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characteristic: geographic location (country and/or sea)

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text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/TA-NVRL-S22IRL00020108/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/TA-NVRL-S21IRL00605330/2021


characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: active surveillance in response to outbreak

text: hCoV-19/Ireland/TA-NVRL-S21IRL00606188/2021

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/TA-NVRL-S21IRL00605135/2021


characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/TA-NVRL-S21IRL00606187/2021

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/TA-NVRL-S21IRL00605763/2021


characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/TA-NVRL-S21IRL00605359/2021

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/TA-NVRL-S21IRL00605797/2021


characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/TA-NVRL-M21IRL00784580/2021

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/TA-NVRL-S21IRL00605336/2021


characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/TA-NVRL-S21IRL00605777/2021

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/TA-NVRL-S21IRL00605803/2021


characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/TA-NVRL-S21IRL00605351/2021

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/TA-NVRL-S21IRL00605341/2021


characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/TA-NVRL-S21IRL00605779/2021

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/TA-NVRL-S21IRL00605340/2021


characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: active surveillance in response to outbreak

text: hCoV-19/Ireland/TA-NVRL-S21IRL00605352/2021

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/TA-NVRL-M21IRL01037540/2021


characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/TA-NVRL-M21IRL01037504/2021

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Waterford

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/WD-NVRL-S21IRL00604765/2021


characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Westmeath

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/WH-NVRL-M21IRL01028618/2021

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Westmeath

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/WH-NVRL-M21IRL01028617/2021


characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Westmeath

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/WH-NVRL-M21IRL01030597/2021

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Westmeath

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/WH-NVRL-M21IRL01028611/2021


characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Westmeath

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/WH-NVRL-M21IRL00935799/2021

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Westmeath

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/WH-NVRL-M21IRL00898676/2021


characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Westmeath

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/WH-NVRL-M21IRL00860976/2021

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Westmeath

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/WH-NVRL-M21IRL00917424/2021


characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Wexford

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: hCoV-19/Ireland/WX-NVRL-M21IRL00763234/2021

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INRA-META

text: public

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: metaFlye 2.9-b1768

characteristic: assembly software

text: MetaBAT defaults, SemiBin defaults with human_gut built-in model, metaWRAP bin_refinement module

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin v0.5.0, metaWRAP v1.3

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic run ERR8157883

text: human-associated habitat

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: human gut

characteristic: isolation source

text: human gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: organism

text: MGP PacBio

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: PacBio Sequel II

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: min17_bin01


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: metaFlye 2.9-b1768

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

text: checkm v1.1.3

characteristic: description

text: human-associated habitat

text: human-associated habitat

text: feces

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

text: metagenome-assembled genome

text: human gut

text: human gut metagenome

text: Paraprevotella clara

text: MGP PacBio

text: Paraprevotella clara

text: PacBio Sequel II

text: multi-marker approach

text: Metagenome-assembled genome: min17_bin02

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INRA-META

text: public

text: metaFlye 2.9-b1768

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: human-associated habitat

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: human gut

characteristic: isolation source

text: human gut metagenome

characteristic: metagenomic source

text: uncultured Alistipes sp.

characteristic: organism

text: MGP PacBio

characteristic: project name

characteristic: sample derived from

text: uncultured Alistipes sp.

text: PacBio Sequel II

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: min17_bin03


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaFlye 2.9-b1768

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

text: checkm v1.1.3

characteristic: description

text: human-associated habitat

text: human-associated habitat

text: feces

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

text: metagenome-assembled genome

text: human gut

text: human gut metagenome

text: uncultured Lachnospira sp.

text: MGP PacBio

text: uncultured Lachnospira sp.

text: PacBio Sequel II

text: multi-marker approach

text: Metagenome-assembled genome: min17_bin04

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INRA-META

text: public

text: metaFlye 2.9-b1768

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: human-associated habitat

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: human gut

characteristic: isolation source

text: human gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: organism

text: MGP PacBio

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: PacBio Sequel II

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: min17_bin05


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaFlye 2.9-b1768

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

text: checkm v1.1.3

characteristic: description

text: human-associated habitat

text: human-associated habitat

text: feces

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

text: metagenome-assembled genome

text: human gut

text: human gut metagenome

text: uncultured Lachnospira sp.

