characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Robert Koch Institute

text: public

characteristic: SRA accession

text: Random sampling

characteristic: Sampling Strategy

text: IMS-10013-CVDP-D4BBBBCE-137F-4066-BBDC-9CDE8D818D25

characteristic: Submitter Id

text: RKI-OSEDA

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Germany

text: Europe/Germany/Berlin

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


status: PUBLIC

tag: attribute

text: Robert Koch Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Random sampling

text: IMS-10013-CVDP-500823F5-F480-4CB0-AF34-F6C8C2961DAA

tag: Namespace:Robert Koch Institute

text: RKI-OSEDA

text: Labor 28 MVZ GmbH, Mecklenburgische Straße 28; 14197 Berlin

text: not provided

characteristic: collector name

text: Germany

characteristic: geographic location (country and/or sea)

text: Europe/Germany/Berlin

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status

text: Molecular surveillance of SARS-CoV-2 in Germany

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Robert Koch Institute

text: public

characteristic: SRA accession

text: Random sampling

characteristic: Sampling Strategy

text: IMS-10013-CVDP-04FD5FAB-E48A-425F-832D-A7FE0E3FA644

characteristic: Submitter Id

text: RKI-OSEDA

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Germany

text: Europe/Germany/Berlin

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


text: Robert Koch Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Random sampling

text: IMS-10013-CVDP-891CA9B2-C79E-4BAB-9610-09520AE9B477

text: RKI-OSEDA

text: not provided

characteristic: collector name

text: Germany

characteristic: geographic location (country and/or sea)

text: Europe/Germany/Berlin

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Robert Koch Institute

text: public

text: Random sampling

text: IMS-10013-CVDP-3266A214-FAB1-4E0D-8EBB-DA45BA1A7494

text: RKI-OSEDA

text: not provided

text: Germany

text: Europe/Germany/Berlin

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


text: Robert Koch Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Random sampling

characteristic: Sampling Strategy

text: IMS-10013-CVDP-4BFE24BB-EFDA-4D85-83B7-0CFBCE6582D0

characteristic: Submitter Id

text: RKI-OSEDA

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Germany

text: Europe/Germany/Berlin

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Robert Koch Institute

text: public

text: Random sampling

text: IMS-10013-CVDP-90EB288A-A2A0-4F2D-8CF3-935DBEBC216A

text: RKI-OSEDA

text: not provided

characteristic: collector name

text: Germany

characteristic: geographic location (country and/or sea)

text: Europe/Germany/Berlin

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


text: Robert Koch Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Random sampling

text: IMS-10013-CVDP-CA0DFDD0-7705-4559-9899-DBC54FEA2BDD

text: RKI-OSEDA

text: not provided

text: Germany

text: Europe/Germany/Berlin

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Robert Koch Institute

text: public

characteristic: SRA accession

text: Random sampling

characteristic: Sampling Strategy

text: IMS-10013-CVDP-5265C4FC-8797-4285-815B-8765C24E267F

characteristic: Submitter Id

text: RKI-OSEDA

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Germany

text: Europe/Germany/Berlin

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


text: Robert Koch Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Random sampling

text: IMS-10013-CVDP-9C0E9C7A-B07C-4188-982A-3B58780FD04E

text: RKI-OSEDA

text: not provided

characteristic: collector name

text: Germany

characteristic: geographic location (country and/or sea)

text: Europe/Germany/Berlin

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Robert Koch Institute

text: public

text: Random sampling

text: IMS-10013-CVDP-D912071A-A1BD-411D-BD99-1D3A10C76DC8

text: RKI-OSEDA

text: not provided

text: Germany

text: Europe/Germany/Berlin

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


text: Robert Koch Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Random sampling

characteristic: Sampling Strategy

text: IMS-10013-CVDP-648A3840-4B30-4963-8717-2EC41CF8EF2D

characteristic: Submitter Id

text: RKI-OSEDA

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Germany

text: Europe/Germany/Berlin

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Robert Koch Institute

text: public

text: Random sampling

text: IMS-10013-CVDP-C2DFAB4A-27F7-4D03-83C3-A1613B2B5964

text: RKI-OSEDA

text: not provided

characteristic: collector name

text: Germany

characteristic: geographic location (country and/or sea)

text: Europe/Germany/Berlin

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


text: Robert Koch Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Random sampling

text: IMS-10013-CVDP-433FAB72-BEBF-45CE-92FC-6DF3AD6E6A82

text: RKI-OSEDA

text: not provided

text: Germany

text: Europe/Germany/Berlin

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Robert Koch Institute

text: public

characteristic: SRA accession

text: Random sampling

characteristic: Sampling Strategy

text: IMS-10013-CVDP-1717E40E-1814-4F1A-84AD-64F467EB2992

characteristic: Submitter Id

text: RKI-OSEDA

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Germany

text: Europe/Germany/Berlin

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


text: Robert Koch Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: IMS-10150-CVDP-245E7DAA-93A6-444E-A22C-92F050EB59CC

text: RKI-OSEDA

text: SYNLAB MVZ Leinfelden-Echterdingen, Nikolaus-Otto-Str. 6; 70771 Leinfelden-Echterdingen

text: not provided

characteristic: collector name

text: Germany

characteristic: geographic location (country and/or sea)

text: Europe/Germany/Baden-Wurttemberg

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: public

tag: Namespace:Laboratorio di Microbiologia, Dipartimento di Medicina di Laboratorio EOLAB, Ente Ospedaliero Cantonale, Bellinzona, Switzerland

text: SIB

text: Laboratorio di Diagnostica Molecolare SA Lugano, c/o Cardiocentro Ticino

text: Martinetti Lucchini Gladys, Valeria Spina

text: Switzerland

text: TI

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/TI-EOC-26163420/2021

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status

characteristic: title


text: Laboratorio di Microbiologia, Dipartimento di Medicina di Laboratorio EOLAB, Ente Ospedaliero Cantonale, Bellinzona, Switzerland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

text: TI

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/TI-EOC-26188247/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: public

text: SIB

text: Switzerland

characteristic: geographic location (country and/or sea)

text: TI

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/TI-EOC-26188249/2021


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

text: Switzerland

text: TI

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/TI-EOC-26188256/2021

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Instituto Gulbenkian de Ciencia

text: public

characteristic: SRA accession

tag: Namespace:Instituto Gulbenkian de Ciencia

characteristic: Submitter Id

unit: week

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: Protocols: Whole livers of overnight fasted non-infected, Pcc infected (day 7 of infection and heme treated (15hrs after injection) C57BL6 mice were harvested, smashed into a soup, snap frozen in liquid nitrogen and stored at -80oC. We used fasted mice as controls to account for transcriptional changes owing to anorexia of infection, since heme injection and Pcc-infection induce anorexia. Total RNA was extracted from mouse tissues using tripleXtractor reagent (Grisp), chloroform (Merk) and with the NucleoSpin RNA kit (Machery-Nagel), while following the manufacturer’s instructions. We generated full-length cDNAs and sequencing libraries following the SMART-Seq2 protocol. After cDNA synthesis and QC check of cDNAs (Agilent Technologies), library preparation including ‘tagmentation’ of cDNA, PCR-mediated adaptor addition and amplification of the adapted libraries, was done following the Nextera library preparation protocol.

