text: UNIVERSITY OF GLASGOW

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: tissue

characteristic: description

text: Tanzania

text: Ngorongoro Conservation Area

text: diseased

text: Ovis aries

characteristic: host scientific name

text: DNA extract from animal carcass

text: Bacillus anthracis

text: Bacillus anthracis

text: Ancient A ERC000028


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GLASGOW

characteristic: INSDC center name

text: public

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF GLASGOW

characteristic: collection date

text: blood

text: Tanzania

characteristic: geographic location (country and/or sea)

text: Ngorongoro Conservation Area

characteristic: geographic location (region and locality)

text: diseased

characteristic: host health state

text: Ovis aries

characteristic: isolate

text: DNA extract from animal carcass

characteristic: isolation source

text: Bacillus anthracis

characteristic: organism

text: Bacillus anthracis

text: Ancient A ERC000028

characteristic: strain checklist_accession

text: Bacillus anthracis targeted capture sequencing from animal carcass in northern Tanzania

characteristic: title


text: UNIVERSITY OF GLASGOW

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: insect

characteristic: description

text: Tanzania

text: Ngorongoro Conservation Area

text: diseased

text: Ovis aries

text: DNA extract from animal carcass

text: Bacillus anthracis

text: Bacillus anthracis

text: Ancient A ERC000028


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GLASGOW

text: public

text: swab

text: Tanzania

text: Ngorongoro Conservation Area

text: diseased

text: Ovis aries

characteristic: host scientific name

text: DNA extract from animal carcass

text: Bacillus anthracis

text: Bacillus anthracis

text: Ancient A ERC000028


text: UNIVERSITY OF GLASGOW

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: collection date

text: insect

text: Tanzania

characteristic: geographic location (country and/or sea)

text: Ngorongoro Conservation Area

characteristic: geographic location (region and locality)

text: diseased

text: Bos indicus

text: DNA extract from animal carcass

text: Bacillus anthracis

text: Bacillus anthracis

text: Ancient A ERC000028


text: UNIVERSITY OF GLASGOW

text: public

text: tissue

text: Tanzania

text: Ngorongoro Conservation Area

text: diseased

characteristic: host health state

characteristic: isolate

text: DNA extract from animal carcass

characteristic: isolation source

text: Bacillus anthracis

characteristic: organism

text: Bacillus anthracis

text: Ancient A ERC000028

characteristic: strain checklist_accession


text: UNIVERSITY OF GLASGOW

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: swab

text: Tanzania

text: Ngorongoro Conservation Area

text: diseased

text: Bos indicus

text: DNA extract from animal carcass

text: Bacillus anthracis

text: Bacillus anthracis

text: Ancient A ERC000028

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GLASGOW

text: public

text: tissue

characteristic: description

text: Tanzania

text: Ngorongoro Conservation Area

text: diseased

text: Bos indicus

text: DNA extract from animal carcass

text: Bacillus anthracis

text: Bacillus anthracis

text: Ancient A ERC000028


text: UNIVERSITY OF GLASGOW

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: collection date

text: blood

text: Tanzania

characteristic: geographic location (country and/or sea)

text: Ngorongoro Conservation Area

text: diseased

text: Bos indicus

characteristic: host scientific name

text: DNA extract from animal carcass

text: Bacillus anthracis

text: Bacillus anthracis

text: Ancient A ERC000028


text: UNIVERSITY OF GLASGOW

text: public

text: tissue

text: Tanzania

text: Ngorongoro Conservation Area

characteristic: geographic location (region and locality)

text: diseased

characteristic: host health state

text: Equus quagga

characteristic: isolate

text: DNA extract from animal carcass

characteristic: isolation source

text: Bacillus anthracis

characteristic: organism

text: Bacillus anthracis

text: Ancient A ERC000028


text: UNIVERSITY OF GLASGOW

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: tissue

text: Tanzania

text: Ngorongoro Conservation Area

text: diseased

text: Capra hircus

text: DNA extract from animal carcass

text: Bacillus anthracis

text: Bacillus anthracis

text: Ancient A ERC000028

characteristic: strain checklist_accession


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GLASGOW

text: public

text: blood

text: Tanzania

text: Ngorongoro Conservation Area

text: diseased

text: Capra hircus

text: DNA extract from animal carcass

text: Bacillus anthracis

text: Bacillus anthracis

text: Ancient A ERC000028

characteristic: title


text: UNIVERSITY OF GLASGOW

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: collection date

text: blood

characteristic: description

text: Tanzania

characteristic: geographic location (country and/or sea)

text: Ngorongoro Conservation Area

text: diseased

text: Equus asinus

text: DNA extract from animal carcass

text: Bacillus anthracis

text: Bacillus anthracis

text: Ancient A ERC000028


text: UNIVERSITY OF GLASGOW

text: public

text: swab

text: Tanzania

text: Ngorongoro Conservation Area

characteristic: geographic location (region and locality)

