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text: feces metagenome

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characteristic: INSDC center name

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text: feces metagenome

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characteristic: ENA-LAST-UPDATE

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characteristic: lat lon

text: feces metagenome

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text: feces metagenome

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text: feces metagenome

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characteristic: ENA-LAST-UPDATE

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text: feces metagenome

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characteristic: ENA-CHECKLIST

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text: 41.5600 N 6.8762 W

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text: feces metagenome

text: feces metagenome

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characteristic: ENA-CHECKLIST

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text: Yes

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characteristic: geographic location (country and/or sea)

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text: faeces

text: 41.5600 N 6.8757 W

text: feces metagenome

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characteristic: INSDC center name

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text: 41.5610 N 6.8761 W

characteristic: lat lon

text: feces metagenome

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text: feces metagenome

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text: public

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characteristic: isolation source

text: 41.5610 N 6.8760 W

text: feces metagenome

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text: public

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text: Portugal

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text: faeces

text: 41.5610 N 6.8759 W

text: feces metagenome

text: feces metagenome

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characteristic: INSDC center name

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text: Yes

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text: Portugal

characteristic: geographic location (country and/or sea)

text: Bragan�a

characteristic: geographic location (region and locality)

text: faeces

text: 41.5190 N 6.7250 W

text: feces metagenome

text: feces metagenome

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characteristic: ENA-LAST-UPDATE

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text: public

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text: 41.5190 N 6.7249 W

characteristic: lat lon

text: feces metagenome

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text: feces metagenome

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text: public

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text: Yes

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text: 41.5190 N 6.7248 W

text: feces metagenome

text: feces metagenome

text: faeces


characteristic: INSDC center name

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text: public

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characteristic: Submitter Id

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text: Yes

text: Portugal

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text: faeces

text: 41.5190 N 6.7243 W

text: feces metagenome

text: feces metagenome

text: faeces


characteristic: ENA-LAST-UPDATE

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text: public

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characteristic: description

text: Yes

characteristic: environmental sample

text: Portugal

characteristic: geographic location (country and/or sea)

text: Bragan�a

characteristic: geographic location (region and locality)

text: faeces

text: 41.5480 N 6.6909 W

text: feces metagenome

text: feces metagenome

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characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

text: public

tag: Namespace:University of Toronto

text: white clover

characteristic: common name

text: A few field-collected leaves of Trifolium repens

characteristic: estimated size

text: USA

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Albuquerque

text: field

characteristic: growth facility

text: Collected and stored at -20�C before drying

characteristic: isolation and growth condition

characteristic: number of replicons

text: Trifolium repens

characteristic: organism

text: Creeping white clover

characteristic: organism common name

text: Sporophyte vegetative stage

characteristic: plant developmental stage

text: Field soil

characteristic: plant growth medium

text: Leaf

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text: healthy

characteristic: sample health state

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characteristic: title


characteristic: ENA-CHECKLIST

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text: University of Toronto

characteristic: INSDC center name

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text: public

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characteristic: Submitter Id

characteristic: collection date

text: white clover

characteristic: description

text: Belgium

characteristic: geographic location (country and/or sea)

text: Antwerp

characteristic: geographic location (region and locality)

text: field

text: Trifolium repens

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characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

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text: Australia

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text: Trifolium repens

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characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

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text: University of Toronto

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text: public

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text: white clover

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characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

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characteristic: common name

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text: Colombia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Bogota

characteristic: geographic location (region and locality)

text: field

characteristic: growth facility

characteristic: isolation and growth condition

characteristic: number of replicons

text: Trifolium repens

characteristic: organism

text: Creeping white clover

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text: Sporophyte vegetative stage

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characteristic: ENA-CHECKLIST

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characteristic: External Id

text: University of Toronto

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text: white clover

text: Argentina

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text: Creeping white clover

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text: Field soil

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text: University of Toronto

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text: Canada

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Calgary

characteristic: geographic location (region and locality)

text: field

characteristic: growth facility

characteristic: isolation and growth condition

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

text: Field soil

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text: healthy

characteristic: sample health state

text: Trifolium repens

characteristic: title


characteristic: ENA-CHECKLIST

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text: University of Toronto

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text: University of Toronto

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characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: field

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characteristic: ENA-CHECKLIST

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text: white clover

text: New Zealand

text: Christchurch

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text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

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characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

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characteristic: common name

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text: Japan

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Hiroshima

characteristic: geographic location (region and locality)

text: field

characteristic: growth facility

characteristic: isolation and growth condition

characteristic: number of replicons

text: Trifolium repens

characteristic: organism

text: Creeping white clover

characteristic: organism common name

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

text: healthy

text: Trifolium repens


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Toronto

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: white clover

text: China

text: Kunming

text: field

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

characteristic: plant developmental stage

text: Field soil

characteristic: plant growth medium

text: Leaf

characteristic: plant structure

text: healthy

text: Trifolium repens


characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

text: public

text: white clover

characteristic: common name

characteristic: description

characteristic: estimated size

text: Japan

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Kyoto

characteristic: geographic location (region and locality)

text: field

characteristic: growth facility

characteristic: isolation and growth condition

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

characteristic: ploidy

text: healthy

characteristic: sample health state

text: Trifolium repens

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Toronto

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: white clover

text: Germany

text: Landshut

text: field

characteristic: number of replicons

text: Trifolium repens

characteristic: organism

text: Creeping white clover

characteristic: organism common name

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

text: healthy

text: Trifolium repens


characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

text: public

text: white clover

characteristic: common name

characteristic: description

characteristic: estimated size

text: Sweden

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Linkoping

characteristic: geographic location (region and locality)