characteristic: description

text: adult

characteristic: developmental stage

text: normal chow

characteristic: diet

text: wild type genotype

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: liver

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain


text: Instituto Gulbenkian de Ciencia

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: house mouse

text: adult

text: fasting

text: wild type genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: liver

text: Mus musculus

text: male

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Instituto Gulbenkian de Ciencia

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: blood cell

characteristic: cell type

text: house mouse

text: Protocols: Blood was collected from G6pC1 fl/fl or G6pc1 AlbΔ/Δ mice at the peak of infection (i.e. day 7) with a transgenic Pcc AS expressing GFP. Samples were diluted 1:7.5 in 1xPBS and iRBCs were sorted according FSC, SSC and GFP on a BD FACS Aria Ilu. Cells were washed twice with 1x PBS, counted, and adjusted to a concentration of 1200 cells/μL. Cell suspensions were processed with Chromium™ Single Cell Controller to generate barcoded single-cell gel bead emulsions (GEMs) following the Chromium Next GEM Single Cell 3ʹ protocol. The single-cell cDNA libraries were obtained after the GEM-RT (reverse- transcriptase) clean-up and cDNA amplification on a BioRad C1000 Touch™. Thermal Cycler with the following PCR thermal program: 1) 98 ºC for 3 min, 2) 98 ºC for 15 sec, 3) 63 ºC for 20 sec, 4) 72 ºC for 1 min, (Steps 2 to 4 cycled 11 x), 5) 72 ºC for 1 min and 6) 4 ºC Hold. The cDNA profiles were checked on a Fragment Analyzer System (Agilent Technologies) according to the HS NGS Fragment kit (Agilent Technologies) manual. The scRNA-seq libraries were generated from 10μl (25%) of the single-cell cDNA sample and indexed with the Chromium i7 Multiplex Kit (10x Genomics) on a BioRad C1000 Touch™ Thermal Cycler as follows: 1) 98 ºC for 45 sec, 2) 98 ºC for 20 sec, 3) 54 ºC for 30 sec, 4) 72 ºC for 20 sec, (Steps 2 to 4 cycled 15 x), 5) 72 ºC for 1 min and 6) 4 ºC Hold. The final 3’ Gene Expression libraries were verified and quanti fied on a TapeStation 4200 using the D1000 ScreenTape kit.

text: adult

text: Sa CreERT2/Wt G6pc1 Δ/Δ

text: GFP-positive

characteristic: immunophenotype

text: Plasmodium chabaudi chabaudi AS expressing GFP

characteristic: infect

text: Mus musculus

text: Mus musculus

text: blood

text: Mus musculus

text: female

text: Cre


text: Instituto Gulbenkian de Ciencia

text: public

characteristic: age

text: ArrayExpress

characteristic: broker name

text: blood cell

text: house mouse

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: G6pc1 fl/fl

characteristic: genotype

text: GFP-positive

text: Mus musculus

text: Mus musculus

text: blood

characteristic: organism part

text: Mus musculus

text: female

characteristic: sex

text: Lox


characteristic: ENA-CHECKLIST

characteristic: GISAID Accession ID

text: University Hospital Basel

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:University Hospital Basel

text: SIB

text: Clinical Virology, University Hospital Basel, Basel, Switzerland

characteristic: collecting institution

characteristic: collection date

text: Tim Roloff, Fanny Wegner, Helena MB Seth-Smith, Alfredo Mari, Karoline Leuzinger, Julia Bielicki, Manuel Battegay, Hans Hirsch, Adrian Egli

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: AG

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/AG-UHB-43008591/2021

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: Dr. Risch

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

tag: Namespace:Dr. Risch

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Labormedizinisches Zentrum Dr Risch, Liebefeld, Switzerland

text: Nadia Wohlwend, Faina Wehrli, Dominique Fabien Hilti, Sinem Kas, Martin Risch, Thomas Bodmer, Lorenz Risch

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-Risch-2182601132/2021


text: Dr. Risch

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-Risch-2183004616/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Dr. Risch

text: public

text: SIB

text: Switzerland

text: FR

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/FR-Risch-2183000462/2021

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: GISAID Accession ID

text: Dr. Risch

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-Risch-2183000437/2021

text: Severe acute respiratory syndrome coronavirus 2


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Dr. Risch

text: public

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: AG

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/AG-Risch-2183000488/2021

text: active surveillance in response to outbreak


characteristic: GISAID Accession ID

text: Dr. Risch

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-Risch-2183004596/2021

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Dr. Risch

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: FR

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/FR-Risch-2182605676/2021


characteristic: GISAID Accession ID

text: Dr. Risch

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-Risch-2183004635/2021


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Dr. Risch

text: public

text: SIB

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-Risch-2183007922/2021

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: GISAID Accession ID

text: Dr. Risch

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: SO

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/SO-Risch-2183000474/2021


E-MTAB-10943:Sample 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bioinformatician

text: public

text: E-MTAB-10943:Sample 1

text: ArrayExpress

text: BeWo

characteristic: cell line

text: trophoblast cell

characteristic: cell type

text: human

characteristic: common name

text: Protocols: RNA Sequencing was performed using BeWo choriocarcinoma cells. Cells were treated with the ER-stress induce, thapsigargin (concentration is 100 nM. As thapsigargin was dissolved in DMSO and was at 1 mM stock, therefore, 0.01% DMSO was added as vehicle control.) or vehicle in a paired design for 24 hour in serum-free modified DMEM/F12 medium containing 5.5 mM glucose. This was repeated using 5 independent replicate cultures (so 10 cultures in total). thapsigargin (Tg) with/without treatment for BeWo cells Nucleic acid extraction protocol: RNeasy Plus Mini Kit (catalog no. 74134; Qiagen) was used to isolate total RNA following manufacturer’s instruction. Illumina TruSeq Stranded mRNA Library Kit

