text: Spanish National Cancer Research Centre

text: public

text: house mouse

text: Replicate 4 of 6 months old wild type mouse

text: Mus musculus

text: Mus musculus

text: Wild Type 6 Months Replicate 4


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Spanish National Cancer Research Centre

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Spanish National Cancer Research Centre

characteristic: Submitter Id

text: house mouse

characteristic: common name

text: Replicate 1 of 3 months old Mettl1 knockout mouse

characteristic: description

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mettl1 3 Months Replicate 1

characteristic: title


text: Spanish National Cancer Research Centre

text: public

text: house mouse

text: Replicate 2 of 3 months old Mettl1 knockout mouse

text: Mus musculus

text: Mus musculus

text: Mettl1 3 Months Replicate 2


text: Spanish National Cancer Research Centre

text: public

text: house mouse

text: Replicate 3 of 3 months old Mettl1 knockout mouse

text: Mus musculus

text: Mus musculus

text: Mettl1 3 Months Replicate 3


text: Spanish National Cancer Research Centre

text: public

text: house mouse

text: Replicate 4 of 3 months old Mettl1 knockout mouse

text: Mus musculus

text: Mus musculus

text: Mettl1 3 Months Replicate 4


text: Spanish National Cancer Research Centre

text: public

text: house mouse

text: Replicate 1 of 6 months old Mettl1 knockout mouse

text: Mus musculus

text: Mus musculus

text: Mettl1 6 Months Replicate 1


text: Spanish National Cancer Research Centre

text: public

text: house mouse

text: Replicate 2 of 6 months old Mettl1 knockout mouse

text: Mus musculus

text: Mus musculus

text: Mettl1 6 Months Replicate 2


text: Spanish National Cancer Research Centre

text: public

text: house mouse

text: Replicate 3 of 6 months old Mettl1 knockout mouse

text: Mus musculus

text: Mus musculus

text: Mettl1 6 Months Replicate 3


text: Spanish National Cancer Research Centre

text: public

text: house mouse

text: Replicate 4 of 6 months old Mettl1 knockout mouse

text: Mus musculus

text: Mus musculus

text: Mettl1 6 Months Replicate 4


text: BCM-CMMR

text: public

text: CATTCAGTTATA

characteristic: barcodesequence

text: Jackson Labs

characteristic: birthplace

characteristic: cage

text: 8/16/19 11:00

text: vaginal mucus

text: Vaginal lavage day 3

text: TRUE

text: urban biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: mucus

text: mouse vaginal samples from a study to assess the influence of HMO on GBS colonization

text: BRF-II

characteristic: facility

text: USA:CA:San Diego

characteristic: geo loc name

characteristic: host age

text: reproductive system

characteristic: host body habitat

text: mucus

characteristic: host body product

text: vagina

characteristic: host body site

characteristic: host common name

text: adult

characteristic: host life stage

text: Mus musculus

characteristic: host scientific name

characteristic: host subject id

characteristic: host taxid

text: weeks

text: GT

characteristic: linker

text: GTGTGYCAGCMGCCGCGGTAA

characteristic: linker primer sequence

text: mouse metagenome

characteristic: orig name

text: FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT

characteristic: pcr primers

text: UCSDMI

characteristic: run center

characteristic: run date

text: RERUN_IBD_200_1-3_MoMi_Patras_Seed_1-3_S1_L001

characteristic: run prefix

text: mouse metagenome

text: Sequencing by synthesis

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: timepoint

text: Impact of human milk oligosaccharides on mouse vaginal microbiota

characteristic: treatment

characteristic: well id


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: CGR

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

characteristic: collection date

text: bird cherry-oat aphid

characteristic: common name

text: not provided

characteristic: geographic location (country and/or sea)

text: Rhopalosiphum padi

characteristic: organism

text: Rhopalosiphum padi

characteristic: title


text: CGR

text: public

text: not provided

text: English grain aphid

text: not provided

text: Sitobion avenae

text: Sitobion avenae


text: SIB - ETH ZURICH CBG

text: SIB

characteristic: broker name

text: Christoph Ort, Tamar Kohn, Timothy R. Julian, Lea Caduff, Seju Kang, Ayazhan Dauletova, Camille Hablützel, Rachel McLeod, Daniela Yordanova, Jolinda de Korne, Charlie Gan, Catharine Aquino, Lennart Opitz, Tim Sykes, Katharina Jahn, Pelin Burcak Icer, David Dreifuss, Ivan Topolsky, Lara Fuhrmann, Kim Philipp Jablonski, Anika John, Matteo Carrara, Franziska Singer, Chaoran Chen, Sarah Nadeau, Niko Beerenwinkel, Tanja Stadler

