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text: Chaoran Chen, Sarah Nadeau, Louis du Plessis, Catharine Aquino Fournier, Andrea Patrizia Salzmann, Henriette Kurth, Ivan Topolsky, Kim Philipp Jablonski, Lara Fuhrmann, David Dreifuss, Pelin Icer, Daniel Ehrsam, Isabel Stürmer, Andreia Cabral de Gouvea, Maria Domenica Moccia, Simon Grüter, Timothy Sykes, Lennart Opitz, Hai Bui, Christian Urban, Matteo Carrara, Shuqing Yu, Franziska Singer, Griffin White, Laura Neff, Doris Popovic, Andrea Patrignani, Jay Tracy, Ralph Schlapbach, Christiane Beckmann, Maurice Redondo, Olivier Kobel, Christoph Noppen, Niko Beerenwinkel, Tanja Stadler

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text: Labor team w AG; Blumeneggstrasse 55, 9403 Goldach

text: Ivan Topolsky, Sarah Nadeau, Chaoran Chen, Louis du Plessis, Rebekka Pohl, Monika Bucher, Andreas Lindauer, Catharine Aquino Fournier, Daniel Ehrsam, Isabel Stürmer, Andreia Cabral de Gouvea, Maria Domenica Moccia, Simon Grüter, Timothy Sykes, Lennart Opitz, Hai Bui, Christian Urban, Matteo Carrara, Shuqing Yu, Franziska Singer, Griffin White, Laura Neff, Doris Popovic, Andrea Patrignani, Jay Tracy, Ralph Schlapbach, Ivan Topolsky, Kim Philipp Jablonski, Lara Fuhrmann, David Dreifuss, Pelin Icer, Niko Beerenwinkel, Tanja Stadler

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text: University of Tartu, Estonia

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text: ena-upload-cli v0.3.1 @ Galaxy

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text: University of Tartu KoroGenoEST3 consortium, Estonia

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text: Aare Abroi, Radko Avi, Taavi Päll, Heiki Niglas , Merit Pauskar, Arina Shablinskaja, Eveli Kallas, Andrio Lahesaare, Kai Truusalu, Dagmar Hoidmets, Olga Sadikova, Kaspar Ratnik, Hanna Sepp, Liidia Dotsenko, Jevgenia Epštein, Heleene Suija, Katrin Kaarna, Lili Milani, Mait Metspalu, Ott Eric Oopkaup, Ivar Koppel, Erik Jaaniso, Ivan Kuzmin, Uku Raudvere, Tuuli Reisberg, Hedi Peterson, Ulvi Gerst Talas, Paul Naaber, Mari-Anne Härma, Irja Lutsar, Kristi Huik

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text: Nasopharyngeal/oropharyngeal swab from Estonian Covid-19 patient

characteristic: description

text: Estonia

unit: DD

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characteristic: host age

text: human

text: not provided

text: Homo sapiens

text: female

text: host subject id

characteristic: isolation source non-host-associated

text: PCR tiled amplicon WGS of SARS-Cov-2, pre-selected subset from active surveillance


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characteristic: INSDC status

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text: human

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text: host subject id

characteristic: isolation source non-host-associated


characteristic: External Id

text: SC

characteristic: INSDC center name

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text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Lighthouse Lab in Glasgow

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Samples prepared at Lighthouse Lab in Glasgow by Harper VanSteenhouse, Yumi Kasai, David Gray, Carol Clugston, Anna Dominiczak and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: Scotland

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

characteristic: INSDC status

text: SC

text: Lighthouse Lab in Milton Keynes

text: not provided

characteristic: collector name

text: Samples prepared at Lighthouse Lab in Milton Keynes by The Lighthouse Lab in Milton Keynes and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

characteristic: sample capture status

characteristic: title


characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

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text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Health Services Laboratories

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Samples prepared at Health Services Laboratories by Health Services Laboratories and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: England

text: Human

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

text: Severe acute respiratory syndrome coronavirus 2


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characteristic: ENA-FIRST-PUBLIC

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text: SC

text: public

characteristic: INSDC status

text: SC

text: Rosalind Franklin Laboratory

text: not provided

characteristic: collector name

text: Samples prepared at Rosalind Franklin Laboratory by Donald Fraser, Suki Lee, Rob Howes, The Rosalind Franklin Laboratory and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

text: active surveillance in response to outbreak


characteristic: External Id

text: SC

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text: SC

text: Lighthouse Lab in Milton Keynes

text: not provided

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Scotland

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Rosalind Franklin Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

text: United Kingdom

text: Northern Ireland

text: Human

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided