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text: Oslo University Hospital, Department of Microbiology ; P.O.Box 4956 Nydalen, N-0424 Oslo, Norway

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text: not provided

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characteristic: geographic location (country and/or sea)

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characteristic: geographic location (region and locality)

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characteristic: host common name

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characteristic: title


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characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: authors

text: ELIXIR-Norway

text: not provided

text: Norway

text: Vestfold og Telemark

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

text: University Hospital of Northern Norway, Department for Microbiology and Infectious Disease Control ; P.O.Box 56, N-9038 Tromsoe, Norway

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

text: Nordland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: authors

text: ELIXIR-Norway

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: Oslo

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

text: not provided

text: Norway

text: Sogn og Fjordane

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: authors

text: ELIXIR-Norway

characteristic: broker name

text: Unilabs Laboratory Medicine ; Leirvollen 19, N-3736 Skien, Norway

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

text: Vestfold og Telemark

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: Norwegian Institute of Public Health (NIPH)

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

text: Department of Medical Microbiology, St. Olavs hospital ; P.O.box 3250 Torgarden, N-7006 Trondheim, Norway

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: Trondelag

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: Kathrine Stene-Johansen, Kamilla Heddeland Instefjord, Hilde Elshaug, Garcia Llorente Ignacio, Jon Bråte, Engebretsen Serina Beate, Pedersen Benedikte Nevjen, Line Victoria Moen, Hilde Nordby Falkenhaug, Debech Nadia, Atiya R Ali, Marie Paulsen Madsen, Rasmus Riis Kopperud, Hilde Vollan, Karoline Bragstad, Olav Hungnes

characteristic: authors

text: ELIXIR-Norway

text: not provided

text: Norway

text: Nordland

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

text: Oslo

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: authors

text: ELIXIR-Norway

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: Viken

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

text: Ostfold Hospital Trust - Kalnes, Centre for Laboratory Medicine, Section for gene technology and infection serology ; P.O.Box 300, N-1714 Graalum, Norway

text: not provided

text: Norway

text: Viken

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: authors

text: ELIXIR-Norway

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

text: Oslo

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: Agder

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: authors

text: ELIXIR-Norway

text: not provided

text: Norway

text: Troms og Finnmark

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

text: Oslo

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: authors

text: ELIXIR-Norway

text: Department of Medical Microbiology - section Molde, Molde Hospital ; Parkveien 84, N-6407 Molde, Norway

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: More og Romsdal

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

text: not provided

text: Norway

text: Oslo

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: authors

text: ELIXIR-Norway

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

text: Viken

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

text: Furst Medical Laboratory ; Soeren Bulls vei 25, N-1051 Oslo, Norway

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: Vestland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: authors

text: ELIXIR-Norway

text: Haugesund Hospital, laboratory for Medical Microbiology ; P.O.Box 2170, N-5504 Haugesund, Norway

text: not provided

text: Norway

text: Trondelag

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

text: Troms og Finnmark

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: authors

text: ELIXIR-Norway

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: Viken

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

text: not provided

text: Norway

text: Agder

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: authors

text: ELIXIR-Norway

characteristic: broker name

text: Unilabs Laboratory Medicine ; Silurveien 2 B, N-0380 Oslo, Norway

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

text: Viken

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: Oslo

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: authors

text: ELIXIR-Norway

text: not provided

text: Norway

text: Rogaland

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

text: Department Medical Microbiology, Baerum Hospital, Vestre Viken Health Trust ; P.O.Box 800, N-3004 Drammen, Norway

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

text: Innlandet

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: authors

text: ELIXIR-Norway

text: Medical Microbiology Unit, Department for Laboratory Medicine, Drammen Hospital, Vestre Viken Health Trust ; P.O.Box 800, N-3004 Drammen, Norway