text: MGP PacBio

text: uncultured Lachnospira sp.

text: PacBio Sequel II

text: multi-marker approach

text: Metagenome-assembled genome: min17_bin06

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INRA-META

text: public

text: metaFlye 2.9-b1768

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: human-associated habitat

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: human gut

characteristic: isolation source

text: human gut metagenome

characteristic: metagenomic source

text: Bacteroides stercoris

characteristic: organism

text: MGP PacBio

characteristic: project name

characteristic: sample derived from

text: Bacteroides stercoris

text: PacBio Sequel II

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: min17_bin07


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaFlye 2.9-b1768

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

text: checkm v1.1.3

characteristic: description

text: human-associated habitat

text: human-associated habitat

text: feces

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

text: metagenome-assembled genome

text: human gut

text: human gut metagenome

text: uncultured Lachnospiraceae bacterium

text: MGP PacBio

text: uncultured Lachnospiraceae bacterium

text: PacBio Sequel II

text: multi-marker approach

text: Metagenome-assembled genome: min17_bin08

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INRA-META

text: public

text: metaFlye 2.9-b1768

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: human-associated habitat

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: human gut

characteristic: isolation source

text: human gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: organism

text: MGP PacBio

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: PacBio Sequel II

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: min17_bin09


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaFlye 2.9-b1768

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

text: checkm v1.1.3

characteristic: description

text: human-associated habitat

text: human-associated habitat

text: feces

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

text: metagenome-assembled genome

text: human gut

text: human gut metagenome

text: Oscillospiraceae bacterium

text: MGP PacBio

text: Oscillospiraceae bacterium

text: PacBio Sequel II

text: multi-marker approach

text: Metagenome-assembled genome: min17_bin10

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INRA-META

text: public

text: metaFlye 2.9-b1768

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: human-associated habitat

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: human gut

characteristic: isolation source

text: human gut metagenome

characteristic: metagenomic source

text: uncultured Tenericutes bacterium

characteristic: organism

text: MGP PacBio

characteristic: project name

characteristic: sample derived from

text: uncultured Tenericutes bacterium

text: PacBio Sequel II

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: min17_bin11


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaFlye 2.9-b1768

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

text: checkm v1.1.3

characteristic: description

text: human-associated habitat

text: human-associated habitat

text: feces

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

text: metagenome-assembled genome

text: human gut

text: human gut metagenome

text: Oscillospiraceae bacterium

text: MGP PacBio

text: Oscillospiraceae bacterium

text: PacBio Sequel II

text: multi-marker approach

text: Metagenome-assembled genome: min17_bin12

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INRA-META

text: public

text: metaFlye 2.9-b1768

text: MetaBAT defaults, SemiBin defaults with human_gut built-in model, metaWRAP bin_refinement module

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: human-associated habitat

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: human gut

characteristic: isolation source

text: human gut metagenome

characteristic: metagenomic source

text: Bacteroides nordii

characteristic: organism

text: MGP PacBio

characteristic: project name

characteristic: sample derived from

text: Bacteroides nordii

text: PacBio Sequel II

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: min17_bin13


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaFlye 2.9-b1768

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin v0.5.0, metaWRAP v1.3

characteristic: binning software

characteristic: collection date

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic run ERR8157883

characteristic: description

text: human-associated habitat

text: human-associated habitat

text: feces

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

text: metagenome-assembled genome

text: human gut

text: human gut metagenome

text: uncultured Tenericutes bacterium

text: MGP PacBio

text: uncultured Tenericutes bacterium

text: PacBio Sequel II

text: multi-marker approach

text: Metagenome-assembled genome: min17_bin14

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INRA-META

text: public

text: metaFlye 2.9-b1768

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: human-associated habitat

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: human gut

characteristic: isolation source

text: human gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: MGP PacBio

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: PacBio Sequel II

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: min17_bin15


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaFlye 2.9-b1768

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

text: checkm v1.1.3

characteristic: description

text: human-associated habitat

text: human-associated habitat

text: feces

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

text: metagenome-assembled genome

text: human gut

text: human gut metagenome

text: uncultured Lachnospira sp.

text: MGP PacBio

text: uncultured Lachnospira sp.

