E-MTAB-10475:Sample 32

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10475:Sample 32

text: ArrayExpress

text: macrophage

text: human

text: Yersinia enterocolitica WAC

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 32

characteristic: title


E-MTAB-10475:Sample 33

status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10475:Sample 33

tag: Namespace:Institute of Medical Microbiology, Virology and Hygiene, University Medical Center Hamburg-Eppendorf (UKE)

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: macrophage

characteristic: cell type

text: human

characteristic: common name

text: Protocols: Human peripheral blood monocytes were isolated by centrifugation of heparinized blood in Ficoll. Monocytic cells were isolated with magnetic anti-CD14 antibody beads and an MS+ Separation Column (Miltenyi Biotec) according to the manufacturer’s instructions and seeded into 6-well plates at a density of 2 × 106 cells. Cells were cultured in RPMI containing 20% autologous serum at 37°C, 5% CO2, and 90% humidity. The medium was changed every three days until cells were differentiated into macrophages after 7 days. Macrophages were used for infection 1-2 weeks after the isolation For the ChIP with formaldehyde crosslinking, macrophages (~3-10 x 106 cells per condition) were washed once with warm PBS and incubated for 30 min at 37 °C with accutase (eBioscience, USA) to detach the cells. ChIP protocol steps were performed as described in (Günther et al., 2016, PMID: 26855283), except that BSA-blocked ChIP grade protein A/G magnetic beads (Thermo Fisher Scientific, USA) were added to the chromatin and antibody mixture and incubated for 2 h at 4 °C rotating to bind chromatin-antibody complexes. Samples were incubated for ~3 min with a magnetic stand to ensure attachment of beads to the magnet and mixed by pipetting during the wash steps. ChIP-seq libraries were constructed with 1-10 ng of ChIP DNA or input control as a starting material. Libraries were generated using the NEXTflex™ ChIP-Seq Kit (Bioo Scientific, USA) as per manufacturer’s recommendations. Concentrations of all samples were measured with a Qubit Fluorometer (Thermo Fisher Scientific, USA) and fragment length distribution of the final libraries was analysed with the DNA High Sensitivity Chip on an Agilent 2100 Bioanalyzer (Agilent Technologies, USA).

characteristic: description

text: Yersinia enterocolitica WA314

characteristic: infect

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

characteristic: organism part

text: monocyte

characteristic: progenitor cell type

text: Homo sapiens

text: Sample 33


E-MTAB-10475:Sample 34

text: Institute of Medical Microbiology, Virology and Hygiene, University Medical Center Hamburg-Eppendorf (UKE)

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10475:Sample 34

text: ArrayExpress

text: macrophage

text: human

text: Yersinia enterocolitica WA314

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 34

characteristic: title


E-MTAB-10475:Sample 35

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-10475:Sample 35

text: ArrayExpress

text: macrophage

text: human

text: Yersinia enterocolitica WA314

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 35


E-MTAB-10475:Sample 36

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: E-MTAB-10475:Sample 36

text: ArrayExpress

text: macrophage

text: human

text: Yersinia enterocolitica WA314

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 36


E-MTAB-10475:Sample 37

text: public

characteristic: SRA accession

text: E-MTAB-10475:Sample 37

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: macrophage

text: human

text: Yersinia enterocolitica WA314deltaYersiniapM

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 37


E-MTAB-10475:Sample 38

text: public

text: E-MTAB-10475:Sample 38

text: ArrayExpress

text: macrophage

characteristic: cell type

text: human

characteristic: common name

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 38


E-MTAB-10475:Sample 39

text: public

text: E-MTAB-10475:Sample 39

text: ArrayExpress

text: macrophage

text: human

text: Yersinia enterocolitica WA314deltaYersiniapP

characteristic: infect

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

characteristic: organism part

text: monocyte

text: Homo sapiens

text: Sample 39


E-MTAB-10475:Sample 4

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10475:Sample 4

text: ArrayExpress

text: macrophage

text: human

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

characteristic: progenitor cell type

text: Homo sapiens

text: Sample 4


E-MTAB-10475:Sample 40

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-10475:Sample 40

text: ArrayExpress

text: macrophage

text: human

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 40

characteristic: title


E-MTAB-10475:Sample 41

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-10475:Sample 41

text: ArrayExpress

text: macrophage

text: human

text: mock

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 41


E-MTAB-10475:Sample 42

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10475:Sample 42

characteristic: Submitter Id

text: ArrayExpress

text: macrophage

text: human

text: mock

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 42


E-MTAB-10475:Sample 43

text: public

text: E-MTAB-10475:Sample 43

text: ArrayExpress

characteristic: broker name

text: macrophage

characteristic: cell type

text: human

characteristic: common name

text: Yersinia enterocolitica WAC

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 43


E-MTAB-10475:Sample 44

text: public

text: E-MTAB-10475:Sample 44

text: ArrayExpress

text: macrophage

text: human

characteristic: description

text: Yersinia enterocolitica WAC

characteristic: infect

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 44


E-MTAB-10475:Sample 45

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10475:Sample 45

text: ArrayExpress

text: macrophage

text: human

text: Yersinia enterocolitica WA314

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: monocyte

text: Homo sapiens

text: Sample 45


E-MTAB-10475:Sample 46

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-10475:Sample 46

text: ArrayExpress

text: macrophage

text: human

text: Yersinia enterocolitica WA314

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

characteristic: progenitor cell type

text: Homo sapiens

text: Sample 46


E-MTAB-10475:Sample 5

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-10475:Sample 5

text: ArrayExpress

text: macrophage

text: human

text: mock

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 5

characteristic: title


E-MTAB-10475:Sample 6

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10475:Sample 6

text: ArrayExpress

text: macrophage

text: human

text: mock

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 6


E-MTAB-10475:Sample 7

text: public

text: E-MTAB-10475:Sample 7

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: macrophage

characteristic: cell type

text: human

text: Yersinia enterocolitica WAC

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 7


E-MTAB-10475:Sample 8

text: public

text: E-MTAB-10475:Sample 8

text: ArrayExpress

text: macrophage

text: human

characteristic: common name

characteristic: description

text: Yersinia enterocolitica WAC

characteristic: infect

text: Homo sapiens

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 8


E-MTAB-10475:Sample 9

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10475:Sample 9

text: ArrayExpress

text: macrophage

text: human

text: Yersinia enterocolitica WA314

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: monocyte

text: Homo sapiens

text: Sample 9


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

tag: Namespace:LUXEMBOURG CENTRE FOR SYSTEMS BIOMEDICINE

characteristic: collection date

text: human-associated

characteristic: environment (biome)

text: human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Luxembourg

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metatranscriptome

characteristic: investigation type

text: metagenome

text: ex-BiomolXtract

characteristic: project name

text: metagenome

text: Illumina NextSeq 500

characteristic: sequencing method

text: int-RNA


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LUXEMBOURG CENTRE FOR SYSTEMS BIOMEDICINE

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human-associated

text: human gut

text: feces

text: Luxembourg

text: human-gut

text: metatranscriptome

text: metagenome

text: ex-BiomolXtract

text: metagenome

text: Illumina NextSeq 500

text: int-RNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: DANONE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: human

characteristic: common name

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Gut Stool Microbiome


text: INSTITUT PASTEUR DE PARIS

text: public

tag: Namespace:INSTITUT PASTEUR DE PARIS

characteristic: collection date

text: Bacterial culture

characteristic: description

text: France

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: human

characteristic: host scientific name

characteristic: isolate

text: nasopharynx

characteristic: isolation source

text: Bordetella parapertussis

text: Bordetella parapertussis

text: Bordetella parapertussis strain


text: Plasmodium falciparum

characteristic: ArrayExpress-SPECIES

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum

characteristic: subject id


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

text: public

characteristic: SRA accession

tag: Namespace:Institut national de recherche en agriculture, alimentation et environnement (INRAE)