characteristic: description

text: adult

characteristic: developmental stage

text: choriocarcinoma

characteristic: disease

text: wild type genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

characteristic: organism part

text: Homo sapiens

text: Sample 1


E-MTAB-10943:Sample 10

text: Bioinformatician

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10943:Sample 10

text: ArrayExpress

text: BeWo

text: trophoblast cell

text: human

text: adult

text: choriocarcinoma

text: wild type genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 10

characteristic: title


E-MTAB-10943:Sample 11

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Bioinformatician

text: public

text: E-MTAB-10943:Sample 11

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: BeWo

text: trophoblast cell

text: human

text: adult

text: choriocarcinoma

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 11


E-MTAB-10943:Sample 12

characteristic: External Id

text: Bioinformatician

text: public

text: E-MTAB-10943:Sample 12

text: ArrayExpress

text: BeWo

characteristic: cell line

text: trophoblast cell

characteristic: cell type

text: human

characteristic: common name

characteristic: description

text: adult

text: choriocarcinoma

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 12


E-MTAB-10943:Sample 13

text: Bioinformatician

characteristic: INSDC center name

text: public

text: E-MTAB-10943:Sample 13

text: ArrayExpress

text: BeWo

text: trophoblast cell

text: human

text: adult

characteristic: developmental stage

text: choriocarcinoma

characteristic: disease

text: wild type genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

characteristic: organism part

text: Homo sapiens

text: Sample 13


E-MTAB-10943:Sample 14

text: Bioinformatician

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10943:Sample 14

text: ArrayExpress

text: BeWo

text: trophoblast cell

text: human

text: adult

text: choriocarcinoma

text: wild type genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 14


E-MTAB-10943:Sample 15

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Bioinformatician

text: public

text: E-MTAB-10943:Sample 15

characteristic: Submitter Id

text: ArrayExpress

text: BeWo

text: trophoblast cell

text: human

text: adult

text: choriocarcinoma

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 15

characteristic: title


E-MTAB-10943:Sample 16

characteristic: External Id

text: Bioinformatician

text: public

text: E-MTAB-10943:Sample 16

text: ArrayExpress

characteristic: broker name

text: BeWo

characteristic: cell line

text: trophoblast cell

characteristic: cell type

text: human

characteristic: common name

text: adult

text: choriocarcinoma

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 16


E-MTAB-10943:Sample 17

text: Bioinformatician

characteristic: INSDC center name

text: public

text: E-MTAB-10943:Sample 17

text: ArrayExpress

text: BeWo

text: trophoblast cell

text: human

characteristic: description

text: adult

characteristic: developmental stage

text: choriocarcinoma

characteristic: disease

text: wild type genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 17


E-MTAB-10943:Sample 18

text: Bioinformatician

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10943:Sample 18

text: ArrayExpress

text: BeWo

text: trophoblast cell

text: human

text: adult

text: choriocarcinoma

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

characteristic: organism part

text: Homo sapiens

text: Sample 18


E-MTAB-10943:Sample 19

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Bioinformatician

text: public

text: E-MTAB-10943:Sample 19

characteristic: Submitter Id

text: ArrayExpress

text: BeWo

text: trophoblast cell

text: human

text: adult

text: choriocarcinoma

text: wild type genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 19


E-MTAB-10943:Sample 2

characteristic: External Id

text: Bioinformatician

text: public

text: E-MTAB-10943:Sample 2

text: ArrayExpress

characteristic: broker name

text: BeWo

characteristic: cell line

text: trophoblast cell

characteristic: cell type

text: human

text: adult

text: choriocarcinoma

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 2

characteristic: title


E-MTAB-10943:Sample 20

text: Bioinformatician

characteristic: INSDC center name

text: public

text: E-MTAB-10943:Sample 20

text: ArrayExpress

text: BeWo

text: trophoblast cell

text: human

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: choriocarcinoma

characteristic: disease

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 20


E-MTAB-10943:Sample 21

text: Bioinformatician

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10943:Sample 21

text: ArrayExpress

text: BeWo

text: trophoblast cell

text: human

text: adult

text: choriocarcinoma

text: wild type genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 21


E-MTAB-10943:Sample 22

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Bioinformatician

text: public

text: E-MTAB-10943:Sample 22

characteristic: Submitter Id

text: ArrayExpress

text: BeWo

text: trophoblast cell

text: human

text: adult

text: choriocarcinoma

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

characteristic: organism part

text: Homo sapiens

text: Sample 22


E-MTAB-10943:Sample 23

characteristic: External Id

text: Bioinformatician

text: public

text: E-MTAB-10943:Sample 23

text: ArrayExpress

characteristic: broker name

text: BeWo

characteristic: cell line

text: trophoblast cell

characteristic: cell type

text: human

text: adult

text: choriocarcinoma

text: wild type genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 23


E-MTAB-10943:Sample 24

text: Bioinformatician

characteristic: INSDC center name

text: public

text: E-MTAB-10943:Sample 24

text: ArrayExpress

text: BeWo

text: trophoblast cell

text: human

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: choriocarcinoma

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 24

characteristic: title


E-MTAB-10943:Sample 25

text: Bioinformatician

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10943:Sample 25

text: ArrayExpress

text: BeWo

text: trophoblast cell

text: human

text: adult

text: choriocarcinoma

characteristic: disease

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 25


E-MTAB-10943:Sample 26

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Bioinformatician

text: public

text: E-MTAB-10943:Sample 26

characteristic: Submitter Id

text: ArrayExpress

text: BeWo

text: trophoblast cell

text: human

text: adult

text: choriocarcinoma

text: wild type genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 26


E-MTAB-10943:Sample 27

characteristic: External Id

text: Bioinformatician

text: public

text: E-MTAB-10943:Sample 27

text: ArrayExpress

characteristic: broker name

text: BeWo

characteristic: cell line

text: trophoblast cell

characteristic: cell type

text: human

text: adult

text: choriocarcinoma

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

characteristic: organism part

text: Homo sapiens

text: Sample 27


E-MTAB-10943:Sample 28

text: Bioinformatician

characteristic: INSDC center name

text: public

text: E-MTAB-10943:Sample 28

text: ArrayExpress

text: BeWo

text: trophoblast cell

text: human

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: choriocarcinoma

text: wild type genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 28


E-MTAB-10943:Sample 29

text: Bioinformatician

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10943:Sample 29

text: ArrayExpress

text: BeWo

text: trophoblast cell

text: human

text: adult

text: choriocarcinoma

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 29

characteristic: title


E-MTAB-10943:Sample 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Bioinformatician