characteristic: collector name

text: Switzerland

text: GE

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: Genève (GE)

characteristic: name of the sampling site

text: wastewater metagenome

characteristic: population size of the catchment area

text: wastewater metagenome

text: municipal wastewater treatment plan

characteristic: sewage type

characteristic: size of the catchment area

characteristic: surveillance target

text: hCoV-19/Switzerland/GE-ETHZ-H31620230822/2023


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Greifswald, Institute of Pharmacy

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Ghana

text: Ashanti Region, Kumasi

characteristic: isolate

text: surface water

text: Enterobacter cloacae

text: not applicable

characteristic: phylogroup

text: Enterobacter cloacae

characteristic: sequence type

characteristic: strain

text: Enterobacter cloacae PBIO3828


text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Ghana

characteristic: geographic location (country and/or sea)

text: Ashanti Region, Kumasi

text: surface water

text: Enterobacter cloacae

characteristic: organism

text: not applicable

text: Enterobacter cloacae

text: Enterobacter cloacae PBIO3884

characteristic: title


text: public

text: Ghana

text: Ashanti Region, Kumasi

characteristic: geographic location (region and locality)

text: surface water

text: Enterobacter cloacae

text: not applicable

text: Enterobacter cloacae

text: Enterobacter cloacae PBIO3892


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Enterobacter cloacae

text: not applicable

text: Enterobacter cloacae

text: Enterobacter cloacae PBIO3921


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Enterobacter cloacae

text: not applicable

text: Enterobacter cloacae

text: Enterobacter cloacae PBIO3924


text: public

text: E. coli

characteristic: common name

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: C

text: Escherichia coli

text: Escherichia coli PBIO3795


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli PBIO3797


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3798


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3799


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3800


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3801


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli PBIO3802


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3803


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli PBIO3804


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3805


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: F

text: Escherichia coli

text: Escherichia coli PBIO3806


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3807


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3808


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3809


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: B1 (A)

text: Escherichia coli

text: Escherichia coli PBIO3810


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3811


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli PBIO3813


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3814


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3815


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3816


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3817


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3818


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3821


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: D

text: Escherichia coli

text: Escherichia coli PBIO3822


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3823


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli PBIO3824


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3825


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3826


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3829


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3841


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli PBIO3842


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3843


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3844


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3845


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli PBIO3846


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3847


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3848


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3849


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A (B1)