characteristic: Submitter Id

unit: day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: barrel medic

text: Jemalong

characteristic: cultivar

text: Protocols: We initiated PEG-treatments at different times before harvest. All samples were collected from 45 days-old plants. We collected three replicate samples for each time point, and each replicate was a pool of the nodules of 3 plants. For the transcriptome experiments, samples were collected at time 0 (controls) and after 6 hours, 1-, 3- and 5-days PEG treatment. Medicago truncatula Jemalong A17 seeds were scarified, germinated as described in Lambert et al. (Lambert, I. et al. J Exp Bot 2020 - http://dx.doi.org/10.1093/jxb/eraa221). Individual plantlets were transferred into hydroponic culture tanks containing a vigorously aerated HY basal nutrient solution adjusted to 5.8 with KOH and supplemented with 1 mM KNO3. We cut the primary root tips of plantlets to promote branching of the root system. The culture chambers conditions were a light intensity of 250 μmol s−1 m−2 photosynthetically active radiation, relative humidity of 70%, a light/dark cycle of 16h/8h and an ambient temperature of 22°C/20°C. We separated the root systems of 4-week-old plants into two parts. The 3-week-old plants were transferred to a nutrient solution adjusted to pH7 supplemented with KNO3 0.5 mM containing the Sinorhizobium medicae md4 bacteria (107 cfu/ml). Typically, nodules appeared after 4 to 6 days and were functional after two weeks. After inoculation, nutrients solutions without mineral N supplement were renewed every week and adjusted to pH7. For split-root experiments, the root systems of 5-week-old plants were separated into two parts, each side being installed in a separate compartment filled with the same aerated nutrient solution. We initiated the PEG treatment (PEG 8000, 150g/l) at various times before harvest to compare plants of the same age (45 days old plants). At first, grinding with mortar and pestle is carried out in liquid nitrogen to homogenise the sample. We took an aliquot of 200mg to extract RNAs using miRNeasy® Mini Kit (Qiagen, Venlo, Netherlands) according to the supplier's recommendations. RNAs concentration were measured using the NANODROP 1000 spectrometer (Thermo-Fisher Scientific, Waltham, Massachusetts, USA), and samples kept at -20°C. RNA integrity quality control was assessed using the BioAnalyser (BioRad Laboratories Inc., Hercules, California, USA). For each RNA extraction, polyadenylated plant mRNA libraries were generated and sequenced. Library preparation and sequencing were performed at the MGX-Montpellier GenomiX Facilities (Montpellier, France). Libraries for sequencing were prepared using the TruSeq Stranded mRNA Sample Preparation Kit (Illumina, San Diego, USA). Library quality was checked using the Standard Sensitivity NGS Kit on the Advanced Analytical Fragment Analyzer (Agilent Technologies, Inc., Santa Clara, California, USA), and concentration optimised, performing a qPCR (Light Cycler 480, Roche, Basel, Switzerland).

text: sporophyte vegetative stage

characteristic: developmental stage

characteristic: genotype

text: Sinorhizobium medicae md4 inoculation

characteristic: growth condition

text: Medicago truncatula

text: Medicago truncatula

text: root nodule

characteristic: organism part

text: Medicago truncatula

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institut national de recherche en agriculture, alimentation et environnement (INRAE)

characteristic: INSDC last update

text: public

text: ArrayExpress

text: barrel medic

characteristic: common name

text: Jemalong

characteristic: description

text: sporophyte vegetative stage

text: Sinorhizobium medicae md4 inoculation

text: Medicago truncatula

characteristic: organism

text: Medicago truncatula

text: root nodule

text: Medicago truncatula


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: ArrayExpress

text: barrel medic

text: Jemalong

text: sporophyte vegetative stage

text: Sinorhizobium medicae md4 inoculation

text: Medicago truncatula

text: Medicago truncatula

text: root

text: Medicago truncatula


text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: barrel medic

text: Jemalong A17

characteristic: cultivar

text: Protocols: We initiated Ar/O2 treatments at different time before harvest. All samples were collected from 45 day-old plants. We collected three replicate samples for each time point, and each replicate was a pool of the nodules of 3 plants. For the transcriptome experiments, samples were collected at time 0 (controls) and after 6 hours, 1-, 3- and 5-days Ar/O2 treatment. Medicago truncatula Jemalong A17 seeds were scarified, germinated as described in Lambert et al. (Lambert, I. et al. J Exp Bot 2020 - http://dx.doi.org/10.1093/jxb/eraa221). Individual plantlets were transferred into hydroponic culture tanks containing a vigorously aerated HY basal nutrient solution adjusted to 5.8 with KOH and supplemented with 1 mM KNO3. We cut the primary root tips of plantlets to promote branching of the root system. The culture chambers conditions were a light intensity of 250 μmol s−1 m−2 photosynthetically active radiation, relative humidity of 70%, a light/dark cycle of 16h/8h and an ambient temperature of 22°C/20°C. We separated the root systems of 4-week-old plants into two parts. The 3-week-old plants were transferred to a nutrient solution adjusted to pH7 supplemented with KNO3 0.5 mM containing the Sinorhizobium medicae md4 bacteria (107 cfu/ml). Typically, nodules appeared after 4 to 6 days and were functional after two weeks. After inoculation, nutrients solutions without mineral N supplement were renewed every week and adjusted to pH7. For split-root experiments, the root systems of 5-week-old plants were separated into two parts, each side being installed in a separate compartment filled with the same aerated nutrient solution. We initiated the continuous flow of Ar/O2 ( 80/20 v/v) at various times before harvest to compare plants of the same age (45 day old plants). Nutrient solutions were changed daily after the initiation of treatments. At first, grinding with mortar and pestle is carried out in liquid nitrogen to homogenise the sample. We took an aliquot of 200mg to extract RNAs using miRNeasy® Mini Kit (Qiagen, Venlo, Netherlands) according to the supplier's recommendations. RNAs concentration were measured using the NANODROP 1000 spectrometer (Thermo-Fisher Scientific, Waltham, Massachusetts, USA), and samples kept at -20°C. RNA integrity quality control was assessed using the BioAnalyser (BioRad Laboratories Inc., Hercules, California, USA). For each RNA extraction, polyadenylated plant mRNA libraries were generated and sequenced. Library preparation and sequencing were performed at the MGX-Montpellier GenomiX Facilities (Montpellier, France). Libraries for sequencing were prepared using the TruSeq Stranded mRNA Sample Preparation Kit (Illumina, San Diego, USA). Library quality was checked using the Standard Sensitivity NGS Kit on the Advanced Analytical Fragment Analyzer (Agilent Technologies, Inc., Santa Clara, California, USA), and concentration optimised, performing a qPCR (Light Cycler 480, Roche, Basel, Switzerland).

