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text: Europe / Ireland / Kilkenny

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text: Europe / Ireland / Kilkenny

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text: NVRL

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text: NVRL

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text: National Virus Reference Laboratory

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characteristic: description

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characteristic: geographic location (latitude)

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text: Europe / Ireland / Louth

characteristic: geographic location (region and locality)

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text: not provided

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text: Europe / Ireland / Louth

text: human

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text: Homo sapiens

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text: hCoV-19/Ireland/LH-NVRL-S22IRL00020806/2022


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text: not provided

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text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Louth

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/LH-NVRL-S22IRL00021370/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Louth

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status

text: hCoV-19/Ireland/LH-NVRL-S22IRL00021350/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Louth

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/LH-NVRL-S22IRL00021381/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Louth

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/LH-NVRL-S22IRL00021331/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

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text: NVRL

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Louth

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/LH-NVRL-S22IRL00021324/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Meath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

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text: hCoV-19/Ireland/MH-NVRL-S22IRL00019357/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

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text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Meath

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/MH-NVRL-S22IRL00019635/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Meath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/MH-NVRL-S22IRL00020053/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

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text: NVRL

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Meath

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/MH-NVRL-S22IRL00019856/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Meath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: not provided

characteristic: host health state

text: Homo sapiens

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text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

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characteristic: organism

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text: hCoV-19/Ireland/MH-NVRL-S22IRL00020052/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

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text: NVRL

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Meath

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/MH-NVRL-S22IRL00019859/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Meath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

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text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

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text: hCoV-19/Ireland/MH-NVRL-S22IRL00020054/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

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text: NVRL

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text: public

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characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Meath

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/MH-NVRL-S22IRL00019858/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Meath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/MH-NVRL-S22IRL00019855/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

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characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Meath

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/MH-NVRL-S22IRL00019850/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Meath

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: not provided

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text: Homo sapiens

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text: male

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text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: active surveillance in response to outbreak

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text: hCoV-19/Ireland/MH-NVRL-S22IRL00019504/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Monaghan

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/MN-NVRL-S22IRL00018238/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Monaghan

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: not provided

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text: Homo sapiens

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text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

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characteristic: organism

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text: hCoV-19/Ireland/MN-NVRL-S22IRL00018220/2022

characteristic: title

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characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

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text: NVRL

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text: public

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Monaghan

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/MN-NVRL-S22IRL00018219/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Monaghan

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: not provided

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text: Homo sapiens

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text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

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text: hCoV-19/Ireland/MN-NVRL-S22IRL00018249/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

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text: NVRL

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text: public

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characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Monaghan

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/MN-NVRL-S22IRL00018247/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Monaghan

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: not provided

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text: Homo sapiens

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text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

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characteristic: organism

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text: hCoV-19/Ireland/MN-NVRL-S22IRL00018248/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Monaghan

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/MN-NVRL-S22IRL00018226/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: not provided

characteristic: host health state

text: Homo sapiens

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text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/TA-NVRL-S22IRL00020313/2022

characteristic: title

characteristic: virus identifier


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text: NVRL

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characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Tipperary

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/TA-NVRL-S22IRL00020086/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: not provided

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text: Homo sapiens

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text: male

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text: not provided

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/TA-NVRL-S22IRL00020094/2022

characteristic: title

characteristic: virus identifier


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text: NVRL

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text: public

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characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Tipperary

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/TA-NVRL-S22IRL00020324/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

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text: Homo sapiens

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text: female

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text: not provided

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text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: Severe acute respiratory syndrome coronavirus 2

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text: hCoV-19/Ireland/TA-NVRL-S22IRL00020307/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Tipperary

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/TA-NVRL-S22IRL00020312/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: not provided

characteristic: host health state

text: Homo sapiens

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text: male

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text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

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characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status

text: hCoV-19/Ireland/TA-NVRL-S22IRL00020084/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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text: hCoV-19/Switzerland/BE-IFIK-6408-8364/2022


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characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SIB

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-6409-8366/2022


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

text: SIB

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-6410-8367/2022

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-6411-8369/2022


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

text: SIB

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-6430-8611/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SIB

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-6431-8615/2022

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: sample capture status

characteristic: title


E-MTAB-11422:Sample 1

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: unige

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11422:Sample 1

characteristic: Submitter Id

unit: week

characteristic: age

text: ArrayExpress

characteristic: broker name

text: T cell

characteristic: cell type

text: house mouse

characteristic: common name

text: Protocols: CD4 T cells were isolated via FACS seven days post addition of tamoxifen. We employed intracranial (i.c.) infection of adult GFAP:GP mice with rLCMV-GP33 as an experimental model of transient viral infection of the brain to generate GP33-specific tissue-resident memory CD8+ T cells (TRM). Cross-reactivity of TRM with a CNS-restricted self-antigen was modeled by the TAM-inducible expression of LCMV glycoprotein (GP) antigens in a CNS-restricted cell population (astrocytes). For depletion of circulating CD8+ T cells or CD4+ T cells, mice were treated intraperitoneally twice over a 3 days interval with 200 μg of rat-anti-mouse-CD8α-depleting antibody (BioXCell, BE0117), 250 μg of rat-anti-mouse-CD4 -depleting antibody (home-made, clone YTS191) or isotype control (BioXCell, BE0090).Anti-CD8 was administered 7 and 4 days before start of TAM while anti-CD4 was administered 4 and 1 day prior start of TAM. For relapse experiments, mice were treated intraperitoneally with 200 μg of mouse-anti-mouse-CD8α -depleting antibody (Ab00166-2.0, Absolute Antibody) or isotype control (Ab00166-2.3, Absolute Antibody) 7 and 4 days before each TAM administration. According to 10x 5' protocol According to 10x 5' protocol

characteristic: description

text: adult

characteristic: developmental stage

text: Stop-GPflox

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

text: StopGP - no TAM reactivation

characteristic: stimulus

characteristic: strain

text: Sample 1


E-MTAB-11422:Sample 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: unige

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11422:Sample 2

text: ArrayExpress

text: T cell

text: house mouse

text: adult

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: Mus musculus

text: male

text: CD8 depletion via antibody before TAM induction

text: Sample 2

characteristic: title


E-MTAB-11422:Sample 3

characteristic: External Id

text: unige

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11422:Sample 3

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: T cell

text: house mouse

text: adult

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: male

text: CD4 and CD8 depletion via antibody before TAM induction

text: Sample 3


text: Nova Southeastern University

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: NOVA SOUTHEASTERN UNIVERSITY

characteristic: barcoding center

text: COPO

text: COLE EASSON

characteristic: collected by

text: MIDDLE TENNESSEE STATE UNIVERSITY

characteristic: collecting institution

characteristic: collection date

text: USA

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Tennessee | Rutherford County | Murfreesboro

characteristic: geographic location (region and locality)

text: River/creek

characteristic: habitat

text: DAMON STINSON | COLE EASSON

characteristic: identified by

text: MIDDLE TENNESSEE STATE UNIVERSITY

text: adult

characteristic: lifestage

text: Eunapius fragilis

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

text: Eunapius fragilis

characteristic: specimen id

characteristic: specimen voucher

text: 7c88dc95-ff77-4443-b173-a373b151ae57-ASG-specimen

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Nova Southeastern University

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOVA SOUTHEASTERN UNIVERSITY

characteristic: barcoding center

text: COPO

characteristic: broker name

text: COLE EASSON

text: MIDDLE TENNESSEE STATE UNIVERSITY

text: USA

text: River/creek

text: DAMON STINSON | COLE EASSON

text: MIDDLE TENNESSEE STATE UNIVERSITY

text: adult

text: Eunapius fragilis

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Eunapius fragilis

text: b673e883-02b6-4d3e-bdb1-0c5704393e9b-ASG-specimen

characteristic: title


text: Nova Southeastern University

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: NOVA SOUTHEASTERN UNIVERSITY

text: COPO

text: JOAQUIM GOES

characteristic: collected by

text: COLUMBIA UNIVERSITY

characteristic: collecting institution

characteristic: collection date

text: Oman

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Bandar Al Khairan

characteristic: geographic location (region and locality)

text: Coastal ocean

characteristic: habitat

text: JOAQUIM GOES | SENJIE LIN

characteristic: identified by

text: COLUMBIA UNIVERSITY | UNIVERSITY OF CONNECTICUT

text: not provided

characteristic: lifestage

text: Noctiluca scintillans

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

text: Endosymbiont

characteristic: relationship

text: Noctiluca scintillans

characteristic: specimen id

text: 8c2c9851-88d1-4454-91ea-f4aa2c215be1-ASG-specimen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Nova Southeastern University

characteristic: GAL

text: JoeLopez NSU0023201

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOVA SOUTHEASTERN UNIVERSITY

characteristic: barcoding center

text: COPO

characteristic: broker name

text: COLE EASSON

text: MIDDLE TENNESSEE STATE UNIVERSITY

text: USA

text: River/creek

text: DAMON STINSON | COLE EASSON

text: MIDDLE TENNESSEE STATE UNIVERSITY

text: adult

text: Eunapius fragilis

characteristic: organism

text: **OTHER SOMATIC ANIMAL TISSUE**

text: ASG

characteristic: sample derived from

text: Eunapius fragilis

characteristic: specimen voucher

text: N

characteristic: symbiont

text: a00df41a-4f60-406c-bac6-23bab1be4e27-asg

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Nova Southeastern University

text: JoeLopez NSU0023201

text: EarlhamInstitute

text: public

text: NOVA SOUTHEASTERN UNIVERSITY

text: COPO

text: COLE EASSON

characteristic: collected by

text: MIDDLE TENNESSEE STATE UNIVERSITY

characteristic: collecting institution

characteristic: collection date

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: River/creek

characteristic: habitat

text: DAMON STINSON | COLE EASSON

characteristic: identified by

text: MIDDLE TENNESSEE STATE UNIVERSITY

text: adult

characteristic: lifestage

text: Eunapius fragilis

text: **OTHER SOMATIC ANIMAL TISSUE**

characteristic: organism part

text: ASG

characteristic: project name

text: Eunapius fragilis

characteristic: specimen id

text: N

text: 87b5171b-0f97-48d0-8ed7-08800eb6dafa-asg

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Nova Southeastern University

characteristic: GAL

text: JoeLopez NSU0023201

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOVA SOUTHEASTERN UNIVERSITY

characteristic: barcoding center

text: COPO

characteristic: broker name

text: COLE EASSON

text: MIDDLE TENNESSEE STATE UNIVERSITY

text: USA

text: River/creek

text: DAMON STINSON | COLE EASSON

text: MIDDLE TENNESSEE STATE UNIVERSITY

text: adult

text: Eunapius fragilis

characteristic: organism

text: **OTHER SOMATIC ANIMAL TISSUE**

text: ASG

characteristic: sample derived from

text: Eunapius fragilis

characteristic: specimen voucher

text: N

characteristic: symbiont

text: ededc65f-047d-46bc-87ab-52b6679b0aba-asg

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Nova Southeastern University

text: JoeLopez NSU0023202

text: EarlhamInstitute

text: public

text: NOVA SOUTHEASTERN UNIVERSITY

text: COPO

text: COLE EASSON

characteristic: collected by

text: MIDDLE TENNESSEE STATE UNIVERSITY

characteristic: collecting institution

characteristic: collection date

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: River/creek

characteristic: habitat

text: DAMON STINSON | COLE EASSON

characteristic: identified by

text: MIDDLE TENNESSEE STATE UNIVERSITY

text: adult

characteristic: lifestage

text: Eunapius fragilis

text: **OTHER SOMATIC ANIMAL TISSUE**

characteristic: organism part

text: ASG

characteristic: project name

text: Eunapius fragilis

characteristic: specimen id

text: N

text: 12008dea-30d4-4bea-973e-8ed83b699996-asg

characteristic: title