text: Escherichia coli

text: Escherichia coli PBIO3850


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: D

text: Escherichia coli

text: Escherichia coli PBIO3851


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: F

text: Escherichia coli

text: Escherichia coli PBIO3852


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: C

text: Escherichia coli

text: Escherichia coli PBIO3853


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3854


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3855


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3856


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli PBIO3857


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3858


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli PBIO3859


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: C

text: Escherichia coli

text: Escherichia coli PBIO3860


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3861


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3862


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: C

text: Escherichia coli

text: Escherichia coli PBIO3885


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli PBIO3886


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli PBIO3887


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: D

text: Escherichia coli

text: Escherichia coli PBIO3888


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3893


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli PBIO3894


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3895


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: C

text: Escherichia coli

text: Escherichia coli PBIO3896


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3897


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: D

text: Escherichia coli

text: Escherichia coli PBIO3903


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3905


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: C

text: Escherichia coli

text: Escherichia coli PBIO3906


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli PBIO3907


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: G

text: Escherichia coli

text: Escherichia coli PBIO3908


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3909


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3910


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli PBIO3911


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3912


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3913


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli PBIO3915


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: G

text: Escherichia coli

text: Escherichia coli PBIO3916


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: G

text: Escherichia coli

text: Escherichia coli PBIO3917


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli PBIO3918


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: C

text: Escherichia coli

text: Escherichia coli PBIO3928


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: C

text: Escherichia coli

text: Escherichia coli PBIO3929


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3930


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: C

text: Escherichia coli

text: Escherichia coli PBIO3931


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: C

text: Escherichia coli

text: Escherichia coli PBIO3933


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: D

text: Escherichia coli

text: Escherichia coli PBIO3934


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: C

text: Escherichia coli

text: Escherichia coli PBIO3935


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: C

text: Escherichia coli

text: Escherichia coli PBIO3936


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3937


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: A

text: Escherichia coli

text: Escherichia coli PBIO3938


text: public

text: E. coli

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Escherichia coli

text: C

text: Escherichia coli

text: Escherichia coli PBIO3939


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3796


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3819


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3820


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3827


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3831


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3832


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3833


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3834


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3835


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3836


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3837


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3838


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3840


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3889


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3890


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: not applicable

text: Klebsiella quasipneumoniae subsp. similipneumoniae PBIO3891


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3898


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3899


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3900


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3901


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3902


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3904


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3914


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3919


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3920


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3922


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3923


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3925


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: not applicable

text: Klebsiella quasipneumoniae subsp. similipneumoniae PBIO3926


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Klebsiella pneumoniae

text: not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae PBIO3927


text: public

text: Ghana

text: Ashanti Region, Kumasi

text: surface water

text: Pseudomonas aeruginosa

text: not applicable

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa PBIO3812


text: UNIVERSITY OF SZEGED

text: public

text: ena-SAMPLE-TAB-12-02-2024-18:54:03:526-10832

text: Ferric Ion amended soil suspension mixed with alkanes

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text: municipal wastewater treatment plan

characteristic: surveillance target

text: hCoV-19/Switzerland/BE-ETHZ-3220230718/2023


text: SIB - ETH ZURICH CBG

text: public

characteristic: Submitter Id

text: SIB

text: Switzerland

text: JU

text: metagenome

characteristic: investigation type

text: Porrentruy (JU)

characteristic: name of the sampling site

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/JU-ETHZ-3320230712/2023


characteristic: ENA first public

text: SIB - ETH ZURICH CBG

text: public

text: SIB

characteristic: collection date

text: Switzerland

text: ZH

text: metagenome

text: Zürich (ZH)

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/ZH-ETHZ-1020230712/2023


characteristic: ENA-CHECKLIST

text: SIB - ETH ZURICH CBG

text: public

text: SIB

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GR

text: metagenome

text: Chur (GR)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/GR-ETHZ-1720230710/2023

characteristic: title


text: SIB - ETH ZURICH CBG

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: SIB

text: Switzerland

text: LU

text: metagenome

text: Luzern (LU)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/LU-ETHZ-1820230716/2023


text: SIB - ETH ZURICH CBG

text: public

text: SIB

characteristic: broker name

text: Switzerland

text: JU

text: metagenome

text: Porrentruy (JU)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

characteristic: sewage type

text: hCoV-19/Switzerland/JU-ETHZ-3320230714/2023


text: SIB - ETH ZURICH CBG

text: public

text: SIB

text: Christoph Ort, Tamar Kohn, Timothy R. Julian, Lea Caduff, Seju Kang, Ayazhan Dauletova, Camille Hablützel, Rachel McLeod, Daniela Yordanova, Jolinda de Korne, Charlie Gan, Catharine Aquino, Lennart Opitz, Tim Sykes, Katharina Jahn, Pelin Burcak Icer, David Dreifuss, Ivan Topolsky, Lara Fuhrmann, Kim Philipp Jablonski, Anika John, Matteo Carrara, Franziska Singer, Chaoran Chen, Sarah Nadeau, Niko Beerenwinkel, Tanja Stadler

characteristic: collector name

text: Switzerland

text: SO

text: metagenome

text: Solothurn (SO)

text: wastewater metagenome

characteristic: population size of the catchment area

text: wastewater metagenome

text: municipal wastewater treatment plan

characteristic: size of the catchment area

text: hCoV-19/Switzerland/SO-ETHZ-3520230710/2023


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

text: public

characteristic: SRA accession

text: Charlotte Wright

text: Wellcome Sanger Institute

characteristic: collecting institution

text: cabbage white

characteristic: common name

text: United Kingdom

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: England | Cambridgeshire | Hinxton