text: PacBio Sequel II

text: multi-marker approach

text: Metagenome-assembled genome: min17_bin16

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INRA-META

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: metaFlye 2.9-b1768

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: human-associated habitat

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: human gut

characteristic: isolation source

text: human gut metagenome

characteristic: metagenomic source

text: Butyricimonas faecalis

characteristic: organism

text: MGP PacBio

characteristic: project name

characteristic: sample derived from

text: Butyricimonas faecalis

text: PacBio Sequel II

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: min17_bin17


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: metaFlye 2.9-b1768

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

text: checkm v1.1.3

characteristic: description

text: human-associated habitat

text: human-associated habitat

text: feces

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

text: metagenome-assembled genome

text: human gut

text: human gut metagenome

text: uncultured Clostridia bacterium

text: MGP PacBio

text: uncultured Clostridia bacterium

text: PacBio Sequel II

text: multi-marker approach

text: Metagenome-assembled genome: min17_bin18

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INRA-META

text: public

text: metaFlye 2.9-b1768

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: human-associated habitat

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: human gut

characteristic: isolation source

text: human gut metagenome

characteristic: metagenomic source

text: Odoribacter splanchnicus

characteristic: organism

text: MGP PacBio

characteristic: project name

characteristic: sample derived from

text: Odoribacter splanchnicus

text: PacBio Sequel II

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: min17_bin19


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaFlye 2.9-b1768

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

text: checkm v1.1.3

characteristic: description

text: human-associated habitat

text: human-associated habitat

text: feces

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

text: metagenome-assembled genome

text: human gut

text: human gut metagenome

text: uncultured Ruminococcus sp.

text: MGP PacBio

text: uncultured Ruminococcus sp.

text: PacBio Sequel II

text: multi-marker approach

text: Metagenome-assembled genome: min17_bin20

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INRA-META

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaFlye 2.9-b1768

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: human-associated habitat

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: human gut

characteristic: isolation source

text: human gut metagenome

characteristic: metagenomic source

text: uncultured Oscillospiraceae bacterium

characteristic: organism

text: MGP PacBio

characteristic: project name

characteristic: sample derived from

text: uncultured Oscillospiraceae bacterium

text: PacBio Sequel II

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: min17_bin21


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaFlye 2.9-b1768

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

text: checkm v1.1.3

characteristic: description

text: human-associated habitat

text: human-associated habitat

text: feces

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

text: metagenome-assembled genome

text: human gut

text: human gut metagenome

text: Parabacteroides distasonis

text: MGP PacBio

text: Parabacteroides distasonis

text: PacBio Sequel II

text: multi-marker approach

text: Metagenome-assembled genome: min17_bin22

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INRA-META

text: public

text: metaFlye 2.9-b1768

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: human-associated habitat

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: human gut

characteristic: isolation source

text: human gut metagenome

characteristic: metagenomic source

text: uncultured Coriobacteriales bacterium

characteristic: organism

text: MGP PacBio

characteristic: project name

characteristic: sample derived from

text: uncultured Coriobacteriales bacterium

text: PacBio Sequel II

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: min17_bin23


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaFlye 2.9-b1768

characteristic: assembly software

text: MetaBAT defaults, SemiBin defaults with human_gut built-in model, metaWRAP bin_refinement module

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

text: checkm v1.1.3

characteristic: description

text: human-associated habitat

text: human-associated habitat

text: feces

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

text: metagenome-assembled genome

text: human gut

text: human gut metagenome

text: uncultured Lachnospira sp.

text: MGP PacBio

text: uncultured Lachnospira sp.