text: public

text: E-MTAB-10943:Sample 3

characteristic: Submitter Id

text: ArrayExpress

text: BeWo

text: trophoblast cell

text: human

text: adult

text: choriocarcinoma

characteristic: disease

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 3


E-MTAB-10943:Sample 30

characteristic: External Id

text: Bioinformatician

text: public

text: E-MTAB-10943:Sample 30

text: ArrayExpress

characteristic: broker name

text: BeWo

characteristic: cell line

text: trophoblast cell

characteristic: cell type

text: human

text: adult

text: choriocarcinoma

text: wild type genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 30


E-MTAB-10943:Sample 31

text: Bioinformatician

characteristic: INSDC center name

text: public

text: E-MTAB-10943:Sample 31

text: ArrayExpress

text: BeWo

text: trophoblast cell

text: human

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: choriocarcinoma

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

characteristic: organism part

text: Homo sapiens

text: Sample 31


E-MTAB-10943:Sample 4

text: Bioinformatician

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10943:Sample 4

text: ArrayExpress

text: BeWo

text: trophoblast cell

text: human

text: adult

text: choriocarcinoma

text: wild type genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 4


E-MTAB-10943:Sample 5

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Bioinformatician

text: public

text: E-MTAB-10943:Sample 5

characteristic: Submitter Id

text: ArrayExpress

text: BeWo

text: trophoblast cell

text: human

text: adult

text: choriocarcinoma

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 5

characteristic: title


E-MTAB-10943:Sample 6

characteristic: External Id

text: Bioinformatician

text: public

text: E-MTAB-10943:Sample 6

text: ArrayExpress

characteristic: broker name

text: BeWo

characteristic: cell line

text: trophoblast cell

characteristic: cell type

text: human

text: adult

text: choriocarcinoma

characteristic: disease

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 6


E-MTAB-10943:Sample 7

text: Bioinformatician

characteristic: INSDC center name

text: public

text: E-MTAB-10943:Sample 7

text: ArrayExpress

text: BeWo

text: trophoblast cell

text: human

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: choriocarcinoma

text: wild type genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 7


E-MTAB-10943:Sample 8

text: Bioinformatician

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10943:Sample 8

text: ArrayExpress

text: BeWo

text: trophoblast cell

text: human

text: adult

text: choriocarcinoma

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: placenta

characteristic: organism part

text: Homo sapiens

text: Sample 8


E-MTAB-10943:Sample 9

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Bioinformatician

text: public

text: E-MTAB-10943:Sample 9

characteristic: Submitter Id

text: ArrayExpress

text: BeWo

text: trophoblast cell

text: human

text: adult

text: choriocarcinoma

text: wild type genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: placenta

text: Homo sapiens

text: Sample 9


characteristic: External Id

text: MDC-Berlin

text: public

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

text: Protocols: Tissue was removed. snap frozen in liquid nitrogene and stored at -80°C unti usage. RNA was harvested by Trizol. Sequencing libraries were generated using the Illumina TruSeq Stranded mRNA Kit and sample were processed in two pools with HiSeq 4000 in one run (1 pool - 1 lane).

text: adult

text: sepsis

text: wild type genotype

characteristic: individual

text: cecal ligation and puncture

characteristic: injury

text: Mus musculus

text: Mus musculus

text: tibialis anterior

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

characteristic: title


text: MDC-Berlin

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ArrayExpress

text: house mouse

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: sham

text: Mus musculus

text: Mus musculus

text: tibialis anterior

text: Mus musculus

text: male


E-MTAB-10983:Sample 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10983:Sample 1

tag: Namespace:Institute of Life Sciences, Nalco Square, Chandrasekharpur, Bhubaneswar, Odisha

characteristic: Submitter Id

text: ArrayExpress

characteristic: cell line

text: lymphoblast

characteristic: cell type

text: human

text: Protocols: U937 cells were procured from ATCC and maintained in RPMI (GIBCO), supplemented with 10 % FBS (GIBCO). Total RNA was extracted using RNA isolation kit (Zymoresearch) following manufacturer’s protocol. Quality and concentration was checked using a spectrophotometer (Multiskan GO, Thermo Scientific). Quality of RNA was assessed by NanoDrop™ (Thermo Scientific) and Tapestation (Aligent Technologies). RNA was quantified in a Qubit 3 Fluorimeter, using Qubit RNA HS Assay Kit 9thermo Scientific. 800 ng of total RNA with RIN values ≥ 8 were selected for library preparation using TruSeq™ stranded mRNA kit (Illumina) following manufacturer’s instructions.

text: acute monocytic leukemia

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: lung

characteristic: organism part

text: control siRNA

characteristic: rna interference

text: pleural effusion

characteristic: sampling site

text: Homo sapiens

text: Sample 1


E-MTAB-10983:Sample 2

characteristic: External Id

text: Institute of Life Sciences, Nalco Square, Chandrasekharpur, Bhubaneswar, Odisha

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10983:Sample 2

text: ArrayExpress

characteristic: broker name

text: lymphoblast

text: human

characteristic: common name

text: acute monocytic leukemia

text: Homo sapiens

text: Homo sapiens

text: lung

text: control siRNA

text: pleural effusion

text: Homo sapiens

text: Sample 2

characteristic: title


E-MTAB-10983:Sample 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-10983:Sample 3

text: ArrayExpress

text: lymphoblast

text: human

characteristic: description

text: acute monocytic leukemia

characteristic: disease

text: Homo sapiens

text: Homo sapiens

text: lung

text: control siRNA

text: pleural effusion

text: Homo sapiens

text: Sample 3


E-MTAB-10983:Sample 4

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10983:Sample 4

characteristic: Submitter Id

text: ArrayExpress

characteristic: cell line

text: lymphoblast

characteristic: cell type

text: human

text: acute monocytic leukemia

text: Homo sapiens

text: Homo sapiens

text: lung

text: control siRNA

text: pleural effusion

text: Homo sapiens

text: Sample 4


E-MTAB-10983:Sample 5

characteristic: External Id

text: public

text: E-MTAB-10983:Sample 5

text: ArrayExpress

text: lymphoblast

text: human

text: acute monocytic leukemia

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: lung

characteristic: organism part

text: SMARCD1 siRNA

characteristic: rna interference

text: pleural effusion

characteristic: sampling site

text: Homo sapiens

text: Sample 5


E-MTAB-10983:Sample 6

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10983:Sample 6

text: ArrayExpress

characteristic: broker name

text: lymphoblast

text: human

characteristic: common name

text: acute monocytic leukemia

text: Homo sapiens

text: Homo sapiens

text: lung

text: SMARCD1 siRNA

text: pleural effusion

text: Homo sapiens

text: Sample 6


E-MTAB-10983:Sample 7

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-10983:Sample 7

text: ArrayExpress

text: lymphoblast

text: human

characteristic: description

text: acute monocytic leukemia

text: Homo sapiens

text: Homo sapiens

text: lung

text: SMARCD1 siRNA

text: pleural effusion

text: Homo sapiens

text: Sample 7

characteristic: title


E-MTAB-10983:Sample 8

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10983:Sample 8

characteristic: Submitter Id

text: ArrayExpress

characteristic: cell line

text: lymphoblast

text: human

text: acute monocytic leukemia

characteristic: disease

text: Homo sapiens

text: Homo sapiens

text: lung

text: SMARCD1 siRNA

text: pleural effusion

text: Homo sapiens

text: Sample 8


E-MTAB-10994:Sample 1

characteristic: External Id

text: public

text: E-MTAB-10994:Sample 1

text: ArrayExpress

text: lymphoblast

characteristic: cell type

text: human

text: Protocols: HL-60 cells were procured from ATCC and maintained in IMDM (GIBCO), supplemented with 20 % FBS (GIBCO). Total RNA was extracted using RNA isolation kit (Zymoresearch) following manufacturer’s protocol. Quality and concentration was checked using a spectrophotometer (Multiskan GO, Thermo Scientific). Quality of RNA was assessed by NanoDrop™ (Thermo Scientific) and Tapestation (Aligent Technologies). RNA was quantified in a Qubit 3 Fluorimeter, using Qubit RNA HS Assay Kit 9thermo Scientific. 800 ng of total RNA with RIN values ≥ 8 were selected for library preparation using TruSeq™ stranded mRNA kit (Illumina) following manufacturer’s instructions.

