characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF WESTERN ONTARIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: 207.9 mg/kg

characteristic: ammonium content

characteristic: collection date

text: aquatic metagenome

characteristic: common name

text: 18S-V4 West Beach seawater, sample SWB, collected January 17 2016

characteristic: description

text: marine pelagic biome

characteristic: environment (biome)

text: coastal water body

characteristic: environment (feature)

text: sea water

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: British Columbia, Calvert Island

characteristic: geographic location (region and locality)

text: 0 m

characteristic: geographic location elevation

text: metagenome

text: 190.1 mg/kg

text: 0.5 %

text: aquatic metagenome

text: 47.5 mg/kg

text: aquatic metagenome

text: Illumina MiSeq

text: 757.2 mg/kg

text: 8.5 ºC

text: 18S-V4 West Beach SWB seawater January 17 2016


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF WESTERN ONTARIO

characteristic: INSDC center name

text: public

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF WESTERN ONTARIO

characteristic: Submitter Id

text: 200.6 mg/kg

text: aquatic metagenome

text: 18S-V4 West Beach seawater, sample SWC, collected January 17 2016

text: marine pelagic biome

text: coastal water body

text: sea water

text: Canada

unit: m

unit: DD

text: British Columbia, Calvert Island

text: 0 m

text: metagenome

characteristic: investigation type

text: miscellaneous natural or artificial environment

characteristic: miscellaneous environmental package

text: 213.2 mg/kg

characteristic: nitrate content

text: 0.52 %

characteristic: organic matter content

text: aquatic metagenome

characteristic: organism

text: 48.5 mg/kg

characteristic: phosphate content

text: Calvert Island West beach microbiome 2015

characteristic: project name

text: aquatic metagenome

characteristic: seawater or pore water pH

characteristic: seawater or pore water salinity

text: Illumina MiSeq

characteristic: sequencing method

text: 769.5 mg/kg

characteristic: sulfate content

characteristic: target subfragment

text: 8.5 ºC

characteristic: temperature (ºC)

text: 18S-V4 West Beach SWC seawater January 17 2016

characteristic: title


MLN

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Fribourg

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: MLN

tag: Namespace:University of Fribourg

text: house mouse

characteristic: common name

text: CD45- stromal compartment cells of mesenteric lymph nodes

characteristic: description

text: Mus musculus

text: Mus musculus

text: mesenteric lymph nodes

characteristic: tissue type

text: MLN


PLN

text: University of Fribourg

text: public

characteristic: SRA accession

text: PLN

characteristic: Submitter Id

text: house mouse

text: CD45- stromal compartment cells of peripheral lymph nodes

text: Mus musculus

characteristic: organism

text: Mus musculus

text: peripheral lymph nodes

text: PLN


mandLN

text: University of Fribourg

text: public

text: mandLN

text: house mouse

text: CD45- stromal compartment cells of mandibular lymph nodes

text: Mus musculus

text: Mus musculus

text: mandibular lymph nodes

text: mandLN


text: Escherichia coli

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli


text: not applicable

characteristic: ArrayExpress-SEX

text: Klebsiella pneumoniae

text: Not Applicable

characteristic: GENDER

text: SC

text: public

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: not applicable

text: Klebsiella oxytoca

characteristic: ENA-CHECKLIST

text: Not Applicable

text: SC

text: public

text: Klebsiella oxytoca

text: Klebsiella oxytoca

text: Klebsiella oxytoca

characteristic: title


text: not applicable

text: Acinetobacter baumannii

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Not Applicable

text: SC

text: public

text: Acinetobacter baumannii

text: Acinetobacter baumannii

text: Acinetobacter baumannii


text: not applicable

text: Enterobacter cloacae

characteristic: External Id

text: Not Applicable

text: SC

characteristic: INSDC center name

text: public

text: Enterobacter cloacae

text: Enterobacter cloacae

text: Enterobacter cloacae


text: not applicable

text: Escherichia coli

text: Not Applicable

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli


text: not applicable

text: Proteus mirabilis

text: Not Applicable

text: SC

text: public

characteristic: INSDC status

text: Proteus mirabilis

characteristic: common name

text: Proteus mirabilis

text: Proteus mirabilis


text: not applicable

text: KLebsiella pneumoniae

text: Not Applicable

text: SC

text: public

text: KLebsiella pneumoniae

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: not applicable

text: Providencia stuartii

text: Not Applicable

text: SC

text: public

text: Providencia stuartii

text: Providencia stuartii

text: Providencia stuartii


AO

text: public

text: AO

tag: Namespace:Julius Kuehn-Institut, German Federal Research Center for Cultivated Plant

characteristic: collection date

text: R. Bauer

characteristic: collector name

text: wheat bunt fungus

text: cultured mycelium derived from single teliospore culture

characteristic: dev stage

text: Germany

characteristic: geographic location (country and/or sea)

text: wheat

characteristic: host common name

text: Triticum aestivum

characteristic: host scientific name

text: CBS 145172

characteristic: isolate

text: Infected Host Tissue

characteristic: isolation source non-host-associated�

text: plant

characteristic: known pathogenicity

text: Tilletia caries

text: Tilletia caries

text: AO

characteristic: strain

text: single teliospore culture of Tilletia caries_AO


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Julius Kuehn-Institut, German Federal Research Center for Cultivated Plant

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: V. Weyermann

text: wheat bunt fungus

text: Switzerland

text: wheat

text: Triticum aestivum

text: CBS 145166

text: Infected Host Tissue

text: plant

text: Tilletia caries

characteristic: organism

text: Tilletia caries

text: single teliospore culture of Tilletia caries_AZH3

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: A. E. Muellner

text: dwarf bunt fungus

characteristic: common name

text: Austria

text: wheat

text: Triticum aestivum

text: CBS 145169

text: Infected Host Tissue

text: plant

text: Tilletia controversa

text: Tilletia controversa

text: single teliospore culture of Tilletia controversa_OA2


text: public

text: H. Mitterer

characteristic: collector name

text: dwarf bunt fungus

characteristic: dev stage

text: Germany

characteristic: geographic location (country and/or sea)

text: wheat

characteristic: host common name

text: Triticum aestivum

characteristic: host scientific name

text: CBS 145167

characteristic: isolate

text: Infected Host Tissue

characteristic: isolation source non-host-associated

text: plant

text: Tilletia controversa

text: Tilletia controversa

text: single teliospore culture of Tilletia controversa_OL14


OR

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: SRA accession

text: OR

characteristic: Submitter Id

text: R. Bauer

text: dwarf bunt fungus

text: Germany

text: wheat

text: Triticum aestivum

text: CBS 144827

text: Infected Host Tissue

characteristic: isolation source non-host-associated�

text: plant

characteristic: known pathogenicity

text: Tilletia controversa

text: Tilletia controversa

text: OR

characteristic: strain

text: single teliospore culture of Tilletia controversa_OR


OV

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: OV

characteristic: collection date

text: R. Bauer

text: dwarf bunt fungus

text: Germany

text: wheat

text: Triticum aestivum

text: CBS 145170

text: Infected Host Tissue

text: plant

text: Tilletia controversa

characteristic: organism

text: Tilletia controversa

text: OV

text: single teliospore culture of Tilletia controversa_OV

characteristic: title


OW

text: public

text: OW

text: R. Bauer

characteristic: collector name

text: dwarf bunt fungus

characteristic: common name

characteristic: dev stage

text: Germany

characteristic: geographic location (country and/or sea)

text: wheat

characteristic: host common name

text: Triticum aestivum

characteristic: host scientific name

text: CBS 145168

characteristic: isolate

text: Infected Host Tissue

text: plant

text: Tilletia controversa

text: Tilletia controversa

text: OW

text: single teliospore culture of Tilletia controversa_OW


LLFL

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: SRA accession

text: LLFL

characteristic: Submitter Id

text: R. Bauer

text: wheat common bunt

text: Germany

text: wheat

text: Triticum aestivum

text: CBS 144826

text: Infected Host Tissue

characteristic: isolation source non-host-associated�

text: plant

characteristic: known pathogenicity

text: Tilletia laevis

text: Tilletia laevis

text: LLFL

text: single teliospore culture of Tilletia laevis_LLFL


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

characteristic: collection date

text: R. J. Metzger, B. Goates

text: wheat common bunt

text: not provided

text: wheat

text: Triticum aestivum

text: CBS 145173

text: Infected Host Tissue

text: plant

text: Tilletia laevis

text: Tilletia laevis

characteristic: strain

text: single teliospore culture of Tilletia laevis_L-19


text: public

text: A. E. Muellner

characteristic: collector name

text: wheat bunt fungus

characteristic: common name

characteristic: dev stage

text: Austria

characteristic: geographic location (country and/or sea)

text: wheat

characteristic: host common name

text: Triticum aestivum

text: CBS 144825

text: Infected Host Tissue

text: plant

text: Tilletia caries

characteristic: organism

text: Tilletia caries

text: single teliospore culture of Tilletia caries_AA11

characteristic: title


AI

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: SRA accession

text: AI

characteristic: Submitter Id

text: V. Weyermann

text: wheat bunt fungus

text: Italy

text: wheat

text: Triticum durum

characteristic: host scientific name

text: CBS 145171

characteristic: isolate

text: Infected Host Tissue

text: plant

text: Tilletia caries

text: Tilletia caries

text: AI

text: single teliospore culture of Tilletia caries_AI


characteristic: External Id

text: GSC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: spotted hyena

text: Neron 2

characteristic: description

text: Crocuta crocuta

text: Crocuta crocuta

text: Neron 2


text: GSC

text: public

text: spotted hyena

characteristic: common name

text: Trou-du-Renard 1

text: Crocuta crocuta

text: Crocuta crocuta

text: Trou-du-Renard 1


text: GSC

text: public

text: spotted hyena

text: Chateaubourg 1

text: Crocuta crocuta

text: Crocuta crocuta

text: Chateaubourg 1


text: GSC

text: public

text: spotted hyena

text: Tournal 143

text: Crocuta crocuta

text: Crocuta crocuta

text: Tournal 143


text: GSC

text: public

text: spotted hyena

text: Figuier 1

text: Crocuta crocuta

text: Crocuta crocuta

text: Figuier 1


text: GSC

text: public

text: spotted hyena

text: Crouzade 71377

text: Crocuta crocuta

text: Crocuta crocuta

text: Crouzade 71377


text: GSC

text: public

text: spotted hyena

text: Crouzade 71372

text: Crocuta crocuta

text: Crocuta crocuta

text: Crouzade 71372


text: GSC

text: public

text: spotted hyena

text: Tournal 106

text: Crocuta crocuta

text: Crocuta crocuta

text: Tournal 106


text: Plasmodium vivax

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: malaria parasite P. vivax

text: Plasmodium vivax

text: Plasmodium vivax

characteristic: subject id


text: Escherichia coli

text: SC

text: public

text: Escherichia coli

text: Escherichia coli

characteristic: organism

text: Escherichia coli

characteristic: title


text: Staphylococcus aureus

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: Staphylococcus aureus

text: Staphylococcus aureus

text: Staphylococcus aureus


text: male

characteristic: ArrayExpress-SEX

text: Treponema pallidum subsp. pallidum

characteristic: ENA-LAST-UPDATE

text: SC

text: public

characteristic: SRA accession

text: syphilis treponeme

text: Male

characteristic: gender

text: Treponema pallidum subsp. pallidum

text: Treponema pallidum subsp. pallidum


characteristic: External Id

text: public

tag: Namespace:MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY

characteristic: Submitter Id

text: AJ Repak

characteristic: collected by

text: Germany

characteristic: geographic location (country and/or sea)

text: Federsee

characteristic: geographic location (region and locality)

text: Blepharisma stoltei

text: Blepharisma stoltei

characteristic: strain

text: Blepharisma stoltei strain ATCC30299


text: UNIVERSITY HOHENHEIM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:UNIVERSITY HOHENHEIM