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: Viken

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

text: not provided

text: Norway

text: Oslo

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: authors

text: ELIXIR-Norway

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

text: Rogaland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: Viken

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: authors

text: ELIXIR-Norway

text: not provided

text: Norway

text: Viken

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

text: Viken

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: authors

text: ELIXIR-Norway

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: Oslo

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

text: Hospital of Southern Norway - Kristiansand, Department of Medical Microbiology ; P.O.Box 416 Lundsiden, N-4604 Kristiansand, Norway

text: not provided

text: Norway

text: Agder

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: authors

text: ELIXIR-Norway

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

text: Vestfold og Telemark

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: Viken

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: authors

text: ELIXIR-Norway

text: not provided

text: Norway

text: Trondelag

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

text: Haukeland University Hospital, Dept. of Microbiology ; P.O.Box 1400, N-5021 Bergen, Norway

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

text: Vestland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: authors

text: ELIXIR-Norway

text: Vestfold Hospital, Toensberg, Department of Microbiology ; P.O.Box 2168, N-3103 Toensberg, Norway

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: Vestfold og Telemark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

text: Foerde Hospital, Department of Microbiology ; P.O.Box 1000, N-6807 Foerde, Norway

text: not provided

text: Norway

text: Vestland

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: authors

text: ELIXIR-Norway

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

text: Rogaland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: Viken

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: authors

text: ELIXIR-Norway

text: not provided

text: Norway

text: Vestfold og Telemark

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: SRA accession

tag: Namespace:THE WALTER AND ELIZA HALL INSTITUTE OF MEDICAL RESEARCH

characteristic: Submitter Id

text: house mouse

characteristic: common name

text: Advanced age or ‘older’ (12-15 months) male C57BL/6J mice. Sham-operated animals that underwent anaesthetic, neck incision and artery (common and external arteries) isolation only.

characteristic: description

text: Mus musculus

characteristic: organism

text: Mus musculus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: THE WALTER AND ELIZA HALL INSTITUTE OF MEDICAL RESEARCH

characteristic: INSDC center name

text: public

text: house mouse

text: Advanced age or ‘older’ (12-15 months) male C57BL/6J mice that underwent a 20 minute mid-cerebral artery occlusion (MCAO) model.

text: Mus musculus

text: Mus musculus


characteristic: INSDC first public

text: public

characteristic: INSDC status

text: house mouse

text: Young (8-10 weeks) male C57BL/6J mice. Sham-operated animals that underwent anaesthetic, neck incision and artery (common and external arteries) isolation only.

text: Mus musculus

text: Mus musculus


text: public

text: house mouse

text: Young (8-10 weeks) male C57BL/6J mice that underwent a 20 minute mid-cerebral artery occlusion (MCAO) model.

text: Mus musculus

text: Mus musculus


text: public

text: house mouse

text: Mus musculus

text: Mus musculus


characteristic: GISAID Accession ID

text: Norwegian Institute of Public Health (NIPH)

text: public

text: Kathrine Stene-Johansen, Kamilla Heddeland Instefjord, Hilde Elshaug, Garcia Llorente Ignacio, Jon Bråte, Engebretsen Serina Beate, Pedersen Benedikte Nevjen, Line Victoria Moen, Hilde Nordby Falkenhaug, Debech Nadia, Atiya R Ali, Marie Paulsen Madsen, Rasmus Riis Kopperud, Hilde Vollan, Karoline Bragstad, Olav Hungnes

characteristic: authors

text: ELIXIR-Norway

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Viken

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

text: Akershus University Hospital, Department for Microbiology and Infectious Disease Control ; P.O.Box 1000, N-1478 Loerenskog, Norway

text: not provided

text: Norway

text: Viken

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: not provided

characteristic: organism


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: authors

text: ELIXIR-Norway

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Oslo

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: ELIXIR-Norway

text: Furst Medical Laboratory ; Soeren Bulls vei 25, N-1051 Oslo, Norway

text: not provided

text: Norway

text: Oslo

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: authors

text: ELIXIR-Norway

characteristic: broker name

text: Unilabs Laboratory Medicine ; Leirvollen 19, N-3736 Skien, Norway

text: not provided

text: Norway

text: Vestfold og Telemark

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: not provided

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: ELIXIR-Norway

text: Oslo University Hospital, Department of Microbiology ; P.O.Box 4956 Nydalen, N-0424 Oslo, Norway

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Oslo

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: authors

text: ELIXIR-Norway

text: not provided

text: Norway

text: Agder

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: ELIXIR-Norway

characteristic: broker name

text: Medical Microbiology Unit, Department for Laboratory Medicine, Drammen Hospital, Vestre Viken Health Trust ; P.O.Box 800, N-3004 Drammen, Norway

text: not provided

text: Norway

text: Viken

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: not provided

characteristic: organism


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: authors

text: ELIXIR-Norway

text: Ostfold Hospital Trust - Kalnes, Centre for Laboratory Medicine, Section for gene technology and infection serology ; P.O.Box 300, N-1714 Graalum, Norway

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Viken

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: ELIXIR-Norway

text: Nordland Hospital - Bodo, Laboratory Department, Molecular Biology Unit ; P.O.Box 1480, N-8092 Bodo, Norway

text: not provided

text: Norway

text: Nordland

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: authors

text: ELIXIR-Norway

characteristic: broker name

text: Vestfold Hospital, Toensberg, Department of Microbiology ; P.O.Box 2168, N-3103 Toensberg, Norway

text: not provided

text: Norway

text: Vestfold og Telemark

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: not provided

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: ELIXIR-Norway

text: Department of Medical Microbiology, St. Olavs hospital ; P.O.box 3250 Torgarden, N-7006 Trondheim, Norway

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Viken

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: authors

text: ELIXIR-Norway

text: not provided

text: Norway

text: Trondelag

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: isolation source host associated

text: Severe acute respiratory syndrome coronavirus 2

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: ELIXIR-Norway

characteristic: broker name

text: not provided

text: Norway

text: Vestfold og Telemark

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: not provided

characteristic: organism


characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

tag: Namespace:Biomedical Centre Martin, Jessenius Faculty of Medicine in Martin, Comenius University

characteristic: Submitter Id

text: Science Park of Comenius University of Bratislava

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Slovakia

characteristic: geographic location (country and/or sea)

unit: year

characteristic: host age

text: Human

text: not provided

text: Homo sapiens

text: male

text: RNA

text: Nasopharyngeal swab

characteristic: isolation source-host associated

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Biomedical Centre Martin, Jessenius Faculty of Medicine in Martin, Comenius University

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: broker name

text: not provided

text: Slovakia

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

text: RNA

text: Nasopharyngeal swab


characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Slovakia

text: Human

text: not provided

text: Homo sapiens

text: male

characteristic: host sex

text: RNA

characteristic: isolate

text: Nasopharyngeal swab

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: GISAID Accession ID

text: public

characteristic: authors

text: ELIXIR-Norway

text: University Hospital of Northern Norway, Department for Microbiology and Infectious Disease Control ; P.O.Box 56, N-9038 Tromsoe, Norway

text: not provided

characteristic: collector name

text: Norway

characteristic: geographic location (country and/or sea)

text: Troms og Finnmark

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

text: not provided

text: Norway

text: Viken

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: GISAID Accession ID

text: public

characteristic: authors

text: ELIXIR-Norway

text: Haugesund Hospital, laboratory for Medical Microbiology ; P.O.Box 2170, N-5504 Haugesund, Norway

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

text: Rogaland

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: isolate

text: not provided

characteristic: organism


characteristic: External Id

text: Norwegian Institute of Public Health (NIPH)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ELIXIR-Norway

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: Innlandet

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: GISAID Accession ID

text: public

characteristic: Submitter Id

text: Kathrine Stene-Johansen, Kamilla Heddeland Instefjord, Hilde Elshaug, Garcia Llorente Ignacio, Jon Bråte, Engebretsen Serina Beate, Pedersen Benedikte Nevjen, Line Victoria Moen, Hilde Nordby Falkenhaug, Debech Nadia, Atiya R Ali, Marie Paulsen Madsen, Rasmus Riis Kopperud, Hilde Vollan, Karoline Bragstad, Olav Hungnes

characteristic: authors

text: ELIXIR-Norway

characteristic: broker name

characteristic: collecting institution

text: not provided

text: Norway

text: Agder

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ELIXIR-Norway

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

text: Oslo

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: isolate

text: not provided

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: GISAID Accession ID

text: public

characteristic: Submitter Id

characteristic: authors

text: ELIXIR-Norway

text: Innlandet Hospital Trust, Division Lillehammer, Department for Medical Microbiology ; P.O.Box 990, N-2629 Lillehammer, Norway

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: Innlandet

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ELIXIR-Norway

characteristic: broker name

characteristic: collecting institution

text: not provided

text: Norway

text: Trondelag

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: GISAID Accession ID

text: public

characteristic: Submitter Id

characteristic: authors

text: ELIXIR-Norway

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

text: Viken

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: isolate

text: not provided

characteristic: organism


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ELIXIR-Norway

text: Foerde Hospital, Department of Microbiology ; P.O.Box 1000, N-6807 Foerde, Norway

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: Vestland

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: GISAID Accession ID

text: public

characteristic: Submitter Id

characteristic: authors

text: ELIXIR-Norway

characteristic: broker name

characteristic: collecting institution

text: not provided

text: Norway

text: Viken

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ELIXIR-Norway

text: Unilabs Laboratory Medicine ; Leirvollen 19, N-3736 Skien, Norway

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

text: Vestfold og Telemark

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: isolate

text: not provided

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: GISAID Accession ID

text: public

characteristic: Submitter Id

characteristic: authors

text: ELIXIR-Norway

text: Department of Medical Microbiology - section Molde, Molde Hospital ; Parkveien 84, N-6407 Molde, Norway

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: More og Romsdal

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ELIXIR-Norway

characteristic: broker name

characteristic: collecting institution

text: not provided

text: Norway

text: Trondelag

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: GISAID Accession ID

text: public

characteristic: Submitter Id

characteristic: authors

text: ELIXIR-Norway

text: Hospital of Southern Norway - Kristiansand, Department of Medical Microbiology ; P.O.Box 416 Lundsiden, N-4604 Kristiansand, Norway

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

text: Agder

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: isolate

text: not provided

characteristic: organism


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ELIXIR-Norway

text: Furst Medical Laboratory ; Soeren Bulls vei 25, N-1051 Oslo, Norway

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: Oslo

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: GISAID Accession ID

text: public

characteristic: Submitter Id

characteristic: authors

text: ELIXIR-Norway

characteristic: broker name

characteristic: collecting institution

text: not provided

text: Norway

text: Viken

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ELIXIR-Norway

text: Dept. of Medical Microbiology, Stavanger University Hospital, Helse Stavanger HF ; P.O.Box 8100, N-4068 Stavanger, Norway

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

text: Rogaland

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: isolate

text: not provided

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: GISAID Accession ID

text: public

characteristic: Submitter Id

characteristic: authors

text: ELIXIR-Norway

text: Vestfold Hospital, Toensberg, Department of Microbiology ; P.O.Box 2168, N-3103 Toensberg, Norway

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: Vestfold og Telemark

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ELIXIR-Norway

characteristic: broker name

characteristic: collecting institution

text: not provided

text: Norway

text: Oslo

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: GISAID Accession ID

text: public

characteristic: Submitter Id

characteristic: authors

text: ELIXIR-Norway

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

text: Viken

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: isolate

text: not provided

characteristic: organism


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Public Health Authority of the Slovak Republic

text: not provided

characteristic: common name

text: Slovakia

characteristic: geographic location (country and/or sea)

characteristic: host age

text: Human

text: not provided

text: Homo sapiens

text: female

text: RNA

text: Nasopharyngeal swab

characteristic: isolation source-host associated

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Public Health Authority of the Slovak Republic

text: public

characteristic: Submitter Id

characteristic: broker name

characteristic: collecting institution

text: not provided

text: Slovakia

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

text: RNA

text: Nasopharyngeal swab


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: collection date

text: not provided

characteristic: collector name

text: Slovakia

text: Human

text: not provided

text: Homo sapiens

text: female

characteristic: host sex

text: RNA

characteristic: isolate

text: Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: authors

text: ELIXIR-Norway

text: Oslo University Hospital, Department of Microbiology ; P.O.Box 4956 Nydalen, N-0424 Oslo, Norway

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: Oslo

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolation source host associated

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

characteristic: collecting institution

text: not provided

text: Norway

text: Innlandet

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: authors

text: ELIXIR-Norway

characteristic: collection date

text: not provided

characteristic: collector name

text: Norway

text: Viken

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: isolate

text: not provided

characteristic: organism


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: SC

text: Health Services Laboratories

text: not provided

text: Samples prepared at Health Services Laboratories by Health Services Laboratories and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Human

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: active surveillance in response to outbreak

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SC

characteristic: broker name

text: Lighthouse Lab in Glasgow

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Samples prepared at Lighthouse Lab in Glasgow by Harper VanSteenhouse, Yumi Kasai, David Gray, Carol Clugston, Anna Dominiczak and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: Scotland

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: SC

text: Lighthouse Lab in Alderley Park

text: not provided

characteristic: collector name

text: Samples prepared at Lighthouse Lab in Alderley Park by Jacquelyn Wynn, Mairead Hyland, The Lighthouse Lab in Alderley Park and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: Wales

text: Human

text: not provided

text: Human

text: not provided

characteristic: host sex

text: not provided

text: not provided

characteristic: isolate

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SC

text: Lighthouse Lab in Glasgow

text: not provided

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Northern Ireland

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Human

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: sample capture status

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SC

characteristic: broker name

text: Lighthouse Lab in Milton Keynes

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Samples prepared at Lighthouse Lab in Milton Keynes by The Lighthouse Lab in Milton Keynes and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: Northern Ireland

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SC

text: Lighthouse Lab in Milton Keynes

text: not provided

characteristic: collector name

text: United Kingdom

text: England

text: Human

text: not provided

text: Human

text: not provided

characteristic: host sex

text: not provided

text: not provided

characteristic: isolate

characteristic: organism


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SC

text: Lighthouse Lab in Alderley Park

text: not provided

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Human

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SC

characteristic: broker name

text: Lighthouse Lab in Glasgow

characteristic: collecting institution

characteristic: collection date

text: not provided

text: United Kingdom

text: England

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SC

text: Rosalind Franklin Laboratory

text: not provided

characteristic: collector name

text: Samples prepared at Rosalind Franklin Laboratory by Donald Fraser, Suki Lee, Rob Howes, The Rosalind Franklin Laboratory and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

text: United Kingdom

text: Wales

text: Human

text: not provided

text: Human

text: not provided

characteristic: host sex

text: not provided

text: not provided

characteristic: isolate

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SC

text: Rosalind Franklin Laboratory

text: not provided

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Human

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: sample capture status

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SC

characteristic: broker name

text: Lighthouse Lab in Glasgow

characteristic: collecting institution

characteristic: collection date

text: not provided

text: United Kingdom

text: Wales

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

text: Norwegian Institute of Public Health (NIPH)

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Kathrine Stene-Johansen, Kamilla Heddeland Instefjord, Hilde Elshaug, Garcia Llorente Ignacio, Jon Bråte, Engebretsen Serina Beate, Pedersen Benedikte Nevjen, Line Victoria Moen, Hilde Nordby Falkenhaug, Debech Nadia, Atiya R Ali, Marie Paulsen Madsen, Rasmus Riis Kopperud, Hilde Vollan, Karoline Bragstad, Olav Hungnes

characteristic: authors

text: ELIXIR-Norway

text: not provided

characteristic: collector name

text: Norway

text: Vestfold og Telemark

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: isolate

text: not provided

characteristic: isolation source host associated

characteristic: organism


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ELIXIR-Norway

characteristic: broker name

text: Innlandet Hospital Trust, Division Lillehammer, Department for Medical Microbiology ; P.O.Box 990, N-2629 Lillehammer, Norway

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: Oslo

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: authors

text: ELIXIR-Norway

text: not provided

text: Norway

text: Agder

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ELIXIR-Norway

characteristic: broker name

text: Foerde Hospital, Department of Microbiology ; P.O.Box 1000, N-6807 Foerde, Norway

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Norway

text: Vestland

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: isolate

text: not provided

characteristic: isolation source host associated

characteristic: organism


E-MTAB-9436_2:316del346_1.6 hexandiol_1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-9436_2:316del346_1.6 hexandiol_1

tag: Namespace:Department of Molecular Neuroscience, UCL Institute of Neurology

text: ArrayExpress

text: HEK293 Flp-In

characteristic: cell line

text: human

characteristic: common name

characteristic: date

text: Protocols: This experiment identified TDP-43-RNA binding sites in 293 Hek FlipIn cells. Cells were grown to 80% confluence, transgene was induced by doxycycline for 24h , UV crosslinked on ice and then lysed in RIPA buffer. Hexanediol treated samples were pretreated with 8% 1,6- and 2,5-Hexanediol for 5 min at 37 degrees and then cross-linked on ice. 0.4 Units of RNaseI and 4 Units Turbo DNase were added per 1 ml of cell lysate at 1mg/ml protein concentration for RNA fragmentation. Negative controls (no-UV) were prepared. Antibodies against GFP coupled to magnetic Protein G beads or GFP-TRAP_MA beads (Chromotek, gtma-20) were used to isolate Protein-RNA complexes, and RNA was ligated to a pre-adenylated infra-red labelled IRL3 adaptor. For some experiments we chose to multiplex a maximum of 3 samples before the protein gel which required for the ligation step a bar-coded unlabelled L3 adaptor. The complexes were then size-separated by SDS-PAGE, blotted onto nitrocellulose and visualised by Odyssey scanning. For the multiplexed sample 1 replicated was run in parallel with the IRL3 to allow quality control of the RNP complex on the membrane and to help with cutting of the bands. RNA was released from membrane by proteinase K digestion and recovered by precipitation. cDNA was synthesized with Superscript IV Reverse Transcriptase (Life Technologies) and AMPure XP beads purification (Beckman- Coulter, USA), then circularised using Circligase II (Epicentre) followed by AMPure XP beads purification. After PCR amplification, libraries were size-selected with Ampure beads (if necessary by gel-purification) and quality controlled for sequencing. For the ‘RNase experiment’ we use 4 units Turbo DNase and 0.1 (low), 0.4 (medium) or 2 units (high) per 1 ml of lysate at 1mg/ml protein concentration. cDNA was synthesized with Superscript IV Reverse Transcriptase (Life Technologies) and AMPure XP beads purification (Beckman- Coulter, USA), then circularised using Circligase II (Epicentre) followed by AMPure XP beads purification. After PCR amplification, libraries were size-selected with Ampure beads (if necessary by gel-purification) and quality controlled for sequencing.

characteristic: description

text: embryo

characteristic: developmental stage

text: normal

characteristic: disease

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: kidney

characteristic: organism part

text: Homo sapiens

text: 316del346_1.6 hexandiol_1

characteristic: title


E-MTAB-9436_2:316del346_1.6 hexandiol_2

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Department of Molecular Neuroscience, UCL Institute of Neurology

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-9436_2:316del346_1.6 hexandiol_2

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: HEK293 Flp-In

text: human

text: embryo

text: normal

text: Homo sapiens

text: Homo sapiens

text: kidney

text: Homo sapiens

text: 316del346_1.6 hexandiol_2


E-MTAB-9436_2:316del346_1.6 hexandiol_3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-9436_2:316del346_1.6 hexandiol_3

text: ArrayExpress

text: HEK293 Flp-In

text: human

text: embryo

text: normal

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: kidney

text: Homo sapiens

text: 316del346_1.6 hexandiol_3


text: public

characteristic: SRA accession

text: ArrayExpress

text: HEK293 Flp-In

characteristic: cell line

text: human

characteristic: common name

characteristic: date

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: kidney

text: Homo sapiens