text: sporophyte vegetative stage

text: wild type genotype

text: limited nitrogen exposure

text: Sinorhizobium medicae md4

characteristic: infect

text: Medicago truncatula

text: Medicago truncatula

text: root nodule

text: Medicago truncatula


characteristic: ENA-LAST-UPDATE

text: public

text: ArrayExpress

text: barrel medic

text: Jemalong A17

text: sporophyte vegetative stage

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: normal nitrogen exposure

characteristic: growth condition

text: Sinorhizobium medicae md4

text: Medicago truncatula

text: Medicago truncatula

text: root nodule

characteristic: organism part

text: Medicago truncatula

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC last update

text: public

text: ArrayExpress

text: barrel medic

characteristic: common name

text: Jemalong A17

characteristic: description

text: sporophyte vegetative stage

text: wild type genotype

text: limited nitrogen exposure

text: Sinorhizobium medicae md4

text: Medicago truncatula

characteristic: organism

text: Medicago truncatula

text: root

text: Medicago truncatula


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: barrel medic

text: Jemalong A17

text: sporophyte vegetative stage

text: wild type genotype

text: normal nitrogen exposure

text: Sinorhizobium medicae md4

text: Medicago truncatula

text: Medicago truncatula

text: root

text: Medicago truncatula


characteristic: ENA-LAST-UPDATE

text: Lorraine University

text: public

tag: Namespace:Lorraine University

text: human

text: Total RNA sample WT

text: Homo sapiens

text: Homo sapiens

text: METTL8 mito tRNA analysis AlkAniline-Seq


text: Lorraine University

text: public

text: human

text: Total RNA sample METTL KO

text: Homo sapiens

text: Homo sapiens


text: Lorraine University

text: public

text: human

text: Total RNA sample WT METTL8 OE

text: Homo sapiens

text: Homo sapiens


text: Lorraine University

text: public

text: human

text: Total RNA sample CAPAN1

text: Homo sapiens

text: Homo sapiens


text: Lorraine University

text: public

text: human

text: Total RNA sample PANC1

text: Homo sapiens

text: Homo sapiens


text: EMBL

text: public

text: ArrayExpress

characteristic: broker name

text: Esg1-tdTomato reporter mESC line

characteristic: cell line

text: mouse embryonic stem cell

characteristic: cell type

text: house mouse

text: Protocols: Esg1-tdTomato or p53-tdTomato reporter ESC line containing inducible dCas9::KRAB or dCas9::GFP control and target-specific gRNA have bee treated with DOX (100 ng/ml) for 7 days to impose epigenetic silencing of the reporter. Memory of the silenced state has been assayed after 4 or 7 days of DOX washout. This ATAC-seq protocol was adapted from Corces et al. Nature Methods 2017. Briefly, fresh cells were collected and nuclei subjected to tagmentation with the Tn5 transposase using the Illumina Tagment DNA Enzyme and Buffer Kit #20034197. Fragmented DNA was isolated and subjected to library amplification with dual barcoded primers P5 and P7 Nextera XT Index kit (Illumina #15055293).

text: gene knock in

characteristic: genetic modification

text: Dppa2KO CloneB6 Esg1-tdTomato reporter and dCas9::KRAB

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: DOX washout

characteristic: treatment

characteristic: treatment time


characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMBL

characteristic: INSDC last update

text: public

text: ArrayExpress

text: Esg1-tdTomato reporter mESC line

text: mouse embryonic stem cell

text: house mouse

characteristic: common name

text: gene knock in

text: Dppa2KO CloneC7 Esg1-tdTomato reporter and dCas9::KRAB

text: Mus musculus

text: Mus musculus

text: Mus musculus

characteristic: title

text: DOX washout


characteristic: ENA-FIRST-PUBLIC

text: EMBL

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: Esg1-tdTomato reporter mESC line

text: mouse embryonic stem cell

text: house mouse

characteristic: description

text: gene knock in

text: WT cells with Esg1-tdTomato reporter and dCas9::KRAB

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: DOX washout


characteristic: ENA-LAST-UPDATE

text: EMBL

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: Esg1-tdTomato ESC with Cas9-GFP and dCas9::KRAB

text: mouse embryonic stem cell

text: house mouse

text: Protocols: Esg1-tdTomato or p53-tdTomato reporter ESC line containing inducible dCas9::KRAB or dCas9::GFP control and target-specific gRNA have bee treated with DOX (100 ng/ml) for 7 days to impose epigenetic silencing of the reporter. Memory of the silenced state has been assayed after 4 or 7 days of DOX washout. For the screen, ESC line carrying a spCas9-GFP and the endogenous Esg1-tdTomato reporter have been transduced with lentiviral gRNA library (Doench et al., 2016) and selected with puromycin. After inactivation of the SpCas9-GFP cells have been transfected with the epigenetic editing tool to impose silencing of the Esg1-tdTomato reporter for 7 days by DOX induction. tdTomato negative cells were sorted at FACS and put back in culture in absence of DOX for other 3 or 7 days. At this timepoints cells were sorted again using 3 gating strategy to separate the 2,5% bottom tdTomato negative cells or cells ranging from fully to mildly silenced (TOMneg-wide) and in parallel also tdTomato positive cells were isolated. These cells were then subjected to DNA extraction using DNeasy blood and tissue kit (Qiagen # 69504) following manufacturer instruction including RNAse step. Genomic DNA extracted from sorted cells was subjected to library amplification with custom primers containing the P7 flow cell overhangs using the Q5 Hot Start High-Fidelity polymerase (NEB #M0494S) for 22-24 cycles. sgRNA amplicons were purified with SPRI beads, checked and quantitated with a tape station automated electrophoresis system and pooled for next generation sequencing.

text: gene knock in

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: DOX washout


text: EMBL

text: public

text: ArrayExpress

characteristic: cell line

text: mouse embryonic stem cell

characteristic: cell type

text: house mouse

text: gene knock in

characteristic: genetic modification

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: DOX treatment

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMBL

characteristic: INSDC last update

text: public

text: ArrayExpress

text: Esg1-tdTomato ESC with Cas9-GFP

text: mouse embryonic stem cell

text: house mouse

characteristic: common name

text: gene knock in

text: Esg1-tdTomato ESC with Cas9-GFP

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Untransfected

text: DOX treatment

characteristic: treatment time


characteristic: ENA-FIRST-PUBLIC

text: EMBL

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: p53-tdTomato reporter mESC line

text: endoderm

text: house mouse

text: Protocols: Esg1-tdTomato or p53-tdTomato reporter ESC line containing inducible dCas9::KRAB or dCas9::GFP control and target-specific gRNA have bee treated with DOX (100) for 7 days to impose epigenetic silencing of the reporter. Memory of the silenced state has been assayed after 4 or 7 days of DOX washout. This protocol is to differentiate mESC into definitive endoderm with IDE1. The protocol is adjusted from Borowiak et al., Cell stem Cell., 2009. This ATAC-seq protocol was adapted from Corces et al. Nature Methods 2017. Briefly, fresh cells were collected and nuclei subjected to tagmentation with the Tn5 transposase using the Illumina Tagment DNA Enzyme and Buffer Kit #20034197. Fragmented DNA was isolated and subjected to library amplification with dual barcoded primers P5 and P7 Nextera XT Index kit (Illumina #15055293).

characteristic: description

text: gene knock in

text: p53-tdTomato reporter mESC line with dCas9::GFP and gRNA

text: Mus musculus

text: Mus musculus

text: Mus musculus

characteristic: title

text: DOX washout


characteristic: ENA-LAST-UPDATE

text: EMBL

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: p53-tdTomato reporter mESC line

text: endoderm

text: house mouse

text: gene knock in

text: p53-tdTomato reporter mESC line with dCas9::KRAB and gRNA

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: DOX washout


text: EMBL

text: public

text: ArrayExpress

characteristic: broker name

text: p53-tdTomato reporter mESC line

characteristic: cell line

text: endoderm

characteristic: cell type

text: house mouse

text: gene knock in

characteristic: genetic modification

text: p53-tdTomato reporter mESC line

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: DOX washout


characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMBL

characteristic: INSDC last update

text: public

text: ArrayExpress

text: p53-tdTomato reporter mESC line

text: embryonic stem cell

text: house mouse

characteristic: common name

text: doxycycline

characteristic: compound

text: Protocols: Esg1-tdTomato or p53-tdTomato reporter ESC line containing inducible dCas9::KRAB or dCas9::GFP control and target-specific gRNA have bee treated with DOX (100) for 7 days to impose epigenetic silencing of the reporter. Memory of the silenced state has been assayed after 4 or 7 days of DOX washout. This ATAC-seq protocol was adapted from Corces et al. Nature Methods 2017. Briefly, fresh cells were collected and nuclei subjected to tagmentation with the Tn5 transposase using the Illumina Tagment DNA Enzyme and Buffer Kit #20034197. Fragmented DNA was isolated and subjected to library amplification with dual barcoded primers P5 and P7 Nextera XT Index kit (Illumina #15055293).

