characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S21IRL00237985/2021

characteristic: title

characteristic: virus identifier


status: PUBLIC

tag: attribute

text: NVRL

text: public

characteristic: INSDC status

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

unit: DD

text: Europe / Ireland / Wicklow

characteristic: geographic location (region and locality)

unit: years

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: hCoV-19/Ireland/WW-NVRL-S21IRL00237465/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

tag: Namespace:INSTITUTE OF APPLIED BIOSCIENCES - CERTH

characteristic: Submitter Id

text: GENERAL HOSPITAL OF KAVALA

characteristic: collection date

text: not provided

text: Greece

characteristic: geographic location (country and/or sea)

text: Kavala

text: human

text: not provided

text: Homo sapiens

text: female

text: RNA

characteristic: organism

characteristic: title


text: INSTITUTE OF APPLIED BIOSCIENCES - CERTH

text: public

characteristic: INSDC status

text: GENERAL HOSPITAL OF KAVALA

characteristic: collecting institution

text: not provided

characteristic: collector name

characteristic: common name

characteristic: description

text: Greece

text: Kavala

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

characteristic: host subject id

text: RNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: GENERAL HOSPITAL OF KAVALA

text: not provided

text: Greece

text: Kavala

text: human

text: not provided

text: Homo sapiens

text: female

text: RNA

characteristic: isolate

characteristic: sample capture status


text: public

characteristic: INSDC status

characteristic: Submitter Id

text: General Hospital of Halkidiki

characteristic: collecting institution

text: not provided

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

characteristic: description

text: Greece

characteristic: geographic location (country and/or sea)

text: Chalkidiki

text: human

text: not provided

text: Homo sapiens

text: female

text: RNA

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Institute of Applied Biosciences, Centre for Research and Technology Hellas

text: not provided

text: Greece

text: Komotini

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host subject id

text: RNA


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: not provided

characteristic: collection date

text: not provided

text: Greece

text: Xanthi

text: human

text: not provided

text: Homo sapiens

text: not provided

text: RNA

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: General Hospital of Serres

text: not provided

characteristic: collector name

characteristic: common name

characteristic: description

text: Greece

characteristic: geographic location (country and/or sea)

text: Serres

text: human

text: not provided

text: Homo sapiens

text: male

text: RNA

characteristic: organism

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: General Hospital of Serres

text: not provided

text: Greece

text: Serres

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host subject id

text: RNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: GENERAL HOSPITAL OF KATERINI

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Greece

text: Katerini

text: human

text: not provided

text: Homo sapiens

text: female

text: RNA

characteristic: isolate

characteristic: sample capture status


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: GENERAL HOSPITAL OF KATERINI

text: not provided

characteristic: collector name

characteristic: common name

characteristic: description

text: Greece

characteristic: geographic location (country and/or sea)

text: Katerini

text: human

text: not provided

text: Homo sapiens

text: male

text: RNA

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Department of Microbiology, Papanikolaou General Hospital of Thessaloniki

text: not provided

text: Greece

text: Thessaloniki

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

characteristic: host subject id

text: RNA


characteristic: INSDC center name

characteristic: INSDC first public

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Greece

text: Thessaloniki

text: human

text: not provided

text: Homo sapiens

text: female

text: RNA

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: General Hospital of Goumenissa

text: not provided

text: not provided

characteristic: collector name

characteristic: common name

characteristic: description

text: Greece

characteristic: geographic location (country and/or sea)

text: Kilkis

text: human

text: not provided

text: Homo sapiens

text: not provided

text: RNA

characteristic: organism

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: General Hospital of Goumenissa

text: not provided

text: Greece

text: Kilkis

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host subject id

text: RNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: AHEPA HOSPITAL

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Greece

text: Thessaloniki

text: human

text: not provided

text: Homo sapiens

text: male

text: RNA

characteristic: isolate

characteristic: sample capture status


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: AHEPA HOSPITAL

text: not provided

characteristic: collector name

characteristic: common name

characteristic: description

text: Greece

characteristic: geographic location (country and/or sea)

text: Thessaloniki

text: human

text: not provided

text: Homo sapiens

text: female

text: RNA

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: AHEPA HOSPITAL

text: not provided

text: Greece

text: Kilkis

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host subject id

text: RNA


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: AHEPA HOSPITAL

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Greece

text: Chalkidiki

text: human

text: not provided

text: Homo sapiens

text: female

text: RNA

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Laboratory of Molecular Biology, Mamatsio General Hospital of Kozani

text: not provided

characteristic: collector name

characteristic: common name

characteristic: description

text: Greece

characteristic: geographic location (country and/or sea)