characteristic: collection date

text: NAFLD

characteristic: description

text: gut

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: Austria

text: 48� 12' 36.1188'' N

characteristic: geographic location (latitude)

text: 16� 21' 48.4164'' E

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: feces metagenome

characteristic: project name

text: feces metagenome

text: 16S amplicon

characteristic: sequencing method

text: sample


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY HOHENHEIM

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Control

text: gut

text: feces

text: stool

text: Austria

characteristic: geographic location (country and/or sea)

text: 48� 12' 36.1188'' N

text: 16� 21' 48.4164'' E

text: human-gut

text: feces metagenome

characteristic: organism

text: feces metagenome

text: 16S amplicon

text: sample

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:VTT Technical Research Centre of Finland Ltd

text: baker's yeast

characteristic: common name

text: Saccharomyces cerevisiae

characteristic: host scientific name

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae whole genome sequencing short reads


text: VTT Technical Research Centre of Finland Ltd

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae wine strain whole genome short read sequencing


text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae whole genome short read sequencing


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89_3d_controlroot_P20medium_replicate1 technical replicate 1

characteristic: description

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Lbicolor_3d_Freelivingmycelium_P20medium_replicate1 technical replicate 2

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89_3d_controlroot_P20medium_replicate2 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89_3d_controlroot_P20medium_replicate3 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89_3d_controlroot_P20medium_replicate4 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89/Lbicolor_3d_Ectomycorrhiza_P20medium_replicate1 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89/Lbicolor_3d_Ectomycorrhiza_P20medium_replicate2 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89/Lbicolor_3d_Ectomycorrhiza_P20medium_replicate3 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89/Lbicolor_3d_Ectomycorrhiza_P20medium_replicate4 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Lbicolor_3d_Freelivingmycelium_P20medium_replicate1 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Lbicolor_3d_Freelivingmycelium_P20medium_replicate2 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Lbicolor_3d_Freelivingmycelium_P20medium_replicate3 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89_7d_controlroot_P20medium_replicate1 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89_7d_controlroot_P20medium_replicate2 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89_7d_controlroot_P20medium_replicate3 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89_7d_controlroot_P20medium_replicate4 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89/Lbicolor_7d_Ectomycorrhiza_P20medium_replicate1 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89/Lbicolor_7d_Ectomycorrhiza_P20medium_replicate2 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Lbicolor_3d_Freelivingmycelium_P20medium_replicate1 technical replicate 2

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89/Lbicolor_7d_Ectomycorrhiza_P20medium_replicate3 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89/Lbicolor_7d_Ectomycorrhiza_P20medium_replicate4 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Lbicolor_7d_Freelivingmycelium_P20medium_replicate1 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Lbicolor_7d_Freelivingmycelium_P20medium_replicate2 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Lbicolor_7d_Freelivingmycelium_P20medium_replicate3 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89_14d_controlroot_P20medium_replicate1 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89_14d_controlroot_P20medium_replicate2 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89_14d_controlroot_P20medium_replicate3 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89_14d_controlroot_P20medium_replicate4 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89/Lbicolor_14d_Ectomycorrhiza_P20medium_replicate1 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89/Lbicolor_14d_Ectomycorrhiza_P20medium_replicate2 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89/Lbicolor_14d_Ectomycorrhiza_P20medium_replicate3 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89/Lbicolor_14d_Ectomycorrhiza_P20medium_replicate4 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Lbicolor_14d_Freelivingmycelium_P20medium_replicate1 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Lbicolor_14d_Freelivingmycelium_P20medium_replicate2 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Lbicolor_14d_Freelivingmycelium_P20medium_replicate3 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Lbicolor_3d_Freelivingmycelium_P20medium_replicate1 technical replicate 2

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89_21d_controlroot_P20medium_replicate1 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89_21d_controlroot_P20medium_replicate2 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89_21d_controlroot_P20medium_replicate3 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89_21d_controlroot_P20medium_replicate4 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89/Lbicolor_21d_Ectomycorrhiza_P20medium_replicate1 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89/Lbicolor_21d_Ectomycorrhiza_P20medium_replicate2 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89/Lbicolor_21d_Ectomycorrhiza_P20medium_replicate3 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89/Lbicolor_21d_Ectomycorrhiza_P20medium_replicate4 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Lbicolor_21d_Freelivingmycelium_P20medium_replicate1 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Lbicolor_21d_Freelivingmycelium_P20medium_replicate2 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Lbicolor_21d_Freelivingmycelium_P20medium_replicate3 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89_28d_controlroot_P20medium_replicate1 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89_28d_controlroot_P20medium_replicate2 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89_28d_controlroot_P20medium_replicate3 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89_28d_controlroot_P20medium_replicate4 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89/Lbicolor_28d_Ectomycorrhiza_P20medium_replicate1 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Lbicolor_3d_Freelivingmycelium_P20medium_replicate1 technical replicate 2

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89/Lbicolor_28d_Ectomycorrhiza_P20medium_replicate2 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89/Lbicolor_28d_Ectomycorrhiza_P20medium_replicate3 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: T89/Lbicolor_28d_Ectomycorrhiza_P20medium_replicate4 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Lbicolor_28d_Freelivingmycelium_P20medium_replicate1 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Lbicolor_28d_Freelivingmycelium_P20medium_replicate2 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Lbicolor_28d_Freelivingmycelium_P20medium_replicate3 technical replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: not applicable

characteristic: ArrayExpress-Sex

text: unidentified

characteristic: ArrayExpress-Species

text: SC

text: public

text: unidentified

text: unidentified

text: Blood culture isolate

text: unidentified

characteristic: strain


text: Salmonella enterica

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: Salmonella enterica

text: Salmonella enterica

text: Salmonella enterica


characteristic: External Id

text: RUDER BOSCOVIC INSTITUTE

text: public

characteristic: SRA accession

tag: Namespace:RUDER BOSCOVIC INSTITUTE

characteristic: Submitter Id

characteristic: collection date

text: seawater

text: sea

characteristic: environment (biome)