text: gene knock in

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: DOX treatment

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

text: EMBL

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: p53-tdTomato reporter mESC line

text: embryonic stem cell

text: house mouse

text: doxycycline

characteristic: description

text: gene knock in

text: Mus musculus

text: Mus musculus

text: Mus musculus

characteristic: title

text: DOX treatment

characteristic: treatment time


characteristic: ENA-LAST-UPDATE

text: EMBL

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: p53-tdTomato reporter mESC line

text: embryonic stem cell

text: house mouse

text: doxycycline

text: gene knock in

text: p53-tdTomato reporter mESC line

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: DOX treatment


characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMBL

text: public

text: ArrayExpress

text: p53-tdTomato reporter mESC line

characteristic: cell line

text: embryonic stem cell

characteristic: cell type

text: house mouse

text: gene knock in

characteristic: genetic modification

text: p53-tdTomato reporter mESC line

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: DOX treatment


characteristic: ENA-FIRST-PUBLIC

text: EMBL

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: ArrayExpress

text: p53-tdTomato reporter mESC line

text: embryonic stem cell

text: house mouse

characteristic: common name

text: gene knock in

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: DOX washout

characteristic: treatment


characteristic: ENA-LAST-UPDATE

text: EMBL

characteristic: INSDC first public

text: public

text: ArrayExpress

text: p53-tdTomato reporter mESC line

text: embryonic stem cell

text: house mouse

characteristic: description

text: gene knock in

text: Mus musculus

text: Mus musculus

text: Mus musculus

characteristic: title

text: DOX washout

characteristic: treatment time


text: EMBL

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: p53-tdTomato reporter mESC line

text: embryonic stem cell

text: house mouse

text: gene knock in

text: p53-tdTomato reporter mESC line

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

text: DOX washout


characteristic: ENA-CHECKLIST

characteristic: External Id

text: GxABT - ULiege

text: public

tag: Namespace:GxABT - ULiege

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_57_3.5w_Barg_Batch 1_L


characteristic: ENA-FIRST-PUBLIC

text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_58_3.5w_Gelt_Batch 1_H


text: GxABT - ULiege

characteristic: INSDC center name

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_59_3.5w_Gelt_Batch 1_L


text: GxABT - ULiege

characteristic: INSDC last update

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_60_3.5w_Gelt_Batch 1_H


text: GxABT - ULiege

text: public

text: pig

characteristic: common name

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_61_3.5w_Barg_Batch 1_L


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_62_3.5w_Gelt_Batch 1_H


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_63_3.5w_Barg_Batch 1_L


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_64_3.5w_Barg_Batch 1_H


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_65_3.5w_Gelt_Batch 1_L


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_66_3.5w_Barg_Batch 1_H


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_67_3.5w_Gelt_Batch 1_L


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_68_3.5w_Barg_Batch 1_H


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_69_4.5w_Barg_Batch 1_LLP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_70_4.5w_Barg_Batch 1_HHP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_71_4.5w_Barg_Batch 1_HLP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_72_4.5w_Barg_Batch 1_LHP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_73_4.5w_Barg_Batch 1_HLP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_74_4.5w_Barg_Batch 1_HHP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_75_4.5w_Barg_Batch 1_LLP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_76_4.5w_Barg_Batch 1_LHP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_77_4.5w_Barg_Batch 1_HLP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_78_4.5w_Barg_Batch 1_LLP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_79_4.5w_Barg_Batch 1_HHP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_80_4.5w_Barg_Batch 1_LLP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_81_4.5w_Barg_Batch 1_HHP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_82_4.5w_Barg_Batch 1_LHP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_83_4.5w_Barg_Batch 1_HLP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_84_4.5w_Barg_Batch 1_LHP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_85_3.5w_Barg_Batch 2_L


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_86_3.5w_Gelt_Batch 2_H


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_87_3.5w_Gelt_Batch 2_L


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_88_3.5w_Gelt_Batch 2_H


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_89_3.5w_Barg_Batch 2_L


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_90_3.5w_Gelt_Batch 2_H


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_91_3.5w_Barg_Batch 2_L


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_92_3.5w_Barg_Batch 2_H


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_93_3.5w_Gelt_Batch 2_L


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_94_3.5w_Barg_Batch 2_H


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_95_3.5w_Gelt_Batch 2_L


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_96_3.5w_Barg_Batch 2_H


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_97_4.5w_Barg_Batch 2_HLP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_98_4.5w_Barg_Batch 2_LHP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_99_4.5w_Barg_Batch 2_HLP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_100_4.5w_Barg_Batch 2_LLP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_101_4.5w_Barg_Batch 2_HLP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_102_4.5w_Barg_Batch 2_LHP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_103_4.5w_Barg_Batch 2_HHP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_104_4.5w_Barg_Batch 2_LLP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_105_4.5w_Barg_Batch 2_HHP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_106_4.5w_Barg_Batch 2_LLP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_107_4.5w_Barg_Batch 2_HHP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_108_4.5w_Barg_Batch 2_LHP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_109_4.5w_Barg_Batch 2_HLP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_110_4.5w_Barg_Batch 2_LHP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_111_4.5w_Barg_Batch 2_HHP


text: GxABT - ULiege

text: public

text: pig

text: Sus scrofa

text: Sus scrofa

text: Pig_liver_112_4.5w_Barg_Batch 2_LLP


text: UMR CNRS 5557 Ecologie Microbienne

text: public

tag: Namespace:UMR CNRS 5557 Ecologie Microbienne

text: SIP fraction from guts of female Aedes albopictus after 10h of 12C-fructose ingestion

text: metagenome

text: metagenome


text: UMR CNRS 5557 Ecologie Microbienne

text: public

text: SIP fraction from guts of female Aedes albopictus after 30h of 12C-fructose ingestion

text: metagenome

text: metagenome


text: UMR CNRS 5557 Ecologie Microbienne

text: public

text: SIP fraction from guts of female Aedes albopictus after 4h of 12C-fructose ingestion

text: metagenome

text: metagenome


text: UMR CNRS 5557 Ecologie Microbienne

text: public

text: SIP fraction from guts of male Aedes albopictus after 10h of 12C-fructose ingestion

text: metagenome

text: metagenome


text: UMR CNRS 5557 Ecologie Microbienne

text: public

text: SIP fraction from guts of male Aedes albopictus after 4h of 12C-fructose ingestion

text: metagenome

text: metagenome


text: UMR CNRS 5557 Ecologie Microbienne

text: public

text: SIP fraction from guts of female Aedes albopictus after 10h of 13C-fructose ingestion

text: metagenome

text: metagenome


text: UMR CNRS 5557 Ecologie Microbienne

text: public

text: SIP fraction from guts of female Aedes albopictus after 30h of 13C-fructose ingestion

text: metagenome

text: metagenome


text: UMR CNRS 5557 Ecologie Microbienne

text: public

text: SIP fraction from guts of female Aedes albopictus after 4h of 13C-fructose ingestion

text: metagenome

text: metagenome


text: UMR CNRS 5557 Ecologie Microbienne

text: public

text: SIP fraction from guts of male Aedes albopictus after 10h of 13C-fructose ingestion

text: metagenome

text: metagenome


text: UMR CNRS 5557 Ecologie Microbienne

text: public

text: SIP fraction from guts of male Aedes albopictus after 4h of 13C-fructose ingestion

text: metagenome

text: metagenome


text: UMR CNRS 5557 Ecologie Microbienne

text: public

text: Water from PCR2

text: metagenome

text: metagenome


text: UMR CNRS 5557 Ecologie Microbienne

text: public

text: Blank from DNA extraction

text: metagenome

text: metagenome

text: ITS-TEXT


text: UMR CNRS 5557 Ecologie Microbienne

text: public

text: SIP fraction from guts of female Aedes albopictus non sugar fed

text: metagenome

text: metagenome


text: UMR CNRS 5557 Ecologie Microbienne

text: public

text: SIP fraction from guts of male Aedes albopictus non sugar fed

text: metagenome

text: metagenome


text: UMR CNRS 5557 Ecologie Microbienne

text: public

text: Blank from PCR1

text: metagenome

text: metagenome

text: ITS-TPCR


text: LUXEMBOURG CENTRE FOR SYSTEMS BIOMEDICINE

text: public

characteristic: collection date

text: human-associated

characteristic: environment (biome)

text: human gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Luxembourg

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: metagenome

text: ex-BiomolXtract

characteristic: project name

text: metagenome

text: Illumina NextSeq 500

characteristic: sequencing method

text: ex-DNA


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: human-associated

text: human gut

text: feces

text: Luxembourg

text: human-gut

text: metatranscriptome

text: metagenome

characteristic: organism

text: ex-BiomolXtract

text: metagenome

text: Illumina NextSeq 500

text: ex-sRNA

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: collection date

text: human-associated

characteristic: environment (biome)

text: human gut

characteristic: environment (feature)

text: feces

text: Luxembourg

text: human-gut

text: metatranscriptome

text: metagenome

text: ex-BiomolXtract

text: metagenome

text: Illumina NextSeq 500

text: ex-lRNA


text: public

tag: Namespace:MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY

text: Pristionchus pacificus

text: Pristionchus pacificus


text: UPPSALA UNIVERISTY

text: public

tag: Namespace:UPPSALA UNIVERISTY

text: Control Water

characteristic: description

text: water

text: microcosm

text: water

characteristic: environment (material)

text: Sweden

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Daphnia magna

text: DDD

characteristic: project name

text: Daphnia magna

text: Illumina MiSeq

text: Cwater


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: UPPSALA UNIVERISTY

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: exposure to microplastics (water)

text: water

text: microcosm

text: water

text: Sweden

text: host-associated

text: metagenome

text: Daphnia magna

characteristic: organism

text: DDD

text: Daphnia magna

text: Illumina MiSeq

characteristic: sequencing method

text: Mpwater


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UPPSALA UNIVERISTY

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: collection date

text: Combine exposure to deltamethrin and microplastics (water)

text: water

characteristic: environment (biome)

text: microcosm

characteristic: environment (feature)

text: water

text: Sweden

text: host-associated

text: metagenome

text: Daphnia magna

text: DDD

text: Daphnia magna

text: Illumina MiSeq

text: PestMPwater

characteristic: title


text: UPPSALA UNIVERISTY

text: public

text: exposure to deltamethrin (water)

characteristic: description

text: water

text: microcosm

text: water

characteristic: environment (material)

text: Sweden

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Daphnia magna

text: DDD

characteristic: project name

text: Daphnia magna

text: Illumina MiSeq

text: Pestwater


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: UPPSALA UNIVERISTY

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Control (daphnia)

text: water

text: microcosm

text: water

text: Sweden

text: host-associated

text: metagenome

text: Daphnia magna

characteristic: organism

text: DDD

text: Daphnia magna

text: Illumina MiSeq

characteristic: sequencing method

text: Cdaphnia


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UPPSALA UNIVERISTY

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: collection date

text: exposure to microplastics (daphnia)

text: water

characteristic: environment (biome)

text: microcosm

characteristic: environment (feature)

text: water

text: Sweden

text: host-associated

text: metagenome

text: Daphnia magna

text: DDD

text: Daphnia magna

text: Illumina MiSeq

text: MPdaphnia

characteristic: title


text: UPPSALA UNIVERISTY

text: public

text: exposure to deltamethrin (daphnia)

characteristic: description

text: water

text: microcosm

text: water

characteristic: environment (material)

text: Sweden

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Daphnia magna

text: DDD

characteristic: project name

text: Daphnia magna

text: Illumina MiSeq

text: Pestdaphnia


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: UPPSALA UNIVERISTY

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Combine exposure to deltamethrin and microplastics (daphnia)

text: water

text: microcosm

text: water

text: Sweden

text: host-associated

text: metagenome

text: Daphnia magna

characteristic: organism

text: DDD

text: Daphnia magna

text: Illumina MiSeq

characteristic: sequencing method

text: PestMPdaphnia


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UPPSALA UNIVERISTY

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: collection date

text: Control (damselfly)

text: water

characteristic: environment (biome)

text: microcosm

characteristic: environment (feature)

text: water

text: Sweden

text: host-associated

text: metagenome

text: Ischnura elegans

text: DDD

text: Ischnura elegans

text: Illumina MiSeq

text: Cdam

characteristic: title


text: UPPSALA UNIVERISTY

text: public

text: exposure to microplastics (damselfly)

characteristic: description

text: water

text: microcosm

text: water

characteristic: environment (material)

text: Sweden

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Ischnura elegans

text: DDD

characteristic: project name

text: Ischnura elegans

text: Illumina MiSeq

text: MPdam


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: UPPSALA UNIVERISTY

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: exposure to deltamethrin (damselfly)

text: water

text: microcosm

text: water

text: Sweden

text: host-associated

text: metagenome

text: Ischnura elegans

characteristic: organism

text: DDD

text: Ischnura elegans

text: Illumina MiSeq

characteristic: sequencing method

text: Pestdam


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UPPSALA UNIVERISTY

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: collection date

text: Combine exposure to deltamethrin and microplastics (damselfly)

text: water

characteristic: environment (biome)

text: microcosm

characteristic: environment (feature)

text: water

text: Sweden

text: host-associated

text: metagenome

text: Ischnura elegans

text: DDD

text: Ischnura elegans

text: Illumina MiSeq

text: PestMPdam

characteristic: title


text: UPPSALA UNIVERISTY

text: public

text: spangled skimmer

characteristic: common name

text: Control (dragonfly)

characteristic: description

text: water

text: microcosm

text: water

characteristic: environment (material)

text: Sweden

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Aeshna cyanea

text: DDD

characteristic: project name

text: Aeshna cyanea

text: Illumina MiSeq

text: Cdragon


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UPPSALA UNIVERISTY

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: spangled skimmer

text: exposure to microplastics (dragonfly)

text: water

text: microcosm

text: water

text: Sweden

text: host-associated

text: metagenome

text: Aeshna cyanea

characteristic: organism

text: DDD

text: Aeshna cyanea

text: Illumina MiSeq

characteristic: sequencing method

text: MPdragon


characteristic: External Id

text: UPPSALA UNIVERISTY

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: collection date

text: spangled skimmer

characteristic: common name

text: Combine exposure to deltamethrin and microplastics (dragonfly)

characteristic: description

text: water

characteristic: environment (biome)

text: microcosm

characteristic: environment (feature)

text: water

text: Sweden

text: host-associated

text: metagenome

text: Aeshna cyanea

text: DDD

text: Aeshna cyanea

text: Illumina MiSeq

text: PestMPdragon

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UPPSALA UNIVERISTY

text: public

text: spangled skimmer

text: exposure to deltamethrin (dragonfly)

text: water

text: microcosm

text: water

characteristic: environment (material)

text: Sweden

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: Aeshna cyanea

text: DDD

characteristic: project name

text: Aeshna cyanea

text: Illumina MiSeq

text: Pestdragon


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UDS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: baker's yeast

text: Saccharomyces cerevisiae

characteristic: organism

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G3 background, clone 1


characteristic: ENA-CHECKLIST

text: UDS

characteristic: INSDC last update

text: public

text: baker's yeast

characteristic: common name

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G3 background, clone 2

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G3 background, clone 3


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G3 background, clone 4


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G3 background, clone 5


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G3 background, clone 6


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G3 background, clone 7


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G3 background, clone 8


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G2 background, clone 1


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G2 background, clone 2


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G2 background, clone 3


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G2 background, clone 4


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G2 background, clone 5


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G2 background, clone 6


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G2 background, clone 7


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G2 background, clone 8


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G2 background, clone 9


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G2 background, clone 10


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G2 background, clone 11


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G1 background, clone 1


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G1 background, clone 2


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G1 background, clone 3


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G1 background, clone 4


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G1 background, clone 5


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G1 background, clone 6


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, G1 background, clone 7


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D3 background, clone 1


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D3 background, clone 2


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D3 background, clone 3


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D3 background, clone 4


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D3 background, clone 5


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D3 background, clone 6


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D1 background, clone 2


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D1 background, clone 3


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D1 background, clone 4


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D1 background, clone 5


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D1 background, clone 1


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D2 background, clone 1


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D2 background, clone 2


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D2 background, clone 3


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D2 background, clone 4


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D2 background, clone 5


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D2 background, clone 6


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D2 background, clone 7


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D2 background, clone 8


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D2 background, clone 9


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D2 background, clone 10


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D2 background, clone 11


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D2 background, clone 12


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, D2 background, clone 13


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E2 background, clone 1


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E2 background, clone 2


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E2 background, clone 3


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E2 background, clone 4


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E2 background, clone 5


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E2 background, clone 6


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E2 background, clone 7


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E2 background, clone 8


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E2 background, clone 9


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E1 background, clone 1


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E1 background, clone 2


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E1 background, clone 3


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E1 background, clone 4


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E1 background, clone 5


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E1 background, clone 6


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E1 background, clone 7


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E1 background, clone 8


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E3 background, clone 1


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E3 background, clone 2


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E3 background, clone 3


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E3 background, clone 4


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E3 background, clone 5


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E3 background, clone 6


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E3 background, clone 7


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E3 background, clone 8


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E3 background, clone 9


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E3 background, clone 10


text: UDS

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae, E3 background, clone 11


text: ZMBP

text: public

characteristic: collection date

text: plant

text: desert

characteristic: environment (biome)

text: rare vegetation, hot desert climate ('BWh')

characteristic: environment (feature)

text: leaf

characteristic: environment (material)

text: Peru

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: tomato

characteristic: host common name

text: infected

characteristic: host disease status

text: Solanum peruvianum

characteristic: host genotype

text: Yangas

characteristic: location

text: Solanum peruvianum

text: plant-associated

characteristic: plant-associated environmental package

text: Targeted sequencing of phyllosphere microbiota of wild tomato species

unit: °C

characteristic: sample storage temperature

text: Solanum peruvianum

text: Illumina

characteristic: sequencing method

characteristic: target

characteristic: target region

text: Leaf-associated microbes of sample CD.B5_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: institute for Infectious Diseases

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:institute for Infectious Diseases

characteristic: Submitter Id

text: Nasopharyngeal swab sample of infants in the first year of life

characteristic: description

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: Infant nasopharyngeal swab

characteristic: title


text: institute for Infectious Diseases

text: public

text: Streptococcus mitis

text: Streptococcus mitis

text: Infant nasopharyngeal swab


text: institute for Infectious Diseases

text: public

text: Single strain mock sample from cultured infant nasopharyngeal swab, replicate1

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC1 + MC2; 1:9) mock sample creation from cultured infant nasopharyngeal swabs, replicate1

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC1 + MC2; 1:49) mock sample creation from cultured infant nasopharyngeal swabs, replicate1

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC1 + MC2; 1:89) mock sample creation from cultured infant nasopharyngeal swabs, replicate1

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Single strain mock sample from cultured infant nasopharyngeal swab, replicate2

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC1 + MC2; 1:9) mock sample creation from cultured infant nasopharyngeal swabs, replicate2

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC1 + MC2; 1:49) mock sample creation from cultured infant nasopharyngeal swabs, replicate2

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC1 + MC2; 1:89) mock sample creation from cultured infant nasopharyngeal swabs, replicate2

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Single strain mock sample from cultured infant nasopharyngeal swab, replicate3

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC1 + MC2; 1:9) mock sample creation from cultured infant nasopharyngeal swabs, replicate3

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC1 + MC2; 1:49) mock sample creation from cultured infant nasopharyngeal swabs, replicate3

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC1 + MC2; 1:89) mock sample creation from cultured infant nasopharyngeal swabs, replicate3

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Single strain mock sample from cultured infant nasopharyngeal swab, replicate4

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC1 + MC2; 1:9) mock sample creation from cultured infant nasopharyngeal swabs, replicate4

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC1 + MC2; 1:49) mock sample creation from cultured infant nasopharyngeal swabs, replicate4

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC1 + MC2; 1:89) mock sample creation from cultured infant nasopharyngeal swabs, replicate4

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC6 + MC7; 1:99) mock sample creation from cultured infant nasopharyngeal swabs, replicate1

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC6 + MC7; 1:119) mock sample creation from cultured infant nasopharyngeal swabs, replicate1

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC6 + MC7; 1:139) mock sample creation from cultured infant nasopharyngeal swabs, replicate1

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC6 + MC7; 1:99) mock sample creation from cultured infant nasopharyngeal swabs, replicate2

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC6 + MC7; 1:119) mock sample creation from cultured infant nasopharyngeal swabs, replicate2

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC6 + MC7; 1:139) mock sample creation from cultured infant nasopharyngeal swabs, replicate2

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC6 + MC7; 1:99) mock sample creation from cultured infant nasopharyngeal swabs, replicate3

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC6 + MC7; 1:119) mock sample creation from cultured infant nasopharyngeal swabs, replicate3

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC6 + MC7; 1:139) mock sample creation from cultured infant nasopharyngeal swabs, replicate3

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC6 + MC7; 1:99) mock sample creation from cultured infant nasopharyngeal swabs, replicate4

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC6 + MC7; 1:119) mock sample creation from cultured infant nasopharyngeal swabs, replicate4

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: institute for Infectious Diseases

text: public

text: Mixed strains (MC6 + MC7; 1:139) mock sample creation from cultured infant nasopharyngeal swabs, replicate4

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Mock sample creation


text: Institut Pasteur de la Guyane

text: public

tag: Namespace:Institut Pasteur de la Guyane

characteristic: collection date

text: Microbiota of An. coluzzii mosquitoes fed with blood containing gametocyes, treated with amoxicillin and collected 24h post blood feeding

text: Adult

characteristic: dev stage

characteristic: donor

text: gametocytes

characteristic: gametocytes

text: Burkina Faso

characteristic: geographic location (country and/or sea)

text: Anopheles coluzzii

characteristic: host scientific name

text: Anopheles coluzzii

characteristic: isolation source

text: Anopheles coluzzii

characteristic: sample code

text: sample

characteristic: sample type

text: Anopheles coluzzii

text: Female

characteristic: sex

text: Midgut

characteristic: tissue lib

text: Microbiota of Anopheles gambiae sl mosquitoes reared in field-like conditions

text: Amox

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institut Pasteur de la Guyane

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: African malaria mosquito

characteristic: common name

text: Microbiota of An. gambiae mosquitoes fed with blood containing gametocyes, treated with amoxicillin and collected 24h post blood feeding

text: Adult

text: gametocytes

text: Burkina Faso

text: Anopheles gambiae

text: Anopheles gambiae

text: Anopheles gambiae

text: sample

text: Anopheles gambiae

text: Female

text: Midgut

text: Amox


text: Institut Pasteur de la Guyane

text: public

characteristic: Submitter Id

characteristic: collection date

text: African malaria mosquito

text: Microbiota of An. gambiae mosquitoes fed with blood containing gametocyes, treated with amoxicillin/clavulinic acid and collected 24h post blood feeding

characteristic: description

text: Adult

characteristic: dev stage

characteristic: donor

text: gametocytes

characteristic: gametocytes

text: Burkina Faso

characteristic: geographic location (country and/or sea)

text: Anopheles gambiae

characteristic: host scientific name

text: Anopheles gambiae

text: Anopheles gambiae

characteristic: organism

text: sample

text: Anopheles gambiae

text: Female

text: Midgut

characteristic: title

text: Amox/Clav


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institut Pasteur de la Guyane

text: public

text: Microbiota of An. coluzzii mosquitoes fed with blood containing gametocyes, treated with amoxicillin/clavulinic acid and collected 24h post blood feeding