text: PacBio Sequel II

text: multi-marker approach

text: Metagenome-assembled genome: min17_bin24

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INRA-META

text: public

text: metaFlye 2.9-b1768

text: MetaBAT v2.12.1, SemiBin v0.5.0, metaWRAP v1.3

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: human-associated habitat

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: human gut

characteristic: isolation source

text: human gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: MGP PacBio

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: PacBio Sequel II

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: min17_bin25


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaFlye 2.9-b1768

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic run ERR8157883

characteristic: description

text: human-associated habitat

text: human-associated habitat

text: feces

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

text: metagenome-assembled genome

text: human gut

text: human gut metagenome

text: uncultured Clostridia bacterium

text: MGP PacBio

text: uncultured Clostridia bacterium

text: PacBio Sequel II

text: multi-marker approach

text: Metagenome-assembled genome: min17_bin26

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INRA-META

text: public

text: metaFlye 2.9-b1768

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: human-associated habitat

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: human gut

characteristic: isolation source

text: human gut metagenome

characteristic: metagenomic source

text: uncultured Oscillospiraceae bacterium

characteristic: organism

text: MGP PacBio

characteristic: project name

characteristic: sample derived from

text: uncultured Oscillospiraceae bacterium

text: PacBio Sequel II

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: min17_bin27


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: metaFlye 2.9-b1768

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

text: checkm v1.1.3

characteristic: description

text: human-associated habitat

text: human-associated habitat

text: feces

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

text: metagenome-assembled genome

text: human gut

text: human gut metagenome

text: Faecalibacillus intestinalis

text: MGP PacBio

text: Faecalibacillus intestinalis

text: PacBio Sequel II

text: multi-marker approach

text: Metagenome-assembled genome: min17_bin28

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INRA-META

text: public

text: metaFlye 2.9-b1768

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: human-associated habitat

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: human gut

characteristic: isolation source

text: human gut metagenome

characteristic: metagenomic source

text: Faecalibacterium prausnitzii

characteristic: organism

text: MGP PacBio

characteristic: project name

characteristic: sample derived from

text: Faecalibacterium prausnitzii

text: PacBio Sequel II

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: min17_bin29


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaFlye 2.9-b1768

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

text: checkm v1.1.3

characteristic: description

text: human-associated habitat

text: human-associated habitat

text: feces

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

text: metagenome-assembled genome

text: human gut

text: human gut metagenome

text: Barnesiella intestinihominis

text: MGP PacBio

text: Barnesiella intestinihominis

text: PacBio Sequel II

text: multi-marker approach

text: Metagenome-assembled genome: min17_bin30

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INRA-META

text: public

text: metaFlye 2.9-b1768

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: human-associated habitat

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: human gut

characteristic: isolation source

text: human gut metagenome

characteristic: metagenomic source

text: uncultured Alphaproteobacteria bacterium

characteristic: organism

text: MGP PacBio

characteristic: project name

characteristic: sample derived from

text: PacBio Sequel II

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: min17_bin31


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: metaFlye 2.9-b1768

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

text: checkm v1.1.3

characteristic: description

text: human-associated habitat

text: human-associated habitat

text: feces

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

text: metagenome-assembled genome

text: human gut

text: human gut metagenome

text: uncultured Tenericutes bacterium

text: MGP PacBio

text: uncultured Tenericutes bacterium

text: PacBio Sequel II

text: multi-marker approach

text: Metagenome-assembled genome: min17_bin32

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INRA-META

text: public

text: metaFlye 2.9-b1768

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: human-associated habitat

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: human gut

characteristic: isolation source

text: human gut metagenome

characteristic: metagenomic source

text: uncultured Oscillospiraceae bacterium

characteristic: organism

text: MGP PacBio

characteristic: project name

characteristic: sample derived from

text: uncultured Oscillospiraceae bacterium

text: PacBio Sequel II

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: min17_bin33


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaFlye 2.9-b1768

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

text: checkm v1.1.3

characteristic: description

text: human-associated habitat

text: human-associated habitat

text: feces

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

text: metagenome-assembled genome

text: human gut

text: human gut metagenome

text: Roseburia faecis

text: MGP PacBio

text: Roseburia faecis

text: PacBio Sequel II

text: multi-marker approach

text: Metagenome-assembled genome: min17_bin34

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INRA-META

text: public

text: metaFlye 2.9-b1768

text: MetaBAT defaults, SemiBin defaults with human_gut built-in model, metaWRAP bin_refinement module

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: human-associated habitat

characteristic: environment (biome)

text: human-associated habitat

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: human gut

characteristic: isolation source

text: human gut metagenome

characteristic: metagenomic source

text: uncultured Tenericutes bacterium

characteristic: organism

text: MGP PacBio

characteristic: project name

characteristic: sample derived from

text: uncultured Tenericutes bacterium

text: PacBio Sequel II

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: min17_bin35