text: Florina

text: human

text: not provided

text: Homo sapiens

text: male

text: RNA

characteristic: organism

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: Greece

text: Ptolemaida

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

characteristic: host subject id

text: RNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Greece

text: Kozani

text: human

text: not provided

text: Homo sapiens

text: female

text: RNA

characteristic: isolate

characteristic: sample capture status


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

characteristic: collector name

characteristic: common name

characteristic: description

text: Greece

characteristic: geographic location (country and/or sea)

text: Kozani

text: human

text: not provided

text: Homo sapiens

text: male

text: RNA

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: not provided

text: Greece

text: Aridea

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

characteristic: host subject id

text: RNA


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Greece

text: Kastoria

text: human

text: not provided

text: Homo sapiens

text: male

text: RNA

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: not provided

characteristic: collector name

characteristic: common name

characteristic: description

text: Greece

characteristic: geographic location (country and/or sea)

text: Veria

text: human

text: not provided

text: Homo sapiens

text: female

text: RNA

characteristic: organism

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Papageorgiou, general hospital of Thessaloniki

text: not provided

text: Greece

text: Thessaloniki

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host subject id

text: RNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Greece

text: Thessaloniki

text: human

text: not provided

text: Homo sapiens

text: male

text: RNA

characteristic: isolate

characteristic: sample capture status


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: not provided

characteristic: collector name

characteristic: common name

characteristic: description

text: Greece

characteristic: geographic location (country and/or sea)

text: Thessaloniki

text: human

text: not provided

text: Homo sapiens

text: not provided

text: RNA

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Theageneio Hospital of Thessaloniki

text: not provided

text: not provided

text: Greece

text: Thessaloniki

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

characteristic: host subject id

text: RNA


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: G.Gennimatas, general hospital of Thessaloniki

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Greece

text: Thessaloniki

text: human

text: not provided

text: Homo sapiens

text: male

text: RNA

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: not provided

characteristic: collector name

characteristic: common name

characteristic: description

text: Greece

characteristic: geographic location (country and/or sea)

text: Thessaloniki

text: human

text: not provided

text: Homo sapiens

text: female

text: RNA

characteristic: organism

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: Greece

text: Thessaloniki

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

characteristic: host subject id

text: RNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Ippokrateio general hospital of Thessaloniki

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Greece

text: Thessaloniki

text: human

text: not provided

text: Homo sapiens

text: female

text: RNA

characteristic: isolate

characteristic: sample capture status


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

characteristic: collector name

characteristic: common name

characteristic: description

text: Greece

characteristic: geographic location (country and/or sea)

text: Thessaloniki

text: human

text: not provided

text: Homo sapiens

text: male

text: RNA

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: East Malling Research

text: public

tag: Namespace:East Malling Research

text: This study shows that the diversity of fungal and bacterial endophytes in apple trees is influenced by site and tree genotype and associated with susceptibility to Neonectria ditissima

text: Leaf

characteristic: environment (biome)

text: Apple orchard

characteristic: environment (feature)

text: Leaf

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: endophyte metagenome

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: endophyte metagenome

text: Illumina MiSeq V3

characteristic: sequencing method

text: Fungal and bacterial endophytes in apple trees


text: SHAANXI NORMAL UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:SHAANXI NORMAL UNIVERSITY

characteristic: Submitter Id

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: Line 1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SHAANXI NORMAL UNIVERSITY

text: public

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: title


text: Infravec

text: public

text: mosquitos

text: We hypothesise that up-regulation of detoxifying enzymes that degrade pyrethroids might confer negative-cross resistance, making malathion more toxic to pyrethroid-resistant mosquitoes. By means of RNA sequencing (RNA-Seq) we aim to investigate differential gene expression between resistant and susceptible mosquito populations. To test our hypothesis we are addressing the following two specific research aims: 1) To characterise the gene expression profiles of phenotyped An. coluzzii field populations with focus on cytochrome P450s and 2) to test if genes differentially expressed between insecticide resistance phenotypes are induced upon insecticide exposure or if they are constitutively over-expressed. In addition to the survivors of the 10x diagnostic pyrethroid concentration and the 0.5x diagnostic concentration of malathion we will also sequence the RNA of field samples that were unexposed to insecticide. The An. coluzzii laboratory strain N’Gousso will serve as the insecticide-susceptible control. We will subject control samples with the same experimental conditions as for the pyrethroid-resistant field population to RNA-Seq, meaning exposed to both insecticides at sublethal concentrations and unexposed specimens.

characteristic: description

characteristic: infravec request number

text: Anopheles coluzzii

text: Anopheles coluzzii

characteristic: study accession

text: Identification of new candidates for metabolic insecticide detoxification through RNA sequencing of negative-cross resistant mosquito field populations


text: public

tag: Namespace:SEOUL NATIONAL UNIVERSITY COLLEGE OF MEDICINE

text: human

text: Homo sapiens

text: Homo sapiens


text: SEOUL NATIONAL UNIVERSITY COLLEGE OF MEDICINE

text: public

text: human

text: Homo sapiens

text: Homo sapiens


text: UNIVERSITY OF COPENHAGEN

text: public

tag: Namespace:UNIVERSITY OF COPENHAGEN

text: University of La Laguna

text: True's beaked whale

text: Canary Islands

characteristic: geographic location (region and locality)

text: North Atlantic

characteristic: ocean

text: Mesoplodon mirus

text: Mesoplodon mirus

text: male

characteristic: sex

text: Skin sample from Mesoplodon mirus


text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: IZIKO

text: True's beaked whale

text: Buffels Bay, Cape Point, South Africa

text: Southern Hemisphere

text: Mesoplodon mirus

text: Mesoplodon mirus

text: female

text: Skin sample from Mesoplodon eueu


text: UNIVERSITY OF COPENHAGEN

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: IZIKO

text: True's beaked whale

text: Tabak Bay, Saldanha, South Africa

text: Southern Hemisphere

text: Mesoplodon mirus

text: Mesoplodon mirus

text: male

text: Skin sample from Mesoplodon eueu


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF COPENHAGEN

text: public

text: IZIKO

text: True's beaked whale

characteristic: common name

text: Grotto Beach, Hermanus, South Africa

text: Southern Hemisphere

text: Mesoplodon mirus

text: Mesoplodon mirus

text: female

text: Skin sample from Mesoplodon eueu


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

text: public

text: University County Cork

text: True's beaked whale

text: Ireland

text: North Atlantic

text: Mesoplodon mirus

characteristic: organism

text: Mesoplodon mirus

text: female

text: Skin sample from Mesoplodon mirus


text: UNIVERSITY OF COPENHAGEN

text: public

text: New Zealand Cetacean Tissue Archive

text: True's beaked whale

text: New Zealand

text: Southern Hemisphere

text: Mesoplodon mirus

text: Mesoplodon mirus

text: female

text: Skin sample from Mesoplodon eueu

characteristic: title


text: UNIVERSITY OF COPENHAGEN

text: public

text: Okeanos � Instituto de Investiga��o em Ci�ncias do Mar & IMAR � Instituto do MAR

text: True's beaked whale

text: Azores, Portugal

text: North Atlantic

text: Mesoplodon mirus

text: Mesoplodon mirus

text: male

text: Skin sample from Mesoplodon mirus


text: UNIVERSITY OF COPENHAGEN

text: public

text: IZIKO

text: True's beaked whale

text: 20 km N Dwarskwersbos, St Helena Bay, South Africa

text: Southern Hemisphere

text: Mesoplodon mirus

text: Mesoplodon mirus

text: female

text: Skin sample from Mesoplodon eueu


text: UNIVERSITY OF COPENHAGEN

text: public

text: NOAA via IZIKO

text: True's beaked whale

text: South Africa

text: Southern Hemisphere

text: Mesoplodon mirus

text: Mesoplodon mirus

text: female

text: DNA extract from Mesoplodon eueu


text: UNIVERSITY OF COPENHAGEN

text: public

text: NOAA via Karen Evans, CSIRO

text: True's beaked whale

text: Tasmania, Australia

text: Southern Hemisphere

text: Mesoplodon mirus

text: Mesoplodon mirus

text: female

text: Skin sample from Mesoplodon eueu


text: UNIVERSITY OF COPENHAGEN

text: public

text: Port Elizabeth Museum

text: True's beaked whale

text: South Africa

text: Southern Hemisphere

text: Mesoplodon mirus

text: Mesoplodon mirus

text: male

text: Skin sample from Mesoplodon eueu


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Kilkenny

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status

text: hCoV-19/Ireland/KK-NVRL-tM36IRL75399/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

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text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

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text: Europe / Ireland / Carlow

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characteristic: title


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text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

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text: Europe / Ireland / Cork

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characteristic: title


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text: Europe / Ireland / Offaly

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characteristic: title


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text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

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text: Europe / Ireland / Laois

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characteristic: title


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text: Europe / Ireland / Donegal

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characteristic: title


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characteristic: title


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text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

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text: Europe / Ireland / Sligo

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characteristic: title


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text: Europe / Ireland / Carlow

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characteristic: geographic location (region and locality)

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characteristic: title


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text: Europe / Ireland / Cork

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characteristic: title


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text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

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characteristic: title


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