text: coastal sea

characteristic: environment (feature)

text: seawater

characteristic: environment (material)

text: Croatia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: investigation type

text: miscellaneous natural or artificial environment

characteristic: miscellaneous environmental package

text: seawater metagenome

text: AQUAHEALTH

characteristic: project name

text: seawater metagenome

text: Illumina sequencing

characteristic: sequencing method


characteristic: ENA-CHECKLIST

text: RUDER BOSCOVIC INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: sediment

characteristic: description

text: marine sediment

text: coastal sea

text: marine sediment

text: Croatia

text: marine sediment metagenome

characteristic: organism

text: AQUAHEALTH

text: marine sediment metagenome

text: Illumina sequencing

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RUDER BOSCOVIC INSTITUTE

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: seawater

text: sea

characteristic: environment (biome)

text: coastal sea

characteristic: environment (feature)

text: seawater

text: Croatia

text: eukaryote

text: seawater metagenome

text: AQUAHEALTH

text: seawater metagenome

text: Illumina sequencing


text: RUDER BOSCOVIC INSTITUTE

text: public

text: sediment

text: marine sediment

text: coastal sea

text: marine sediment

characteristic: environment (material)

text: Croatia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

characteristic: miscellaneous environmental package

text: marine sediment metagenome

text: AQUAHEALTH

characteristic: project name

text: marine sediment metagenome

text: Illumina sequencing

characteristic: sequencing method


text: Klebsiella pneumoniae

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Klebsiella pneumoniae

characteristic: common name

text: Klebsiella pneumoniae

characteristic: organism

text: Klebsiella pneumoniae

characteristic: subject id

characteristic: title


text: Escherichia coli

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli


E-MTAB-9757:2-cell embryo r1

text: public

text: E-MTAB-9757:2-cell embryo r1

tag: Namespace:Institute of Clinical Sciences, Faculty of Medicine, Imperial College London and MRC London Institute of Medical Sciences

unit: hour

characteristic: age

text: ArrayExpress

characteristic: broker name

text: embryonic cell

text: house mouse

text: Protocols: Primordial and gonadal germ cells were isolated from embryos obtained from a 129Sv female and GOF18ΔPE-EGFP male cross. Genital ridges from 1-2 litters (7-8 embryos per litter) were dissected out and digested at 37°C for 3 min using TrypLE Express (Thermo Fisher Scientific). For E9.5 and E10.5 stages, posterior half of the embryo was dissected out and digested with trypsin solution (0.25% trypsin, 10% chick serum (both from Life Technologies), 1.27mM EDTA (Sigma)). Litters were pooled for stages up to and including E11.5 to obtain more material. Enzymatic digestion was neutralized with DMEM/F-12 (Gibco) supplemented with 15% fetal bovine serum (Gibco) after manual dissociation by gentle pipetting. The cells were spun down by centrifugation and resuspended in 0.1% BSA PBS. GFP-positive cells were isolated using an Aria Fusion (BD Bioscience) flow cytometer and sorted into ice-cold PBS. All preimplantation embryos were prepared by IVF. Collection of P6 and MII oocytes, and fertilized embryos was performed based on previous reports. Briefly, P6 oocytes were collected from C57BL/6J strain female mice at P6. The ovaries were dissected well with a microscissors before being incubated in 0.05% collagenase (gibco) dissolved in Dulbecco’s modified Eagle’s medium-F12 (DMEM/F12; Invitrogen) supplemented with 4 mg/ml bovine serum albumin (BSA; SIGMA), 80 µg/ml Kanamycin (SIGMA), with frequent pipetting. After 30 min, the oocytes were picked up using mouth pipette and transferred to PBS solution for washing. To select the oocytes at primordial follicle stage, the size of the oocytes was measured by an imaging software system (Octax EyeWare, Octax) and the 20-30 µm of oocytes were collected for further experiments. MII oocytes were collected from C57BL/6J female mice that were superovulated with serum gonadotropin (PMSG-Intervet; MSD) and human chorionic gonadotropin (hCG; CHORULON) at 46- to 52-h intervals. Spermatozoa were collected from the cauda epididymides of C57BL/6J male mice. The sperm suspension was preincubated in human tubal fluid (HTF) medium for 1.5 h at 37 °C under 5% CO2 in humidified air. The sperm suspension was added to the oocyte cultures, and morphologically normally fertilized oocytes were collected 2 h after insemination. Fertilized embryos were cultured in potassium simplex optimized medium (KSOM) at 37 °C under 5% CO2 in humidified air. Total RNA was isolated from the samples using the DNA/RNA Duet Kit miniprep kit (Zymo Research, USA). 5-20 ng of total RNA isolated from each sample was used for SLIC-CAGE TSS mapping. Briefly, 5 μg of the carrier RNA mix were added to each sample prior to reverse transcription, followed by the cap-trapping steps designed to isolate capped RNA polymerase II transcripts. The carrier was degraded from the final library prior to sequencing using homing endonucleases. The target library derived from the sample RNA polymerase II transcripts was PCR-amplified and purified using AMPure beads (Beckman Coulter) to remove short PCR artefacts (< 200bp, size selection using 0.8 x AMPure beads to sample ratio).

characteristic: description

text: embryo stage

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: 2-cell embryo

characteristic: organism part

text: Mus musculus

characteristic: sex

characteristic: strain

text: 2-cell embryo r1


E-MTAB-9757:2-cell embryo r2

characteristic: ENA-CHECKLIST

text: Institute of Clinical Sciences, Faculty of Medicine, Imperial College London and MRC London Institute of Medical Sciences

