characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SC

text: Health Services Laboratories

text: not provided

characteristic: collector name

text: United Kingdom

text: Scotland

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


status: PUBLIC

tag: attribute

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: SC

characteristic: broker name

text: Lighthouse Lab in Glasgow

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Samples prepared at Lighthouse Lab in Glasgow by Harper VanSteenhouse, Yumi Kasai, David Gray, Carol Clugston, Anna Dominiczak and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Scotland

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SC

text: Lighthouse Lab in Alderley Park

text: not provided

characteristic: collector name

text: Samples prepared at Lighthouse Lab in Alderley Park by Jacquelyn Wynn, Mairead Hyland, The Lighthouse Lab in Alderley Park and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: England

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: SC

characteristic: broker name

text: Rosalind Franklin Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Samples prepared at Rosalind Franklin Laboratory by Donald Fraser, Suki Lee, Rob Howes, The Rosalind Franklin Laboratory and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Human

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: SC

text: Health Services Laboratories

text: not provided

text: Samples prepared at Health Services Laboratories by Health Services Laboratories and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: England

text: Human

text: not provided

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SC

text: Lighthouse Lab in Glasgow

text: not provided

characteristic: collector name

text: United Kingdom

text: England

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: SC

characteristic: broker name

text: Health Services Laboratories

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Human

text: not provided

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: SC

text: Rosalind Franklin Laboratory

text: not provided

text: United Kingdom

text: Wales

text: Human

text: not provided

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SC

text: Lighthouse Lab in Milton Keynes

text: not provided

characteristic: collector name

text: Samples prepared at Lighthouse Lab in Milton Keynes by The Lighthouse Lab in Milton Keynes and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: England

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: SC

characteristic: broker name

text: Lighthouse Lab in Milton Keynes

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Scotland

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Human

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: SC

text: Integrated Covid Hub North East

text: not provided

text: Samples prepared at Integrated Covid Hub North East by Integrated Covid Hub North East and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

text: United Kingdom

text: England

text: Human

text: not provided

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SC

text: Lighthouse Lab in Glasgow

text: not provided

characteristic: collector name

text: United Kingdom

text: Wales

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: anonymized name

characteristic: description

text: TRUE

characteristic: elevation

text: Control

text: Negative

text: Sterile water blank

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: misc environment

characteristic: env package

text: sterile water

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: latitude

characteristic: longitude

text: metagenome

text: UCSDMI

text: FALSE

text: ITS8, 13,19, 20

characteristic: prep

text: control blank

characteristic: sample type

text: metagenome

text: GOLD study


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: TRUE

text: Control

text: Negative

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text: urban biome

text: research facility

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text: USA:CA:San Diego

characteristic: host subject id

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text: FALSE

text: ITS8, 13,19, 20

text: control blank

text: metagenome

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characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

characteristic: INSDC center name

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text: public

text: years

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characteristic: antibiotic

text: S

characteristic: center

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text: TRUE

characteristic: elevation

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: human-associated habitat

text: human-gut

text: feces

text: F

characteristic: gender

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text: USA:NY

text: not provided

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: human

text: not provided

text: adult

text: Homo sapiens

text: not provided

text: human gut metagenome

text: UCSDMI

text: FALSE

text: Mexico

text: prep 9-14

text: feces

text: human gut metagenome

text: female

text: GOLD study

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: Medisupport

characteristic: INSDC first public

text: public

characteristic: INSDC status

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text: SIB

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text: Bioanalytika AG, Luzern, Switzerland

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text: Tanguy ARAUD, Geraldine Jost, Katia Jaton, Nadia Liassine

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text: Switzerland

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text: hCoV-19/Switzerland/LU-DIA-011441597401/2022

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characteristic: GISAID Accession ID

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text: Bioanalytika AG, Luzern, Switzerland

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characteristic: GISAID Accession ID

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text: Bioanalytika AG, Luzern, Switzerland

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text: Tanguy ARAUD, Geraldine Jost, Katia Jaton, Nadia Liassine

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characteristic: geographic location (region and locality)

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text: hCoV-19/Switzerland/LU-DIA-011441597001/2022


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characteristic: GISAID Accession ID

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text: hCoV-19/Switzerland/LU-DIA-011441597901/2022

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text: hCoV-19/Switzerland/LU-DIA-011441598201/2022


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text: hCoV-19/Switzerland/LU-DIA-011441598501/2022


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characteristic: geographic location (region and locality)

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unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

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