Mara Lawniczak

text: SANGER INSTITUTE

characteristic: collecting institution

text: United Kingdom

text: not collected

text: not collected

text: England | Saffron Walden

text: NOT COLLECTED

text: adult

text: Physella acuta

text: WHOLE ORGANISM

text: DTOL

characteristic: project name

text: Physella acuta

text: NOT COLLECTED

characteristic: sex

characteristic: specimen id

text: c456ee20-7de5-41d6-a944-d8830a72ed8b-DTOL-specimen

characteristic: tolid


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: Mara Lawniczak

characteristic: collected by

text: SANGER INSTITUTE

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: England | Saffron Walden

text: NOT COLLECTED

text: adult

text: Physella acuta

characteristic: organism

text: WHOLE ORGANISM

text: DTOL

text: Physella acuta

text: NOT COLLECTED

text: ef0074de-6716-4baa-92de-5203f0a96606-DTOL-specimen

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COPO

text: Mara Lawniczak

text: SANGER INSTITUTE

characteristic: collecting institution

text: United Kingdom

text: not collected

text: not collected

text: England | Saffron Walden

characteristic: geographic location (region and locality)

text: NOT COLLECTED

characteristic: habitat

text: adult

characteristic: lifestage

text: Physella acuta

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

text: Physella acuta

text: NOT COLLECTED

text: d8bb2082-2989-4029-9c3b-35691b1aa2f8-DTOL-specimen


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: Mara Lawniczak

characteristic: collected by

text: SANGER INSTITUTE

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: England | Saffron Walden

text: NOT COLLECTED

text: adult

text: Physella acuta

text: WHOLE ORGANISM

text: DTOL

characteristic: project name

text: Physella acuta

text: NOT COLLECTED

characteristic: sex

characteristic: specimen id

text: 3411ec3d-db73-406e-94e4-4d117cfcf6e4-DTOL-specimen

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COPO

text: Mara Lawniczak

text: SANGER INSTITUTE

characteristic: collecting institution

text: United Kingdom

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: England | Saffron Walden

text: NOT COLLECTED

text: adult

text: Physella acuta

characteristic: organism

text: WHOLE ORGANISM

text: DTOL

text: Physella acuta

text: NOT COLLECTED

text: c387128d-e91d-488b-8d86-a7a44182e6be-DTOL-specimen

characteristic: title


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: Mara Lawniczak

characteristic: collected by

text: SANGER INSTITUTE

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: England | Saffron Walden

characteristic: geographic location (region and locality)

text: NOT COLLECTED

characteristic: habitat

text: adult

characteristic: lifestage

text: Physella acuta

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

text: Physella acuta

text: NOT COLLECTED

text: 9ff9b651-5416-4c3a-abf1-392042c5486c-DTOL-specimen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COPO

text: Mara Lawniczak

text: SANGER INSTITUTE

characteristic: collecting institution

text: United Kingdom

text: not collected

text: not collected

text: England | Saffron Walden

text: NOT COLLECTED

text: adult

text: Physella acuta

text: WHOLE ORGANISM

text: DTOL

characteristic: project name

text: Physella acuta

text: NOT COLLECTED

characteristic: sex

characteristic: specimen id

text: 23f93d51-ec15-46e7-a553-8359336e6104-DTOL-specimen

characteristic: tolid


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: Mara Lawniczak

characteristic: collected by

text: SANGER INSTITUTE

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: England | Saffron Walden

text: NOT COLLECTED

text: adult

text: Physella acuta

characteristic: organism

text: WHOLE ORGANISM

text: DTOL

text: Physella acuta

text: NOT COLLECTED

text: eea27d18-7752-42df-b8d9-c8ad32075880-DTOL-specimen

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COPO

text: Mara Lawniczak

text: SANGER INSTITUTE

characteristic: collecting institution

text: United Kingdom

text: not collected

text: not collected

text: England | Saffron Walden

characteristic: geographic location (region and locality)

text: NOT COLLECTED

characteristic: habitat

text: adult

characteristic: lifestage

text: Physella acuta

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

text: Physella acuta

text: NOT COLLECTED

text: 31da3b95-1557-4da4-9b51-07c428b40e14-DTOL-specimen


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: Mara Lawniczak

characteristic: collected by

text: SANGER INSTITUTE

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: England | Saffron Walden

text: NOT COLLECTED

text: adult

text: Physella acuta

text: WHOLE ORGANISM

text: DTOL

characteristic: project name

text: Physella acuta

text: NOT COLLECTED

characteristic: sex

characteristic: specimen id

text: f5e3f2f3-7a87-4508-a530-8cde032cba9a-DTOL-specimen

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COPO

text: Mara Lawniczak

text: SANGER INSTITUTE

characteristic: collecting institution

text: United Kingdom

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: England | Saffron Walden

text: NOT COLLECTED

text: adult

text: Physella acuta

characteristic: organism

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characteristic: title


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text: EarlhamInstitute

characteristic: INSDC center name

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text: public

characteristic: Submitter Id

text: COPO

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text: Mara Lawniczak

characteristic: collected by

text: SANGER INSTITUTE

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: England | Saffron Walden

characteristic: geographic location (region and locality)

text: NOT COLLECTED

characteristic: habitat

text: adult

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characteristic: ENA-CHECKLIST

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characteristic: INSDC status

characteristic: SRA accession

text: COPO

text: United Kingdom

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text: not collected

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text: United Kingdom

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characteristic: geographic location (latitude)

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characteristic: INSDC status

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characteristic: ENA-CHECKLIST

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