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-9757:2-cell embryo r2

text: ArrayExpress

text: embryonic cell

text: house mouse

characteristic: common name

text: embryo stage

text: wild type genotype

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: 2-cell embryo

text: Mus musculus

text: 2-cell embryo r2


E-MTAB-9757:4-cell embryo r1

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-9757:4-cell embryo r1

characteristic: Submitter Id

text: ArrayExpress

text: embryonic cell

text: house mouse

text: embryo stage

text: wild type genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: 4-cell embryo

text: Mus musculus

text: 4-cell embryo r1

characteristic: title


E-MTAB-9757:4-cell embryo r2

text: public

text: E-MTAB-9757:4-cell embryo r2

characteristic: age

text: ArrayExpress

characteristic: broker name

text: embryonic cell

text: house mouse

characteristic: description

text: embryo stage

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: 4-cell embryo

text: Mus musculus

text: 4-cell embryo r2


E-MTAB-9757:E10.5 r1

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-9757:E10.5 r1

text: embryonic day 10.5

unit: day

text: ArrayExpress

text: gonadal germ cell

text: house mouse

text: embryo stage

text: not applicable

text: Mus musculus

text: Mus musculus

text: gonad

characteristic: organism part

text: Mus musculus

characteristic: sex

characteristic: strain

text: E10.5 r1


E-MTAB-9757:E10.5 r2

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-9757:E10.5 r2

text: embryonic day 10.5

text: ArrayExpress

text: gonadal germ cell

text: house mouse

characteristic: common name

text: embryo stage

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: gonad

text: Mus musculus

text: E10.5 r2


E-MTAB-9757:E10.5 r3

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-9757:E10.5 r3

characteristic: Submitter Id

text: embryonic day 10.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: gonadal germ cell

text: house mouse

text: embryo stage

text: not applicable

text: Mus musculus

text: Mus musculus

text: gonad

text: Mus musculus

text: E10.5 r3

characteristic: title


E-MTAB-9757:E11.5 r1

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

text: E-MTAB-9757:E11.5 r1

text: embryonic day 11.5

text: ArrayExpress

text: gonadal germ cell

text: house mouse

characteristic: description

text: embryo stage

characteristic: developmental stage

characteristic: genotype

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: gonad

text: Mus musculus

text: E11.5 r1


E-MTAB-9757:E11.5 r2

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC first public

text: public

text: E-MTAB-9757:E11.5 r2

text: embryonic day 11.5

text: ArrayExpress

text: gonadal germ cell

text: house mouse

text: embryo stage

text: not applicable

text: Mus musculus

text: Mus musculus

text: gonad

characteristic: organism part

text: Mus musculus

characteristic: sex

characteristic: strain

text: E11.5 r2


E-MTAB-9757:E12.5F r1

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-9757:E12.5F r1

text: embryonic day 12.5

text: ArrayExpress

text: gonadal germ cell

text: house mouse

characteristic: common name

text: embryo stage

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: gonad

text: Mus musculus

text: female

text: E12.5F r1


E-MTAB-9757:E12.5F r2

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

text: E-MTAB-9757:E12.5F r2

characteristic: Submitter Id

text: embryonic day 12.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: gonadal germ cell

text: house mouse

text: embryo stage

text: not applicable

text: Mus musculus

text: Mus musculus

text: gonad

text: Mus musculus

text: female

text: E12.5F r2

characteristic: title


E-MTAB-9757:E12.5M r1

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-9757:E12.5M r1

text: embryonic day 12.5

text: ArrayExpress

text: gonadal germ cell

text: house mouse

characteristic: description

text: embryo stage

characteristic: developmental stage

characteristic: genotype

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: gonad

text: Mus musculus

text: male

text: E12.5M r1


E-MTAB-9757:E12.5M r2

characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-9757:E12.5M r2

text: embryonic day 12.5

text: ArrayExpress

text: gonadal germ cell

text: house mouse

text: embryo stage

text: not applicable

text: Mus musculus

text: Mus musculus

text: gonad

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: E12.5M r2


E-MTAB-9757:E13.5F r1

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-9757:E13.5F r1

text: embryonic day 13.5

text: ArrayExpress

text: gonadal germ cell

text: house mouse

characteristic: common name

text: embryo stage

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: gonad

text: Mus musculus

text: female

text: E13.5F r1


E-MTAB-9757:E13.5F r2

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-9757:E13.5F r2

characteristic: Submitter Id

text: embryonic day 13.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: gonadal germ cell

text: house mouse

text: embryo stage

text: not applicable

text: Mus musculus

text: Mus musculus

text: gonad

text: Mus musculus

text: female

text: E13.5F r2

characteristic: title


E-MTAB-9757:E13.5M r1

characteristic: External Id

characteristic: INSDC first public

text: public

text: E-MTAB-9757:E13.5M r1

text: embryonic day 13.5

text: ArrayExpress

text: gonadal germ cell

text: house mouse

characteristic: description

text: embryo stage

characteristic: developmental stage

characteristic: genotype

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: gonad

text: Mus musculus

text: male

text: E13.5M r1


E-MTAB-9757:E13.5M r2

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: E-MTAB-9757:E13.5M r2

text: embryonic day 13.5

text: ArrayExpress

text: gonadal germ cell

text: house mouse

text: embryo stage

text: not applicable

text: Mus musculus

text: Mus musculus

text: gonad

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: E13.5M r2


E-MTAB-9757:E14.5F r1

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-9757:E14.5F r1

text: embryonic day 14.5

text: ArrayExpress

text: gonadal germ cell

text: house mouse

characteristic: common name

text: embryo stage

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: gonad

text: Mus musculus

text: female

text: E14.5F r1


E-MTAB-9757:E14.5F r2

characteristic: External Id

characteristic: INSDC first public

text: public

text: E-MTAB-9757:E14.5F r2

characteristic: Submitter Id

text: embryonic day 14.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: gonadal germ cell