text: field

characteristic: growth facility

characteristic: isolation and growth condition

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

characteristic: plant developmental stage

text: Field soil

characteristic: plant growth medium

text: Leaf

characteristic: plant structure

text: healthy

text: Trifolium repens


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Toronto

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: white clover

text: Ecuador

text: Loja

text: field

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

characteristic: ploidy

text: healthy

characteristic: sample health state

text: Trifolium repens

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

text: public

text: white clover

characteristic: common name

characteristic: description

characteristic: estimated size

text: Colombia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Medellin

characteristic: geographic location (region and locality)

text: field

characteristic: growth facility

characteristic: isolation and growth condition

characteristic: number of replicons

text: Trifolium repens

characteristic: organism

text: Creeping white clover

characteristic: organism common name

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

text: healthy

text: Trifolium repens


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Toronto

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: white clover

text: Australia

text: Melbourne

text: field

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

characteristic: plant developmental stage

text: Field soil

characteristic: plant growth medium

text: Leaf

characteristic: plant structure

text: healthy

text: Trifolium repens


characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

text: public

text: white clover

characteristic: common name

characteristic: description

characteristic: estimated size

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Memphis

characteristic: geographic location (region and locality)

text: field

characteristic: growth facility

characteristic: isolation and growth condition

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

characteristic: ploidy

text: healthy

characteristic: sample health state

text: Trifolium repens

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Toronto

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: white clover

text: Mexico

text: field

characteristic: number of replicons

text: Trifolium repens

characteristic: organism

text: Creeping white clover

characteristic: organism common name

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

text: healthy

text: Trifolium repens


characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

text: public

text: white clover

characteristic: common name

characteristic: description

characteristic: estimated size

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Munich

characteristic: geographic location (region and locality)

text: field

characteristic: growth facility

characteristic: isolation and growth condition

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

characteristic: plant developmental stage

text: Field soil

characteristic: plant growth medium

text: Leaf

characteristic: plant structure

text: healthy

text: Trifolium repens


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Toronto

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: white clover

text: France

text: Paris

text: field

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

characteristic: ploidy

text: healthy

characteristic: sample health state

text: Trifolium repens

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

text: public

text: white clover

characteristic: common name

characteristic: description

characteristic: estimated size

text: Ecuador

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Quito

characteristic: geographic location (region and locality)

text: field

characteristic: growth facility

characteristic: isolation and growth condition

characteristic: number of replicons

text: Trifolium repens

characteristic: organism

text: Creeping white clover

characteristic: organism common name

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

text: healthy

text: Trifolium repens


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Toronto

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: white clover

text: Iran

text: Tehran

text: field

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

characteristic: plant developmental stage

text: Field soil

characteristic: plant growth medium

text: Leaf

characteristic: plant structure

text: healthy

text: Trifolium repens


characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

text: public

text: white clover

characteristic: common name

characteristic: description

characteristic: estimated size

text: Greece

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Thessaloniki

characteristic: geographic location (region and locality)

text: field

characteristic: growth facility

characteristic: isolation and growth condition

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

characteristic: ploidy

text: healthy

characteristic: sample health state

text: Trifolium repens

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Toronto

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: white clover

text: USA

text: Albuquerque

text: field

characteristic: number of replicons

text: Trifolium repens

characteristic: organism

text: Creeping white clover

characteristic: organism common name

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

text: healthy

text: Trifolium repens


characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

text: public

text: white clover

characteristic: common name

characteristic: description

characteristic: estimated size

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Antwerp

characteristic: geographic location (region and locality)

text: field

characteristic: growth facility

characteristic: isolation and growth condition

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

characteristic: plant developmental stage

text: Field soil

characteristic: plant growth medium

text: Leaf

characteristic: plant structure

text: healthy

text: Trifolium repens


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Toronto

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: white clover

text: Australia

text: Armidale

text: field

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

characteristic: ploidy

text: healthy

characteristic: sample health state

text: Trifolium repens

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

text: public

text: white clover

characteristic: common name

characteristic: description

characteristic: estimated size

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Athens

characteristic: geographic location (region and locality)

text: field

characteristic: growth facility

characteristic: isolation and growth condition

characteristic: number of replicons

text: Trifolium repens

characteristic: organism

text: Creeping white clover

characteristic: organism common name

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

text: healthy

text: Trifolium repens


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Toronto

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: white clover

text: Colombia

text: Bogota

text: field

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

characteristic: plant developmental stage

text: Field soil

characteristic: plant growth medium

text: Leaf

characteristic: plant structure

text: healthy

text: Trifolium repens


characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

text: public

text: white clover

characteristic: common name

characteristic: description

characteristic: estimated size

text: Argentina

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: field

characteristic: growth facility

characteristic: isolation and growth condition

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

characteristic: ploidy

text: healthy

characteristic: sample health state

text: Trifolium repens

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Toronto

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: white clover

text: Canada

text: Calgary

text: field

characteristic: number of replicons

text: Trifolium repens

characteristic: organism

text: Creeping white clover

characteristic: organism common name

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

text: healthy

text: Trifolium repens


characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

text: public

text: white clover

characteristic: common name

characteristic: description

characteristic: estimated size

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Canberra

characteristic: geographic location (region and locality)

text: field

characteristic: growth facility

characteristic: isolation and growth condition

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

characteristic: plant developmental stage

text: Field soil

characteristic: plant growth medium

text: Leaf

characteristic: plant structure

text: healthy

text: Trifolium repens


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Toronto

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: white clover

text: South Africa

text: field

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

characteristic: ploidy

text: healthy

characteristic: sample health state

text: Trifolium repens

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

text: public

text: white clover

characteristic: common name

characteristic: description

characteristic: estimated size

text: New Zealand

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Christchurch

characteristic: geographic location (region and locality)

text: field

characteristic: growth facility

characteristic: isolation and growth condition

characteristic: number of replicons

text: Trifolium repens

characteristic: organism

text: Creeping white clover

characteristic: organism common name

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

text: healthy

text: Trifolium repens


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Toronto

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: white clover

text: Japan

text: Hiroshima

text: field

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

characteristic: plant developmental stage

text: Field soil

characteristic: plant growth medium

text: Leaf

characteristic: plant structure

text: healthy

text: Trifolium repens


characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

text: public

text: white clover

characteristic: common name

characteristic: description

characteristic: estimated size

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Kunming

characteristic: geographic location (region and locality)

text: field

characteristic: growth facility

characteristic: isolation and growth condition

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

characteristic: ploidy

text: healthy

characteristic: sample health state

text: Trifolium repens

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Toronto

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: white clover

text: Japan

text: Kyoto

text: field

characteristic: number of replicons

text: Trifolium repens

characteristic: organism

text: Creeping white clover

characteristic: organism common name

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

text: healthy

text: Trifolium repens


characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

text: public

text: white clover

characteristic: common name

characteristic: description

characteristic: estimated size

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Landshut

characteristic: geographic location (region and locality)

text: field

characteristic: growth facility

characteristic: isolation and growth condition

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

characteristic: plant developmental stage

text: Field soil

characteristic: plant growth medium

text: Leaf

characteristic: plant structure

text: healthy

text: Trifolium repens


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Toronto

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: white clover

text: Sweden

text: Linkoping

text: field

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

characteristic: ploidy

text: healthy

characteristic: sample health state

text: Trifolium repens

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

text: public

text: white clover

characteristic: common name

characteristic: description

characteristic: estimated size

text: Ecuador

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Loja

characteristic: geographic location (region and locality)

text: field

characteristic: growth facility

characteristic: isolation and growth condition

characteristic: number of replicons

text: Trifolium repens

characteristic: organism

text: Creeping white clover

characteristic: organism common name

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

text: healthy

text: Trifolium repens


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Toronto

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: white clover

text: Colombia

text: Medellin

text: field

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

characteristic: plant developmental stage

text: Field soil

characteristic: plant growth medium

text: Leaf

characteristic: plant structure

text: healthy

text: Trifolium repens


characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

text: public

text: white clover

characteristic: common name

characteristic: description

characteristic: estimated size

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Melbourne

characteristic: geographic location (region and locality)

text: field

characteristic: growth facility

characteristic: isolation and growth condition

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

characteristic: ploidy

text: healthy

characteristic: sample health state

text: Trifolium repens

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Toronto

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: white clover

text: USA

text: Memphis

text: field

characteristic: number of replicons

text: Trifolium repens

characteristic: organism

text: Creeping white clover

characteristic: organism common name

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

text: healthy

text: Trifolium repens


characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

text: public

text: white clover

characteristic: common name

characteristic: description

characteristic: estimated size

text: Mexico

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: field

characteristic: growth facility

characteristic: isolation and growth condition

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

characteristic: plant developmental stage

text: Field soil

characteristic: plant growth medium

text: Leaf

characteristic: plant structure

text: healthy

text: Trifolium repens


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Toronto

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: white clover

text: Germany

text: Munich

text: field

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

characteristic: ploidy

text: healthy

characteristic: sample health state

text: Trifolium repens

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

text: public

text: white clover

characteristic: common name

characteristic: description

characteristic: estimated size

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Paris

characteristic: geographic location (region and locality)

text: field

characteristic: growth facility

characteristic: isolation and growth condition

characteristic: number of replicons

text: Trifolium repens

characteristic: organism

text: Creeping white clover

characteristic: organism common name

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

text: healthy

text: Trifolium repens


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Toronto

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: white clover

text: Ecuador

text: Quito

text: field

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

characteristic: plant developmental stage

text: Field soil

characteristic: plant growth medium

text: Leaf

characteristic: plant structure

text: healthy

text: Trifolium repens


characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

text: public

text: white clover

characteristic: common name

characteristic: description

characteristic: estimated size

text: Iran

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Tehran

characteristic: geographic location (region and locality)

text: field

characteristic: growth facility

characteristic: isolation and growth condition

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

characteristic: ploidy

text: healthy

characteristic: sample health state

text: Trifolium repens

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Toronto

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: white clover

text: Greece

text: Thessaloniki

text: field

characteristic: number of replicons

text: Trifolium repens

characteristic: organism

text: Creeping white clover

characteristic: organism common name

text: Sporophyte vegetative stage

text: Field soil

text: Leaf

text: healthy

text: Trifolium repens


characteristic: ENA-FIRST-PUBLIC

text: University of Toronto

text: public

text: white clover

characteristic: common name

characteristic: description

characteristic: estimated size

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Toronto

characteristic: geographic location (region and locality)