text: acute promyelocytic leukemia

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: Sample 1


E-MTAB-10994:Sample 2

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10994:Sample 2

text: ArrayExpress

text: lymphoblast

text: human

text: acute promyelocytic leukemia

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: Sample 2


E-MTAB-10994:Sample 3

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-10994:Sample 3

text: ArrayExpress

characteristic: broker name

text: lymphoblast

text: human

characteristic: common name

text: acute promyelocytic leukemia

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: Sample 3


E-MTAB-10994:Sample 4

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-10994:Sample 4

text: ArrayExpress

text: lymphoblast

text: human

characteristic: description

text: acute promyelocytic leukemia

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: Sample 4


E-MTAB-10994:Sample 5

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10994:Sample 5

text: ArrayExpress

text: lymphoblast

text: human

text: acute promyelocytic leukemia

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: Sample 5

characteristic: title


E-MTAB-10994:Sample 6

text: public

text: E-MTAB-10994:Sample 6

characteristic: Submitter Id

text: ArrayExpress

characteristic: cell line

text: lymphoblast

text: human

text: acute promyelocytic leukemia

characteristic: disease

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: Sample 6


E-MTAB-10994:Sample 7

characteristic: External Id

text: public

text: E-MTAB-10994:Sample 7

text: ArrayExpress

text: lymphoblast

characteristic: cell type

text: human

text: acute promyelocytic leukemia

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: Sample 7


E-MTAB-10994:Sample 8

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-10994:Sample 8

text: ArrayExpress

text: lymphoblast

text: human

text: acute promyelocytic leukemia

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: Sample 8


E-MTAB-10994:Sample 9

characteristic: ENA-CHECKLIST

characteristic: INSDC last update

text: public

text: E-MTAB-10994:Sample 9

text: ArrayExpress

characteristic: broker name

text: lymphoblast

text: human

text: acute promyelocytic leukemia

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: Sample 9


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: GISAID Accession ID

text: Laboratorio di Microbiologia, Dipartimento di Medicina di Laboratorio EOLAB, Ente Ospedaliero Cantonale, Bellinzona, Switzerland

text: public

text: SIB

text: Laboratorio di Diagnostica Molecolare SA Lugano, c/o Cardiocentro Ticino

characteristic: collecting institution

characteristic: collection date

text: Martinetti Lucchini Gladys, Valeria Spina

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: TI

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/TI-EOC-26198351/2021

characteristic: isolate

characteristic: sample capture status


E-MTAB-11013:YEP rtt106-1

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11013:YEP rtt106-1

tag: Namespace:Institute of Medical Sciences, School of Medicine, Medical Sciences & Nutrition, University of Aberdeen

characteristic: Submitter Id

text: ArrayExpress

text: Protocols: For RNA-seq, cells were collected by centrifugation at 4,000 x g for 4 min. For RNA-seq analysis, cells were cultivated in YPD at 30 degrees Celsius and collected when they were in log phase growth. For ketoconazole treatment, cells grown in YPD overnight were pelleted and washed with water, resuspend in YEP to an OD600 of 0.6, incubated for 24 hours at 30 degrees Celsius, and then treated with 40 micro M ketoconazole for 15 min. at 30 degrees Celsius. For RNA-seq analysis, cells were cultivated in YPD at 30 degrees Celsius and collected when they were in log phase growth. For ketoconazole treatment, cells grown in YPD overnight were pelleted and washed with water, resuspend in YEP to an OD600 of 0.6, incubated for 24 hours at 30 degrees Celsius, and then treated with 40 micro M ketoconazole for 15 min. at 30 degrees Celsius. For RNA-seq, cells were disrupted using a bead beater and then total RNA was prepared using Macherey-Nagel NucleoSpin RNA column according to the manufacturer’s protocol. ERCC (External RNA Controls Consortium) spike in controls (Baker et al., 2005) were added to the RNA samples to be used as internal controls. Libraries were prepared with the Illumina TruSeq Stranded mRNA kit as per manufacturer's instructions.

characteristic: description

text: CBS138 Cgrtt106∆::NAT

characteristic: genotype

text: glucose starvation (YEP)

characteristic: growth condition

text: Candida glabrata

characteristic: organism

text: [Candida] glabrata

text: whole organism

characteristic: organism part

text: [Candida] glabrata

characteristic: strain

text: YEP rtt106-1

characteristic: title


E-MTAB-11013:YEP rtt106-2

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Institute of Medical Sciences, School of Medicine, Medical Sciences & Nutrition, University of Aberdeen

text: public

text: E-MTAB-11013:YEP rtt106-2

text: ArrayExpress

characteristic: broker name

text: CBS138 Cgrtt106∆::NAT

text: glucose starvation (YEP)

text: Candida glabrata

text: [Candida] glabrata

text: whole organism

text: [Candida] glabrata

text: YEP rtt106-2


E-MTAB-11013:YEP rtt106-3

characteristic: ENA-CHECKLIST

characteristic: External Id

text: public

text: E-MTAB-11013:YEP rtt106-3

text: ArrayExpress

text: CBS138 Cgrtt106∆::NAT

text: glucose starvation (YEP)

text: Candida glabrata

text: [Candida] glabrata

text: whole organism

text: [Candida] glabrata

text: YEP rtt106-3


E-MTAB-11013:YEP snf2-1

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11013:YEP snf2-1

text: ArrayExpress

text: CBS138 Cgsnf2∆::NAT

text: glucose starvation (YEP)

text: Candida glabrata

text: [Candida] glabrata

text: whole organism

text: [Candida] glabrata

text: YEP snf2-1


E-MTAB-11013:YEP snf2-2

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11013:YEP snf2-2

text: ArrayExpress

text: CBS138 Cgsnf2∆::NAT

text: glucose starvation (YEP)

text: Candida glabrata

text: [Candida] glabrata

text: whole organism

text: [Candida] glabrata

text: YEP snf2-2


E-MTAB-11013:YEP snf2-3

text: public

characteristic: SRA accession

text: E-MTAB-11013:YEP snf2-3

characteristic: Submitter Id

text: ArrayExpress

text: CBS138 Cgsnf2∆::NAT

text: glucose starvation (YEP)

text: Candida glabrata

text: [Candida] glabrata

text: whole organism

text: [Candida] glabrata

text: YEP snf2-3


E-MTAB-11013:YEP WT-1

text: public

text: E-MTAB-11013:YEP WT-1

text: ArrayExpress

characteristic: description

text: wild type genotype

characteristic: genotype

text: glucose starvation (YEP)

text: Candida glabrata

text: [Candida] glabrata

text: whole organism

text: [Candida] glabrata

text: YEP WT-1


E-MTAB-11013:YEP WT-2

text: public

text: E-MTAB-11013:YEP WT-2

text: ArrayExpress

text: wild type genotype

text: glucose starvation (YEP)

characteristic: growth condition

text: Candida glabrata

characteristic: organism

text: [Candida] glabrata

text: whole organism

text: [Candida] glabrata

text: YEP WT-2


E-MTAB-11013:YEP WT-3

text: public

text: E-MTAB-11013:YEP WT-3

text: ArrayExpress

text: wild type genotype

text: glucose starvation (YEP)