characteristic: geographic location (region and locality)

text: open wooded area

characteristic: habitat

text: Charlotte Wright

text: Wellcome Sanger Institute

text: adult

characteristic: lifestage

text: Pieris rapae

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

characteristic: project name

text: Pieris rapae

text: MALE

characteristic: sex

text: N

characteristic: symbiont

characteristic: tolid


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Charlotte Wright

text: Wellcome Sanger Institute

characteristic: collection date

text: cabbage white

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England | Cambridgeshire | Hinxton

text: open wooded area

text: Charlotte Wright

text: Wellcome Sanger Institute

text: adult

text: Pieris rapae

characteristic: organism

text: HEAD

characteristic: sample derived from

text: Pieris rapae

text: MALE

text: N

characteristic: title


text: Sanger Institute

characteristic: GAL

text: Tree of Life Programme

text: public

characteristic: SRA accession

text: Charlotte Wright

text: Wellcome Sanger Institute

characteristic: collecting institution

text: cabbage white

characteristic: common name

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: England | Cambridgeshire | Hinxton

characteristic: geographic location (region and locality)

text: open wooded area

characteristic: habitat

text: Charlotte Wright

text: Wellcome Sanger Institute

text: adult

text: Pieris rapae

text: THORAX

text: Pieris rapae

text: MALE

text: N


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: Tree of Life Programme

text: public

text: Charlotte Wright

text: Wellcome Sanger Institute

text: cabbage white

text: United Kingdom

text: England | Cambridgeshire | Hinxton

text: open wooded area

text: Charlotte Wright

text: Wellcome Sanger Institute

text: adult

characteristic: lifestage

text: Pieris rapae

text: SPERM SEMINAL FLUID

characteristic: organism part

characteristic: project name

text: Pieris rapae

text: MALE

characteristic: sex

text: N

characteristic: symbiont

characteristic: tolid


text: Laboratory of Genomics and Bioinformatics, Comenius University Science Park

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Science Park of Comenius University of Bratislava

characteristic: broker name

characteristic: collection date

text: unknown

characteristic: collector name

text: Slovakia

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: unknown

characteristic: host subject id

text: RNA

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Respiratory Virus Unit, Microbiology Services Colindale, Public Health England

text: public

characteristic: SRA accession

text: COVID-19 Genomics UK Consortium

characteristic: collecting institution

text: not provided

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: receipt date

text: active surveillance in response to outbreak

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

characteristic: title

text: not provided

characteristic: virus identifier


text: Originating lab: Wales Specialist Virology Centre Sequencing lab: Pathogen Genomics Unit

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

text: public

characteristic: SRA accession

text: COVID-19 Genomics UK Consortium

characteristic: collecting institution

text: not provided

text: not provided

text: United Kingdom

text: Scotland

text: not provided

text: not provided

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

text: not provided

text: not provided


text: Harvard Medical School

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: human

characteristic: common name

characteristic: description

text: Yemen

text: Homo sapiens

text: Homo sapiens

characteristic: title


text: Nova Southeastern University

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

text: public

characteristic: Submitter Id

text: aquatic biome

characteristic: broad-scale environmental context

text: ANDREAS HEJNOL

text: UNIVERSITY OF BERGEN

characteristic: collection date

text: adult xenacoelomorph tissue

characteristic: environmental medium

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: BERGEN ANIMAL CULTURE

characteristic: geographic location (region and locality)

text: on corals in tropical waters

characteristic: habitat

text: adult

characteristic: host life stage

text: Convolutriloba macropyga

text: hermaphrodite

characteristic: host taxid

text: TOM SHANNON | JOHANNES ACHATZ

text: UNIVERSITY OF INNSBRUCK

text: tropical marine coral reef biome

characteristic: local environmental context

text: invertebrate metagenome

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: invertebrate metagenome

text: NOT PROVIDED

text: bf8da2ef-51e4-4d35-b453-0bebb92feb7c-asg-metagenome

characteristic: tolid


text: No

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Nova Southeastern University

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

text: MetaBat (version 2.15-15-gd6ea400); DASTOOL (version 1.1.5)

characteristic: binning software

text: aquatic biome

text: ANDREAS HEJNOL

text: UNIVERSITY OF BERGEN

characteristic: collecting institution

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

characteristic: contamination score

text: adult xenacoelomorph tissue

text: Norway

text: BERGEN ANIMAL CULTURE

text: on corals in tropical waters

text: adult

text: Convolutriloba macropyga

characteristic: host scientific name

text: hermaphrodite

characteristic: host sex

text: TOM SHANNON | JOHANNES ACHATZ

text: UNIVERSITY OF INNSBRUCK

text: metagenome-assembled genome

characteristic: investigation type

text: Xenacoelomorph: Convolutriloba macropyga

text: tropical marine coral reef biome

text: invertebrate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Rickettsiaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Rickettsiaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

text: GTDB-TK (version 2.3.2); GTDB (release 214)

characteristic: taxonomic classification

text: taxonomic classification defined by topology and ANI

characteristic: taxonomic identity marker

text: 97f57197-8623-4573-affb-15bfe1610b7d-asg-bin.261

characteristic: title


text: No

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Nova Southeastern University

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

text: aquatic biome

characteristic: broad-scale environmental context

text: ANDREAS HEJNOL

text: UNIVERSITY OF BERGEN

characteristic: collection date

text: adult xenacoelomorph tissue

characteristic: environmental medium

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: BERGEN ANIMAL CULTURE

characteristic: geographic location (region and locality)

text: on corals in tropical waters

characteristic: habitat

text: adult

characteristic: host life stage

text: Convolutriloba macropyga

text: hermaphrodite

characteristic: host taxid

text: TOM SHANNON | JOHANNES ACHATZ

text: UNIVERSITY OF INNSBRUCK

text: metagenome-assembled genome

text: tropical marine coral reef biome

characteristic: local environmental context

text: invertebrate metagenome

text: Rhodococcus qingshengii

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Rhodococcus qingshengii

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 8c0021bf-45bc-4a71-95bb-42b82eb10779-asg-bin.286

characteristic: tolid


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Comenius University Science Park

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: broker name

text: K pneumoniae 23/927 ST395

characteristic: description

text: Slovakia

text: Bratislavský kraj, Bratislava I

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: rectal swab

text: Klebsiella pneumoniae

characteristic: organism

text: Klebsiella pneumoniae

characteristic: title


text: Comenius University Science Park

text: public

characteristic: collection date

text: K pneumoniae 23/930 ST395

text: Slovakia

characteristic: geographic location (country and/or sea)

text: Bratislavský kraj, Bratislava II

characteristic: geographic location (region and locality)

text: diseased

text: Homo sapiens

text: central venous catether

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Comenius University Science Park

text: public

text: K pneumoniae 23/1880 ST395

text: Slovakia

text: Bratislavský kraj, Bratislava II

text: diseased

text: Homo sapiens

text: rectal swab

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: University of Vienna (Mollusc)

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

text: public

text: UNIVERSITY OF VIENNA (MOLLUSC)

characteristic: barcoding center

text: aquatic biome

characteristic: broad-scale environmental context

text: BENEDICT YUEN

text: UNIVERSITY OF VIENNA

characteristic: collecting institution

unit: m

characteristic: depth

text: adult bivalve tissue

characteristic: environmental medium

text: Austria

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: VIENNA | UNIVERSITY OF VIENNA

text: Sandy bay

characteristic: habitat

text: adult

characteristic: host life stage

text: Lucinella divaricata

text: male

characteristic: host sex

characteristic: host taxid

text: BENEDICT YUEN

text: UNIVERSITY OF VIENNA

text: marine benthic biome

characteristic: local environmental context

text: mollusc metagenome

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: ITALY | ELBA | FETOVAIA

characteristic: original collection location

text: ASG

characteristic: project name

characteristic: sample derived from

text: mollusc metagenome

text: NOT COLLECTED

text: 8b117798-209c-45f8-ab57-c957d9f12670-asg-metagenome

characteristic: tolid


text: No

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Vienna (Mollusc)

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF VIENNA (MOLLUSC)

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: BENEDICT YUEN

text: UNIVERSITY OF VIENNA

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult bivalve tissue

text: Austria

characteristic: geographic location (country and/or sea)

text: VIENNA | UNIVERSITY OF VIENNA

characteristic: geographic location (region and locality)

text: Sandy bay

text: adult

text: Lucinella divaricata

characteristic: host scientific name

text: male

text: BENEDICT YUEN

text: UNIVERSITY OF VIENNA

text: metagenome-assembled genome

characteristic: investigation type

text: Bivalve: Lucinella divaricata

text: marine benthic biome

text: mollusc metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Candidatus Thiodiazotropha sp.

characteristic: organism

text: WHOLE ORGANISM

text: ITALY | ELBA | FETOVAIA

text: ASG

text: Candidatus Thiodiazotropha sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT COLLECTED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: ANI

characteristic: taxonomic identity marker

text: 2f1738f4-af57-4207-9c16-50d088e4fe65-asg-MAGScoT_cleanbin_000001

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: SC

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SC

characteristic: broker name

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Samples prepared at Berkshire and Surrey Pathology Services Lighthouse Laboratory by Berkshire and Surrey Pathology Services Lighthouse Laboratory and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

characteristic: description

text: United Kingdom

text: England

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status


text: SC

text: public

text: SC

text: Berkshire and Surrey Pathology Services Lighthouse Laboratory

characteristic: collection date

text: not provided

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: organism

text: active surveillance in response to outbreak

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: SC

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SC

text: not provided

text: United Kingdom

text: Northern Ireland

text: Human

text: not provided

text: Human

text: not provided

text: not provided

text: not provided


text: SC

text: public

text: SC

characteristic: broker name

text: Rosalind Franklin Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Samples prepared at Rosalind Franklin Laboratory by Donald Fraser, Suki Lee, Rob Howes, The Rosalind Franklin Laboratory and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

characteristic: description

text: United Kingdom

text: England

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided


text: SIB - ETH ZURICH CBG

text: public

text: SIB

characteristic: collection date

text: Christoph Ort, Tamar Kohn, Timothy R. Julian, Lea Caduff, Seju Kang, Ayazhan Dauletova, Camille Hablützel, Rachel McLeod, Daniela Yordanova, Jolinda de Korne, Charlie Gan, Catharine Aquino, Lennart Opitz, Tim Sykes, Katharina Jahn, Pelin Burcak Icer, David Dreifuss, Ivan Topolsky, Lara Fuhrmann, Kim Philipp Jablonski, Anika John, Matteo Carrara, Franziska Singer, Chaoran Chen, Sarah Nadeau, Niko Beerenwinkel, Tanja Stadler

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GE

text: metagenome

characteristic: investigation type

text: Genève (GE)

characteristic: name of the sampling site

text: wastewater metagenome

characteristic: population size of the catchment area

text: wastewater metagenome

text: municipal wastewater treatment plan

characteristic: sewage type

characteristic: size of the catchment area

characteristic: surveillance target

text: hCoV-19/Switzerland/GE-ETHZ-G31620230822/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Warwick

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-10-12-2021-10:45:39:578-47577

tag: Namespace:University of Warwick

text: stem exension

text: continuous cropping

text: DNA extracted from 2 g soil using Qiagen soil kit

text: grassland soil (ENVO:00000106)

characteristic: environment (biome)

text: soil environment (ENVO:01001044)

characteristic: environment (feature)

text: agricultural soil (ENVO:00002259)

characteristic: environment (material)

text: United Kingdom

text: 0 - 0.15

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: total metagenome

characteristic: library type

text: soil metagenome

characteristic: organism

text: Characterisation of bacterial and viral communities associated with agricultural soils

characteristic: project name

text: soil metagenome

text: NGS (Illumina)

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: bulk soil

text: sandy loam

text: C1S_M total metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Warwick

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-10-12-2021-10:45:39:578-47578

characteristic: Submitter Id

characteristic: collection date

text: stem extension

text: continuous cropping

characteristic: description

text: grassland soil (ENVO:00000106)

text: soil environment (ENVO:01001044)

text: agricultural soil (ENVO:00002259)

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: 0 - 0.15

text: metagenome

characteristic: investigation type

text: total metagenome

text: soil metagenome

text: soil metagenome

text: NGS (Illumina)

text: soil

text: bulk soil

text: sandy loam

text: C2S_M total metagenome