text: diseased

characteristic: host health state

text: Connochaetes taurinus

characteristic: host scientific name

characteristic: isolate

text: DNA extract from animal carcass

characteristic: isolation source

text: Bacillus anthracis

text: Bacillus anthracis

text: Ancient A ERC000028


text: UNIVERSITY OF GLASGOW

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: tissue

text: Tanzania

text: Ngorongoro Conservation Area

text: diseased

text: Connochaetes taurinus

text: DNA extract from animal carcass

text: Bacillus anthracis

characteristic: organism

text: Bacillus anthracis

text: Ancient A ERC000028


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GLASGOW

text: public

text: blood

text: Tanzania

text: Ngorongoro Conservation Area

text: diseased

text: Equus quagga

text: DNA extract from animal carcass

text: Bacillus anthracis

text: Bacillus anthracis

text: Ancient A ERC000028

characteristic: strain checklist_accession


text: UNIVERSITY OF GLASGOW

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: collection date

text: swab

characteristic: description

text: Tanzania

text: Ngorongoro Conservation Area

text: diseased

text: Equus quagga

text: DNA extract from animal carcass

text: Bacillus anthracis

text: Bacillus anthracis

text: Ancient A ERC000028

characteristic: title


text: UNIVERSITY OF GLASGOW

text: public

text: tissue

text: Tanzania

characteristic: geographic location (country and/or sea)

text: Ngorongoro Conservation Area

characteristic: geographic location (region and locality)

text: diseased

characteristic: host health state

text: Ovis aries

characteristic: host scientific name

characteristic: isolate

text: DNA extract from animal carcass

text: Bacillus anthracis

text: Bacillus anthracis

text: Ancient A ERC000028


text: UNIVERSITY OF GLASGOW

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: blood

text: Tanzania

text: Ngorongoro Conservation Area

text: diseased

text: Ovis aries

text: DNA extract from animal carcass

characteristic: isolation source

text: Bacillus anthracis

text: Bacillus anthracis

text: Ancient A ERC000028


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GLASGOW

text: public

text: swab

text: Tanzania

text: Ngorongoro Conservation Area

text: diseased

text: Capra hircus

text: DNA extract from animal carcass

text: Bacillus anthracis

characteristic: organism

text: Bacillus anthracis

text: Ancient A ERC000028


text: PTE Medical Microbiology

characteristic: INSDC center name

text: public

characteristic: SRA accession

tag: Namespace:PTE Medical Microbiology

text: United Arab Emirates

characteristic: country

text: No

characteristic: host associated

text: Escherichia coli

text: Escherichia coli


text: PTE Medical Microbiology

text: public

text: United Arab Emirates

text: Salmonella enterica

text: Salmonella enterica

characteristic: title


text: public

tag: Namespace:Institute of Biochemistry and Biophysics Polish Academy of Sciences

text: Cin-S replicate 1

characteristic: description

text: Saccharomyces cerevisiae BY4741

text: Saccharomyces cerevisiae BY4741


text: Institute of Biochemistry and Biophysics Polish Academy of Sciences

text: public

text: Cin-S replicate 2

text: Saccharomyces cerevisiae BY4741

text: Saccharomyces cerevisiae BY4741


text: public

text: Cin-S replicate 3

text: Saccharomyces cerevisiae BY4741

text: Saccharomyces cerevisiae BY4741


text: public

text: Con-B replicate 1

text: Saccharomyces cerevisiae BY4741

text: Saccharomyces cerevisiae BY4741


text: public

text: Con-B replicate 2

text: Saccharomyces cerevisiae BY4741

text: Saccharomyces cerevisiae BY4741


text: public

text: Con-B replicate 3

text: Saccharomyces cerevisiae BY4741

text: Saccharomyces cerevisiae BY4741


text: public

text: RiboMinus replicate 1

text: Saccharomyces cerevisiae BY4741

text: Saccharomyces cerevisiae BY4741


text: public

text: RiboMinus replicate 2

text: Saccharomyces cerevisiae BY4741

text: Saccharomyces cerevisiae BY4741


text: public

text: RiboMinus replicate 3

text: Saccharomyces cerevisiae BY4741

text: Saccharomyces cerevisiae BY4741


text: public

tag: Namespace:VTT Technical Research Centre of Finland Ltd

characteristic: collection date

text: mica schist

text: deep subsurface

characteristic: environment (biome)

text: crystalline bedrock

characteristic: environment (feature)

text: microcosm ERC000025

text: Finland

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Outokumpu

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: miscellaneous natural or artificial environment

characteristic: miscellaneous environmental package

text: uncultured bacterium

characteristic: project name

text: uncultured bacterium

text: amplicon

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VTT Technical Research Centre of Finland Ltd

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: mica schist

text: deep subsurface

text: crystalline bedrock

text: microcosm ERC000025

text: Finland

text: Outokumpu

text: metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: amplicon


text: public

characteristic: collection date

text: water

characteristic: description

text: deep subsurface

characteristic: environment (biome)

text: crystalline bedrock

characteristic: environment (feature)

text: microcosm ERC000025

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Outokumpu

text: metagenome

text: uncultured bacterium

text: uncultured bacterium

text: amplicon

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: glass

text: deep subsurface

text: crystalline bedrock

text: microcosm ERC000025

text: Finland

text: Outokumpu

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: uncultured bacterium

characteristic: project name

text: uncultured bacterium

text: amplicon

characteristic: sequencing method


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: mica schist

characteristic: description

text: deep subsurface

text: crystalline bedrock

text: microcosm ERC000025

text: Finland

text: Outokumpu

text: metagenome

text: uncultured fungus

characteristic: organism

text: uncultured fungus

text: amplicon


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: water

text: deep subsurface

characteristic: environment (biome)

text: crystalline bedrock

characteristic: environment (feature)

text: microcosm ERC000025

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Outokumpu

text: metagenome

text: uncultured fungus

text: uncultured fungus

text: amplicon

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: glass

text: deep subsurface

text: crystalline bedrock

text: microcosm ERC000025

text: Finland

text: Outokumpu

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: uncultured fungus

characteristic: project name

text: uncultured fungus

text: amplicon

characteristic: sequencing method


text: https://ncim.nci.nih.gov/ncimbrowser/ConceptReport.jsp?dictionary=NCI Metathesaurus&code=C0549184

text: month

text: adult

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Center for Epigenomics Research, HKUST