text: house mouse

text: embryo stage

text: not applicable

text: Mus musculus

text: Mus musculus

text: gonad

text: Mus musculus

text: female

text: E14.5F r2

characteristic: title


E-MTAB-9757:E14.5M r1

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

text: E-MTAB-9757:E14.5M r1

text: embryonic day 14.5

text: ArrayExpress

text: gonadal germ cell

text: house mouse

characteristic: description

text: embryo stage

characteristic: developmental stage

characteristic: genotype

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: gonad

text: Mus musculus

text: male

text: E14.5M r1


E-MTAB-9757:E14.5M r2

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

text: E-MTAB-9757:E14.5M r2

text: embryonic day 14.5

text: ArrayExpress

text: gonadal germ cell

text: house mouse

text: embryo stage

text: not applicable

text: Mus musculus

text: Mus musculus

text: gonad

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: E14.5M r2


E-MTAB-9757:E16.5F r1

characteristic: External Id

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-9757:E16.5F r1

text: embryonic day 16.5

text: ArrayExpress

text: gonadal germ cell

text: house mouse

characteristic: common name

text: embryo stage

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: gonad

text: Mus musculus

text: female

text: E16.5F r1


E-MTAB-9757:E16.5F r2

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

text: E-MTAB-9757:E16.5F r2

characteristic: Submitter Id

text: embryonic day 16.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: gonadal germ cell

text: house mouse

text: embryo stage

text: not applicable

text: Mus musculus

text: Mus musculus

text: gonad

text: Mus musculus

text: female

text: E16.5F r2

characteristic: title


E-MTAB-9757:E16.5M r1

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-9757:E16.5M r1

text: embryonic day 16.5

text: ArrayExpress

text: gonadal germ cell

text: house mouse

characteristic: description

text: embryo stage

characteristic: developmental stage

characteristic: genotype

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: gonad

text: Mus musculus

text: male

text: E16.5M r1


E-MTAB-9757:E16.5M r2

characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-9757:E16.5M r2

text: embryonic day 16.5

text: ArrayExpress

text: gonadal germ cell

text: house mouse

text: embryo stage

text: not applicable

text: Mus musculus

text: Mus musculus

text: gonad

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: E16.5M r2


E-MTAB-9757:E9.5 r1

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-9757:E9.5 r1

text: embryonic day 9.5

text: ArrayExpress

text: migratory primordial germ cell

text: house mouse

characteristic: common name

text: embryo stage

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: gonad

text: Mus musculus

text: E9.5 r1


E-MTAB-9757:E9.5 r2

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-9757:E9.5 r2

characteristic: Submitter Id

text: embryonic day 9.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: migratory primordial germ cell

text: house mouse

text: embryo stage

text: not applicable

text: Mus musculus

text: Mus musculus

text: gonad

text: Mus musculus

text: E9.5 r2

characteristic: title


E-MTAB-9757:MII oocyte r1

characteristic: External Id

characteristic: INSDC first public

text: public

text: E-MTAB-9757:MII oocyte r1

text: 6 to 8

unit: week

text: ArrayExpress

text: oocyte

text: house mouse

characteristic: description

text: juvenile stage

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: oocyte

text: Mus musculus

text: female

text: MII oocyte r1


E-MTAB-9757:MII oocyte r2

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: E-MTAB-9757:MII oocyte r2

text: 6 to 8

text: ArrayExpress

text: oocyte

text: house mouse

text: juvenile stage

text: wild type genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: oocyte

characteristic: organism part

text: Mus musculus

text: female

characteristic: sex

characteristic: strain

text: MII oocyte r2


E-MTAB-9757:MII oocyte r3

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-9757:MII oocyte r3

text: 6 to 8

text: ArrayExpress

text: oocyte

text: house mouse

characteristic: common name

text: juvenile stage

text: wild type genotype

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: oocyte

text: Mus musculus

text: female

text: MII oocyte r3


E-MTAB-9757:P6 oocyte r1

characteristic: External Id

characteristic: INSDC first public

text: public

text: E-MTAB-9757:P6 oocyte r1

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: oocyte

text: house mouse

text: infant

text: wild type genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: oocyte

text: Mus musculus

text: female

text: P6 oocyte r1

characteristic: title


E-MTAB-9757:P6 oocyte r2

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

text: E-MTAB-9757:P6 oocyte r2

text: ArrayExpress

text: oocyte

text: house mouse

characteristic: description

text: infant

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: oocyte

text: Mus musculus

text: female

text: P6 oocyte r2


E-MTAB-9766:Sample 1

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

text: E-MTAB-9766:Sample 1

tag: Namespace:Advanced Centre for Treatment Research and Education in Cancer

unit: year

text: ArrayExpress

text: human

text: Protocols: 17 paired and 1 orphan tumor were collected from ACTREC-TMC. DNA was extracted from tumor tissue and the matched normal tissue or blood using DNeasy tissue extraction kit (Qiagen) and QIAamp DNA blood mini kit (Qiagen) following manufacturer’s instruction. Genomic DNA was sheared using covaris to generate 150-500 bp fragment size. The fragment ends were repaired followed by adenylation at 3’end and sample was purified using AMPure XP beads. The fragments were ligated to adaptor and amplified by PCR. The generated library is then hybridized with SureselectTarget Enrichment system kit and hybrids are separated using streptavidin coated magnetic beads. Then the sample was PCR amplified using indexing primers and purified. The prepared libraries were loaded on Illumina flowcell to generate clusters

text: adult

text: cervical cancer

characteristic: disease

text: germline genotype

characteristic: individual

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

characteristic: organism part

text: normal tissue adjacent to neoplasm

characteristic: sampling site

text: Homo sapiens

text: female

characteristic: sex

text: Sample 1


E-MTAB-9766:Sample 2

characteristic: External Id

text: Advanced Centre for Treatment Research and Education in Cancer

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-9766:Sample 2

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: human

characteristic: common name

text: adult

text: cervical cancer

text: somatic genotype

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: uterine cervix

text: neoplasm

text: Homo sapiens

text: female

text: Sample 2


E-MTAB-9766:Sample 3

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

text: E-MTAB-9766:Sample 3

text: ArrayExpress

characteristic: broker name

text: human

characteristic: description

text: adult

characteristic: developmental stage

text: cervical cancer

text: germline genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: normal tissue adjacent to neoplasm