text: Adult

text: gametocytes

text: Burkina Faso

text: Anopheles coluzzii

text: Anopheles coluzzii

characteristic: isolation source

text: Anopheles coluzzii

characteristic: sample code

text: sample

characteristic: sample type

text: Anopheles coluzzii

text: Female

characteristic: sex

text: Midgut

characteristic: tissue lib

text: Amox/Clav

characteristic: treatment


text: Institut Pasteur de la Guyane

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: African malaria mosquito

characteristic: common name

text: Microbiota of An. gambiae mosquitoes fed with blood containing gametocyes, collected 24h post blood feeding (no antibiotic)

characteristic: description

text: Adult

characteristic: dev stage

text: gametocytes

text: Burkina Faso

text: Anopheles gambiae

text: Anopheles gambiae

text: Anopheles gambiae

text: sample

text: Anopheles gambiae

text: Female

text: Midgut

text: Mock control


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institut Pasteur de la Guyane

text: public

text: Microbiota of An. coluzzii mosquitoes fed with blood containing gametocyes, collected 24h post blood feeding (no antibiotic)

text: Adult

characteristic: donor

text: gametocytes

characteristic: gametocytes

text: Burkina Faso

characteristic: geographic location (country and/or sea)

text: Anopheles coluzzii

characteristic: host scientific name

text: Anopheles coluzzii

text: Anopheles coluzzii

characteristic: organism

text: sample

text: Anopheles coluzzii

text: Female

text: Midgut

characteristic: title

text: Mock control


text: Institut Pasteur de la Guyane

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: African malaria mosquito

text: Microbiota of An. gambiae mosquitoes fed with blood containing gametocyes, treated with amoxicillin and collected 72h post blood feeding

text: Adult

text: gametocytes

text: Burkina Faso

text: Anopheles gambiae

text: Anopheles gambiae

characteristic: isolation source

text: Anopheles gambiae

characteristic: sample code

text: sample

characteristic: sample type

text: Anopheles gambiae

text: Female

characteristic: sex

text: Midgut

characteristic: tissue lib

text: Amox

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institut Pasteur de la Guyane

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Microbiota of An. arabiensis mosquitoes fed with blood containing gametocyes, treated with amoxicillin and collected 72h post blood feeding

characteristic: description

text: Adult

characteristic: dev stage

text: gametocytes

text: Burkina Faso

text: Anopheles arabiensis

text: Anopheles arabiensis

text: Anopheles arabiensis

text: sample

text: Anopheles arabiensis

text: Female

text: Midgut

text: Amox


text: Institut Pasteur de la Guyane

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: African malaria mosquito

characteristic: common name

text: Microbiota of An. gambiae mosquitoes fed with blood containing gametocyes, treated with amoxicillin/clavulinic acid and collected 72h post blood feeding

text: Adult

characteristic: donor

text: gametocytes

characteristic: gametocytes

text: Burkina Faso

characteristic: geographic location (country and/or sea)

text: Anopheles gambiae

characteristic: host scientific name

text: Anopheles gambiae

text: Anopheles gambiae

characteristic: organism

text: sample

text: Anopheles gambiae

text: Female

text: Midgut

characteristic: title

text: Amox/Clav


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Institut Pasteur de la Guyane

text: public

characteristic: INSDC status

text: Microbiota of An. arabiensis mosquitoes fed with blood containing gametocyes, treated with amoxicillin/clavulinic acid and collected 72h post blood feeding

text: Adult

text: gametocytes

text: Burkina Faso

text: Anopheles arabiensis

text: Anopheles arabiensis

characteristic: isolation source

text: Anopheles arabiensis

characteristic: sample code

text: sample

characteristic: sample type

text: Anopheles arabiensis

text: Female

characteristic: sex

text: Midgut

characteristic: tissue lib

text: Amox/Clav

characteristic: treatment


characteristic: External Id

text: Institut Pasteur de la Guyane

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Microbiota of An. arabiensis mosquitoes fed with blood containing gametocyes, collected 72h post blood feeding (no antibiotic)

characteristic: description

text: Adult

characteristic: dev stage

text: gametocytes

text: Burkina Faso

text: Anopheles arabiensis

text: Anopheles arabiensis

text: Anopheles arabiensis

text: sample

text: Anopheles arabiensis

text: Female

text: Midgut

text: Mock control


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Institut Pasteur de la Guyane

text: public

text: African malaria mosquito

characteristic: common name

text: Microbiota of An. gambiae mosquitoes fed with blood containing gametocyes, collected 72h post blood feeding (no antibiotic)

text: Adult

characteristic: donor

text: gametocytes

characteristic: gametocytes

text: Burkina Faso

characteristic: geographic location (country and/or sea)

text: Anopheles gambiae

characteristic: host scientific name

text: Anopheles gambiae

text: Anopheles gambiae

characteristic: organism

text: sample

text: Anopheles gambiae

text: Female

text: Midgut

characteristic: title

text: Mock control


C-PBS

characteristic: External Id

text: Institut Pasteur de la Guyane

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: C-PBS

text: Extraction negative control (PBS)

text: Burkina Faso

text: metagenome

characteristic: isolation source

text: metagenome

characteristic: sample code

text: extraction negative control

characteristic: sample type

text: metagenome

text: Extraction negative control


characteristic: ENA-CHECKLIST

text: Institut Pasteur de la Guyane

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: African malaria mosquito

text: Microbiota of An. gambiae sl mosquitoes fed with blood containing gametocyes, treated with amoxicillin/clavulinic acid and collected 24h post blood feeding

characteristic: description

text: Adult

characteristic: dev stage

text: gametocytes

text: Burkina Faso

text: Anopheles gambiae sl

text: Anopheles sp.

text: Anopheles gambiae

text: sample

text: Anopheles gambiae

text: Female

characteristic: sex

text: Midgut

characteristic: tissue lib

text: Amox/Clav

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institut Pasteur de la Guyane

text: public

text: African malaria mosquito

characteristic: common name

text: Microbiota of An. gambiae sl mosquitoes fed with blood containing gametocyes, treated with amoxicillin and collected 24h post blood feeding

text: Adult

characteristic: donor

text: gametocytes

characteristic: gametocytes

text: Burkina Faso

characteristic: geographic location (country and/or sea)

text: Anopheles gambiae sl

characteristic: host scientific name

text: Anopheles sp.

text: Anopheles gambiae

characteristic: organism

text: sample

text: Anopheles gambiae

text: Female

text: Midgut

characteristic: title

text: Amox


characteristic: ENA-CHECKLIST

text: Institut Pasteur de la Guyane

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: African malaria mosquito

text: Microbiota of An. gambiae sl mosquitoes fed with blood containing gametocyes, collected 24h post blood feeding (no antibiotic)

text: Adult

text: gametocytes

text: Burkina Faso

text: Anopheles gambiae sl

text: Anopheles sp.

characteristic: isolation source

text: Anopheles gambiae

characteristic: sample code

text: sample

characteristic: sample type

text: Anopheles gambiae

text: Female

text: Midgut

text: Mock control


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institut Pasteur de la Guyane

text: public

characteristic: collection date

text: African malaria mosquito

characteristic: common name

text: Microbiota of An. gambiae sl mosquitoes fed with blood containing gametocyes, treated with amoxicillin/clavulinic acid and collected 72h post blood feeding

characteristic: description

text: Adult

characteristic: dev stage

text: gametocytes

text: Burkina Faso

text: Anopheles gambiae sl

text: Anopheles sp.

text: Anopheles gambiae

text: sample

text: Anopheles gambiae

text: Female

characteristic: sex

text: Midgut

characteristic: tissue lib

text: Amox/Clav

characteristic: treatment


characteristic: ENA-CHECKLIST

text: Institut Pasteur de la Guyane

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Microbiota of An. coluzzii mosquitoes fed with blood containing gametocyes, treated with amoxicillin and collected 72h post blood feeding

text: Adult

characteristic: donor

text: gametocytes

characteristic: gametocytes

text: Burkina Faso

characteristic: geographic location (country and/or sea)

text: Anopheles coluzzii

characteristic: host scientific name

text: Anopheles coluzzii

text: Anopheles coluzzii

characteristic: organism

text: sample

text: Anopheles coluzzii

text: Female

text: Midgut

characteristic: title

text: Amox


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institut Pasteur de la Guyane

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: African malaria mosquito

text: Microbiota of An. gambiae sl mosquitoes fed with blood containing gametocyes, collected 72h post blood feeding (no antibiotic)

text: Adult

text: gametocytes

text: Burkina Faso

text: Anopheles gambiae sl

text: Anopheles sp.

characteristic: isolation source

text: Anopheles gambiae

characteristic: sample code

text: sample

characteristic: sample type

text: Anopheles gambiae

text: Female

text: Midgut

text: Microbiota of Anopheles gambiae sl mosquitoes reared in field-like conditions

text: Mock control


A-PBS

characteristic: ENA-CHECKLIST

text: Institut Pasteur de la Guyane

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: A-PBS

text: Extraction negative control (PBS)

characteristic: description

text: Burkina Faso

text: metagenome

text: metagenome

text: extraction negative control

text: metagenome

text: Extraction negative control


text: Institut Pasteur de la Guyane

text: public

text: African malaria mosquito

characteristic: common name

text: Microbiota of An. gambiae mosquitoes fed with blood not containing gametocyes, treated with amoxicillin/clavulinic acid and collected 24h post blood feeding

text: Adult

characteristic: dev stage

characteristic: donor

text: no gametocytes

characteristic: gametocytes

text: Burkina Faso

characteristic: geographic location (country and/or sea)

text: Anopheles gambiae

characteristic: host scientific name

text: Anopheles gambiae

text: Anopheles gambiae

characteristic: organism

text: sample

text: Anopheles gambiae

text: Female

characteristic: sex

text: Midgut

characteristic: tissue lib

text: Amox/Clav

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institut Pasteur de la Guyane

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Microbiota of An. arabiensis mosquitoes fed with blood not containing gametocyes, treated with amoxicillin and collected 24h post blood feeding

text: Adult

text: no gametocytes

text: Burkina Faso

text: Anopheles arabiensis

text: Anopheles arabiensis

characteristic: isolation source

text: Anopheles arabiensis

characteristic: sample code

text: sample

text: Anopheles arabiensis

text: Female

text: Midgut

characteristic: title

text: Amox


characteristic: ENA-CHECKLIST

text: Institut Pasteur de la Guyane

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: African malaria mosquito

characteristic: common name

text: Microbiota of An. gambiae mosquitoes fed with blood not containing gametocyes, treated with amoxicillin and collected 24h post blood feeding

characteristic: description

text: Adult

characteristic: dev stage

characteristic: donor

text: no gametocytes

characteristic: gametocytes

text: Burkina Faso

text: Anopheles gambiae

text: Anopheles gambiae

text: Anopheles gambiae

text: sample

characteristic: sample type

text: Anopheles gambiae

text: Female

text: Midgut

text: Amox


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institut Pasteur de la Guyane

text: public

characteristic: INSDC status

text: African malaria mosquito

text: Microbiota of An. gambiae mosquitoes fed with blood not containing gametocyes, collected 24h post blood feeding (no antibiotic)

text: Adult

text: no gametocytes

text: Burkina Faso

characteristic: geographic location (country and/or sea)

text: Anopheles gambiae

characteristic: host scientific name

text: Anopheles gambiae

text: Anopheles gambiae

characteristic: organism

text: sample

text: Anopheles gambiae

text: Female

characteristic: sex

text: Midgut

characteristic: tissue lib

text: Mock control

characteristic: treatment


characteristic: ENA-CHECKLIST

text: Institut Pasteur de la Guyane

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Adult

text: no gametocytes

text: Burkina Faso

text: Anopheles arabiensis

text: Anopheles arabiensis

characteristic: isolation source

text: Anopheles arabiensis

characteristic: sample code

text: sample

text: Anopheles arabiensis

text: Female

text: Midgut

characteristic: title

text: Mock control


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institut Pasteur de la Guyane

text: public

characteristic: INSDC status

text: African malaria mosquito

characteristic: common name

text: Microbiota of An. gambiae mosquitoes fed with blood not containing gametocyes, treated with amoxicillin/clavulinic acid and collected 72h post blood feeding

characteristic: description

text: Adult

characteristic: dev stage

characteristic: donor

text: no gametocytes

characteristic: gametocytes

text: Burkina Faso

text: Anopheles gambiae

text: Anopheles gambiae

text: Anopheles gambiae

text: sample

characteristic: sample type

text: Anopheles gambiae

text: Female

text: Midgut

text: Amox/Clav


characteristic: ENA-CHECKLIST

text: Institut Pasteur de la Guyane

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Microbiota of An. arabiensis mosquitoes fed with blood not containing gametocyes, treated with amoxicillin/clavulinic acid and collected 72h post blood feeding

text: Adult

text: no gametocytes

text: Burkina Faso

characteristic: geographic location (country and/or sea)

text: Anopheles arabiensis

characteristic: host scientific name

text: Anopheles arabiensis

text: Anopheles arabiensis

characteristic: organism

text: sample

text: Anopheles arabiensis

text: Female

characteristic: sex

text: Midgut

characteristic: tissue lib

text: Amox/Clav

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institut Pasteur de la Guyane

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Microbiota of An. arabiensis mosquitoes fed with blood not containing gametocyes, treated with amoxicillin and collected 72h post blood feeding

text: Adult

text: no gametocytes

text: Burkina Faso

text: Anopheles arabiensis

text: Anopheles arabiensis

characteristic: isolation source

text: Anopheles arabiensis

characteristic: sample code

text: sample

text: Anopheles arabiensis

text: Female

text: Midgut

characteristic: title

text: Amox


characteristic: ENA-CHECKLIST

text: Institut Pasteur de la Guyane

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Microbiota of An. coluzzii mosquitoes fed with blood not containing gametocyes, treated with amoxicillin and collected 72h post blood feeding

characteristic: description

text: Adult

characteristic: dev stage

characteristic: donor

text: no gametocytes

characteristic: gametocytes

text: Burkina Faso

text: Anopheles coluzzii

text: Anopheles coluzzii

text: Anopheles coluzzii

text: sample

characteristic: sample type

text: Anopheles coluzzii

text: Female

text: Midgut

text: Amox


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institut Pasteur de la Guyane

text: public

text: African malaria mosquito

characteristic: common name

text: Microbiota of An. gambiae sl mosquitoes fed with blood not containing gametocyes, treated with amoxicillin and collected 72h post blood feeding

text: Adult

text: no gametocytes

text: Burkina Faso

characteristic: geographic location (country and/or sea)

text: Anopheles gambiae sl

characteristic: host scientific name

text: Anopheles sp.

text: Anopheles gambiae

characteristic: organism

text: sample

text: Anopheles gambiae

text: Female

characteristic: sex

text: Midgut

characteristic: tissue lib

text: Amox

characteristic: treatment


characteristic: ENA-CHECKLIST

text: Institut Pasteur de la Guyane

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: African malaria mosquito

text: Microbiota of An. gambiae mosquitoes fed with blood not containing gametocyes, treated with amoxicillin and collected 72h post blood feeding

text: Adult

text: no gametocytes

text: Burkina Faso

text: Anopheles gambiae

text: Anopheles gambiae

characteristic: isolation source

text: Anopheles gambiae

characteristic: sample code

text: sample

text: Anopheles gambiae

text: Female

text: Midgut

characteristic: title

text: Amox


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institut Pasteur de la Guyane

characteristic: INSDC last update

text: public

text: African malaria mosquito

characteristic: common name

text: Microbiota of An. gambiae mosquitoes fed with blood not containing gametocyes, collected 72h post blood feeding (no antibiotic)

characteristic: description

text: Adult

characteristic: dev stage

characteristic: donor

text: no gametocytes

characteristic: gametocytes

text: Burkina Faso

text: Anopheles gambiae

text: Anopheles gambiae

text: Anopheles gambiae

text: sample

characteristic: sample type

text: Anopheles gambiae

text: Female

text: Midgut

text: Mock control