text: Candida glabrata

text: [Candida] glabrata

text: whole organism

characteristic: organism part

text: [Candida] glabrata

characteristic: strain

text: YEP WT-3


E-MTAB-11013:Ket rtt106-1

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11013:Ket rtt106-1

text: ArrayExpress

text: CBS138 Cgrtt106∆::NAT

text: glucose starvation (YEP) + ketoconazole

text: Candida glabrata

text: [Candida] glabrata

text: whole organism

text: [Candida] glabrata

text: Ket rtt106-1

characteristic: title


E-MTAB-11013:Ket rtt106-2

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-11013:Ket rtt106-2

text: ArrayExpress

characteristic: broker name

text: CBS138 Cgrtt106∆::NAT

text: glucose starvation (YEP) + ketoconazole

text: Candida glabrata

text: [Candida] glabrata

text: whole organism

text: [Candida] glabrata

text: Ket rtt106-2


E-MTAB-11013:Ket rtt106-3

characteristic: ENA-CHECKLIST

characteristic: External Id

text: public

text: E-MTAB-11013:Ket rtt106-3

text: ArrayExpress

text: CBS138 Cgrtt106∆::NAT

text: glucose starvation (YEP) + ketoconazole

text: Candida glabrata

text: [Candida] glabrata

text: whole organism

text: [Candida] glabrata

text: Ket rtt106-3


E-MTAB-11013:Ket snf2-1

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11013:Ket snf2-1

text: ArrayExpress

text: CBS138 Cgsnf2∆::NAT

text: glucose starvation (YEP) + ketoconazole

text: Candida glabrata

text: [Candida] glabrata

text: whole organism

text: [Candida] glabrata

text: Ket snf2-1


E-MTAB-11013:Ket snf2-2

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11013:Ket snf2-2

text: ArrayExpress

text: CBS138 Cgsnf2∆::NAT

text: glucose starvation (YEP) + ketoconazole

text: Candida glabrata

text: [Candida] glabrata

text: whole organism

text: [Candida] glabrata

text: Ket snf2-2


E-MTAB-11013:Ket snf2-3

text: public

characteristic: SRA accession

text: E-MTAB-11013:Ket snf2-3

characteristic: Submitter Id

text: ArrayExpress

text: CBS138 Cgsnf2∆::NAT

text: glucose starvation (YEP) + ketoconazole

text: Candida glabrata

text: [Candida] glabrata

text: whole organism

text: [Candida] glabrata

text: Ket snf2-3


E-MTAB-11013:Ket WT-1

text: public

text: E-MTAB-11013:Ket WT-1

text: ArrayExpress

characteristic: description

text: wild type genotype

characteristic: genotype

text: glucose starvation (YEP) + ketoconazole

text: Candida glabrata

text: [Candida] glabrata

text: whole organism

text: [Candida] glabrata

text: Ket WT-1


E-MTAB-11013:Ket WT-2

text: public

text: E-MTAB-11013:Ket WT-2

text: ArrayExpress

text: wild type genotype

text: glucose starvation (YEP) + ketoconazole

characteristic: growth condition

text: Candida glabrata

characteristic: organism

text: [Candida] glabrata

text: whole organism

text: [Candida] glabrata

text: Ket WT-2


E-MTAB-11013:Ket WT-3

text: public

text: E-MTAB-11013:Ket WT-3

text: ArrayExpress

text: wild type genotype

text: glucose starvation (YEP) + ketoconazole

text: Candida glabrata

text: [Candida] glabrata

text: whole organism

characteristic: organism part

text: [Candida] glabrata

characteristic: strain

text: Ket WT-3


characteristic: ENA-FIRST-PUBLIC

text: public

text: ArrayExpress

text: CBS138 Cgrtt106∆::NAT

text: log phase in YPD

text: Candida glabrata

text: [Candida] glabrata

text: whole organism

text: [Candida] glabrata

characteristic: title


characteristic: ENA-LAST-UPDATE

text: public

text: ArrayExpress

characteristic: broker name

text: CBS138 Cgsnf2∆::NAT

text: log phase in YPD

text: Candida glabrata

text: [Candida] glabrata

text: whole organism

text: [Candida] glabrata


characteristic: ENA-CHECKLIST

characteristic: External Id

text: public

text: ArrayExpress

text: wild type genotype

text: log phase in YPD

text: Candida glabrata

text: [Candida] glabrata

text: whole organism

text: [Candida] glabrata


text: NORWEGIAN VETERINARY INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: TITLE

characteristic: collection date

text: bootswab

text: Norway

characteristic: geographic location

text: poultry

characteristic: isolation source

text: Escherichia coli

text: Escherichia coli


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Latvian Biomedical Research and Study Centre

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: Norway rat

characteristic: common name

text: Protocols: After 4 weeks of regular exercise, rats underwent brief anesthesia and of blood from the tail vein was taken and immediately put into K3 EDTA tubes and centrifuged for 15 min at 2000 x g at 4 degrees C. This step was repeated for the same animals immediately after 1h of running. On the same day, a blood sample was collected from the sedentary rats following the same protocol. Plasma was collected and immediately frozen for further EV isolation. RNA was extracted from plasma EVs using miRNeasy micro kit (Qiagen, USA) according to the manufacturer’s protocol. The concentration and quality of the obtained RNA were analyzed on Agilent Bioanalyzer with Agilent RNA 6000 Pico chip (Agilent Technologies, Germany). RNA libraries were constructed using CleanTag® Small RNA Library Prep Kit (Trilink Biotechnologies, USA), the quality and concentration of obtained libraries were analyzed on Agilent Bioanalyzer using Agilent High Sensitivity DNA chip (Agilent Technologies, Germany). The libraries were cleaned using Blue Pippin DNA Size Selection with 3% gel Blue Pippin Cassette (Sage Science, USA) setting tight target length to 140 bp thus selecting fragments with size in tight range to 140 bp (133–147 bp).

characteristic: description

text: adult

characteristic: developmental stage

text: sedentary lifestyle

characteristic: environmental history

text: extracellular vesicular exosome

characteristic: fraction

text: wild type genotype

characteristic: genotype

characteristic: individual

text: not applicable

characteristic: isolate

text: Rattus norvegicus

text: Rattus norvegicus

text: blood

text: not applicable

characteristic: sampling time point

text: Rattus norvegicus

text: male

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Latvian Biomedical Research and Study Centre

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: adult

text: sedentary lifestyle

text: extracellular vesicular exosome

text: wild type genotype

text: not applicable

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: blood

characteristic: organism part

text: not applicable

text: Rattus norvegicus

text: male

characteristic: strain

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: trained on running wheel

characteristic: environmental history

text: extracellular vesicular exosome

characteristic: fraction

text: wild type genotype

text: not applicable

text: Rattus norvegicus

text: Rattus norvegicus

text: blood

text: after exercise

text: Rattus norvegicus

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: ArrayExpress

text: Norway rat

text: adult

text: trained on running wheel

text: extracellular vesicular exosome

text: wild type genotype

characteristic: genotype

characteristic: individual

text: not applicable

characteristic: isolate

text: Rattus norvegicus

text: Rattus norvegicus

text: blood

text: before exercise

characteristic: sampling time point

text: Rattus norvegicus

text: male

characteristic: sex


E-MTAB-11023:Sample 1

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11023:Sample 1

tag: Namespace:Shanghai Center for Systems Biomedicine, Shanghai Jiao Tong University, Shanghai , China

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: human

text: Protocols: A549 cells were treated with FYN, then cultured for 24 h. A total of 50,000 viable cells were used to resuspend and isolate nuclei; Then, chromatin was fragmented using Tn5 transposase and amplified.

text: non-small cell lung cancer

characteristic: disease

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: lung

characteristic: organism part

text: Homo sapiens

text: Sample 1

characteristic: title


E-MTAB-11023:Sample 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Shanghai Center for Systems Biomedicine, Shanghai Jiao Tong University, Shanghai , China

characteristic: INSDC center name

text: public

text: E-MTAB-11023:Sample 2

text: ArrayExpress

text: human

characteristic: common name

characteristic: description

text: non-small cell lung cancer

text: Homo sapiens

text: Homo sapiens

text: lung

text: Homo sapiens

text: Sample 2


text: Clinical Bioinformatics Area

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:Clinical Bioinformatics Area

text: Unidad de Microbiologia, Hospital Universitario San Cecilio, Granada, Spain

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Spain

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: active surveillance in response to outbreak

characteristic: sample capture status

text: AND04161, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SARS-CoV-2/human/Norway/NIPH-06348-1/2021

tag: Namespace:Norwegian Institute of Public Health (NIPH)

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

text: Medical Microbiology Unit, Department for Laboratory Medicine, Drammen Hospital, Vestre Viken Health Trust, ,P.O.Box 800, N-3004 Drammen, Norway

text: Kathrine Stene-Johansen, Kamilla Heddeland Instefjord, Hilde Elshaug, Garcia Llorente Ignacio, Jon Bråte, Engebretsen Serina Beate,Pedersen Benedikte Nevjen, Debech Nadia, Atiya R Ali,Marie Paulsen Madsen, Rasmus Riis Kopperud, Hilde Vollan, Karoline Bragstad, Olav Hungnes

text: Norway

text: Viken

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: title


text: Norwegian Institute of Public Health (NIPH)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SARS-CoV-2/human/Norway/NIPH-06674-1/2021

text: ELIXIR-Norway

text: Hospital of Southern Norway - Kristiansand, Department of Medical Microbiology,P.O.Box 416 Lundsiden, N-4604 Kristiansand, Norway

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Agder

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: public

characteristic: INSDC status

text: SARS-CoV-2/human/Norway/NIPH-06310-1/2021

text: ELIXIR-Norway

text: Furst Medical Laboratory,Soeren Bulls vei 25, N-1051 Oslo, Norway

text: Norway

text: Viken

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: SARS-CoV-2/human/Norway/NIPH-06720-1/2021

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

text: Norway

text: Innlandet

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: SARS-CoV-2/human/Norway/NIPH-05597-1/2021

text: ELIXIR-Norway

text: Akershus University Hospital, Department for Microbiology and Infectious Disease Control, P.O.Box 1000, N-1478 Loerenskog, Norway

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Innlandet

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: SARS-CoV-2/human/Norway/NIPH-06941-1/2021

text: ELIXIR-Norway

text: Norway

text: Viken

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: SARS-CoV-2/human/Norway/NIPH-06845-1/2021

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

text: Norway

text: Oslo

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SARS-CoV-2/human/Norway/NIPH-07122-1/2021

text: ELIXIR-Norway

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Oslo

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: SARS-CoV-2/human/Norway/NIPH-06810-1/2021

text: ELIXIR-Norway

text: Norway

text: Oslo

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: SARS-CoV-2/human/Norway/NIPH-07145-1/2021

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

text: Norway

text: Oslo

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: SARS-CoV-2/human/Norway/NIPH-06546-1/2021

text: ELIXIR-Norway

text: Haukeland University Hospital, Dept. of Microbiology,P.O.Box 1400, N-5021 Bergen, Norway

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Vestland

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: SARS-CoV-2/human/Norway/NIPH-07146-1/2021

text: ELIXIR-Norway

text: Ostfold Hospital Trust - Kalnes, Centre for Laboratory Medicine, Section for gene technology and infection serology,P.O.Box 300, N-1714 Graalum, Norway

text: Kathrine Stene-Johansen, Kamilla Heddeland Instefjord, Hilde Elshaug, Garcia Llorente Ignacio, Jon Bråte, Engebretsen Serina Beate,Pedersen Benedikte Nevjen, Debech Nadia, Atiya R Ali,Marie Paulsen Madsen, Rasmus Riis Kopperud, Hilde Vollan, Karoline Bragstad, Olav Hungnes

text: Norway

text: Viken

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Norwegian Institute of Public Health (NIPH)

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: SARS-CoV-2/human/Norway/NIPH-07148-1/2021

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

text: Norway

text: Viken

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SARS-CoV-2/human/Norway/NIPH-07149-1/2021

text: ELIXIR-Norway

text: Furst Medical Laboratory,Soeren Bulls vei 25, N-1051 Oslo, Norway

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Oslo

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: SARS-CoV-2/human/Norway/NIPH-07150-1/2021

text: ELIXIR-Norway

text: Norway

text: Viken

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: SARS-CoV-2/human/Norway/NIPH-07152-1/2021

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

text: Norway

text: Oslo

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: SARS-CoV-2/human/Norway/NIPH-07153-1/2021

text: ELIXIR-Norway

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Oslo

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: SARS-CoV-2/human/Norway/NIPH-07156-1/2021

text: ELIXIR-Norway

text: Norway

text: Oslo

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: SARS-CoV-2/human/Norway/NIPH-07158-1/2021

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

text: Norway

text: Oslo

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SARS-CoV-2/human/Norway/NIPH-07160-1/2021

text: ELIXIR-Norway

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Oslo

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: SARS-CoV-2/human/Norway/NIPH-07161-1/2021

text: ELIXIR-Norway

text: Norway

text: Viken

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: SARS-CoV-2/human/Norway/NIPH-07163-1/2021

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

text: Norway

text: Oslo

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: SARS-CoV-2/human/Norway/NIPH-07164-1/2021

text: ELIXIR-Norway

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Oslo

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: SARS-CoV-2/human/Norway/NIPH-06846-1/2021

text: ELIXIR-Norway

text: Norway

text: Viken

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: SARS-CoV-2/human/Norway/NIPH-07166-1/2021

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

text: Norway

text: Oslo

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SARS-CoV-2/human/Norway/NIPH-06943-1/2021

text: ELIXIR-Norway

text: Akershus University Hospital, Department for Microbiology and Infectious Disease Control, P.O.Box 1000, N-1478 Loerenskog, Norway

characteristic: collecting institution

characteristic: collection date

text: Kathrine Stene-Johansen, Kamilla Heddeland Instefjord, Hilde Elshaug, Garcia Llorente Ignacio, Jon Bråte, Engebretsen Serina Beate,Pedersen Benedikte Nevjen, Debech Nadia, Atiya R Ali,Marie Paulsen Madsen, Rasmus Riis Kopperud, Hilde Vollan, Karoline Bragstad, Olav Hungnes

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Viken

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

text: Norwegian Institute of Public Health (NIPH)

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: SARS-CoV-2/human/Norway/NIPH-07167-1/2021

text: ELIXIR-Norway

text: Norway

text: Viken

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: SARS-CoV-2/human/Norway/NIPH-06811-1/2021

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

text: Furst Medical Laboratory,Soeren Bulls vei 25, N-1051 Oslo, Norway

text: Norway

text: Oslo

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: SARS-CoV-2/human/Norway/NIPH-07168-1/2021

text: ELIXIR-Norway

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Viken

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: SARS-CoV-2/human/Norway/NIPH-06547-1/2021

text: ELIXIR-Norway

text: Ostfold Hospital Trust - Kalnes, Centre for Laboratory Medicine, Section for gene technology and infection serology,P.O.Box 300, N-1714 Graalum, Norway

text: Norway

text: Viken

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: SARS-CoV-2/human/Norway/NIPH-07123-1/2021

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

text: Norway

text: Viken

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SARS-CoV-2/human/Norway/NIPH-05626-1/2021

text: ELIXIR-Norway

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Viken

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: SARS-CoV-2/human/Norway/NIPH-06676-1/2021

text: ELIXIR-Norway

text: Hospital of Southern Norway - Kristiansand, Department of Medical Microbiology,P.O.Box 416 Lundsiden, N-4604 Kristiansand, Norway

text: Norway

text: Viken

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: SARS-CoV-2/human/Norway/NIPH-06351-1/2021

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

text: Medical Microbiology Unit, Department for Laboratory Medicine, Drammen Hospital, Vestre Viken Health Trust, ,P.O.Box 800, N-3004 Drammen, Norway

text: Norway

text: Viken

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: SARS-CoV-2/human/Norway/NIPH-06311-1/2021

text: ELIXIR-Norway

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Viken

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: SARS-CoV-2/human/Norway/NIPH-06721-1/2021

text: ELIXIR-Norway

text: Norway

text: Viken

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: SARS-CoV-2/human/Norway/NIPH-06847-1/2021

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

text: Kathrine Stene-Johansen, Kamilla Heddeland Instefjord, Hilde Elshaug, Garcia Llorente Ignacio, Jon Bråte, Engebretsen Serina Beate,Pedersen Benedikte Nevjen, Debech Nadia, Atiya R Ali,Marie Paulsen Madsen, Rasmus Riis Kopperud, Hilde Vollan, Karoline Bragstad, Olav Hungnes

text: Norway

text: Viken

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Norwegian Institute of Public Health (NIPH)

text: public

text: SARS-CoV-2/human/Norway/NIPH-06944-1/2021

text: ELIXIR-Norway

text: Norwegian Institute of Public Health, Department of Virology,P.O.Box 222 Skoyen, 0213 Oslo, Norway

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Viken

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: SARS-CoV-2/human/Norway/NIPH-06557-1/2021

text: ELIXIR-Norway

text: Department of Medical Microbiology, St. Olavs hospital,P.O.box 3250 Torgarden, N-7006 Trondheim, Norway

text: Norway

text: Trondelag

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: SARS-CoV-2/human/Norway/NIPH-06812-1/2021

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

text: Department of Medical Microbiology - section Molde, Molde Hospital, Parkveien 84, N-6407 Molde, Norway

text: Norway

text: More og Romsdal

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: SARS-CoV-2/human/Norway/NIPH-07169-1/2021

text: ELIXIR-Norway

text: Furst Medical Laboratory,Soeren Bulls vei 25, N-1051 Oslo, Norway

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Viken

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: SARS-CoV-2/human/Norway/NIPH-06813-1/2021

text: ELIXIR-Norway

text: Nordland Hospital - Bodo, Laboratory Department, Molecular Biology Unit,P.O.Box 1480, N-8092 Bodo, Norway

text: Norway

text: Nordland

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: SARS-CoV-2/human/Norway/NIPH-06945-1/2021

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

text: Norway

text: Viken

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SARS-CoV-2/human/Norway/NIPH-06848-1/2021

text: ELIXIR-Norway

text: Foerde Hospital, Department of Microbiology ,P.O.Box 1000, N-6807 Foerde, Norway

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Vestland

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: SARS-CoV-2/human/Norway/NIPH-06558-1/2021

text: ELIXIR-Norway

text: Haukeland University Hospital, Dept. of Microbiology,P.O.Box 1400, N-5021 Bergen, Norway

text: Norway

text: Vestland

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Norwegian Institute of Public Health (NIPH)

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: SARS-CoV-2/human/Norway/NIPH-07124-1/2021

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

text: Kathrine Stene-Johansen, Kamilla Heddeland Instefjord, Hilde Elshaug, Garcia Llorente Ignacio, Jon Bråte, Engebretsen Serina Beate,Pedersen Benedikte Nevjen, Debech Nadia, Atiya R Ali,Marie Paulsen Madsen, Rasmus Riis Kopperud, Hilde Vollan, Karoline Bragstad, Olav Hungnes

text: Norway

text: Viken

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: SARS-CoV-2/human/Norway/NIPH-06313-1/2021

text: ELIXIR-Norway

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Oslo

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: SARS-CoV-2/human/Norway/NIPH-06677-1/2021

text: ELIXIR-Norway

text: Hospital of Southern Norway - Kristiansand, Department of Medical Microbiology,P.O.Box 416 Lundsiden, N-4604 Kristiansand, Norway

text: Norway

text: Agder

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: SARS-CoV-2/human/Norway/NIPH-06723-1/2021

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

text: Norway

text: Oslo

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SARS-CoV-2/human/Norway/NIPH-06352-1/2021

text: ELIXIR-Norway

text: Akershus University Hospital, Department for Microbiology and Infectious Disease Control, P.O.Box 1000, N-1478 Loerenskog, Norway

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Viken

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: SARS-CoV-2/human/Norway/NIPH-07170-1/2021

text: ELIXIR-Norway

text: Ostfold Hospital Trust - Kalnes, Centre for Laboratory Medicine, Section for gene technology and infection serology,P.O.Box 300, N-1714 Graalum, Norway

text: Norway

text: Viken

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: SARS-CoV-2/human/Norway/NIPH-05629-1/2021

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

text: Norway

text: Viken

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: SARS-CoV-2/human/Norway/NIPH-06559-1/2021

text: ELIXIR-Norway

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Viken

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: SARS-CoV-2/human/Norway/NIPH-06946-1/2021

text: ELIXIR-Norway

text: Norway

text: Viken

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate