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characteristic: External Id

text: public

characteristic: SRA accession

tag: Namespace:Institute of Medical Virology, Zürich, Switzerland

characteristic: Submitter Id

text: SIB

text: Universität Zürich, Zürich, Switzerland

text: Verena Kufner, Gabriela Ziltener, Maryam Zaheri, Stefan Schmutz, Annette Audigé, Maria Grünberg, Kevin Steiner, Jon Huder, Cyril Shah, Riccarda Capaul, Guido Bloemberg, Jürg Böni, Michael Huber, Alexandra Trkola

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-461a12df/2022

characteristic: isolate

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text: active surveillance in response to outbreak

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status: PUBLIC

tag: attribute

characteristic: GISAID Accession ID

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tag: Namespace:Center for Laboratory Medicine St. Gallen

text: SIB

characteristic: broker name

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characteristic: collecting institution

characteristic: collection date

text: Yannick Gerth

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: SG

characteristic: geographic location (region and locality)

text: Human

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text: restricted access

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text: Homo sapiens

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text: restricted access

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text: Severe acute respiratory syndrome coronavirus 2


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characteristic: External Id

text: NVRL

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cavan

unit: year

characteristic: host age

text: human

text: not provided

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text: male

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text: hCoV-19/Ireland/CN-NVRL-S22IRL00017984/2022

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text: not provided

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text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

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characteristic: ENA-FIRST-PUBLIC

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characteristic: SRA accession

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text: National Virus Reference Laboratory

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characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cavan

characteristic: host age

text: human

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text: hCoV-19/Ireland/CN-NVRL-S22IRL00017955/2022

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text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

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text: Homo sapiens

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text: not provided

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text: hCoV-19/Ireland/CN-NVRL-S22IRL00017936/2022


characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

text: NVRL

text: public

characteristic: SRA accession

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cavan

characteristic: host age

text: human

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text: Homo sapiens

text: male

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text: hCoV-19/Ireland/CN-NVRL-S22IRL00018036/2022

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characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

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text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CN-NVRL-S22IRL00017937/2022


characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

text: NVRL

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cavan

characteristic: host age

text: human

text: not provided

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text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

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text: hCoV-19/Ireland/CN-NVRL-S22IRL00018328/2022

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text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

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text: Homo sapiens

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text: not provided

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text: hCoV-19/Ireland/CN-NVRL-S22IRL00018034/2022


characteristic: ENA-FIRST-PUBLIC

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text: NVRL

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characteristic: SRA accession

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

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characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cavan

characteristic: host age

text: human

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text: hCoV-19/Ireland/CN-NVRL-S22IRL00017969/2022

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characteristic: broker name

text: National Virus Reference Laboratory

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characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

text: human

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text: not provided

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text: hCoV-19/Ireland/CN-NVRL-S22IRL00017944/2022


characteristic: ENA-FIRST-PUBLIC

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text: NVRL

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characteristic: SRA accession

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

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characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cavan

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text: National Virus Reference Laboratory

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text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

text: human

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text: not provided

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text: hCoV-19/Ireland/CN-NVRL-S22IRL00018343/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cavan

characteristic: host age

text: human

text: not provided

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text: not provided

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text: not provided

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text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

text: human

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text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CN-NVRL-S22IRL00017965/2022


characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

text: NVRL

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

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characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cavan

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text: female

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text: Severe acute respiratory syndrome coronavirus 2

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characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

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characteristic: collector name

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

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text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CN-NVRL-S22IRL00018032/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

text: public

characteristic: SRA accession

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cavan

characteristic: host age

text: human

text: not provided

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text: hCoV-19/Ireland/CN-NVRL-S22IRL00018326/2022

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text: National Virus Reference Laboratory

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text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

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text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CN-NVRL-S22IRL00017985/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

text: public

characteristic: SRA accession

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

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characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cavan

characteristic: host age

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characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

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text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CN-NVRL-S22IRL00018335/2022


characteristic: ENA-FIRST-PUBLIC

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text: NVRL

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

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characteristic: common name

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text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cavan

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characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

text: human

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text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CN-NVRL-S22IRL00017968/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

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characteristic: SRA accession

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

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characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: host age

text: human

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text: not provided

text: Homo sapiens

text: female

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text: hCoV-19/Ireland/CW-NVRL-S22IRL00018399/2022

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characteristic: broker name

text: National Virus Reference Laboratory

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characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

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characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CW-NVRL-S22IRL00018387/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CW-NVRL-S22IRL00018366/2022

characteristic: title

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characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

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characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CW-NVRL-S22IRL00018359/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: active surveillance in response to outbreak

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text: hCoV-19/Ireland/CW-NVRL-S22IRL00018391/2022

characteristic: title

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characteristic: broker name

text: National Virus Reference Laboratory

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characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

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text: Homo sapiens

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text: Oro-Nasopharyngeal swab

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characteristic: ENA-FIRST-PUBLIC

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text: NVRL

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

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characteristic: common name

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text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: host age

text: human

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text: Homo sapiens

text: female

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text: Severe acute respiratory syndrome coronavirus 2

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text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

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characteristic: ENA-FIRST-PUBLIC

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characteristic: common name

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text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

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text: Europe / Ireland / Carlow

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characteristic: common name

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text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

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characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

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characteristic: ENA-FIRST-PUBLIC

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text: NVRL

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characteristic: common name

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text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

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text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

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characteristic: ENA-FIRST-PUBLIC

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text: NVRL

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text: Irish Consortium for Sequencing Covid

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characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

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text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

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text: Homo sapiens

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text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CW-NVRL-S22IRL00020021/2022


characteristic: ENA-FIRST-PUBLIC

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text: NVRL

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characteristic: common name

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text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

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text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

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text: Oro-Nasopharyngeal swab

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characteristic: ENA-FIRST-PUBLIC

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text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

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text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

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characteristic: ENA-FIRST-PUBLIC

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text: NVRL

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characteristic: common name

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text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

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text: Severe acute respiratory syndrome coronavirus 2

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text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

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characteristic: ENA-FIRST-PUBLIC

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text: NVRL

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text: Ireland

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text: Europe / Ireland / Carlow

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text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

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characteristic: ENA-FIRST-PUBLIC

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text: NVRL

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text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

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text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

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characteristic: ENA-FIRST-PUBLIC

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text: NVRL

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text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

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characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

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text: hCoV-19/Ireland/CW-NVRL-S22IRL00020865/2022


characteristic: ENA-FIRST-PUBLIC

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text: NVRL

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characteristic: common name

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text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: host age

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characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

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text: hCoV-19/Ireland/CW-NVRL-S22IRL00021105/2022


characteristic: ENA-FIRST-PUBLIC

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text: NVRL

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text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

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text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

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text: Homo sapiens

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text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CW-NVRL-S22IRL00020893/2022


characteristic: ENA-FIRST-PUBLIC

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text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: host age

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text: not provided

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text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

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text: Homo sapiens

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text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CW-NVRL-S22IRL00020873/2022


characteristic: ENA-FIRST-PUBLIC

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text: NVRL

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characteristic: common name

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text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

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text: Severe acute respiratory syndrome coronavirus 2

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text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CW-NVRL-S22IRL00019645/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CW-NVRL-S22IRL00020880/2022

characteristic: title

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text: NVRL

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characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CW-NVRL-S22IRL00020969/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: host age

text: human

text: not provided

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text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CW-NVRL-S22IRL00021019/2022

characteristic: title

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text: NVRL

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characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

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text: Homo sapiens

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text: male

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text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CW-NVRL-S22IRL00020866/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: host age

text: human

text: not provided

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text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CW-NVRL-S22IRL00021012/2022

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text: National Virus Reference Laboratory

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text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

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text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CW-NVRL-S22IRL00021135/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: host age

text: human

text: not provided

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text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

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text: hCoV-19/Ireland/CW-NVRL-S22IRL00020887/2022

characteristic: title

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text: NVRL

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text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

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text: Homo sapiens

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text: male

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text: not provided

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text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CW-NVRL-S22IRL00019646/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

text: public

characteristic: SRA accession

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: host age

text: human

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text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

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text: hCoV-19/Ireland/CW-NVRL-S22IRL00019839/2022

characteristic: title

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text: NVRL

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text: National Virus Reference Laboratory

characteristic: collecting institution

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text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

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text: Homo sapiens

characteristic: host scientific name

text: female

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text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CW-NVRL-S22IRL00020889/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

text: public

characteristic: SRA accession

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: host age

text: human

text: not provided

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text: not provided

text: Homo sapiens

text: female

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text: active surveillance in response to outbreak

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text: hCoV-19/Ireland/CW-NVRL-S22IRL00020872/2022

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characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

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text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

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text: Homo sapiens

characteristic: host scientific name

text: male

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text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CW-NVRL-S22IRL00021278/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

text: public

characteristic: SRA accession

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: host age

text: human

text: not provided

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text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

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text: hCoV-19/Ireland/CW-NVRL-S22IRL00019878/2022

characteristic: title

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characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: not provided

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text: Homo sapiens

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text: female

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text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CW-NVRL-S22IRL00020888/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: host age

text: human

text: not provided

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text: not provided

text: Homo sapiens

text: male

text: not provided

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characteristic: isolation source host associated

characteristic: organism

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text: hCoV-19/Ireland/CW-NVRL-S22IRL00020971/2022

characteristic: title

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text: National Virus Reference Laboratory

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text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

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text: Homo sapiens

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text: male

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text: not provided

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text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CW-NVRL-S22IRL00020874/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: host age

text: human

text: not provided

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text: not provided

text: Homo sapiens

text: female

text: not provided

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characteristic: isolation source host associated

characteristic: organism

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text: hCoV-19/Ireland/CW-NVRL-S22IRL00020967/2022

characteristic: title

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text: NVRL

characteristic: INSDC center name

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text: National Virus Reference Laboratory

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text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

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text: Homo sapiens

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text: female

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text: not provided

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text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CW-NVRL-S22IRL00021011/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: host age

text: human

text: not provided

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text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CW-NVRL-S22IRL00020974/2022

characteristic: title

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text: NVRL

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characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

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text: Homo sapiens

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text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CW-NVRL-S22IRL00020966/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

text: not provided

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text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

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text: hCoV-19/Ireland/D-NVRL-S22IRL00018212/2022

characteristic: title

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text: NVRL

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characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

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characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

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text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00018190/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00018186/2022

characteristic: title

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text: NVRL

characteristic: INSDC center name

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characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

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characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00019762/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

text: not provided

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text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: active surveillance in response to outbreak

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text: hCoV-19/Ireland/D-NVRL-S22IRL00020118/2022

characteristic: title

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text: NVRL

characteristic: INSDC center name

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

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characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00020116/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00019751/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

text: NVRL

characteristic: INSDC center name

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characteristic: INSDC last update

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characteristic: INSDC status

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00019765/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00019754/2022

characteristic: title

characteristic: virus identifier


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text: not provided

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text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

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text: human

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text: Homo sapiens

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text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00019473/2022


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text: National Virus Reference Laboratory

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text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

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text: Europe / Ireland / Dublin

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characteristic: ENA-FIRST-PUBLIC

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text: Europe / Ireland / Dublin

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text: hCoV-19/Ireland/D-NVRL-S22IRL00019758/2022

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text: Center for Laboratory Medicine St. Gallen

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text: Yannick Gerth

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characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

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text: hCoV-19/Ireland/D-NVRL-S22IRL00019764/2022

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text: Europe / Ireland / Dublin

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characteristic: ENA-FIRST-PUBLIC

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

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text: active surveillance in response to outbreak

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text: hCoV-19/Ireland/D-NVRL-S22IRL00019486/2022

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characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

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text: hCoV-19/Ireland/D-NVRL-S22IRL00019860/2022


characteristic: ENA-FIRST-PUBLIC

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text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

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text: Severe acute respiratory syndrome coronavirus 2

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text: hCoV-19/Ireland/D-NVRL-S22IRL00019488/2022

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text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

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characteristic: ENA-FIRST-PUBLIC

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text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

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characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00020403/2022

characteristic: title

characteristic: virus identifier