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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

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text: not provided

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text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Louth

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/LH-NVRL-S21IRL00583697/2021

characteristic: title


status: PUBLIC

tag: attribute

text: NVRL

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text: National Virus Reference Laboratory

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text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Kildare

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text: human

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text: NVRL

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text: Europe / Ireland / Kilkenny

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text: Europe / Ireland / Kilkenny

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text: human

text: not provided

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text: NVRL

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text: Europe / Ireland / Kilkenny

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text: human

text: not provided

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text: Europe / Ireland / Kilkenny

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text: NVRL

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text: Europe / Ireland / Tipperary

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text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

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text: Europe / Ireland / Kilkenny

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characteristic: title


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text: National Virus Reference Laboratory

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characteristic: common name

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text: Europe / Ireland / Kilkenny

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text: National Virus Reference Laboratory

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characteristic: title


text: NVRL

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characteristic: common name

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text: Europe / Ireland / Tipperary

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characteristic: title


text: NVRL

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text: Europe / Ireland / Kilkenny

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text: National Virus Reference Laboratory

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text: not provided

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characteristic: title


text: NVRL

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characteristic: common name

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characteristic: geographic location (country and/or sea)

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text: Europe / Ireland / Louth

characteristic: geographic location (region and locality)

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text: hCoV-19/Ireland/LH-NVRL-S21IRL00583626/2021

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text: not provided

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text: hCoV-19/Ireland/KK-NVRL-S21IRL00583646/2021

characteristic: title


text: NVRL

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characteristic: common name

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characteristic: geographic location (country and/or sea)

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text: Europe / Ireland / Louth

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text: National Virus Reference Laboratory

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text: not provided

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text: Europe / Ireland / Kilkenny

text: human

text: not provided

text: not provided

text: Homo sapiens

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characteristic: title


text: NVRL

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characteristic: common name

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characteristic: geographic location (country and/or sea)

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text: Europe / Ireland / Louth

characteristic: geographic location (region and locality)

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text: hCoV-19/Ireland/LH-NVRL-S21IRL00583854/2021

characteristic: virus identifier


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text: Europe / Ireland / Kilkenny

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text: not provided

text: not provided

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characteristic: title


text: NVRL

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text: National Virus Reference Laboratory

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text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Louth

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

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characteristic: isolation source host associated

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text: hCoV-19/Ireland/LH-NVRL-S21IRL00583678/2021

characteristic: virus identifier


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Kildare

text: human

text: not provided

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text: Homo sapiens

text: male

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characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

text: hCoV-19/Ireland/KE-NVRL-S21IRL00583098/2021

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

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characteristic: common name

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text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Kilkenny

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text: human

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text: not provided

characteristic: host health state

text: Homo sapiens

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text: male

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text: not provided

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text: active surveillance in response to outbreak

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text: National Virus Reference Laboratory

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text: not provided

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text: Europe / Ireland / Kildare

text: human

text: not provided

text: not provided

text: Homo sapiens

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text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/KE-NVRL-S21IRL00583103/2021

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

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characteristic: common name

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text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Kilkenny

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text: human

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text: not provided

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text: Homo sapiens

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text: female

characteristic: host sex

text: not provided

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text: hCoV-19/Ireland/KK-NVRL-S21IRL00583725/2021

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text: not provided

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text: Europe / Ireland / Kilkenny

text: human

text: not provided

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text: Homo sapiens

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characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/KK-NVRL-S21IRL00583858/2021

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

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characteristic: common name

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text: Ireland

characteristic: geographic location (country and/or sea)

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characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: Homo sapiens

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text: female

characteristic: host sex

text: not provided

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text: hCoV-19/Ireland/TA-NVRL-S21IRL00583312/2021

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text: National Virus Reference Laboratory

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text: not provided

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text: Europe / Ireland / Kilkenny

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/KK-NVRL-S21IRL00583705/2021

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

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characteristic: common name

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text: Ireland

characteristic: geographic location (country and/or sea)

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characteristic: geographic location (longitude)

text: Europe / Ireland / Louth

characteristic: geographic location (region and locality)

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text: human

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text: not provided

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text: Homo sapiens

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text: male

characteristic: host sex

text: not provided

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text: hCoV-19/Ireland/LH-NVRL-S21IRL00583389/2021

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text: Irish Consortium for Sequencing Covid

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text: National Virus Reference Laboratory

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text: not provided

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text: Europe / Ireland / Kildare

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/KE-NVRL-S21IRL00582781/2021

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

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characteristic: common name

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text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Kildare

characteristic: geographic location (region and locality)

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text: human

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text: not provided

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text: not provided

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text: Homo sapiens

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text: male

characteristic: host sex

text: not provided

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text: hCoV-19/Ireland/KE-NVRL-S21IRL00582807/2021

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text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

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text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S21IRL00584184/2021

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

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characteristic: common name

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text: Ireland

characteristic: geographic location (country and/or sea)

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text: Europe / Ireland / Tipperary

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characteristic: host age

text: human

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text: not provided

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text: not provided

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text: Homo sapiens

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text: female

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/TA-NVRL-S21IRL00583557/2021

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text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

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text: Europe / Ireland / Tipperary

text: human

text: not provided

text: not provided

text: Homo sapiens

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text: not provided

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text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/TA-NVRL-S21IRL00583298/2021

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

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characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: not provided

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text: Homo sapiens

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text: male

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text: not provided

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text: hCoV-19/Ireland/TA-NVRL-S21IRL00583754/2021

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text: National Virus Reference Laboratory

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text: not provided

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text: Europe / Ireland / Louth

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

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text: Oro-Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

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characteristic: title


text: NVRL

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text: National Virus Reference Laboratory