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Center for Epigenomics Research, HKUST

characteristic: Submitter Id

characteristic: biological replicate

text: Leung lab, Hong Kong University of Science and Technology

characteristic: biomaterial provider

text: Primary Tissue

characteristic: biomaterial type

text: Cerebral cortex

text: The animal was deeply anesthetized with Avertin (0.03 ml/g); the depth of anesthesia was assessed by the absence of deep tendon reflexes following a strong foot pinch. Once adequate anesthesia was achieved, the chest cavity was opened. The right atrium was clipped to allow exsanguination and the mouse was perfused through the left ventricle with PBS. Whole brain was obtained and cut into the left and right hemispheres. Each half was then dissected separately by eye. Hindbrain and cerebellum was first separated from the hemispheres, then cerebellum was obtained. The olfactory bulb was removed, along with brain stem regions until hippocampus was clearly visible. Hippocampus was obtained, and the remaining tissue was labelled as cerebral cortex. All collected tissue was snap frozen and stored at -80°C until nuclei extraction. For nuclei extraction, frozen tissue was added to 1 mL cold 1X homogenization buffer (320 mM sucrose, 0.1 mM EDTA, 0.1% NP40, 5 mM CaCl2, 3 mM Mg(Ac)2, 10 mM Tris pH 7.8, 16.7 μM PMSF, 167 μM β-mercaptoethanol, 1U/mL RNAse inhibitor in nuclease-free water) (modified from Corces et al., 2017). Tissue was dounced 10 strokes using loose pestle and 5 strokes using tight pestle (WHEATON® Dounce Tissue Grinder, 1 mL). Homogenate was filtered through a 40 μm cell strainer and spun down at 4°C, 1000g for 10 mins. Pellet was resuspended in 3mL of low sucrose buffer (0.32M sucrose, 10mM HEPES pH 8, 5mM CaCl2, 3mM Mg(Ac)2, 0.1mM EDTA, 1mM DTT, 0.2U/μL RNAse inhibitor in nuclease-free water) (modified from Matson et al., 2018). 12.5 mL of sucrose density buffer (1M sucrose, 10mM HEPES pH 8, 3mM Mg(Ac)2, 1mM DTT in nuclease-free water) was added slowly underneath the low sucrose buffer homogenate. The sucrose gradient was then centrifuged in a swing-bucket rotor at 4°C, 3200g for 20 min. The supernatant was decanted and pelleted purified nuclei was resuspended in buffer for sorting (0.2U/μL RNAse inhibitor, 1% BSA in PBS). Nuclei was stained with Hoechst at 2μg/uL.

characteristic: collection method

text: house mouse

characteristic: common name

text: Cortex of mouse 88F

characteristic: description

characteristic: donor age

characteristic: donor id

text: Female

characteristic: donor sex

characteristic: mouse id

text: The most inclusive ontology term was used, but not all regions in the ontology are present in the tissue. Under telencephalon (ontology hierarchy), this sample is best represented by cerebral grey matter, cerebral hemisphere and cerebral white matter.

text: Mus musculus

characteristic: organism

text: Mus musculus

characteristic: strain

text: Telencephalon

characteristic: tissue depot

text: Telencephalon

characteristic: tissue type


text: month

text: adult

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Center for Epigenomics Research, HKUST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Primary Tissue

text: Cerebral cortex

text: house mouse

text: Cortex of mouse 70F

text: Female

text: Mus musculus

text: Mus musculus

text: Telencephalon

text: Telencephalon

characteristic: title


text: month

text: adult

text: Center for Epigenomics Research, HKUST

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

characteristic: biomaterial provider

text: Primary Tissue

characteristic: biomaterial type

text: Cerebral cortex

characteristic: collection method

text: house mouse

characteristic: common name

text: Cortex of mouse 93M

characteristic: description

characteristic: donor age

text: Male

text: Mus musculus

text: Mus musculus

text: Telencephalon

text: Telencephalon


text: month

text: adult

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Center for Epigenomics Research, HKUST

text: public

text: Primary Tissue

text: Hippocampus

text: house mouse

text: Hippocampus of mouse 88F

characteristic: donor id

text: Female

characteristic: donor sex

characteristic: mouse id

text: The most inclusive ontology term was used, but not all regions in the ontology are present in the tissue. Under hippocampal formation (ontology hierarchy), this sample is best represented by dentate gyrus, hippocampus region and hippocampus layer hippocampus.

