WT-SL H3K27me3 rep3

text: Tianjin Medical University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: WT-SL H3K27me3 rep3

text: house mouse

text: China

text: TianJin

characteristic: geographic location (region and locality)

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq


MT-2i Ezh2 rep2

status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Tianjin Medical University

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MT-2i Ezh2 rep2

tag: Namespace:Tianjin Medical University

characteristic: Submitter Id

text: house mouse

characteristic: common name

text: ES cells cultured in 2i or SL medium were used for ChIP-Seq

characteristic: description

text: China

characteristic: geographic location (country and/or sea)

text: TianJin

text: mESCs

characteristic: isolate

text: Mus musculus

characteristic: organism

text: ES cells cultured in 2i or SL medium were crosslinked for 10 min with 1% formaldehyde at RT, followed by adding glycine to 0.125M at final concentration and incubation for another 5 min to stop fixation.Then cells were rinsed twice with PBS and cell pellets were resuspended in SDS buffer (1% SDS, 5 mM EDTA, 100 mM NaCl, 0.02% NaN3, 50 mM Tris-HCl, pH 8.1, 1��PIC and 1��PMSF). After the lysis, nuclei were obtained by spinning at 1200 rpm for 6 min and resuspended in appropriate volume of ice-cold IP Buffer (SDS Buffer: Triton Dilution Buffer (100 mM Tris-HCl, pH 8.6, 100 mM NaCl, 5 mM EDTA, 5% Triton X-100, 0.02% NaN3, 1��PIC and 1��PMSF) =1:1) for sonication. The sonication was optimized to enrich chromatin fragments with an average length of 200-500 bp. If an optimal sonication was achieved, the chromatin samples were diluted with IP buffer to a desired concentration. Then primary antibodies were added and incubated overnight at 4��C rotating. On the next day, 30-40 ��l of protein A/G magnetic beads were add and incubate 2-4 hrs at 4��C. Then the beads were washed one with 150 mM wash buffer (1% Triton X-100, 0.1% SDS, 150 mM NaCl, 2 mM EDTA, pH 8.0, 20 mM Tris-HCl, pH 8.0) and three times with 500 mM wash buffer (1% Triton X-100, 0.1% SDS, 500 mM NaCl, 2 mM EDTA, pH 8.0, 20 mM Tris-HCl, pH 8.0). After the washes, the beads were added 120 ��l of de-crosslink buffer and incubated 3 hrs up to overnight at 65��C (shaking at 1,100 rpm) to elute DNA from beads. Then the input and ChIP DNA was purified with QIAGEN PCR purification kit.

characteristic: protocol

characteristic: receipt date

text: Mus musculus

text: mESCs ChIP-seq

characteristic: title


MT-2i Ezh2 rep3

text: Tianjin Medical University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: MT-2i Ezh2 rep3

text: house mouse

text: China

text: TianJin

characteristic: geographic location (region and locality)

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq


WT-2i Ezh2 rep1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Tianjin Medical University

text: public

text: WT-2i Ezh2 rep1

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq


WT-2i Ezh2 rep2

characteristic: External Id

text: Tianjin Medical University

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: WT-2i Ezh2 rep2

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq


WT-2i Ezh2 rep3

text: Tianjin Medical University

text: public

characteristic: SRA accession

text: WT-2i Ezh2 rep3

characteristic: Submitter Id

text: house mouse

characteristic: common name

text: China

text: TianJin

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq


MT-SL Ezh2 rep1

text: Tianjin Medical University

text: public

text: MT-SL Ezh2 rep1

text: house mouse

characteristic: description

text: China

characteristic: geographic location (country and/or sea)

text: TianJin

text: mESCs

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq


MT-SL Ezh2 rep2

text: Tianjin Medical University

text: public

text: MT-SL Ezh2 rep2

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

characteristic: organism

characteristic: protocol

characteristic: receipt date

text: Mus musculus

text: mESCs ChIP-seq


MT-SL Ezh2 rep3

text: Tianjin Medical University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: MT-SL Ezh2 rep3

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq

characteristic: title


WT-SL Ezh2 rep1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Tianjin Medical University

text: public

text: WT-SL Ezh2 rep1

text: house mouse

text: China

text: TianJin

characteristic: geographic location (region and locality)

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq


WT-SL Ezh2 rep2

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Tianjin Medical University

characteristic: INSDC last update

text: public

text: WT-SL Ezh2 rep2

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq


MT-2i Kdm2b rep1

text: Tianjin Medical University

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MT-2i Kdm2b rep1

characteristic: Submitter Id

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq


MT-2i Kdm2b rep2

text: Tianjin Medical University

text: public

text: MT-2i Kdm2b rep2

text: house mouse

characteristic: common name

characteristic: description

text: China

characteristic: geographic location (country and/or sea)

text: TianJin

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq


WT-2i Kdm2b rep1

text: Tianjin Medical University

text: public

text: WT-2i Kdm2b rep1

text: house mouse

text: China

text: TianJin

text: mESCs

characteristic: isolate

text: Mus musculus

characteristic: organism

characteristic: protocol

text: Mus musculus

text: mESCs ChIP-seq


WT-2i Kdm2b rep2

text: Tianjin Medical University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: WT-2i Kdm2b rep2

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

characteristic: receipt date

text: Mus musculus

text: mESCs ChIP-seq


MT-2i Ring1b rep1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Tianjin Medical University

text: public

text: MT-2i Ring1b rep1

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq

characteristic: title


WT-2i Ring1b rep1

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Tianjin Medical University

text: public

text: WT-2i Ring1b rep1

text: house mouse

text: China

text: TianJin

characteristic: geographic location (region and locality)

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq


MT-SL Ring1b rep1

text: Tianjin Medical University

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: MT-SL Ring1b rep1

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq


WT-SL Ring1b rep1

text: Tianjin Medical University

text: public

text: WT-SL Ring1b rep1

characteristic: Submitter Id

text: house mouse

characteristic: common name

characteristic: description

text: China

text: TianJin

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq


MT-2i Brg1 rep1

text: Tianjin Medical University

text: public

text: MT-2i Brg1 rep1

text: house mouse

text: China

characteristic: geographic location (country and/or sea)

text: TianJin

text: mESCs

characteristic: isolate

text: Mus musculus

characteristic: organism

text: Mus musculus

text: mESCs ChIP-seq


MT-2i Brg1 rep2

text: Tianjin Medical University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: MT-2i Brg1 rep2

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

characteristic: protocol

text: Mus musculus

text: mESCs ChIP-seq


WT-2i Brg1 rep1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Tianjin Medical University

text: public

text: WT-2i Brg1 rep1

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

characteristic: receipt date

text: Mus musculus

text: mESCs ChIP-seq


WT-2i Brg1 rep2

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Tianjin Medical University

text: public

text: WT-2i Brg1 rep2

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq

characteristic: title


MT-SL Brg1 rep1

text: Tianjin Medical University

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: MT-SL Brg1 rep1

text: house mouse

text: China

text: TianJin

characteristic: geographic location (region and locality)

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq


MT-SL Brg1 rep2

text: Tianjin Medical University

text: public

characteristic: SRA accession

text: MT-SL Brg1 rep2

characteristic: Submitter Id

text: house mouse

characteristic: common name

text: China

text: TianJin

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq


WT-SL Brg1 rep1

text: Tianjin Medical University

text: public

text: WT-SL Brg1 rep1

text: house mouse

characteristic: description

text: China

characteristic: geographic location (country and/or sea)

text: TianJin

text: mESCs

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq


WT-SL Brg1 rep2

text: Tianjin Medical University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: WT-SL Brg1 rep2

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

characteristic: organism

text: Mus musculus

text: mESCs ChIP-seq


MT-2i H3K36me2 rep1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Tianjin Medical University

text: public

text: MT-2i H3K36me2 rep1

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

characteristic: protocol

text: Mus musculus

text: mESCs ChIP-seq


WT-2i H3K36me2 rep1

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Tianjin Medical University

text: public

text: WT-2i H3K36me2 rep1

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

characteristic: receipt date

text: Mus musculus

text: mESCs ChIP-seq


MT-SL H3K36me2 rep1

text: Tianjin Medical University

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: MT-SL H3K36me2 rep1

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq

characteristic: title


MT-SL H3K36me2 rep2

text: Tianjin Medical University

text: public

characteristic: SRA accession

text: MT-SL H3K36me2 rep2

characteristic: Submitter Id

text: house mouse

text: China

text: TianJin

characteristic: geographic location (region and locality)

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq


MT-SL H3K36me2 rep3

text: Tianjin Medical University

text: public

text: MT-SL H3K36me2 rep3

text: house mouse

characteristic: common name

characteristic: description

text: China

characteristic: geographic location (country and/or sea)

text: TianJin

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq


WT-SL H3K36me2 rep1

text: Tianjin Medical University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: WT-SL H3K36me2 rep1

text: house mouse

text: China

text: TianJin

text: mESCs

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq


WT-SL H3K36me2 rep2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Tianjin Medical University

text: public

text: WT-SL H3K36me2 rep2

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

characteristic: organism

text: Mus musculus

text: mESCs ChIP-seq


WT-SL H3K36me2 rep3

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Tianjin Medical University

text: public

text: WT-SL H3K36me2 rep3

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

characteristic: protocol

text: Mus musculus

text: mESCs ChIP-seq


MT-2i H3K27me3 rep1

text: Tianjin Medical University

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: MT-2i H3K27me3 rep1

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

characteristic: receipt date

text: Mus musculus

text: mESCs ChIP-seq


WT-2i H3K27me3 rep1

text: Tianjin Medical University

text: public

characteristic: SRA accession

text: WT-2i H3K27me3 rep1

characteristic: Submitter Id

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq

characteristic: title


MT-SL H3K27me3 rep1

text: Tianjin Medical University

text: public

text: MT-SL H3K27me3 rep1

text: house mouse

characteristic: common name

characteristic: description

text: China

text: TianJin

characteristic: geographic location (region and locality)

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq


WT-SL H3K27me3 rep1

text: Tianjin Medical University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: WT-SL H3K27me3 rep1

text: house mouse

text: China

characteristic: geographic location (country and/or sea)

text: TianJin

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq


MT-2i H2AK119ub1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Tianjin Medical University

text: public

text: MT-2i H2AK119ub1

text: house mouse

text: China

text: TianJin

text: mESCs

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: mESCs ChIP-seq


WT-2i H2AK119ub1

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Tianjin Medical University

text: public

text: WT-2i H2AK119ub1

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

characteristic: organism

text: Mus musculus

text: mESCs ChIP-seq


MT-SL H2AK119ub1

text: Tianjin Medical University

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: MT-SL H2AK119ub1

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

characteristic: protocol

text: Mus musculus

text: mESCs ChIP-seq


WT-SL H2AK119ub1

text: Tianjin Medical University

text: public

characteristic: SRA accession

text: WT-SL H2AK119ub1

characteristic: Submitter Id

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

characteristic: receipt date

text: Mus musculus

text: mESCs ChIP-seq


MT-2i ATAC-seq rep1

text: Tianjin Medical University

text: public

text: MT-2i ATAC-seq rep1

text: house mouse

characteristic: common name

text: China

text: TianJin

text: mESCs

text: Mus musculus

text: 50,000 mES cells were used for ATAC-seq. After washed by PBS, the cells or epiblasts were resuspended in lysis buffer (10 mM Tris-HCl, pH 7.5, 10 mM NaCl, 3 mM MgCl2, 0.1%(v/v) igepal CA-630 and 1x PIC). After 10 min incubation on ice, cells were spinned down by centrifugation at 500g, 4～C. Then the pellets were resuspended in transposome mix (37 ml ddH2O, 10 ml 5℅TTBL, 3 ml TTE mixV50 (TD501, Vazyme)) and gently flicked. The reaction was incubated at 37～C for 0.5 h in a PCR cycler, before 1 ml 0.5M EDTA, 1 ml proteinase K (20 mg/ml) and 5 ml 10% SDS were added to stop the reaction. After another incubation at 50～C for 1 h, DNA was purified with PCI and resuspended with 30 ml ddH2O. 15 mL DNA were amplified with i5 and i7 primers (Vazyme, TD202) and KAPA 2℅PCR mix (KM2602) following the cycling program with heated lid, 72～C, 5min; 98～C, 30s; 10 cycles for 98～C, 10s; 60～C, 30s; 72～C,30s; and 72～C for 5min, hold at 4～C. Upon the program completed, 0.5 volume (25 mL) Ampure XP beads were added to remove fragments above 1 Kb and another 0.5 volume (25 mL) Ampure XP beads were added to collect the 200-1,000bp fragments for sequencing.

text: Mus musculus

text: mESCs ATAC-seq

characteristic: title


MT-SL ATAC-seq rep1

text: Tianjin Medical University

characteristic: INSDC center name

text: public

text: MT-SL ATAC-seq rep1

text: house mouse

text: China

text: TianJin

characteristic: geographic location (region and locality)

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ATAC-seq


WT-2i ATAC-seq rep1

text: Tianjin Medical University

characteristic: INSDC first public

text: public

text: WT-2i ATAC-seq rep1

text: house mouse

text: China

characteristic: geographic location (country and/or sea)

text: TianJin

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ATAC-seq


WT-SL ATAC-seq rep1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Tianjin Medical University

text: public

text: WT-SL ATAC-seq rep1

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ATAC-seq


MT-2i ATAC-seq rep2

characteristic: ENA-LAST-UPDATE

text: Tianjin Medical University

text: public

text: MT-2i ATAC-seq rep2

text: house mouse

text: China

text: TianJin

text: mESCs

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: mESCs ATAC-seq


MT-SL ATAC-seq rep2

characteristic: External Id

text: Tianjin Medical University

text: public

text: MT-SL ATAC-seq rep2

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

characteristic: organism

text: Mus musculus

text: mESCs ATAC-seq


WT-2i ATAC-seq rep2

text: Tianjin Medical University

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: WT-2i ATAC-seq rep2

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs ATAC-seq


WT-SL ATAC-seq rep2

text: Tianjin Medical University

text: public

characteristic: SRA accession

text: WT-SL ATAC-seq rep2

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

characteristic: protocol

text: Mus musculus

text: mESCs ATAC-seq


MT-2i RNA-seq rep1

text: Tianjin Medical University

text: public

text: MT-2i RNA-seq rep1

characteristic: Submitter Id

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

text: Total RNA was extracted with TRIzol and used for RNA-seq

characteristic: receipt date

text: Mus musculus

text: mESCs-RNA seq


MT-2i RNA-seq rep2

text: Tianjin Medical University

text: public

text: MT-2i RNA-seq rep2

text: house mouse

characteristic: common name

text: China

text: TianJin

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs-RNA seq

characteristic: title


MT-SL RNA-seq rep1

text: Tianjin Medical University

characteristic: INSDC center name

text: public

text: MT-SL RNA-seq rep1

text: house mouse

text: China

text: TianJin

characteristic: geographic location (region and locality)

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs-RNA seq


MT-SL RNA-seq rep2

text: Tianjin Medical University

characteristic: INSDC first public

text: public

text: MT-SL RNA-seq rep2

text: house mouse

text: China

characteristic: geographic location (country and/or sea)

text: TianJin

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs-RNA seq


WT-2i RNA-seq rep1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Tianjin Medical University

text: public

text: WT-2i RNA-seq rep1

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs-RNA seq


WT-2i RNA-seq rep2

characteristic: ENA-LAST-UPDATE

text: Tianjin Medical University

text: public

text: WT-2i RNA-seq rep2

text: house mouse

text: China

text: TianJin

text: mESCs

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: mESCs-RNA seq


WT-SL RNA-seq rep1

characteristic: External Id

text: Tianjin Medical University

text: public

text: WT-SL RNA-seq rep1

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

characteristic: organism

text: Mus musculus

text: mESCs-RNA seq


WT-SL RNA-seq rep2

text: Tianjin Medical University

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: WT-SL RNA-seq rep2

text: house mouse

text: China

text: TianJin

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs-RNA seq


WT E6.5 Epi H3K27me3

text: Tianjin Medical University

text: public

characteristic: SRA accession

text: WT E6.5 Epi H3K27me3

text: house mouse

text: China

text: TianJin

text: E6.5 epiblast

text: Mus musculus

text: In brief, 10,000-50,000 cells were harvested and washed twice in 1 mL wash buffer (20 mM HEPES PH 7.5, 150 mM NaCl, 0.5 mM Spermidine, 1℅Protease Inhibitor Cocktail (PIC, Bimake), and then resuspended in 300 mL wash buffer. Concanavalin A coated beads were activated by washing twice in binding buffer (20 mM HEPES pH 7.5, 10 mM KCl, 1mM MnCl2, 1mM CaCl2). Then 10 mL activated beads were added to the resuspended cells and incubated for 30 min at room temperature (RT). The supernatant was removed and beads were resuspended in 50 mL antibody buffer (20 mM HEPES pH 7.5,150 mM NaCl, 0.5 mM Spermidine, 0.0125% Digitonin, 2 mM EDTA, 0.1% BSA, 1℅PIC). Then 0.5 mL primary antibody was added and incubated for 2 hours (hrs) at RT. After the supernatant was gently removed by placing the tubes on magnet, the beads were resuspended in 100 mL Dig wash buffer (20 mM HEPES pH 7.5,150 mM NaCl, 0.5 mM Spermidine, 0.0125% Digitonin, 1xPIC) which contains 1 mL Guinea Pig anti-Rabbit IgG antibody and incubated for 1 hr at RT. After being washed three times in 800 mL Dig wash buffer, the beads were resuspended in 100 mL Dig 300 wash buffer (20 mM HEPES pH 7.5, 300 mM NaCl, 0.5mM Spermidine, 0.0125% Digitonin, 1xPIC), and 0.04 mM pA-Tn5 adapter complex (Vazyme S603) was added and incubated for 1 hr at RT. Beads were washed three times in 800 mL Dig 300 wash buffer and resuspended in 300 mL tagmentation buffer (20 mM HEPES pH 7.5, 300 mM NaCl, 0.5 mM Spermidine, 0.0125% Digitonin, 10 mM MgCl2, 1xPIC) and incubated for 1 hr at 37～C. Then 10 mL of 0.5 M EDTA, 3 mL of 10% SDS and 1 mL of 20 mg/mL Proteinase K were added and incubated at 55～C for 1 hr to stop tagmentation before DNA extraction by PCI. The purified DNA was amplified with i5 and i7 primer, KAPA 2x PCR mix (KM2602), under the cycling program with heated lid, 72～C, 5min; 98～C, 30s; 17cycles for 98～C, 10s; 60～C, 30s; 72～C,30s; and 72～C for 5min, hold at 4～C. After the program was completed, 0.5 volume (25 mL) Ampure XP beads were added to remove fragments above 1 kb and another 0.5 volume (25 mL) Ampure XP beads were added to enrich the 200-1,000bp fragments for sequencing. The constructed libraries were sequenced with PE150 on NovaSeq platform.

characteristic: protocol

text: Mus musculus

text: E6.5 epiblast Cut&tag


MT E6.5 Epi H3K27me3

text: Tianjin Medical University

text: public

text: MT E6.5 Epi H3K27me3

characteristic: Submitter Id

text: house mouse

text: China

text: TianJin

text: E6.5 epiblast

text: Mus musculus

characteristic: receipt date

text: Mus musculus

text: E6.5 epiblast Cut&tag


MT-SL WGBS

text: Tianjin Medical University

text: public

text: MT-SL WGBS

text: house mouse

characteristic: common name

text: China

text: TianJin

text: mESCs

text: Mus musculus

text: mESCs cultured in SL medium were used for WGBS and genome DNA were purified by FastPure Cell/Tissue DNA Isolation Mini Kit(Vazyme, DC102)

text: Mus musculus

text: mESCs-WGBS

characteristic: title


WT-SL WGBS

text: Tianjin Medical University

characteristic: INSDC center name

text: public

text: WT-SL WGBS

text: house mouse

text: China

text: TianJin

characteristic: geographic location (region and locality)

text: mESCs

text: Mus musculus

text: Mus musculus

text: mESCs-WGBS


text: NORWEGIAN UNIVERSITY OF LIFE SCIENCES

characteristic: INSDC first public

text: public

tag: Namespace:NORWEGIAN UNIVERSITY OF LIFE SCIENCES

characteristic: collection date

text: mouse-gut associated

characteristic: environment (biome)

text: enrichment

characteristic: environment (feature)

text: minimal medium supplemented with xanthan gum

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: metagenome

characteristic: project name

text: metagenome

text: Illumina HiSeq 4000

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF ZURICH

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF ZURICH

characteristic: Submitter Id

text: P. veris individual used for the genome assembly. This plant was obtained by crossing T2BD4 (S-morph) with P20031403 (L-morph).

characteristic: description

characteristic: estimated size

text: S-morph (thrum)

characteristic: floral morph

text: Switzerland

text: glasshouse

characteristic: growth facility

text: Please refer to the associated publication for details on the DNA isolation method used.

characteristic: isolation and growth condition

text: Primula veris

characteristic: organism

text: cowslip

characteristic: organism common name

text: adult

characteristic: plant developmental stage

text: soil

characteristic: plant growth medium

text: leaf

characteristic: plant structure

text: diploid

characteristic: ploidy

text: Primula veris

text: P. veris genome plant


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF ZURICH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: collection date

text: P. veris S-morph (thrum) individual that was crossed with P20031403 to generate the F1 individual used for the genome assembly (F1T78).

text: S-morph (thrum)

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: glasshouse

text: Primula veris

text: cowslip

text: adult

text: soil

text: leaf

text: diploid

text: Primula veris

text: Maternal parent of the P. veris genome plant

characteristic: title


characteristic: External Id

text: UNIVERSITY OF ZURICH

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: P. veris L-morph (pin) individual that was crossed with T2BD4 to generate the F1 individual used for the genome assembly (F1T78).

characteristic: description

characteristic: estimated size

text: L-morph (thrum)

characteristic: floral morph

text: Switzerland

text: glasshouse

characteristic: growth facility

characteristic: isolation and growth condition

text: Primula veris

text: cowslip

text: adult

text: soil

text: leaf

text: diploid

text: Primula veris

text: Paternal parent of the P. veris genome plant


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF ZURICH

characteristic: INSDC center name

text: public

text: Seeds from Armenia grown at the Botanical Garden of the University of Zurich.

text: S-morph (thrum)

text: Switzerland

text: glasshouse

text: Primula veris

characteristic: organism

text: cowslip

characteristic: organism common name

text: adult

characteristic: plant developmental stage

text: soil

characteristic: plant growth medium

text: leaf

characteristic: plant structure

text: diploid

characteristic: ploidy

text: Primula veris

text: P. veris S-morph plant from Armenia


characteristic: External Id

text: UNIVERSITY OF ZURICH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: Leaf tissue collected in the field.

text: S-morph (thrum)

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: field

text: Primula veris

text: cowslip

text: adult

text: soil

text: leaf

text: diploid

text: Primula veris

text: P. veris S-morph plant from UK

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF ZURICH

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Seeds from Estonia grown at the Botanical Garden of the University of Zurich.

characteristic: description

characteristic: estimated size

text: S-morph (thrum)

characteristic: floral morph

text: Switzerland

text: glasshouse

characteristic: growth facility

characteristic: isolation and growth condition

text: Primula veris

text: cowslip

text: adult

text: soil

text: leaf

text: diploid

text: Primula veris

text: P. veris S-morph plant from Estonia


characteristic: External Id

text: UNIVERSITY OF ZURICH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Seeds from France grown at the Botanical Garden of the University of Zurich.

text: S-morph (thrum)

text: Switzerland

text: glasshouse

text: Primula veris

characteristic: organism

text: cowslip

characteristic: organism common name

text: adult

characteristic: plant developmental stage

text: soil

characteristic: plant growth medium

text: leaf

characteristic: plant structure

text: diploid

characteristic: ploidy

text: Primula veris

text: P. veris S-morph plant from France


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF ZURICH

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: collection date

text: Seeds from Germany grown at the Botanical Garden of the University of Zurich.

text: S-morph (thrum)

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: glasshouse

text: Primula veris

text: cowslip

text: adult

text: soil

text: leaf

text: diploid

text: Primula veris

text: P. veris S-morph plant from Germany

characteristic: title


characteristic: External Id

text: UNIVERSITY OF ZURICH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Seeds from Greece grown at the Botanical Garden of the University of Zurich.

characteristic: description

characteristic: estimated size

text: S-morph (thrum)

characteristic: floral morph

text: Switzerland

text: glasshouse

characteristic: growth facility

characteristic: isolation and growth condition

text: Primula veris

text: cowslip

text: adult

text: soil

text: leaf

text: diploid

text: Primula veris

text: P. veris S-morph plant from Greece


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF ZURICH

characteristic: INSDC center name

text: public

text: Seeds from Italy grown at the Botanical Garden of the University of Zurich.

text: S-morph (thrum)

text: Switzerland

text: glasshouse

text: Primula veris

characteristic: organism

text: cowslip

characteristic: organism common name

text: adult

characteristic: plant developmental stage

text: soil

characteristic: plant growth medium

text: leaf

characteristic: plant structure

text: diploid

characteristic: ploidy

text: Primula veris

text: P. veris S-morph plant from Italy.


characteristic: External Id

text: UNIVERSITY OF ZURICH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: Seeds from Norway grown at the Botanical Garden of the University of Zurich.

text: S-morph (thrum)

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: glasshouse

text: Primula veris

text: cowslip

text: adult

text: soil

text: leaf

text: diploid

text: Primula veris

text: P. veris S-morph plant from Norway

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF ZURICH

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Seeds from Poland grown at the Botanical Garden of the University of Zurich.

characteristic: description

characteristic: estimated size

text: S-morph (thrum)

characteristic: floral morph

text: Switzerland

text: glasshouse

characteristic: growth facility

characteristic: isolation and growth condition

text: Primula veris

text: cowslip

text: adult

text: soil

text: leaf

text: diploid

text: Primula veris

text: P. veris S-morph plant from Poland


characteristic: External Id

text: UNIVERSITY OF ZURICH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Seeds from Romania grown at the Botanical Garden of the University of Zurich.

text: S-morph (thrum)

text: Switzerland

text: glasshouse

text: Primula veris

characteristic: organism

text: cowslip

characteristic: organism common name

text: adult

characteristic: plant developmental stage

text: soil

characteristic: plant growth medium

text: leaf

characteristic: plant structure

text: diploid

characteristic: ploidy

text: Primula veris

text: P. veris S-morph plant from Romania


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NORWEGIAN UNIVERSITY OF LIFE SCIENCES

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: collection date

text: human gut-associated

characteristic: environment (biome)

text: enrichment

characteristic: environment (feature)

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: metagenome

characteristic: project name

text: metagenome

text: Illumina HiSeq 4000

characteristic: sequencing method

text: Additional cultures

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: NORWEGIAN UNIVERSITY OF LIFE SCIENCES

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: human gut-associated

text: enrichment

text: USA

text: human-gut

text: metagenome

characteristic: organism

text: metagenome

text: HiSeq X Ten

text: Additional cultures


LF82 virome

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INRA

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: LF82 virome

text: Misson Pauline, Cornuault Jeffrey K and De Paepe Marianne

characteristic: collected by

text: Metagenomic raw reads from the polylysogenised Escherichia coli LF82 supernatant containing temperate phages spontaneously released from the bacterial strain

characteristic: description

text: viral metagenome

text: viral metagenome

text: Virome from E.coli LF82 supernatant


text: UNIVERSITY OF ZURICH

text: public

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: glasshouse

characteristic: growth facility

characteristic: isolation and growth condition

text: Primula veris

text: cowslip

characteristic: organism common name

text: adult

characteristic: plant developmental stage

text: soil

characteristic: plant growth medium

text: floral buds

characteristic: plant structure

text: diploid

characteristic: ploidy

text: Primula veris

text: P. veris RNA-seq - Floral buds


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UNIVERSITY OF ZURICH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Switzerland

text: glasshouse

text: Primula veris

characteristic: organism

text: cowslip

text: adult

text: soil

text: full- blooming flower

text: diploid

text: Primula veris

text: P. veris RNA-seq - Flower

characteristic: title


characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF ZURICH

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: glasshouse

text: Primula veris

text: cowslip

text: adult

text: soil

text: Inflorescence stem

text: diploid

text: Primula veris

text: P. veris RNA-seq - Inflorescence stem


HUN-INFSTEM

text: UNIVERSITY OF ZURICH

text: public

text: HUN-INFSTEM

text: Switzerland

text: glasshouse

characteristic: growth facility

characteristic: isolation and growth condition

text: Primula veris

text: cowslip

characteristic: organism common name

text: adult

characteristic: plant developmental stage

text: soil

characteristic: plant growth medium

text: Inflorescence stem

characteristic: plant structure

text: diploid

characteristic: ploidy

text: Primula veris

text: P. veris RNA-seq - Inflorescence stem


RUS-INFSTEM

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UNIVERSITY OF ZURICH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: RUS-INFSTEM

characteristic: Submitter Id

text: Switzerland

text: glasshouse

text: Primula veris

text: cowslip

text: adult

text: soil

text: Inflorescence stem

text: diploid

text: Primula veris

text: P. veris RNA-seq - Inflorescence stem


characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF ZURICH

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: glasshouse

text: Primula veris

characteristic: organism

text: cowslip

text: adult

text: soil

text: leaf

text: diploid

text: Primula veris

text: P. veris RNA-seq - Leaf

characteristic: title


HUN-LEAF

text: UNIVERSITY OF ZURICH

text: public

text: HUN-LEAF

text: Switzerland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: glasshouse

characteristic: growth facility

characteristic: isolation and growth condition

text: Primula veris

text: cowslip

characteristic: organism common name

text: adult

characteristic: plant developmental stage

text: soil

characteristic: plant growth medium

text: leaf

text: diploid

text: Primula veris

text: P. veris RNA-seq - Leaf


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UNIVERSITY OF ZURICH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Switzerland

text: glasshouse

text: Primula veris

text: cowslip

text: adult

text: soil

text: root

characteristic: plant structure

text: diploid

characteristic: ploidy

text: Primula veris

text: P. veris RNA-seq - Root


ARM-ROOT

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF ZURICH

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ARM-ROOT

characteristic: Submitter Id

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: glasshouse

text: Primula veris

text: cowslip

text: adult

text: soil

text: root

text: diploid

text: Primula veris

text: P. veris RNA-seq - Root


BEL-ROOT

text: UNIVERSITY OF ZURICH

text: public

text: BEL-ROOT

text: Switzerland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: glasshouse

characteristic: growth facility

characteristic: isolation and growth condition

text: Primula veris

characteristic: organism

text: cowslip

characteristic: organism common name

text: adult

text: soil

text: root

text: diploid

text: Primula veris

text: P. veris RNA-seq - Root

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UNIVERSITY OF ZURICH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Switzerland

text: glasshouse

text: Primula veris

text: cowslip

text: adult

characteristic: plant developmental stage

text: soil

characteristic: plant growth medium

text: Early-germinating seeds

text: diploid

text: Primula veris

text: P. veris RNA-seq - Seeds


characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF ZURICH

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Switzerland

text: glasshouse

text: Primula veris

text: cowslip

text: adult

text: soil

text: Seedlings

characteristic: plant structure

text: diploid

characteristic: ploidy

text: Primula veris

text: P. veris RNA-seq - Seedlings


text: public

tag: Namespace:Karolinska Institutet Department of Cell & Molecular Biology

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: human

characteristic: common name

text: Protocols: HEK293FT cells were dissociated using TrypLE. Cells were FACS sorted and lysed into 5 ul of Phusion HF (1/500 diluted) buffer supplemented with 0.025 pg of 3'-molecular spike-in and lysate was used for library preparation without nucleic acid extraction. Libraries were prepared in 3 variations of the SCRB-seq protocol. (1) standard protocol as described by Soumillon et al., 2014 (2) as (1) but omitting the ExonucleaseI step prior to cDNA amplification and (3) PCR master-mix was added to each well individually, omitting both the pooling and Exonuclease I steps.

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

text: SCRB-seq


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: Karolinska Institutet Department of Cell & Molecular Biology

text: public

text: ArrayExpress

text: human

text: Protocols: HEK293FT cells were dissociated using TrypLE. Cells were FACS sorted and lysed into 3 ul of Smart-seq3 lysis buffer supplemented with 0.025 pg of 5'-molecular spike-in and lysate was used for library preparation without nucleic acid extraction. Smart-seq3 library preparations were performed as published: https://www.protocols.io/view/smart-seq3-protocol-bcq4ivywLibrary and with following modifications: The cDNA was cleaned up after reverse transcription. For the pre-amplification PCR different amounts of fwd primer were chosen (0.1, 0.5, 1.0 uM) in presence or absence of template switching oligo.

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

characteristic: title


E-MTAB-10372:10xGenomics v2

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10372:10xGenomics v2

text: ArrayExpress

text: human

text: Protocols: HEK293FT cells were dissociated using TrypLE. Cell suspension was supplemented with 3'-molecular spikes and captured in a Chromium controller using the v2 kit as specified by the manufacturer. 10x Genomics libraries were prepared according to the v2 protocol with the following changes: 10 ul of GEM-RT mix was used and the remainder of the GEM-RT mix was discarded to reduce cell numbers. The fragmentation step was extended to 10 minutes. The double-sided bead-cleanup after the fragmentation was changed to a ratio of 0.6:1 and 1:1 respectively. Similarly, the post-ligation cleanup (step 3.4) was increased to 1:1 ratio instead of 0.8:1. The double-sided post-indexing PCR cleanup was performed at 0.6:1 and 1:1 ratios respectively.

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: 10xGenomics v2


text: hermaphrodite

characteristic: ArrayExpress-Sex

text: Oscheius sp. DF5120

characteristic: ArrayExpress-Species

characteristic: ArrayExpress-StrainOrLine

characteristic: ENA-LAST-UPDATE

text: SC

characteristic: INSDC center name

text: public

text: Oscheius sp. DF5120

text: Oscheius sp. DF5120

text: Oscheius sp. DF5120

characteristic: strain


E-MTAB-10404:biallelic mutation_1

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10404:biallelic mutation_1

tag: Namespace:Malopolska Centrum of Biotechnology, Jagiellonian University

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: endothelial cell

characteristic: cell type

text: human

text: Protocols: Cells were detached with accutase, washed with PBS and lysed with Fenozol. RNA was isolated using Chomczynski method. Ion AmpliSeq Transcriptome Human Gene Expression Panel was used for generation of the libraries.

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: biallelic CRISPR Cas9 mutation of HNF1A

characteristic: genetic modification

text: Homo sapiens

text: Homo sapiens

text: vasculature

characteristic: organism part

text: MODY

characteristic: phenotype

text: induced pluripotent stem cell

characteristic: progenitor cell type

text: Homo sapiens

text: male

characteristic: sex

text: biallelic mutation_1


E-MTAB-10404:biallelic mutation_2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: Malopolska Centrum of Biotechnology, Jagiellonian University

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10404:biallelic mutation_2

text: ArrayExpress

text: endothelial cell

text: human

characteristic: common name

characteristic: description

text: adult

text: normal

text: biallelic CRISPR Cas9 mutation of HNF1A

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: vasculature

text: MODY

text: induced pluripotent stem cell

text: Homo sapiens

text: male

text: biallelic mutation_2

characteristic: title


E-MTAB-10404:biallelic mutation_3

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10404:biallelic mutation_3

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: endothelial cell

characteristic: cell type

text: human

text: adult

text: normal

text: biallelic CRISPR Cas9 mutation of HNF1A

text: Homo sapiens

text: Homo sapiens

text: vasculature

text: MODY

text: induced pluripotent stem cell

text: Homo sapiens

text: male

text: biallelic mutation_3


E-MTAB-10404:biallelic mutation_4

text: public

text: E-MTAB-10404:biallelic mutation_4

text: ArrayExpress

text: endothelial cell

text: human

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: biallelic CRISPR Cas9 mutation of HNF1A

characteristic: genetic modification

text: Homo sapiens

text: Homo sapiens

text: vasculature

characteristic: organism part

text: MODY

characteristic: phenotype

text: induced pluripotent stem cell

characteristic: progenitor cell type

text: Homo sapiens

text: male

characteristic: sex

text: biallelic mutation_4


E-MTAB-10404:control 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10404:control 1

text: ArrayExpress

text: endothelial cell

text: human

characteristic: common name

characteristic: description

text: adult

text: normal

text: Homo sapiens

text: Homo sapiens

text: vasculature

text: wild type

text: induced pluripotent stem cell

text: Homo sapiens

text: male

text: control 1


E-MTAB-10404:control 2

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10404:control 2

characteristic: Submitter Id

text: ArrayExpress

text: endothelial cell

text: human

text: adult

text: normal

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: vasculature

text: wild type

text: induced pluripotent stem cell

text: Homo sapiens

text: male

text: control 2

characteristic: title


E-MTAB-10404:control 3

text: public

text: E-MTAB-10404:control 3

text: ArrayExpress

characteristic: broker name

text: endothelial cell

characteristic: cell type

text: human

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: Homo sapiens

text: Homo sapiens

text: vasculature

characteristic: organism part

text: wild type

characteristic: phenotype

text: induced pluripotent stem cell

text: Homo sapiens

text: male

text: control 3


E-MTAB-10404:control 4

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

characteristic: INSDC first public

text: public

text: E-MTAB-10404:control 4

text: ArrayExpress

text: endothelial cell

text: human

text: adult

text: normal

text: Homo sapiens

text: Homo sapiens

text: vasculature

text: wild type

text: induced pluripotent stem cell

characteristic: progenitor cell type

text: Homo sapiens

text: male

characteristic: sex

text: control 4


E-MTAB-10404:monoallelic mutation_1

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-10404:monoallelic mutation_1

text: ArrayExpress

text: endothelial cell

text: human

characteristic: common name

characteristic: description

text: adult

text: normal

text: monoallelic CRISPR Cas9 mutation of HNF1A

characteristic: genetic modification

text: Homo sapiens

text: Homo sapiens

text: vasculature

text: MODY

text: induced pluripotent stem cell

text: Homo sapiens

text: male

text: monoallelic mutation_1


E-MTAB-10404:monoallelic mutation_2

text: public

characteristic: SRA accession

text: E-MTAB-10404:monoallelic mutation_2

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: endothelial cell

characteristic: cell type

text: human

text: adult

characteristic: developmental stage

text: normal

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: vasculature

text: MODY

text: induced pluripotent stem cell

text: Homo sapiens

text: male

text: monoallelic mutation_2

characteristic: title


E-MTAB-10404:monoallelic mutation_3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

characteristic: INSDC first public

text: public

text: E-MTAB-10404:monoallelic mutation_3

text: ArrayExpress

text: endothelial cell

text: human

text: adult

text: normal

characteristic: disease

text: Homo sapiens

text: Homo sapiens

text: vasculature

characteristic: organism part

text: MODY

characteristic: phenotype

text: induced pluripotent stem cell

text: Homo sapiens

text: male

text: monoallelic mutation_3


E-MTAB-10404:monoallelic mutation_4

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-10404:monoallelic mutation_4

text: ArrayExpress

text: endothelial cell

text: human

characteristic: common name

text: adult

text: normal

text: Homo sapiens

text: Homo sapiens

text: vasculature

text: MODY

text: induced pluripotent stem cell

characteristic: progenitor cell type

text: Homo sapiens

text: male

characteristic: sex

text: monoallelic mutation_4


text: public

characteristic: SRA accession

tag: Namespace:Universidad del Pais Vasco/Euskal Herriko Unibertsitatea

characteristic: Submitter Id

characteristic: collection date

text: mouse gut

characteristic: environment (biome)

text: feaces

characteristic: environment (feature)

text: colon content

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: -2.88265 43° 18′ 28″

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: mouse gut metagenome

text: MCJ deficient mice gut metagenome

characteristic: project name

text: mouse gut metagenome

text: pyrosequencing

characteristic: sequencing method

text: MCJ gut metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Universidad del Pais Vasco/Euskal Herriko Unibertsitatea

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: mouse gut

text: feaces

text: colon content

text: Spain

text: -2.88265 43° 18′ 28″

text: host-associated

text: metagenome

text: mouse gut metagenome

characteristic: organism

text: MCJ deficient mice gut metagenome

text: mouse gut metagenome

text: pyrosequencing

text: MCJ gut metagenome

characteristic: title


text: CTB/NICD

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: NDM Oxford

characteristic: broker name

text: Mycobacterium

characteristic: genus

characteristic: isolate

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: BC01301735. CTB/NICD. BC01301735

type: AMR curated data - CABBAGE

value: kanamycin

value: EUCAST

value: broth dilution

value: mg/L

value: Sensititre

value: susceptible

value: Mycobacterium tuberculosis

value: isoniazid

value: resistant

value: levofloxacin

value: amikacin

value: ethambutol

value: ethionamide

value: intermediate

value: rifampin

value: moxifloxacin

value: bedaquiline

value: cefpimizole

value: linezolid

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: BC01311461. CTB/NICD. BC01311461

value: EUCAST

value: broth dilution

value: mg/L

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00099906. CTB/NICD. YA00099906

value: Sensititre

value: susceptible

value: Mycobacterium tuberculosis

value: isoniazid

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: BG00791366. CTB/NICD. BG00791366

value: amikacin

value: ethionamide

value: resistant

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: EF00485556. CTB/NICD. EF00485556

value: rifampin

value: moxifloxacin

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: JE01615354. CTB/NICD. JE01615354

value: bedaquiline

value: linezolid

value: rifabutin

value: cefpimizole

value: intermediate


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: JE01615357. CTB/NICD. JE01615357

value: EUCAST

value: broth dilution

value: mg/L

value: Sensititre

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: JE01615360. CTB/NICD. JE01615360

value: amikacin

value: Mycobacterium tuberculosis

value: isoniazid

value: susceptible

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: JE01615362. CTB/NICD. JE01615362

value: resistant

value: ethambutol

value: ethionamide

value: moxifloxacin

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: KD01504821. CTB/NICD. KD01504821

value: linezolid

value: cefpimizole

value: rifabutin

value: levofloxacin

value: bedaquiline


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: KD01519200. CTB/NICD. KD01519200

value: EUCAST

value: broth dilution

value: mg/L

value: Sensititre


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: KD01544988. CTB/NICD. KD01544988

value: Mycobacterium tuberculosis

value: isoniazid

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: KD01550573. CTB/NICD. KD01550573

value: resistant

value: susceptible

value: delamanid

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: KD01615866. CTB/NICD. KD01615866

value: ethionamide

value: rifampin

value: moxifloxacin

value: ethambutol

value: intermediate


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: KE00123097. CTB/NICD. KE00123097

value: rifabutin

value: bedaquiline

value: levofloxacin

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00099910. CTB/NICD. YA00099910

value: EUCAST

value: broth dilution

value: mg/L

value: Sensititre

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: KH00420169. CTB/NICD. KH00420169

value: resistant

value: Mycobacterium tuberculosis

value: isoniazid

value: susceptible


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: LA00615443. CTB/NICD. LA00615443

value: rifampin

value: kanamycin

value: amikacin

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: LA00631235. CTB/NICD. LA00631235

value: rifabutin

value: moxifloxacin

value: ethionamide

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: LA00633352. CTB/NICD. LA00633352

value: EUCAST

value: levofloxacin

value: linezolid

value: bedaquiline


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: LA00635819. CTB/NICD. LA00635819

value: broth dilution

value: mg/L

value: Sensititre

value: cefpimizole

value: intermediate


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00100048. CTB/NICD. YA00100048

value: rifampin

value: susceptible

value: Mycobacterium tuberculosis

value: resistant

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: LA00659381. CTB/NICD. LA00659381

value: amikacin

value: rifabutin

value: moxifloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00099981. CTB/NICD. YA00099981

value: kanamycin

value: EUCAST

value: delamanid

value: ethionamide

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: QF01916203. CTB/NICD. QF01916203

value: broth dilution

value: mg/L

value: levofloxacin

value: bedaquiline

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: UH01095418. CTB/NICD. UH01095418

value: Sensititre

value: susceptible

value: cefpimizole

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XD01518427. CTB/NICD. XD01518427

value: Mycobacterium tuberculosis

value: resistant

value: amikacin

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XD01555754. CTB/NICD. XD01555754

value: EUCAST

value: moxifloxacin

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XD01689585. CTB/NICD. XD01689585

value: delamanid

value: ethionamide

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XD01737782. CTB/NICD. XD01737782

value: broth dilution

value: mg/L

value: intermediate

value: ethambutol

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XD01776017. CTB/NICD. XD01776017

value: Sensititre

value: cefpimizole

value: susceptible

value: bedaquiline


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XD01814412. CTB/NICD. XD01814412

value: Mycobacterium tuberculosis

value: resistant

value: rifampin

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XG00327975. CTB/NICD. XG00327975

value: EUCAST

value: amikacin

value: isoniazid

value: moxifloxacin

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: XK00512686. CTB/NICD. XK00512686

value: broth dilution

value: mg/L

value: delamanid

value: ethionamide


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00004394. CTB/NICD. YA00004394

value: Sensititre

value: levofloxacin

value: rifabutin

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00004402. CTB/NICD. YA00004402

value: susceptible

value: Mycobacterium tuberculosis

value: bedaquiline

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00005293. CTB/NICD. YA00005293

value: EUCAST

value: resistant

value: rifampin

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00005300. CTB/NICD. YA00005300

value: moxifloxacin

value: isoniazid

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00006048. CTB/NICD. YA00006048

value: broth dilution

value: mg/L

value: amikacin

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00006704. CTB/NICD. YA00006704

value: Sensititre

value: rifabutin

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00006705. CTB/NICD. YA00006705

value: Mycobacterium tuberculosis

value: susceptible

value: ethionamide

value: intermediate

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00009954. CTB/NICD. YA00009954

value: EUCAST

value: rifampin

value: bedaquiline

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00014776. CTB/NICD. YA00014776

value: kanamycin

value: moxifloxacin

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00015299. CTB/NICD. YA00015299

value: broth dilution

value: mg/L

value: amikacin

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00020913. CTB/NICD. YA00020913


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00021572. CTB/NICD. YA00021572

value: Sensititre

value: resistant

value: levofloxacin

value: delamanid

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00022363. CTB/NICD. YA00022363

value: susceptible

value: Mycobacterium tuberculosis

value: ethionamide

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00027191. CTB/NICD. YA00027191

value: cefpimizole

value: EUCAST

value: bedaquiline

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00028174. CTB/NICD. YA00028174

value: broth dilution

value: moxifloxacin

value: linezolid

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00028176. CTB/NICD. YA00028176

value: mg/L

value: Sensititre

value: amikacin

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00028177. CTB/NICD. YA00028177

value: levofloxacin

value: delamanid

value: resistant

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00028560. CTB/NICD. YA00028560

value: Mycobacterium tuberculosis

value: susceptible

value: ethambutol

value: ethionamide

value: intermediate


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00029973. CTB/NICD. YA00029973

value: rifampin

value: EUCAST

value: broth dilution

value: bedaquiline

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00099984. CTB/NICD. YA00099984

value: mg/L

value: Sensititre

value: moxifloxacin

value: kanamycin

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00030716. CTB/NICD. YA00030716

value: isoniazid

value: levofloxacin

value: delamanid

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00030718. CTB/NICD. YA00030718

value: ethambutol

value: susceptible

value: Mycobacterium tuberculosis

value: resistant

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00031657. CTB/NICD. YA00031657

value: EUCAST

value: broth dilution

value: rifampin

value: ethionamide


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00032767. CTB/NICD. YA00032767

value: bedaquiline

value: mg/L

value: Sensititre

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00033028. CTB/NICD. YA00033028

value: linezolid

value: moxifloxacin

value: isoniazid

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00033032. CTB/NICD. YA00033032

value: levofloxacin

value: delamanid

value: ethambutol

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00033557. CTB/NICD. YA00033557

value: susceptible

value: Mycobacterium tuberculosis

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00034478. CTB/NICD. YA00034478

value: EUCAST

value: broth dilution

value: resistant

value: intermediate

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00034480. CTB/NICD. YA00034480

value: mg/L

value: Sensititre

value: ethionamide

value: bedaquiline

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00035200. CTB/NICD. YA00035200

value: kanamycin

value: levofloxacin

value: moxifloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00036410. CTB/NICD. YA00036410

value: delamanid

value: amikacin

value: isoniazid

value: linezolid

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00036417. CTB/NICD. YA00036417

value: EUCAST

value: broth dilution

value: susceptible

value: Mycobacterium tuberculosis

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00037922. CTB/NICD. YA00037922

value: mg/L

value: Sensititre

value: rifampin

value: resistant


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00038323. CTB/NICD. YA00038323

value: kanamycin

value: bedaquiline

value: cefpimizole

value: ethionamide


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00038327. CTB/NICD. YA00038327

value: amikacin

value: moxifloxacin

value: levofloxacin

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00038755. CTB/NICD. YA00038755

value: EUCAST

value: isoniazid

value: linezolid

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00038758. CTB/NICD. YA00038758

value: broth dilution

value: susceptible

value: Mycobacterium tuberculosis

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00038759. CTB/NICD. YA00038759

value: mg/L

value: Sensititre

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00038760. CTB/NICD. YA00038760

value: bedaquiline

value: cefpimizole

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00038761. CTB/NICD. YA00038761

value: moxifloxacin

value: resistant

value: amikacin

value: ethionamide

value: intermediate


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00039525. CTB/NICD. YA00039525

value: EUCAST

value: levofloxacin

value: linezolid

value: isoniazid

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00039526. CTB/NICD. YA00039526

value: broth dilution

value: susceptible

value: Mycobacterium tuberculosis

value: ethambutol

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00042002. CTB/NICD. YA00042002

value: mg/L

value: Sensititre

value: rifampin

value: bedaquiline

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00042240. CTB/NICD. YA00042240

value: kanamycin

value: ethionamide

value: amikacin

value: moxifloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: BC01318997. CTB/NICD. BC01318997

value: EUCAST

value: levofloxacin

value: resistant

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00042339. CTB/NICD. YA00042339

value: broth dilution

value: susceptible

value: isoniazid

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00042340. CTB/NICD. YA00042340

value: mg/L

value: Mycobacterium tuberculosis

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00042388. CTB/NICD. YA00042388

value: Sensititre

value: rifabutin

value: rifampin

value: bedaquiline


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00042619. CTB/NICD. YA00042619

value: kanamycin

value: amikacin

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00042627. CTB/NICD. YA00042627

value: EUCAST

value: ethionamide

value: moxifloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00043330. CTB/NICD. YA00043330

value: broth dilution

value: levofloxacin

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00043333. CTB/NICD. YA00043333

value: susceptible

value: isoniazid

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00043532. CTB/NICD. YA00043532


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00043533. CTB/NICD. YA00043533

value: mg/L

value: Mycobacterium tuberculosis

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00043537. CTB/NICD. YA00043537

value: Sensititre

value: rifabutin

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00043539. CTB/NICD. YA00043539

value: bedaquiline

value: amikacin

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00043541. CTB/NICD. YA00043541

value: EUCAST

value: cefpimizole

value: ethionamide


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00043543. CTB/NICD. YA00043543

value: broth dilution

value: moxifloxacin

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00043548. CTB/NICD. YA00043548

value: susceptible

value: linezolid

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: H37Rv_SA2434. CTB/NICD. H37Rv_SA2434


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00043550. CTB/NICD. YA00043550

value: mg/L

value: Mycobacterium tuberculosis

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00043551. CTB/NICD. YA00043551

value: Sensititre

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00043552. CTB/NICD. YA00043552

value: rifabutin

value: rifampin

value: bedaquiline


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00043554. CTB/NICD. YA00043554

value: EUCAST

value: amikacin

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00043556. CTB/NICD. YA00043556

value: broth dilution

value: cefpimizole

value: ethionamide


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00043557. CTB/NICD. YA00043557

value: susceptible

value: levofloxacin

value: moxifloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00099986. CTB/NICD. YA00099986

value: linezolid

value: mg/L

value: resistant


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00044178. CTB/NICD. YA00044178

value: Sensititre

value: Mycobacterium tuberculosis

value: delamanid

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00044183. CTB/NICD. YA00044183

value: rifabutin

value: bedaquiline

value: rifampin

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00044186. CTB/NICD. YA00044186

value: EUCAST

value: broth dilution

value: kanamycin

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00044192. CTB/NICD. YA00044192

value: levofloxacin

value: susceptible

value: cefpimizole

value: ethionamide


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00044196. CTB/NICD. YA00044196

value: mg/L

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00044207. CTB/NICD. YA00044207

value: moxifloxacin

value: Sensititre

value: Mycobacterium tuberculosis


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00044774. CTB/NICD. YA00044774

value: delamanid

value: rifabutin

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00044779. CTB/NICD. YA00044779

value: bedaquiline

value: ethambutol

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00044782. CTB/NICD. YA00044782

value: EUCAST

value: broth dilution

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00044784. CTB/NICD. YA00044784

value: amikacin

value: susceptible

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00045336. CTB/NICD. YA00045336

value: mg/L

value: ethionamide


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00045337. CTB/NICD. YA00045337

value: linezolid

value: cefpimizole

value: moxifloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00045341. CTB/NICD. YA00045341

value: Sensititre

value: Mycobacterium tuberculosis

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00045344. CTB/NICD. YA00045344

value: rifabutin

value: bedaquiline

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00045733. CTB/NICD. YA00045733

value: EUCAST

value: rifampin

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00045734. CTB/NICD. YA00045734

value: broth dilution

value: amikacin

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00046105. CTB/NICD. YA00046105

value: mg/L

value: susceptible


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00046231. CTB/NICD. YA00046231

value: levofloxacin

value: ethionamide


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00046652. CTB/NICD. YA00046652

value: linezolid

value: moxifloxacin

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00046653. CTB/NICD. YA00046653

value: Sensititre

value: Mycobacterium tuberculosis

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00046788. CTB/NICD. YA00046788

value: isoniazid

value: bedaquiline

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00046789. CTB/NICD. YA00046789

value: EUCAST

value: ethambutol

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00047753. CTB/NICD. YA00047753

value: broth dilution

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00048062. CTB/NICD. YA00048062

value: mg/L

value: susceptible


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00048066. CTB/NICD. YA00048066

value: ethionamide

value: kanamycin

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00048073. CTB/NICD. YA00048073

value: moxifloxacin

value: linezolid

value: intermediate

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00048272. CTB/NICD. YA00048272

value: Sensititre

value: Mycobacterium tuberculosis

value: delamanid

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00048273. CTB/NICD. YA00048273

value: EUCAST

value: ethambutol

value: rifabutin

value: bedaquiline


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00048280. CTB/NICD. YA00048280

value: broth dilution

value: mg/L

value: rifampin

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00048282. CTB/NICD. YA00048282

value: ethionamide

value: susceptible

value: levofloxacin

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00048283. CTB/NICD. YA00048283

value: linezolid

value: cefpimizole

value: moxifloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00048509. CTB/NICD. YA00048509

value: Sensititre

value: Mycobacterium tuberculosis

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00048511. CTB/NICD. YA00048511

value: EUCAST

value: isoniazid

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00048516. CTB/NICD. YA00048516

value: broth dilution

value: bedaquiline

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00050836. CTB/NICD. YA00050836

value: amikacin

value: mg/L

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00050837. CTB/NICD. YA00050837

value: susceptible

value: resistant

value: ethionamide

value: intermediate

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00050838. CTB/NICD. YA00050838

value: linezolid

value: Sensititre

value: cefpimizole

value: moxifloxacin

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00050840. CTB/NICD. YA00050840

value: EUCAST

value: Mycobacterium tuberculosis

value: delamanid

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00050842. CTB/NICD. YA00050842

value: broth dilution

value: bedaquiline

value: amikacin

value: rifabutin

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00050844. CTB/NICD. YA00050844

value: mg/L

value: susceptible

value: ethionamide

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00051698. CTB/NICD. YA00051698

value: linezolid

value: Sensititre

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00051700. CTB/NICD. YA00051700

value: moxifloxacin

value: kanamycin

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00052745. CTB/NICD. YA00052745

value: EUCAST

value: Mycobacterium tuberculosis

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00052750. CTB/NICD. YA00052750

value: broth dilution

value: bedaquiline

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00052755. CTB/NICD. YA00052755

value: amikacin

value: ethambutol

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00053282. CTB/NICD. YA00053282

value: mg/L

value: susceptible

value: ethionamide


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00053287. CTB/NICD. YA00053287

value: Sensititre

value: rifampin

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00053289. CTB/NICD. YA00053289

value: moxifloxacin

value: levofloxacin

value: kanamycin

value: resistant


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00053290. CTB/NICD. YA00053290

value: EUCAST

value: Mycobacterium tuberculosis

value: delamanid

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00053292. CTB/NICD. YA00053292

value: broth dilution

value: bedaquiline

value: isoniazid

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00053857. CTB/NICD. YA00053857

value: mg/L

value: susceptible

value: rifabutin

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00099987. CTB/NICD. YA00099987

value: Sensititre

value: linezolid

value: ethionamide

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00100000. CTB/NICD. YA00100000

value: levofloxacin

value: kanamycin

value: moxifloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00053863. CTB/NICD. YA00053863

value: EUCAST

value: Mycobacterium tuberculosis

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00053864. CTB/NICD. YA00053864

value: broth dilution

value: cefpimizole


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00053927. CTB/NICD. YA00053927

value: amikacin

value: bedaquiline

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00053931. CTB/NICD. YA00053931

value: mg/L

value: susceptible

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00053932. CTB/NICD. YA00053932

value: Sensititre

value: ethambutol

value: linezolid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00053935. CTB/NICD. YA00053935

value: ethionamide

value: rifampin

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00056555. CTB/NICD. YA00056555


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00100003. CTB/NICD. YA00100003

value: kanamycin

value: EUCAST

value: resistant

value: moxifloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00056559. CTB/NICD. YA00056559

value: broth dilution

value: Mycobacterium tuberculosis

value: delamanid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00056567. CTB/NICD. YA00056567

value: amikacin

value: cefpimizole

value: bedaquiline

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00056569. CTB/NICD. YA00056569

value: mg/L

value: Sensititre

value: susceptible

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00056571. CTB/NICD. YA00056571

value: ethionamide

value: rifampin

value: ethambutol


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00056574. CTB/NICD. YA00056574

value: EUCAST

value: levofloxacin

value: linezolid

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00056649. CTB/NICD. YA00056649

value: broth dilution

value: Mycobacterium tuberculosis

value: moxifloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00056650. CTB/NICD. YA00056650

value: resistant

value: delamanid

value: cefpimizole

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00056652. CTB/NICD. YA00056652

value: mg/L

value: Sensititre

value: bedaquiline

value: isoniazid


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00099951. CTB/NICD. YA00099951

value: rifabutin

value: susceptible

value: ethionamide

value: rifampin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00056654. CTB/NICD. YA00056654

value: EUCAST

value: ethambutol

value: linezolid

value: levofloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00056655. CTB/NICD. YA00056655

value: broth dilution

value: Mycobacterium tuberculosis

value: kanamycin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00056657. CTB/NICD. YA00056657

value: cefpimizole

value: moxifloxacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00058291. CTB/NICD. YA00058291

value: mg/L

value: amikacin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00058293. CTB/NICD. YA00058293

value: Sensititre

value: delamanid

value: bedaquiline


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00058302. CTB/NICD. YA00058302

value: susceptible

value: isoniazid

value: rifabutin


text: CTB/NICD

text: public

text: NDM Oxford

text: Mycobacterium

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: YA00058308. CTB/NICD. YA00058308

value: EUCAST

value: ethionamide

value: rifampin