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characteristic: common name

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characteristic: geographic location (country and/or sea)

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text: Europe / Ireland / Tipperary

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text: human

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text: not provided

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text: not provided

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text: Human coronavirus 2019

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text: human

text: not provided

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text: Homo sapiens

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text: not provided

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text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/KE-NVRL-S21IRL00583072/2021

characteristic: title


text: NVRL

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text: National Virus Reference Laboratory

text: not provided

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characteristic: common name

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Kilkenny

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: male

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text: not provided

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text: hCoV-19/Ireland/KK-NVRL-S21IRL00583408/2021

characteristic: virus identifier


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text: not provided

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text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/LH-NVRL-S21IRL00583594/2021

characteristic: title


text: NVRL

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text: National Virus Reference Laboratory

text: not provided

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characteristic: common name

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text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Kildare

characteristic: geographic location (region and locality)

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text: human

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text: not provided

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text: hCoV-19/Ireland/KE-NVRL-S21IRL00583106/2021

characteristic: virus identifier


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text: National Virus Reference Laboratory

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text: not provided

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text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/LH-NVRL-S21IRL00583382/2021

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

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text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Louth

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: Homo sapiens

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text: male

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text: not provided

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text: hCoV-19/Ireland/LH-NVRL-S21IRL00583597/2021

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text: National Virus Reference Laboratory

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text: not provided

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text: Europe / Ireland / Offaly

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text: not provided

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text: Homo sapiens

text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/OY-NVRL-S21IRL00584135/2021

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

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characteristic: common name

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text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

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text: human

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text: hCoV-19/Ireland/TA-NVRL-S21IRL00583282/2021

characteristic: virus identifier


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text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

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text: Europe / Ireland / Kilkenny

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/KK-NVRL-S21IRL00583504/2021

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

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characteristic: common name

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text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Kildare

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text: human

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text: Homo sapiens

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text: male

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text: not provided

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characteristic: organism

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text: hCoV-19/Ireland/KE-NVRL-S21IRL00582792/2021

characteristic: virus identifier


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text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

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text: Europe / Ireland / Kildare

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/KE-NVRL-S21IRL00582828/2021

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

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characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Kildare

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: male

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text: not provided

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text: hCoV-19/Ireland/KE-NVRL-S21IRL00582804/2021

characteristic: virus identifier


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characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

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text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Kilkenny

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

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text: NVRL

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text: Europe / Ireland / Louth

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text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S21IRL00583331/2021

characteristic: title


text: NVRL

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text: National Virus Reference Laboratory

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text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

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characteristic: geographic location (country and/or sea)

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text: Europe / Ireland / Louth

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text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-220117_os_10/2022

characteristic: title


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

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text: public

text: SIB

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220117_os_11/2022

characteristic: isolate

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characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

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characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220117_os_13/2022


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-220117_os_14/2022

text: active surveillance in response to outbreak

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Institute for Infectious Diseases, University of Bern, Switzerland

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220117_os_15/2022

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Nicole Liechti, Christian Baumann, Miguel A Terrazos Miani, Sonja Gempeler, Loïc Borcard, Stefan Neuenschwander, Cora Sägesser, Pascal Bittel, Peter Keller, Franziska Suter-Riniker, Stephen L Leib, Alban Ramette

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220117_os_16/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute for Infectious Diseases, Bern, Switzerland

text: public

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

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text: Homo sapiens

text: restricted access

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-220117_os_17/2022

characteristic: title


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220117_os_18/2022

characteristic: isolate

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characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220117_os_19/2022


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-220117_os_21/2022

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220117_os_22/2022

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220117_os_23/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-220117_os_24/2022

text: Severe acute respiratory syndrome coronavirus 2

characteristic: title


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220117_os_25/2022

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220117_os_26/2022


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-220117_os_27/2022

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220117_os_29/2022

characteristic: isolate

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Institute for Infectious Diseases, University of Bern, Switzerland

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220117_os_30/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: none/mild

characteristic: aapperio

characteristic: age

characteristic: bmi

characteristic: cigcurr

text: subgingival plaque sample 7041

characteristic: description

text: TRUE

characteristic: educ

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal surface

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-oral

characteristic: env package

text: organic material

characteristic: glucosecrc

characteristic: host age

text: UBERON:oral cavity

characteristic: host body habitat

text: UBERON:subgingival dental plaque

characteristic: host body product

text: UBERON:tooth

characteristic: host body site

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host subject id

characteristic: host taxid

text: years

characteristic: hsinsulin

characteristic: latitude

characteristic: longitude

characteristic: meanaloss

characteristic: meandbp

characteristic: meanpd

characteristic: meansbp

text: human oral metagenome

characteristic: perbop

text: restricted access

text: FALSE

text: no

characteristic: prediabetes

characteristic: raceethn

text: subgingival plaque

characteristic: sample type

text: human oral metagenome

text: female

characteristic: sex

characteristic: title

characteristic: totbop

text: disease

characteristic: type

characteristic: visit


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: none/mild

characteristic: aapperio

characteristic: age

characteristic: bmi

characteristic: cigcurr

text: subgingival plaque sample 7041

characteristic: description

text: TRUE

characteristic: educ

characteristic: elevation

text: Host-associated

text: Animal-associated

text: Animal surface

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-oral

characteristic: env package

text: organic material

characteristic: glucosecrc

characteristic: host age

text: UBERON:oral cavity

characteristic: host body habitat

text: UBERON:subgingival dental plaque

characteristic: host body product

text: UBERON:tooth

characteristic: host body site

text: human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: years

text: human oral metagenome

characteristic: organism

text: restricted access

text: FALSE

text: no

text: subgingival plaque

text: human oral metagenome

text: female

text: healthy