text: field

characteristic: growth facility

characteristic: isolation and growth condition

text: Trifolium repens

text: Creeping white clover

text: Sporophyte vegetative stage

characteristic: plant developmental stage

text: Field soil

characteristic: plant growth medium

text: Leaf

characteristic: plant structure

text: healthy

text: Trifolium repens


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute for Laboratory Medicine

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Institute for Laboratory Medicine

characteristic: Submitter Id

text: human

text: Peripheral blood sample

text: Homo sapiens

text: Homo sapiens

characteristic: title


characteristic: ENA first public

text: EMBL-EBI

text: public

characteristic: collection date

text: Nanopore Adaptive Sampling targeting Streptococcus pneumoniae ATCC 706669 (Spn23F) whole chromosome (Minimap2, unselected, readfish maxchunks=4, V12 chemistry). Adaptive sampling was conducted on channels 1-256 only, channels 257-512 sequenced normally. This sample is a single FAST5 file prior to basecalling and demultiplexing.

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Culture

text: metagenome

characteristic: organism

text: metagenome

text: Nanopore Adaptive Sampling targeting Streptococcus pneumoniae ATCC 706669 (Spn23F) whole chromosome (Minimap2, unselected, maxchunks=4, V12 chemistry)


text: EMBL-EBI

text: public

text: Nanopore Adaptive Sampling targeting Streptococcus pneumoniae ATCC 706669 (Spn23F) whole chromosome (Minimap2, size-selected, readfish maxchunks=4, V12 chemistry). Adaptive sampling was conducted on channels 1-256 only, channels 257-512 sequenced normally. This sample is a single FAST5 file prior to basecalling and demultiplexing.

text: United Kingdom

text: Culture

text: metagenome

text: metagenome

text: Nanopore Adaptive Sampling targeting Streptococcus pneumoniae ATCC 706669 (Spn23F) whole chromosome (Minimap2, size-selected, maxchunks=4, V12 chemistry)


text: EMBL-EBI

text: public

text: V12_multiCBL_unselected_maxchunks_4_Minimap2

text: Nanopore Adaptive Sampling targeting multiple Streptococcus pneumoniae capsular biosynthetic loci (Minimap2, unselected, maxchunks=4, V12 chemistry). Adaptive sampling was conducted on channels 1-256 only, channels 257-512 sequenced normally. This sample is a single FAST5 file prior to basecalling and demultiplexing.

text: United Kingdom

text: Culture

text: metagenome

text: metagenome


text: EMBL-EBI

text: public

text: V12_multiCBL_selected_maxchunks_4_Minimap2

text: Nanopore Adaptive Sampling targeting multiple Streptococcus pneumoniae capsular biosynthetic loci (Minimap2, size-selected, maxchunks=4, V12 chemistry). Adaptive sampling was conducted on channels 1-256 only, channels 257-512 sequenced normally. This sample is a single FAST5 file prior to basecalling and demultiplexing.

text: United Kingdom

text: Culture

text: metagenome

text: metagenome


text: EMBL-EBI

text: public

text: Nanopore Adaptive Sampling targeting Streptococcus pneumoniae ATCC 706669 (Spn23F) whole chromosome (Minimap2, size-selected, maxchunks=0, V12 chemistry). Adaptive sampling was conducted on channels 1-256 only, channels 257-512 sequenced normally. This sample is a single FAST5 file prior to basecalling and demultiplexing.

text: United Kingdom

text: Culture

text: metagenome

text: metagenome


text: EMBL-EBI

text: public

text: Nanopore Adaptive Sampling targeting Streptococcus pneumoniae ATCC 706669 (Spn23F) 23F capsular biosynthetic locus (Minimap2, size-selected, readfish maxchunks=0, V12 chemistry). Adaptive sampling was conducted on channels 1-256 only, channels 257-512 sequenced normally. This sample is a single FAST5 file prior to basecalling and demultiplexing.

text: United Kingdom

text: Culture

text: metagenome

text: metagenome

text: Nanopore Adaptive Sampling targeting Streptococcus pneumoniae ATCC 706669 (Spn23F) 23F capsular biosynthetic locus (Minimap2, size-selected, maxchunks=0, V12 chemistry)


text: EMBL-EBI

text: public

text: V14_CBL_selected_maxchunks_0_partial_db_Minimap2

text: Nanopore Adaptive Sampling targeting Streptococcus pneumoniae ATCC 706669 (Spn23F) 23F capsular biosynthetic locus using a partial reference database (Minimap2, size-selected, readfish maxchunks=0, V14 chemistry). Adaptive sampling was conducted on channels 1-256 only, channels 257-512 sequenced normally. This sample is a single FAST5 file prior to basecalling and demultiplexing.

text: United Kingdom

text: Culture

text: metagenome

text: metagenome

text: Nanopore Adaptive Sampling targeting Streptococcus pneumoniae ATCC 706669 (Spn23F) 23F capsular biosynthetic locus using a partial reference database (Minimap2, size-selected, maxchunks=0, V14 chemistry)


text: EMBL-EBI

text: public

text: V14_CBL_selected_maxchunks_0_partial_db_graph_k19_S75

text: Nanopore Adaptive Sampling targeting Streptococcus pneumoniae ATCC 706669 (Spn23F) 23F capsular biosynthetic locus using a partial reference database (Graph k=19 S=75%, size-selected, readfish maxchunks=0, V14 chemistry). Adaptive sampling was conducted on channels 1-256 only, channels 257-512 sequenced normally. This sample is a single FAST5 file prior to basecalling and demultiplexing.

text: United Kingdom

text: Culture

text: metagenome

text: metagenome

text: Nanopore Adaptive Sampling targeting Streptococcus pneumoniae ATCC 706669 (Spn23F) 23F capsular biosynthetic locus using a partial reference database (Graph k=19 S=75%, size-selected, maxchunks=0, V14 chemistry)


text: EMBL-EBI

text: public

text: V14_CBL_selected_maxchunks_0_partial_db_graph_k19_S90

text: Nanopore Adaptive Sampling targeting Streptococcus pneumoniae ATCC 706669 (Spn23F) 23F capsular biosynthetic locus using a partial reference database (Graph k=19 S=90%, size-selected, readfish maxchunks=0, V14 chemistry). Adaptive sampling was conducted on channels 1-256 only, channels 257-512 sequenced normally. This sample is a single FAST5 file prior to basecalling and demultiplexing.

text: United Kingdom

text: Culture

text: metagenome

text: metagenome

text: Nanopore Adaptive Sampling targeting Streptococcus pneumoniae ATCC 706669 (Spn23F) 23F capsular biosynthetic locus using a partial reference database (Graph k=19 S=90%, size-selected, maxchunks=0, V14 chemistry)


text: EMBL-EBI

text: public

text: V14_CBL_selected_maxchunks_0_full_db_Minimap2

text: Nanopore Adaptive Sampling targeting Streptococcus pneumoniae ATCC 706669 (Spn23F) 23F capsular biosynthetic locus using a full reference database (Minimap2, size-selected, readfish maxchunks=0, V14 chemistry). Adaptive sampling was conducted on channels 1-256 only, channels 257-512 sequenced normally. This sample is a single FAST5 file prior to basecalling and demultiplexing.

text: United Kingdom

text: Culture

text: metagenome

text: metagenome

text: Nanopore Adaptive Sampling targeting Streptococcus pneumoniae ATCC 706669 (Spn23F) 23F capsular biosynthetic locus using a full reference database (Minimap2, size-selected, maxchunks=0, V14 chemistry)


text: EMBL-EBI

text: public

text: V14_CBL_selected_maxchunks_0_full_db_graph_k19_S75

text: Nanopore Adaptive Sampling targeting Streptococcus pneumoniae ATCC 706669 (Spn23F) 23F capsular biosynthetic locus using a full reference database (Graph k=19 S=75%, size-selected, readfish maxchunks=0, V14 chemistry). Adaptive sampling was conducted on channels 1-256 only, channels 257-512 sequenced normally. This sample is a single FAST5 file prior to basecalling and demultiplexing.

text: United Kingdom

text: Culture

text: metagenome

text: metagenome

text: Nanopore Adaptive Sampling targeting Streptococcus pneumoniae ATCC 706669 (Spn23F) 23F capsular biosynthetic locus using a full reference database (Graph k=19 S=75%, size-selected, maxchunks=0, V14 chemistry)


text: EMBL-EBI

text: public

text: V14_mixedCBL_selected_maxchunks_0_full_db_graph_k19_S75

text: Nanopore Adaptive Sampling targeting Streptococcus pneumoniae ATCC 706669 (Spn23F) 23F capsular biosynthetic locus using a full reference database in mixed culture samples (Graph k=19 S=75%, size-selected, readfish maxchunks=0, V14 chemistry). Adaptive sampling was conducted on channels 1-256 only, channels 257-512 sequenced normally. This sample is a single FAST5 file prior to basecalling and demultiplexing.

text: United Kingdom

text: Culture

text: metagenome

text: metagenome

text: Nanopore Adaptive Sampling targeting Streptococcus pneumoniae ATCC 706669 (Spn23F) 23F capsular biosynthetic locus using a full reference database in mixed culture samples (Graph k=19 S=75%, size-selected, maxchunks=0, V14 chemistry)


characteristic: Amplicon

text: mesophilic

characteristic: Condition

text: UFZ

text: public

text: reactor

text: Germany

text: uncultured prokaryote

text: uncultured prokaryote


text: thermophilic

characteristic: ENA-CHECKLIST

text: UFZ

text: public

text: reactor

text: Germany

text: uncultured prokaryote

text: uncultured prokaryote


text: UFZ

text: public

text: inoculum

text: Germany

text: uncultured prokaryote

text: uncultured prokaryote


text: mcrA

text: thermophilic

text: UFZ

text: public

text: reactor

text: Germany

text: uncultured prokaryote

text: uncultured prokaryote


text: mcrA

text: UFZ

text: public

text: inoculum

text: Germany

text: uncultured prokaryote

text: uncultured prokaryote


text: GEORG-AUGUST UNIVERSITY GOETTINGEN

text: public

text: pig

characteristic: common name

text: Denmark

text: Sus scrofa

text: Sus scrofa

text: Goettingen Minipig pool


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

text: public

text: ABOSEDE ENIOLA OLAREWAJU | AGNIESZKA KLOCH

text: UNIVERSITY OF WARSAW | UNIVERSITY OF WARSAW

characteristic: collecting institution

text: Poland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: WARSAW | UNIVERSITY OF WARSAW | WILDLIFE MOLECULAR ECOLOGY LAB

characteristic: geographic location (region and locality)

text: Gastrointestinal tract of rodents

characteristic: habitat

text: adult

characteristic: lifestage

text: Heligmosomum mixtum

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

characteristic: project name

text: Heligmosomum mixtum

text: NOT APPLICABLE

characteristic: sex

text: NOT PROVIDED

text: N

characteristic: symbiont

characteristic: tolid


characteristic: ENA first public

text: Sanger Institute

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Poland

characteristic: geographic location (country and/or sea)

text: Gastrointestinal tract of rodents

text: adult

text: Heligmosomum mixtum

characteristic: organism

text: WHOLE ORGANISM

text: ToL

text: Heligmosomum mixtum

text: MALE

text: NOT PROVIDED

text: N

characteristic: title


characteristic: ENA-CHECKLIST

text: Sanger Institute

characteristic: GAL

text: Tree of Life Programme

text: public

characteristic: collecting institution

text: Poland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Gastrointestinal tract of rodents

text: adult

text: Heligmosomum mixtum

text: WHOLE ORGANISM

characteristic: sample same as

text: Heligmosomum mixtum

text: NOT APPLICABLE

text: NOT PROVIDED

text: N


text: Sanger Institute

text: Tree of Life Programme

text: public

text: Poland

text: Gastrointestinal tract of rodents

characteristic: habitat

text: adult

characteristic: lifestage

text: Heligmosomum mixtum

text: WHOLE ORGANISM

characteristic: organism part

characteristic: project name

text: Heligmosomum mixtum

text: MALE

characteristic: sex

text: NOT PROVIDED

text: N

characteristic: symbiont

characteristic: tolid


characteristic: ENA first public

text: Respiratory Virus Unit, Microbiology Services Colindale, Public Health England

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: receipt date

text: active surveillance in response to outbreak

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Originating lab: Wales Specialist Virology Centre Sequencing lab: Pathogen Genomics Unit

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COVID-19 Genomics UK Consortium

characteristic: collecting institution

text: not provided

text: not provided

text: United Kingdom

text: Wales

characteristic: geographic location (region and locality)

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

text: not provided

characteristic: title

text: not provided


text: West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

text: public

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Scotland

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

text: not provided

text: not provided


text: Instituto Nacional de Saude Doutor Ricardo Jorge I.P. (INSA) - Portugal

characteristic: CENTER NAME

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: GISAID Accession ID

text: NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE

text: public

characteristic: TITLE

text: not provided

text: not provided

characteristic: common name

text: Portugal

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

characteristic: sample capture status


text: University of Vienna (Mollusc)

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: UNIVERSITY OF VIENNA (MOLLUSC)

characteristic: barcoding center

text: aquatic biome

characteristic: broad-scale environmental context

text: BENEDICT YUEN

text: UNIVERSITY OF VIENNA

characteristic: collecting institution

characteristic: collection date

unit: m

characteristic: depth

text: adult bivalve tissue

characteristic: environmental medium

text: Austria

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: VIENNA | UNIVERSITY OF VIENNA

characteristic: geographic location (region and locality)

text: Cymodocea nodosa meadow next to a sailing club and public beach (high anthropogenic impact), muddy highly sulphidic sediment

characteristic: habitat

text: adult

characteristic: host life stage

text: Anodontia fragilis

text: not collected

characteristic: host taxid

text: BENEDICT YUEN

text: UNIVERSITY OF VIENNA

text: marine benthic biome

characteristic: local environmental context

text: mollusc metagenome

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: SLOVENIA | PIRAN |BERNARDIN SQUARE

characteristic: original collection location

text: ASG

characteristic: project name

characteristic: sample derived from

text: mollusc metagenome

text: NOT COLLECTED

text: a3bcaeee-d0e1-431b-856f-d25b6ad219ea-asg-metagenome

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Vienna (Mollusc)

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF VIENNA (MOLLUSC)

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: BENEDICT YUEN

text: UNIVERSITY OF VIENNA

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult bivalve tissue

text: Austria

characteristic: geographic location (country and/or sea)

text: VIENNA | UNIVERSITY OF VIENNA

text: adult

text: Anodontia fragilis

characteristic: host scientific name

text: not collected

characteristic: host sex

text: BENEDICT YUEN

text: UNIVERSITY OF VIENNA

text: metagenome-assembled genome

characteristic: investigation type

text: Bivalve: Anodontia fragilis

text: marine benthic biome

text: mollusc metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Endozoicomonas sp.

text: WHOLE ORGANISM

text: SLOVENIA | PIRAN |BERNARDIN SQUARE

text: ASG

text: Endozoicomonas sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT COLLECTED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

text: GTDB-TK (version 2.3.2); GTDB (release 214)

characteristic: taxonomic classification

text: ANI

characteristic: taxonomic identity marker

text: 911a42fc-fc4e-4fd6-ae29-a9f3be991cf6-asg-MAGScoT_cleanbin_000003


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Vienna (Mollusc)

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF VIENNA (MOLLUSC)

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: BENEDICT YUEN

text: UNIVERSITY OF VIENNA

text: adult bivalve tissue

characteristic: environmental medium

text: Austria

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: VIENNA | UNIVERSITY OF VIENNA

characteristic: geographic location (region and locality)

characteristic: habitat

text: adult

characteristic: host life stage

text: Anodontia fragilis

text: not collected

characteristic: host taxid

text: BENEDICT YUEN

text: UNIVERSITY OF VIENNA

text: metagenome-assembled genome

text: Bivalve: Anodontia fragilis

text: marine benthic biome

characteristic: local environmental context

text: mollusc metagenome

text: Chlamydiia bacterium

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: SLOVENIA | PIRAN |BERNARDIN SQUARE

characteristic: original collection location

text: ASG

characteristic: project name

characteristic: sample derived from

text: Chlamydiia bacterium

text: Pacbio Sequel II

text: NOT COLLECTED

text: PROKKA (version 1.14.5)

text: taxonomic classification defined by topology and ANI

text: 070f6ad7-e26a-4e85-a640-df7038f60686-asg-MAGScoT_cleanbin_000004

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Vienna (Mollusc)

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF VIENNA (MOLLUSC)

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: BENEDICT YUEN

text: UNIVERSITY OF VIENNA

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult bivalve tissue

text: Austria

characteristic: geographic location (country and/or sea)

text: VIENNA | UNIVERSITY OF VIENNA

text: adult

text: Anodontia fragilis

characteristic: host scientific name

text: not collected

characteristic: host sex

text: BENEDICT YUEN

text: UNIVERSITY OF VIENNA

text: metagenome-assembled genome

characteristic: investigation type

text: Bivalve: Anodontia fragilis

text: marine benthic biome

text: mollusc metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Spirochaetaceae bacterium

text: WHOLE ORGANISM

text: SLOVENIA | PIRAN |BERNARDIN SQUARE

text: ASG

text: Spirochaetaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT COLLECTED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: c949225d-47b5-4e42-971c-f3484a438e1a-asg-MAGScoT_cleanbin_000001


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Vienna (Mollusc)

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: UNIVERSITY OF VIENNA (MOLLUSC)

characteristic: barcoding center

text: aquatic biome

characteristic: broad-scale environmental context

text: EKKALAK RATTANACHOT

text: Prince of Songkla University

text: adult bivalve tissue

characteristic: environmental medium

text: Thailand

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Trang | Ko Libong | Laem Yong Lam

characteristic: geographic location (region and locality)

text: Marine benthic biome

characteristic: habitat

text: adult

characteristic: host life stage

text: Pillucina vietnamica

text: not applicable

characteristic: host taxid

text: EKKALAK RATTANACHOT

text: Prince of Songkla University

text: marine benthic biome

characteristic: local environmental context

text: mollusc metagenome

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

text: Selected by hand

characteristic: sample collection device or method

characteristic: sample derived from

text: mollusc metagenome

text: baa2bd4a-2e77-43d8-8f11-6a33178e40cc-asg-metagenome

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Vienna (Mollusc)

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF VIENNA (MOLLUSC)

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); MaxBin (version 2.7)

characteristic: binning software

text: aquatic biome

text: EKKALAK RATTANACHOT

text: Prince of Songkla University

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult bivalve tissue

text: Thailand

characteristic: geographic location (country and/or sea)

text: Trang | Ko Libong | Laem Yong Lam

text: Marine benthic biome

text: adult

text: Pillucina vietnamica

characteristic: host scientific name

text: not applicable

characteristic: host sex

text: EKKALAK RATTANACHOT

text: Prince of Songkla University

text: metagenome-assembled genome

characteristic: investigation type

text: Bivalve: Pillucina vietnamica

text: marine benthic biome

text: mollusc metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Endozoicomonas sp.

text: WHOLE ORGANISM

text: ASG

text: Selected by hand

text: Endozoicomonas sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: ANI

characteristic: taxonomic identity marker

text: e67cd096-ae47-461d-8938-4a107df1e482-asg-MAGScoT_cleanbin_000003


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Vienna (Mollusc)

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF VIENNA (MOLLUSC)

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

text: aquatic biome

characteristic: broad-scale environmental context

text: EKKALAK RATTANACHOT

text: Prince of Songkla University

text: adult bivalve tissue

characteristic: environmental medium

text: Thailand

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Trang | Ko Libong | Laem Yong Lam

characteristic: geographic location (region and locality)

text: Marine benthic biome

characteristic: habitat

text: adult

characteristic: host life stage

text: Pillucina vietnamica

text: not applicable

characteristic: host taxid

text: EKKALAK RATTANACHOT

text: Prince of Songkla University

text: metagenome-assembled genome

text: Bivalve: Pillucina vietnamica

text: marine benthic biome

characteristic: local environmental context

text: mollusc metagenome

text: Candidatus Thiodiazotropha sp.

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

text: Selected by hand

characteristic: sample collection device or method

characteristic: sample derived from

text: Candidatus Thiodiazotropha sp.

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: c44e5f9e-6b63-43a9-822d-80879a7fa0b5-asg-MAGScoT_cleanbin_000001

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Vienna (Mollusc)

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF VIENNA (MOLLUSC)

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: EKKALAK RATTANACHOT

text: Prince of Songkla University

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult bivalve tissue

text: Thailand

characteristic: geographic location (country and/or sea)

text: Trang | Ko Libong | Laem Yong Lam

text: Marine benthic biome

text: adult

text: Pillucina vietnamica

characteristic: host scientific name

text: not applicable

characteristic: host sex

text: EKKALAK RATTANACHOT

text: Prince of Songkla University

text: metagenome-assembled genome

characteristic: investigation type

text: Bivalve: Pillucina vietnamica

text: marine benthic biome

text: mollusc metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Endozoicomonadaceae bacterium

text: WHOLE ORGANISM

text: ASG

text: Selected by hand

text: Endozoicomonadaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic novelty determined using RED

characteristic: taxonomic identity marker

text: 2f840806-8413-49b7-88cc-f48407a559cb-asg-MAGScoT_cleanbin_000002


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: aquatic biome

characteristic: broad-scale environmental context

text: SALLY LEYS

text: University of Alberta

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Edmonton | University of Alberta

characteristic: geographic location (region and locality)

text: freshwater culture dish

characteristic: habitat

text: juvenile

characteristic: host life stage

text: Eunapius fragilis

text: not collected

characteristic: host taxid

text: SALLY LEYS

text: University of Alberta

text: freshwater lake biome

characteristic: local environmental context

text: sponge metagenome

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: sponge metagenome

text: EuF OCL 01

text: 86dcc8c7-8877-47a3-8349-6638857782b5-asg-metagenome

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph;

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: SALLY LEYS

text: University of Alberta

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Canada

characteristic: geographic location (country and/or sea)

text: Edmonton | University of Alberta

text: freshwater culture dish

text: juvenile

text: Eunapius fragilis

characteristic: host scientific name

text: not collected

characteristic: host sex

text: SALLY LEYS

text: University of Alberta

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Eunapius fragilis

text: freshwater lake biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Rugamonas rivuli

text: WHOLE ORGANISM

text: ASG

text: Rugamonas rivuli

text: Pacbio Sequel II

characteristic: sequencing method

text: EuF OCL 01

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 4d8a0fa0-6b9e-4344-a056-cc5dee11ad2a-asg-MAGScoT_cleanbin_000013


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph;

characteristic: binning parameters

text: aquatic biome

characteristic: broad-scale environmental context

text: SALLY LEYS

text: University of Alberta

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Edmonton | University of Alberta

characteristic: geographic location (region and locality)

text: freshwater culture dish

characteristic: habitat

text: juvenile

characteristic: host life stage

text: Eunapius fragilis

text: not collected

characteristic: host taxid

text: SALLY LEYS

text: University of Alberta

text: metagenome-assembled genome

text: Sponge: Eunapius fragilis

text: freshwater lake biome

characteristic: local environmental context

text: sponge metagenome

text: Undibacterium sp.

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Undibacterium sp.

text: Pacbio Sequel II

text: EuF OCL 01

text: PROKKA (version 1.14.5)

text: 890a8081-39dd-4d7c-a8b9-cace8c1e060d-asg-MAGScoT_cleanbin_000016

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph;

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: SALLY LEYS

text: University of Alberta

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Canada

characteristic: geographic location (country and/or sea)

text: Edmonton | University of Alberta

text: freshwater culture dish

text: juvenile

text: Eunapius fragilis

characteristic: host scientific name

text: not collected

characteristic: host sex

text: SALLY LEYS

text: University of Alberta

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Eunapius fragilis

text: freshwater lake biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Janthinobacterium tructae

text: WHOLE ORGANISM

text: ASG

text: Janthinobacterium tructae

text: Pacbio Sequel II

characteristic: sequencing method

text: EuF OCL 01

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 71109635-616c-4a53-aa4a-ca08f88c8f1b-asg-MAGScoT_cleanbin_000019


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph;

characteristic: binning parameters

text: aquatic biome

characteristic: broad-scale environmental context

text: SALLY LEYS

text: University of Alberta

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Edmonton | University of Alberta

characteristic: geographic location (region and locality)

text: freshwater culture dish

characteristic: habitat

text: juvenile

characteristic: host life stage

text: Eunapius fragilis

text: not collected

characteristic: host taxid

text: SALLY LEYS

text: University of Alberta

text: metagenome-assembled genome

text: Sponge: Eunapius fragilis

text: freshwater lake biome

characteristic: local environmental context

text: sponge metagenome

text: Pedobacter sp.

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Pedobacter sp.

text: Pacbio Sequel II

text: EuF OCL 01

text: PROKKA (version 1.14.5)

text: fa0e17ee-6247-464f-8a1e-b97cd20d4797-asg-MAGScoT_cleanbin_000024

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph;

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: SALLY LEYS

text: University of Alberta

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Canada

characteristic: geographic location (country and/or sea)

text: Edmonton | University of Alberta

text: freshwater culture dish

text: juvenile

text: Eunapius fragilis

characteristic: host scientific name

text: not collected

characteristic: host sex

text: SALLY LEYS

text: University of Alberta

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Eunapius fragilis

text: freshwater lake biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Sediminibacterium sp.

text: WHOLE ORGANISM

text: ASG

text: Sediminibacterium sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: EuF OCL 01

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

text: GTDB-TK (version 2.3.2); GTDB (release 214)

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: bea26a76-da9b-4679-8a93-8655e06b4f77-asg-MAGScoT_cleanbin_000025


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph;

characteristic: binning parameters

text: aquatic biome

characteristic: broad-scale environmental context

text: SALLY LEYS

text: University of Alberta

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Edmonton | University of Alberta

characteristic: geographic location (region and locality)

text: freshwater culture dish

characteristic: habitat

text: juvenile

characteristic: host life stage

text: Eunapius fragilis

text: not collected

characteristic: host taxid

text: SALLY LEYS

text: University of Alberta

text: metagenome-assembled genome

text: Sponge: Eunapius fragilis

text: freshwater lake biome

characteristic: local environmental context

text: sponge metagenome

text: Candidatus Nanopelagicaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Candidatus Nanopelagicaceae bacterium

text: Pacbio Sequel II

text: EuF OCL 01

text: PROKKA (version 1.14.5)

text: taxonomic classification defined by topology and ANI

text: 94665c4e-465b-41c0-95d7-e038263d3e1f-asg-MAGScoT_cleanbin_000027

characteristic: title

characteristic: tolid