text: Homo sapiens

text: female

text: Sample 3

characteristic: title


E-MTAB-9766:Sample 4

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

text: E-MTAB-9766:Sample 4

text: ArrayExpress

text: human

text: adult

text: cervical cancer

characteristic: disease

text: germline genotype

characteristic: individual

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

characteristic: organism part

text: normal tissue adjacent to neoplasm

characteristic: sampling site

text: Homo sapiens

text: female

characteristic: sex

text: Sample 4


E-MTAB-9766:Sample 5

characteristic: External Id

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-9766:Sample 5

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: human

characteristic: common name

text: adult

text: cervical cancer

text: somatic genotype

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: uterine cervix

text: neoplasm

text: Homo sapiens

text: female

text: Sample 5


E-MTAB-9766:Sample 6

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

text: E-MTAB-9766:Sample 6

text: ArrayExpress

characteristic: broker name

text: human

characteristic: description

text: adult

characteristic: developmental stage

text: cervical cancer

text: germline genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: normal tissue adjacent to neoplasm

text: Homo sapiens

text: female

text: Sample 6

characteristic: title


E-MTAB-9766:Sample 7

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

text: E-MTAB-9766:Sample 7

text: ArrayExpress

text: human

text: adult

text: cervical cancer

characteristic: disease

text: germline genotype

characteristic: individual

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

characteristic: organism part

text: normal tissue adjacent to neoplasm

characteristic: sampling site

text: Homo sapiens

text: female

characteristic: sex

text: Sample 7


E-MTAB-9766:Sample 8

characteristic: External Id

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-9766:Sample 8

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: human

characteristic: common name

text: adult

text: cervical cancer

text: germline genotype

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: uterine cervix

text: normal tissue adjacent to neoplasm

text: Homo sapiens

text: female

text: Sample 8


E-MTAB-9766:Sample 9

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

text: E-MTAB-9766:Sample 9

text: ArrayExpress

characteristic: broker name

text: human

characteristic: description

text: adult

characteristic: developmental stage

text: cervical cancer

text: germline genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: normal tissue adjacent to neoplasm

text: Homo sapiens

text: female

text: Sample 9

characteristic: title


E-MTAB-9766:Sample 10

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

text: E-MTAB-9766:Sample 10

text: ArrayExpress

text: human

text: adult

text: cervical cancer

characteristic: disease

text: somatic genotype

characteristic: individual

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

characteristic: organism part

text: neoplasm

characteristic: sampling site

text: Homo sapiens

text: female

characteristic: sex

text: Sample 10


E-MTAB-9766:Sample 11

characteristic: External Id

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-9766:Sample 11

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: human

characteristic: common name

text: adult

text: cervical cancer

text: germline genotype

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: uterine cervix

text: normal tissue adjacent to neoplasm

text: Homo sapiens

text: female

text: Sample 11


E-MTAB-9766:Sample 12

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

text: E-MTAB-9766:Sample 12

text: ArrayExpress

characteristic: broker name

text: human

characteristic: description

text: adult

characteristic: developmental stage

text: cervical cancer

text: germline genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: normal tissue adjacent to neoplasm

text: Homo sapiens

text: female

text: Sample 12

characteristic: title


E-MTAB-9766:Sample 13

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

text: E-MTAB-9766:Sample 13

text: ArrayExpress

text: human

text: adult

text: cervical cancer

characteristic: disease

text: somatic genotype

characteristic: individual

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

characteristic: organism part

text: neoplasm

characteristic: sampling site

text: Homo sapiens

text: female

characteristic: sex

text: Sample 13


E-MTAB-9766:Sample 14

characteristic: External Id

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-9766:Sample 14

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: human

characteristic: common name

text: adult

text: cervical cancer

text: somatic genotype

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: uterine cervix

text: neoplasm

text: Homo sapiens

text: female

text: Sample 14


E-MTAB-9766:Sample 15

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

text: E-MTAB-9766:Sample 15

text: ArrayExpress

characteristic: broker name

text: human

characteristic: description

text: adult

characteristic: developmental stage

text: cervical cancer

text: germline genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: normal tissue adjacent to neoplasm

text: Homo sapiens

text: female

text: Sample 15

characteristic: title


E-MTAB-9766:Sample 16

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

text: E-MTAB-9766:Sample 16

text: ArrayExpress

text: human

text: adult

text: cervical cancer

characteristic: disease

text: somatic genotype

characteristic: individual

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

characteristic: organism part

text: neoplasm

characteristic: sampling site

text: Homo sapiens

text: female

characteristic: sex

text: Sample 16


E-MTAB-9766:Sample 17

characteristic: External Id

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-9766:Sample 17

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: human

characteristic: common name

text: adult

text: cervical cancer

text: germline genotype

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: uterine cervix

text: normal tissue adjacent to neoplasm

text: Homo sapiens

text: female

text: Sample 17


E-MTAB-9766:Sample 18

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

text: E-MTAB-9766:Sample 18

text: ArrayExpress

characteristic: broker name

text: human

characteristic: description

text: adult

characteristic: developmental stage

text: cervical cancer

text: somatic genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: neoplasm

text: Homo sapiens

text: female

text: Sample 18

characteristic: title


E-MTAB-9766:Sample 19

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

text: E-MTAB-9766:Sample 19

text: ArrayExpress

text: human

text: adult

text: cervical cancer

characteristic: disease

text: germline genotype

characteristic: individual

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

characteristic: organism part

text: normal tissue adjacent to neoplasm

characteristic: sampling site

text: Homo sapiens

text: female

characteristic: sex

text: Sample 19


E-MTAB-9766:Sample 20

characteristic: External Id

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-9766:Sample 20

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: human

characteristic: common name

text: adult

text: cervical cancer

text: somatic genotype

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: uterine cervix

text: neoplasm

text: Homo sapiens

text: female

text: Sample 20


E-MTAB-9766:Sample 21

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

text: E-MTAB-9766:Sample 21

text: ArrayExpress

characteristic: broker name

text: human

characteristic: description

text: adult

characteristic: developmental stage

text: cervical cancer

text: germline genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: normal tissue adjacent to neoplasm

text: Homo sapiens

text: female

text: Sample 21

characteristic: title


E-MTAB-9766:Sample 22

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

text: E-MTAB-9766:Sample 22

text: ArrayExpress

text: human

text: adult

text: cervical cancer

characteristic: disease

text: somatic genotype

characteristic: individual

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

characteristic: organism part

text: neoplasm

characteristic: sampling site

text: Homo sapiens

text: female

characteristic: sex

text: Sample 22


E-MTAB-9766:Sample 23

characteristic: External Id

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-9766:Sample 23

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: human

characteristic: common name

text: adult

text: cervical cancer

text: germline genotype

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: uterine cervix

text: normal tissue adjacent to neoplasm

text: Homo sapiens

text: female

text: Sample 23


E-MTAB-9766:Sample 24

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

text: E-MTAB-9766:Sample 24

text: ArrayExpress

characteristic: broker name

text: human

characteristic: description

text: adult

characteristic: developmental stage

text: cervical cancer

text: germline genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: normal tissue adjacent to neoplasm

text: Homo sapiens

text: female

text: Sample 24

characteristic: title


E-MTAB-9766:Sample 25

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

text: E-MTAB-9766:Sample 25

text: ArrayExpress

text: human

text: adult

text: cervical cancer

characteristic: disease

text: somatic genotype

characteristic: individual

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

characteristic: organism part

text: neoplasm

characteristic: sampling site

text: Homo sapiens

text: female

characteristic: sex

text: Sample 25


E-MTAB-9766:Sample 26

characteristic: External Id

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-9766:Sample 26

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: human

characteristic: common name

text: adult

text: cervical cancer

text: germline genotype

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: uterine cervix

text: normal tissue adjacent to neoplasm

text: Homo sapiens

text: female

text: Sample 26


E-MTAB-9766:Sample 27

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

text: E-MTAB-9766:Sample 27

text: ArrayExpress

characteristic: broker name

text: human

characteristic: description

text: adult

characteristic: developmental stage

text: cervical cancer

text: germline genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: normal tissue adjacent to neoplasm

text: Homo sapiens

text: female

text: Sample 27

characteristic: title


E-MTAB-9766:Sample 28

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

text: E-MTAB-9766:Sample 28

text: ArrayExpress

text: human

text: adult

text: cervical cancer

characteristic: disease

text: somatic genotype

characteristic: individual

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

characteristic: organism part

text: neoplasm

characteristic: sampling site

text: Homo sapiens

text: female

characteristic: sex

text: Sample 28


E-MTAB-9766:Sample 29

characteristic: External Id

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-9766:Sample 29

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: human

characteristic: common name

text: adult

text: cervical cancer

text: somatic genotype

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: uterine cervix

text: neoplasm

text: Homo sapiens

text: female

text: Sample 29


E-MTAB-9766:Sample 30

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

text: E-MTAB-9766:Sample 30

text: ArrayExpress

characteristic: broker name

text: human

characteristic: description

text: adult

characteristic: developmental stage

text: cervical cancer

text: somatic genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: neoplasm

text: Homo sapiens

text: female

text: Sample 30

characteristic: title


E-MTAB-9766:Sample 31

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

text: E-MTAB-9766:Sample 31

text: ArrayExpress

text: human

text: adult

text: cervical cancer

characteristic: disease

text: somatic genotype

characteristic: individual

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

characteristic: organism part

text: neoplasm

characteristic: sampling site

text: Homo sapiens

text: female

characteristic: sex

text: Sample 31


E-MTAB-9766:Sample 32

characteristic: External Id

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-9766:Sample 32

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: human

characteristic: common name

text: adult

text: cervical cancer

text: somatic genotype

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: uterine cervix

text: neoplasm

text: Homo sapiens

text: female

text: Sample 32


E-MTAB-9766:Sample 33

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

text: E-MTAB-9766:Sample 33

text: ArrayExpress

characteristic: broker name

text: human

characteristic: description

text: adult

characteristic: developmental stage

text: cervical cancer

text: somatic genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

text: neoplasm

text: Homo sapiens

text: female

text: Sample 33

characteristic: title


E-MTAB-9766:Sample 34

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

text: E-MTAB-9766:Sample 34

text: ArrayExpress

text: human

text: adult

text: cervical cancer

characteristic: disease

text: somatic genotype

characteristic: individual

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: uterine cervix

characteristic: organism part

text: neoplasm

characteristic: sampling site

text: Homo sapiens

text: female

characteristic: sex

text: Sample 34


E-MTAB-9766:Sample 35

characteristic: External Id

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-9766:Sample 35

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: human

characteristic: common name

text: adult

text: cervical cancer

text: somatic genotype

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: uterine cervix

text: neoplasm

text: Homo sapiens

text: female

text: Sample 35


characteristic: ENA-CHECKLIST

text: BUGS

characteristic: INSDC center name

text: public

text: vaginal metagenome

text: vaginal metagenome

text: Vaginal swab from POPI study

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

tag: Namespace:Key Laboratory of Environmental and Applied Microbiology, CAS

characteristic: collection date

text: skin

characteristic: environment (biome)

text: skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: mimarks-survey

characteristic: investigation type

text: gut metagenome

characteristic: project name

text: gut metagenome

text: MiSeq

characteristic: sequencing method

text: skin


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Key Laboratory of Environmental and Applied Microbiology, CAS

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: skin

text: skin

text: skin

text: China

text: host-associated

text: mimarks-survey

text: gut metagenome

characteristic: organism

text: gut metagenome

text: MiSeq

text: skin


text: Salmonella enterica

characteristic: ArrayExpress-SPECIES

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: Salmonella enterica

characteristic: common name

text: Salmonella enterica

text: Salmonella enterica

characteristic: title


text: Escherichia coli

text: SC

text: public

text: Escherichia coli

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