text: Mus musculus

characteristic: organism

text: Mus musculus

characteristic: strain

text: Hippocampal formation

characteristic: tissue depot

text: Hippocampal formation

characteristic: tissue type


text: month

text: adult

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Center for Epigenomics Research, HKUST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Primary Tissue

text: Hippocampus

text: house mouse

text: Hippocampus of mouse 70F

text: Female

text: Mus musculus

text: Mus musculus

text: Hippocampal formation

text: Hippocampal formation

characteristic: title


text: month

text: adult

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Center for Epigenomics Research, HKUST

text: public

characteristic: biological replicate

characteristic: biomaterial provider

text: Primary Tissue

characteristic: biomaterial type

text: Hippocampus

characteristic: collection method

text: house mouse

characteristic: common name

text: Hippocampus of mouse 93M

characteristic: description

characteristic: donor age

text: Male

text: Mus musculus

text: Mus musculus

text: Hippocampal formation

text: Hippocampal formation


text: month

text: adult

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Center for Epigenomics Research, HKUST

text: public

text: Primary Tissue

text: Cerebellum

text: house mouse

text: Cerebellum of mouse 88F

characteristic: donor id

text: Female

characteristic: donor sex

characteristic: mouse id

text: Mus musculus

characteristic: organism

text: Mus musculus

characteristic: strain

text: Cerebellum

characteristic: tissue depot

text: Cerebellum

characteristic: tissue type


text: month

text: adult

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Center for Epigenomics Research, HKUST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Primary Tissue

text: Cerebellum

text: house mouse

text: Cerebellum of mouse 70F

text: Female

text: Mus musculus

text: Mus musculus

text: Cerebellum

text: Cerebellum

characteristic: title


text: month

text: adult

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Center for Epigenomics Research, HKUST

text: public

characteristic: biological replicate

characteristic: biomaterial provider

text: Primary Tissue

characteristic: biomaterial type

text: Cerebellum

characteristic: collection method

text: house mouse

characteristic: common name

text: Cerebellum of mouse 93M

characteristic: description

characteristic: donor age

text: Male

text: Mus musculus

text: Mus musculus

text: Cerebellum

text: Cerebellum


text: month

text: adult

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Center for Epigenomics Research, HKUST

text: public

text: Primary Tissue

text: Cerebral cortex

text: house mouse

text: Cortex of mouse 5M

characteristic: donor id

text: Male

characteristic: donor sex

characteristic: mouse id

text: Mus musculus

characteristic: organism

text: Mus musculus

characteristic: strain

text: Telencephalon

characteristic: tissue depot

text: Telencephalon

characteristic: tissue type


text: month

text: adult

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Center for Epigenomics Research, HKUST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Primary Tissue

text: Cerebral cortex

text: house mouse

text: Cortex of mouse 6M

text: Male

text: Mus musculus

text: Mus musculus

text: Telencephalon

text: Telencephalon

characteristic: title


text: month

text: adult

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Center for Epigenomics Research, HKUST

text: public

characteristic: biological replicate

characteristic: biomaterial provider

text: Primary Tissue

characteristic: biomaterial type

text: Cerebral cortex

characteristic: collection method

text: house mouse

characteristic: common name

text: Cortex of mouse 21F

characteristic: description

characteristic: donor age

text: Female

text: Mus musculus

text: Mus musculus

text: Telencephalon

text: Telencephalon


text: month

text: adult

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Center for Epigenomics Research, HKUST

text: public

text: Primary Tissue

text: Hippocampus

text: house mouse

text: Hippocampus of mouse 5M

characteristic: donor id

text: Male

characteristic: donor sex

characteristic: mouse id

text: Mus musculus

characteristic: organism

text: Mus musculus

characteristic: strain

text: Hippocampal formation

characteristic: tissue depot

text: Hippocampal formation

characteristic: tissue type


text: month

text: adult

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Center for Epigenomics Research, HKUST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Primary Tissue

text: Hippocampus

text: house mouse

text: Hippocampus of mouse 6M

text: Male

text: Mus musculus

text: Mus musculus

text: Hippocampal formation

text: Hippocampal formation

characteristic: title


text: month

text: adult

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Center for Epigenomics Research, HKUST

text: public

characteristic: biological replicate

characteristic: biomaterial provider

text: Primary Tissue

characteristic: biomaterial type

text: Hippocampus

characteristic: collection method

text: house mouse

characteristic: common name

text: Hippocampus of mouse 21F

characteristic: description

characteristic: donor age

text: Female

text: Mus musculus

text: Mus musculus

text: Hippocampal formation

text: Hippocampal formation


text: month

text: adult

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Center for Epigenomics Research, HKUST

text: public

text: Primary Tissue

text: Cerebellum

text: house mouse

text: Cerebellum of mouse 5M

characteristic: donor id

text: Male

characteristic: donor sex

characteristic: mouse id

text: Mus musculus

characteristic: organism

text: Mus musculus

characteristic: strain

text: Cerebellum

characteristic: tissue depot

text: Cerebellum

characteristic: tissue type


text: month

text: adult

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Center for Epigenomics Research, HKUST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Primary Tissue

text: Cerebellum

text: house mouse

text: Cerebellum of mouse 6M

text: Male

text: Mus musculus

text: Mus musculus

text: Cerebellum

text: Cerebellum

characteristic: title


text: month

text: adult

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Center for Epigenomics Research, HKUST

text: public

characteristic: biological replicate

characteristic: biomaterial provider

text: Primary Tissue

characteristic: biomaterial type

text: Cerebellum

characteristic: collection method

text: house mouse

characteristic: common name

text: Cerebellum of mouse 21F

characteristic: description

characteristic: donor age

text: Female

text: Mus musculus

text: Mus musculus

text: Cerebellum

text: Cerebellum


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: collection date

text: mica schist

text: deep subsurface

characteristic: environment (biome)

text: crystalline bedrock

characteristic: environment (feature)

text: microcosm ERC000025

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Outokumpu

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: uncultured bacterium

characteristic: organism

characteristic: project name

text: uncultured bacterium

text: amplicon

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: water

characteristic: description

text: deep subsurface

text: crystalline bedrock

text: microcosm ERC000025

text: Finland

text: Outokumpu

text: metagenome

text: uncultured bacterium

text: uncultured bacterium

text: amplicon

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: collection date

text: glass

text: deep subsurface

characteristic: environment (biome)

text: crystalline bedrock

characteristic: environment (feature)

text: microcosm ERC000025

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Outokumpu

text: metagenome

text: uncultured bacterium

text: uncultured bacterium

text: amplicon


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

text: public

text: mica schist

text: deep subsurface

text: crystalline bedrock

text: microcosm ERC000025

text: Finland

text: Outokumpu

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: uncultured fungus

characteristic: organism

characteristic: project name

text: uncultured fungus

text: amplicon

characteristic: sequencing method


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: water

characteristic: description

text: deep subsurface

text: crystalline bedrock

text: microcosm ERC000025

text: Finland

text: Outokumpu

text: metagenome

text: uncultured fungus

text: uncultured fungus

text: amplicon

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: collection date

text: glass

text: deep subsurface

characteristic: environment (biome)

text: crystalline bedrock

characteristic: environment (feature)

text: microcosm ERC000025

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Outokumpu

text: metagenome

text: uncultured fungus

text: uncultured fungus

text: amplicon


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-08-12-2021-11:40:53:803-91334

tag: Namespace:FRIEDRICH-LOEFFLER-INSTITUT (FLI) Institute for Bacterial Infections and Zoonoses (IBIZ)

text: isolate

text: No

characteristic: environmental sample

text: Ukraine

characteristic: geographic location (region and locality)

text: not collected

characteristic: host health state

text: Bos taurus

characteristic: host scientific name

characteristic: isolate

text: Cattle

characteristic: isolation source

text: Bacillus anthracis

characteristic: organism

text: Bacillus anthracis

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FRIEDRICH-LOEFFLER-INSTITUT (FLI) Institute for Bacterial Infections and Zoonoses (IBIZ)

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-08-12-2021-11:40:53:803-91335

characteristic: Submitter Id

characteristic: collection date

text: isolate

characteristic: description

text: No

text: Ukraine

text: not collected

text: Canis lupus familiaris

text: Dog

text: Bacillus anthracis

text: Bacillus anthracis

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-08-12-2021-11:40:53:804-91336

text: isolate

text: No

characteristic: environmental sample

text: Ukraine

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: not collected

text: Bos taurus

text: Cattle

text: Bacillus anthracis

text: Bacillus anthracis


text: public

text: ena-SAMPLE-TAB-08-12-2021-11:40:53:804-91337

text: isolate

text: No

text: Ukraine

characteristic: isolate

text: Soil

characteristic: isolation source

text: Bacillus anthracis

characteristic: organism

text: Bacillus anthracis

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Furtwangen University

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:Furtwangen University

text: building

characteristic: environment (biome)

text: indoor kitchen

characteristic: environment (feature)

text: kitchen sponge

characteristic: environment (material)

text: Germany

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: indoor metagenome

text: Non-Bacterial Microbiota of Kitchen Sponges

characteristic: project name

text: indoor metagenome

text: IlluminaMiSeq

characteristic: sequencing method


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FIOCRUZ-MG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Not provided

characteristic: collecting institution

text: Not provided

characteristic: collector name

characteristic: description

text: Brazil

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not collected

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: FIOCRUZ-MG

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Hospital da Baleia - Rua Juramento, 1464 - Saudade, Belo Horizonte - MG, 30285-408

text: Not provided

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: organism


characteristic: External Id

text: FIOCRUZ-MG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Not provided

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: male


text: FIOCRUZ-MG

text: public

text: Unidade de Pronto Atendimento Centro Sul - Rua Domingos Vieira, 488 - Santa Efig刃ia, Belo Horizonte - MG, 30110-017

text: Not provided

characteristic: collector name

characteristic: description

text: Brazil

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

text: 033 d1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FIOCRUZ-MG

text: public

text: Hospital das Cl地icas da UFMG - Avenida Prof. Alfredo Balena, 110 - Santa Efig刃ia, Belo Horizonte - MG, 30130-100

text: Not provided

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: male

characteristic: host sex

text: 058 d3

characteristic: host subject id

characteristic: isolate

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FIOCRUZ-MG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Not provided

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: male

text: 060 d1

characteristic: organism


text: FIOCRUZ-MG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Hospital Metropolitano Doutor C四io de Castro - Rua Dona Luiza, 311 - Milion㎎ios, Belo Horizonte - MG, 30620-090

characteristic: collecting institution

text: Not provided

characteristic: collector name

characteristic: description

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: male

text: 080 d1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FIOCRUZ-MG

text: public

text: Not provided

text: Brazil

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

text: 087 d1


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FIOCRUZ-MG

text: public

text: Not provided

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: male

characteristic: host sex

text: 106 d1

characteristic: host subject id

characteristic: isolate

characteristic: title


text: FIOCRUZ-MG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Not provided

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: female

text: 118 d1

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FIOCRUZ-MG

text: public

characteristic: Submitter Id

characteristic: collecting institution

text: Not provided

characteristic: collector name

characteristic: description

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: female

text: 150 d1


PBH 1

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FIOCRUZ-MG

text: public

text: PBH 1

text: Not provided

text: PBH 1

text: Brazil

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

text: PBH 1


PBH 2

text: FIOCRUZ-MG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: PBH 2

text: Institui惚es de Longa Perman刃cia para Idosos -

text: Not provided

text: PBH 2

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: PBH 2

characteristic: title


PBH 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FIOCRUZ-MG

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: PBH 3

text: Not provided

text: PBH 3

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: male

characteristic: organism

text: PBH 3


PBH 4

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FIOCRUZ-MG

text: public

text: PBH 4

characteristic: Submitter Id

text: Unidade de Pronto Atendimento Barreiro - Rua Aur四io Lopes, 20 - Diamante, Belo Horizonte - MG, 30626-002

characteristic: collecting institution

text: Not provided

characteristic: collector name

text: PBH 4

characteristic: description

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: male

text: PBH 4


PBH 5

text: FIOCRUZ-MG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: PBH 5

text: Not provided

text: PBH 5

text: Brazil

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

text: PBH 5


PBH 6

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FIOCRUZ-MG

text: public

text: PBH 6

text: Not provided

text: PBH 6

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: PBH 6

characteristic: title


PBH 7

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FIOCRUZ-MG

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: PBH 7

text: Not provided

text: PBH 7

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: organism

text: PBH 7


PBH 8

text: FIOCRUZ-MG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: PBH 8

characteristic: Submitter Id

text: PSRP -

characteristic: collecting institution

text: Not provided

characteristic: collector name

text: PBH 8

characteristic: description

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: female

text: PBH 8


PBH 9

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FIOCRUZ-MG

text: public

text: PBH 9

text: Not provided

text: PBH 9

text: Brazil

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

text: PBH 9


PBH 10

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FIOCRUZ-MG

text: public

text: PBH 10

text: PSRP -

text: Not provided

text: PBH 10

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: male

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: PBH 10

characteristic: title


PBH 12

text: FIOCRUZ-MG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: PBH 12

text: Not provided

text: PBH 12

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: organism

text: PBH 12


PBH 13

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FIOCRUZ-MG

text: public

text: PBH 13

characteristic: Submitter Id

characteristic: collecting institution

text: Not provided

characteristic: collector name

text: PBH 13

characteristic: description

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: female

text: PBH 13


PBH 14

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FIOCRUZ-MG

text: public

text: PBH 14

text: Not provided

text: PBH 14

text: Brazil

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

text: PBH 14


PBH 16

text: FIOCRUZ-MG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: PBH 16

text: Not provided

text: PBH 16

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: male

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: PBH 16

characteristic: title


PBH 17

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FIOCRUZ-MG

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: PBH 17

text: Not provided

text: PBH 17

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: male

characteristic: organism

text: PBH 17


PBH 18

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FIOCRUZ-MG

text: public

text: PBH 18

characteristic: Submitter Id

characteristic: collecting institution

text: Not provided

characteristic: collector name

text: PBH 18

characteristic: description

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: female

text: PBH 18


PBH 19

text: FIOCRUZ-MG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: PBH 19

text: PSRP -

text: Not provided

text: PBH 19

text: Brazil

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

text: PBH 19


PBH 20

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FIOCRUZ-MG

text: public

text: PBH 20

text: Not provided

text: PBH 20

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: PBH 20

characteristic: title


PBH 22

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FIOCRUZ-MG

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: PBH 22

text: Not provided

text: PBH 22

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: male

characteristic: organism

text: PBH 22


PBH 23

text: FIOCRUZ-MG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: PBH 23

characteristic: Submitter Id

characteristic: collecting institution

text: Not provided

characteristic: collector name

text: PBH 23

characteristic: description

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: male

text: PBH 23


PBH 24

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FIOCRUZ-MG

text: public

text: PBH 24

text: Not provided

text: PBH 24

text: Brazil

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

text: PBH 24


PBH 26

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FIOCRUZ-MG

text: public

text: PBH 26

text: Not provided

text: PBH 26

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: PBH 26

characteristic: title


PBH 27

text: FIOCRUZ-MG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: PBH 27

text: Not provided

text: PBH 27

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: organism

text: PBH 27


PBH 28

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FIOCRUZ-MG

text: public

text: PBH 28

characteristic: Submitter Id

characteristic: collecting institution

text: Not provided

characteristic: collector name

text: PBH 28

characteristic: description

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: male

text: PBH 28


PBH 30

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FIOCRUZ-MG

text: public

text: PBH 30

text: Not provided

text: PBH 30

text: Brazil

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

text: PBH 30


PBH 32

text: FIOCRUZ-MG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: PBH 32

text: Not provided

text: PBH 32

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: male

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: PBH 32

characteristic: title


PBH 35

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FIOCRUZ-MG

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: PBH 35

text: Unidade de Pronto Atendimento Oeste - Avenida Bar黍 Homem de Melo, 1710 - Jardim America, Belo Horizonte - MG, 30160-090

text: Not provided

text: PBH 35

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: male

characteristic: organism

text: PBH 35


PBH 36

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FIOCRUZ-MG

text: public

text: PBH 36

characteristic: Submitter Id

characteristic: collecting institution

text: Not provided

characteristic: collector name

text: PBH 36

characteristic: description

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: female

text: PBH 36


PBH 37

text: FIOCRUZ-MG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: PBH 37

text: PRSP -

text: Not provided

text: PBH 37

text: Brazil

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

text: PBH 37


PBH 40

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FIOCRUZ-MG

text: public

text: PBH 40

text: Not provided

text: PBH 40

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: PBH 40

characteristic: title


PBH 41

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FIOCRUZ-MG

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: PBH 41

text: Hospitais -

text: Not provided

text: PBH 41

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: organism

text: PBH 41


PBH 42

text: FIOCRUZ-MG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: PBH 42

characteristic: Submitter Id

text: Unidade de Pronto Atendimento Leste - Avenida dos Andradas, 7260 - Vera Cruz, Belo Horizonte - MG, 30120-010

characteristic: collecting institution

text: Not provided

characteristic: collector name

text: PBH 42

characteristic: description

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: female

text: PBH 42


PBH 43

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: FIOCRUZ-MG

text: public

text: PBH 43

text: Hospitais -

text: Not provided

text: PBH 43

text: Brazil

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

text: PBH 43


PBH 44

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FIOCRUZ-MG

text: public

text: PBH 44

text: Not provided

text: PBH 44

text: Brazil

text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: PBH 44

characteristic: title


PBH 45

text: FIOCRUZ-MG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: PBH 45

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characteristic: environment (material)

text: Sweden

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metatranscriptome

text: soil metagenome

text: soil metagenome

text: Illumina

text: soil


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DEPARTMENT OF BIOLOGY , LUND UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: Sweden Field-5Time point-T4 drought

text: agricultural soil

text: agricultural soil

text: agricultural soil

text: Sweden

text: metatranscriptome

characteristic: investigation type

text: soil metagenome

characteristic: project name

text: soil metagenome

text: Illumina

characteristic: sequencing method

text: soil

characteristic: soil environmental package

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CNRS

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Input RF2 RNAi (rep1)

characteristic: description

text: Paramecium tetraurelia

characteristic: organism

text: Paramecium tetraurelia

characteristic: strain


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CNRS

text: public

text: Chip H3K27me3 RF2 RNAi (rep1)

text: Paramecium tetraurelia

text: Paramecium tetraurelia


text: CNRS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Chip H3K4me3 RF2 RNAi (rep1)

text: Paramecium tetraurelia

text: Paramecium tetraurelia


text: CNRS

text: public

characteristic: SRA accession

text: Chip H3K9me3 RF2 RNAi (rep1)

text: Paramecium tetraurelia

text: Paramecium tetraurelia


text: CNRS

text: public

text: Input RF2 RNAi (rep2)

text: Paramecium tetraurelia

text: Paramecium tetraurelia


text: CNRS

text: public

text: Chip H3K27me3 RF2 RNAi (rep2)

text: Paramecium tetraurelia

text: Paramecium tetraurelia


text: CNRS

text: public

text: Chip H3K4me3 RF2 RNAi (rep2)

text: Paramecium tetraurelia

text: Paramecium tetraurelia


text: CNRS

text: public

text: Chip H3K9me3 RF2 RNAi (rep2)

text: Paramecium tetraurelia

text: Paramecium tetraurelia


text: CNRS

text: public

text: Genomic DNA after RF2 RNAi during autogamy (T50)

text: Paramecium tetraurelia

text: Paramecium tetraurelia


text: CNRS

text: public

text: mRNA after RF2 RNAi during autogamy (T0)

text: Paramecium tetraurelia

text: Paramecium tetraurelia


text: CNRS

text: public

text: mRNA after RF2 RNAi during autogamy (T10)

text: Paramecium tetraurelia

text: Paramecium tetraurelia


text: CNRS

text: public

text: mRNA after RF2 RNAi during autogamy (T35)

text: Paramecium tetraurelia

text: Paramecium tetraurelia


text: CNRS

text: public

text: mRNA after RF2 RNAi during autogamy (T50)

text: Paramecium tetraurelia

text: Paramecium tetraurelia


text: CNRS

text: public

text: Small RNA after RF2 RNAi at T0 autogamy time point

text: Paramecium tetraurelia

text: Paramecium tetraurelia


text: VTT Technical Research Centre of Finland Ltd

text: public

characteristic: collection date

text: Mica schist surface metagenome

text: deep subsurface

characteristic: environment (biome)

text: crystalline bedrock

characteristic: environment (feature)

text: microcosm mica schist surface ERC000025

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Outokumpu

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: miscellaneous natural or artificial environment

characteristic: miscellaneous environmental package

text: WGA

characteristic: nucleic acid amplification

text: subsurface metagenome

characteristic: project name

text: subsurface metagenome

text: Illumina NovaSeq 6000

text: metagenome

characteristic: target gene

text: Mica Schist Crush 1A


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Mica schist surface metagenome

characteristic: description

text: deep subsurface

text: crystalline bedrock

text: microcosm mica schist surface ERC000025

text: Finland

text: Outokumpu

text: metagenome

text: WGA

text: subsurface metagenome

characteristic: organism

text: subsurface metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: metagenome

text: Mica Schist Crush 1B

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: collection date

text: Mica schist surface metagenome

text: deep subsurface

characteristic: environment (biome)

text: crystalline bedrock

characteristic: environment (feature)

text: microcosm mica schist surface ERC000025

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Outokumpu

characteristic: geographic location (region and locality)

text: metagenome

text: WGA

text: subsurface metagenome

text: subsurface metagenome

text: Illumina NovaSeq 6000

text: metagenome

text: Mica Schist Crush 1C


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Mica schist surface metagenome

text: deep subsurface

text: crystalline bedrock

text: microcosm mica schist surface ERC000025

text: Finland

text: Outokumpu

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: WGA

characteristic: nucleic acid amplification

text: subsurface metagenome

characteristic: project name

text: subsurface metagenome

text: Illumina NovaSeq 6000

text: metagenome

characteristic: target gene

text: Mica Schist Slide 1A


characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Mica schist surface metagenome

characteristic: description

text: deep subsurface

characteristic: environment (biome)

text: crystalline bedrock

characteristic: environment (feature)

text: microcosm mica schist surface ERC000025

text: Finland

text: Outokumpu

text: metagenome

text: WGA

text: subsurface metagenome

characteristic: organism

text: subsurface metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: metagenome

text: Mica Schist Slide 1B

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Mica schist surface metagenome

text: deep subsurface

text: crystalline bedrock

text: microcosm mica schist surface ERC000025

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Outokumpu

characteristic: geographic location (region and locality)

text: metagenome

text: WGA

text: subsurface metagenome

text: subsurface metagenome

text: Illumina NovaSeq 6000

text: metagenome

text: Mica Schist Slide 1C


characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Mica schist surface metagenome

characteristic: description

text: deep subsurface

text: crystalline bedrock

text: microcosm mica schist surface ERC000025

text: Finland

text: Outokumpu

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: WGA

characteristic: nucleic acid amplification

text: subsurface metagenome

characteristic: project name

text: subsurface metagenome

text: Illumina NovaSeq 6000

text: metagenome

characteristic: target gene

text: Mica Schist Crush 2A


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Mica schist surface metagenome

text: deep subsurface

characteristic: environment (biome)

text: crystalline bedrock

characteristic: environment (feature)

text: microcosm mica schist surface ERC000025

text: Finland

text: Outokumpu

text: metagenome

text: WGA

text: subsurface metagenome

characteristic: organism

text: subsurface metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: metagenome

text: Mica Schist Crush 2B

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Mica schist surface metagenome

characteristic: description

text: deep subsurface

text: crystalline bedrock

text: microcosm mica schist surface ERC000025

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Outokumpu

characteristic: geographic location (region and locality)

text: metagenome

text: WGA

text: subsurface metagenome

text: subsurface metagenome

text: Illumina NovaSeq 6000

text: metagenome

text: Mica Schist Crush 2C


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Mica schist surface metagenome

text: deep subsurface

text: crystalline bedrock

text: microcosm mica schist surface ERC000025

text: Finland

text: Outokumpu

text: metagenome

characteristic: investigation type

characteristic: miscellaneous environmental package

text: WGA

characteristic: nucleic acid amplification

text: subsurface metagenome

characteristic: project name

text: subsurface metagenome

text: Illumina NovaSeq 6000

text: metagenome

characteristic: target gene

text: Mica Schist Slide 2A


characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Mica schist surface metagenome

characteristic: description

text: deep subsurface

characteristic: environment (biome)

text: crystalline bedrock

characteristic: environment (feature)

text: microcosm mica schist surface ERC000025

text: Finland

text: Outokumpu

text: metagenome

text: WGA

text: subsurface metagenome

characteristic: organism

text: subsurface metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: metagenome

text: Mica Schist Slide 2B

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Mica schist surface metagenome

text: deep subsurface

text: crystalline bedrock

text: microcosm mica schist surface ERC000025

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Outokumpu

characteristic: geographic location (region and locality)

text: metagenome

text: WGA

text: subsurface metagenome

text: subsurface metagenome

text: Illumina NovaSeq 6000

text: metagenome

text: Mica Schist Slide 2C


text: The Ohio State University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

tag: Namespace:The Ohio State University

characteristic: Submitter Id

characteristic: description

text: Yes

characteristic: environmental sample

text: USA

text: California

text: metagenome

text: metagenome


characteristic: ENA-CHECKLIST

text: public

tag: Namespace:Department of General Surgery, The Third Affiliated Hospital of Southern Medical University

text: ArrayExpress

characteristic: broker name

text: SK-N-SH

characteristic: cell line

text: neuroblast (sensu Vertebrata)

characteristic: cell type

text: human

characteristic: common name

text: Protocols: Cell lines used in our study were purchased from Procell Life Science & Technology (Wuhan, China), and were cultured in standard medium containing 10% fetal bovine serum. Cell lines authentication were performed using short tandem repeat DNA profiling, and mycoplasma detection was regularly performed using a PCR-based method. All cell lines were cultured in a humidified atmosphere with 5% CO2 at 37°C Total RNA was isolated using the Trizol reagent (Invitrogen), and conversion to cDNA was completed using the GoScript Reverse Transcription System (Promega). The relevant mRNA expression of target genes was quantified by Real-time PCR using a SYBR Green PCR Kit (Invitrogen) normalized to GAPDH. Sequenced reads were trimmed for adaptor sequence, and masked for low-complexity or low-quality sequence, then mapped to hg19 whole genome using Tophat2 v2.0.13 with parameters --read_mismatches 2 --read_gap_length 2 --read_edit_dist 2

text: neuroblastoma

characteristic: disease

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: brain

characteristic: organism part

text: Homo sapiens

text: SK-control

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Department of General Surgery, The Third Affiliated Hospital of Southern Medical University

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: SK-N-SH

text: neuroblast (sensu Vertebrata)

text: human

text: neuroblastoma

text: Homo sapiens

text: Homo sapiens

text: brain

text: Homo sapiens


characteristic: ENA first public

text: Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2021-11-15

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-465503/2022

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2022-01-17

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2021-12-27

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status


characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2022-02-14

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


text: public

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: Human

text: n_infections=2,last_infection_date=2021-01-04

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided