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characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/GE-DIA-161349992501/2022

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SIB

characteristic: collection date

text: Lea Stauber, Christian Baumann, Miguel A Terrazos Miani, Sonja Gempeler, Loïc Borcard, Stefan Neuenschwander, Cora Sägesser, Pascal Bittel, Peter Keller, Franziska Suter-Riniker, Stephen L Leib, Alban Ramette

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-220523_os_22/2022

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: Medisupport

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Bioanalytika AG, Luzern, Switzerland

text: Switzerland

text: LU

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/LU-DIA-011450888701/2022

characteristic: organism

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SIB

characteristic: collecting institution

text: Switzerland

text: BE

text: Human

characteristic: host common name

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characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220523_os_15/2022

characteristic: isolate


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: Institute for Infectious Diseases, Bern, Switzerland

characteristic: INSDC last update

text: public

text: SIB

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-220523_os_04/2022

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: National Veterinary Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-30-05-2022-15:09:33:782-17529

tag: Namespace:National Veterinary Institute

characteristic: Submitter Id

text: Isolated from frozen, pre-cooked crayfish in dill brine imported from China. Retail.

characteristic: description

text: Sweden

text: Frozen, pre-cooked crayfish in dill brine.

characteristic: isolation source

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Newport

characteristic: serotype


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: National Veterinary Institute

characteristic: INSDC last update

text: public

text: ena-SAMPLE-TAB-30-05-2022-15:09:33:782-17530

characteristic: collection date

text: Sweden

characteristic: isolate

text: Salmonella enterica

text: Salmonella enterica

text: Newport


text: National Veterinary Institute

text: public

text: ena-SAMPLE-TAB-30-05-2022-15:09:33:783-17531

text: Sweden

characteristic: geographic location (country and/or sea)

text: Salmonella enterica

text: Salmonella enterica

text: Newport

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: National Veterinary Institute

text: public

text: ena-SAMPLE-TAB-30-05-2022-15:09:33:783-17532

text: Sweden

text: Salmonella enterica

text: Salmonella enterica

text: Newport


text: National Veterinary Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-SAMPLE-TAB-30-05-2022-15:09:33:783-17533

text: Isolated from frozen, pre-cooked crayfish in dill brine imported from China. Border control.

text: Sweden

text: Salmonella enterica

text: Salmonella enterica

text: Newport


characteristic: GISAID Accession ID

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SIB

characteristic: broker name

text: Institute for Infectious Diseases, University of Bern, Switzerland

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-220523_os_36/2022

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: SIB

characteristic: collection date

text: Lea Stauber, Christian Baumann, Miguel A Terrazos Miani, Sonja Gempeler, Loïc Borcard, Stefan Neuenschwander, Cora Sägesser, Pascal Bittel, Peter Keller, Franziska Suter-Riniker, Stephen L Leib, Alban Ramette

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220523_os_48/2022

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: BE

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220523_os_17/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Medisupport

characteristic: INSDC last update

text: public

text: SIB

text: Dianalabs SA, Rue de la coline 6, CH-1205 Genève

text: Tanguy ARAUD, Geraldine Jost, Katia Jaton, Nadia Liassine

text: Switzerland

text: GE

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-DIA-011453481301/2022

characteristic: sample capture status


characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

text: Institute for Infectious Diseases, Bern, Switzerland

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220523_os_52/2022

characteristic: isolate

characteristic: organism

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characteristic: ENA-CHECKLIST

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characteristic: INSDC last update

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characteristic: SRA accession

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text: Switzerland

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characteristic: geographic location (region and locality)

text: Human

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text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-DIA-161349993201/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

text: Medisupport

characteristic: INSDC center name

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text: public

text: SIB

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text: GE

text: Human

characteristic: host common name

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text: restricted access

characteristic: host sex

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text: hCoV-19/Switzerland/GE-DIA-161349988601/2022

characteristic: sample capture status


characteristic: ENA-CHECKLIST

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text: public

characteristic: Submitter Id

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220523_os_38/2022

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

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characteristic: broker name

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text: Switzerland

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characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220523_os_03/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

text: SIB

text: Switzerland

text: BE

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text: hCoV-19/Switzerland/BE-IFIK-220523_os_54/2022

characteristic: sample capture status


characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

characteristic: INSDC center name

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text: public

characteristic: Submitter Id

text: SIB

text: Institute for Infectious Diseases, University of Bern, Switzerland

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220523_os_71/2022

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

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characteristic: External Id

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text: public

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characteristic: SRA accession

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text: Switzerland

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text: Human

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text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220523_os_28/2022

text: Severe acute respiratory syndrome coronavirus 2


characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

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text: public

text: SIB

text: Lea Stauber, Christian Baumann, Miguel A Terrazos Miani, Sonja Gempeler, Loïc Borcard, Stefan Neuenschwander, Cora Sägesser, Pascal Bittel, Peter Keller, Franziska Suter-Riniker, Stephen L Leib, Alban Ramette

text: Switzerland

text: BE

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-220523_os_74/2022

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: Medisupport

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text: public

characteristic: Submitter Id

text: SIB

text: Bioanalytika AG, Luzern, Switzerland

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: LU

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/LU-DIA-011452070201/2022

characteristic: isolate

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characteristic: ENA-FIRST-PUBLIC

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text: public

characteristic: INSDC status

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text: Switzerland

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text: Human

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text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220523_os_55/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Medisupport

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text: public

text: SIB

text: Dianalabs SA, Rue de la coline 6, CH-1205 Genève

text: Tanguy ARAUD, Geraldine Jost, Katia Jaton, Nadia Liassine

text: Switzerland

text: GE

text: Human

characteristic: host common name

text: restricted access

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text: Homo sapiens

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text: hCoV-19/Switzerland/GE-DIA-161350000501/2022

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characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

text: Medisupport

characteristic: INSDC center name

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text: public

characteristic: Submitter Id

text: SIB

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text: Switzerland

characteristic: geographic location (country and/or sea)

text: GE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-DIA-011452891401/2022

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

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text: Institute for Infectious Diseases, Bern, Switzerland

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text: Human

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text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220523_os_23/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

text: Medisupport

characteristic: INSDC center name

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text: hCoV-19/Switzerland/GE-DIA-011452806901/2022

characteristic: sample capture status


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text: public

characteristic: Submitter Id

text: SIB

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characteristic: geographic location (country and/or sea)

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220523_os_73/2022

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: ENA-FIRST-PUBLIC

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characteristic: INSDC status

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text: Institute for Infectious Diseases, University of Bern, Switzerland

characteristic: collecting institution

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text: Switzerland

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characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220523_os_63/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

text: SIB

text: Switzerland

text: BE

text: Human

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text: Homo sapiens

characteristic: host scientific name

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characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-220523_os_59/2022

characteristic: sample capture status


characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

characteristic: INSDC center name

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text: public

characteristic: Submitter Id

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220523_os_06/2022

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

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characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SIB

characteristic: broker name

characteristic: collecting institution

text: Lea Stauber, Christian Baumann, Miguel A Terrazos Miani, Sonja Gempeler, Loïc Borcard, Stefan Neuenschwander, Cora Sägesser, Pascal Bittel, Peter Keller, Franziska Suter-Riniker, Stephen L Leib, Alban Ramette

characteristic: collector name

text: Switzerland

text: BE

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220523_os_50/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

characteristic: INSDC center name

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text: public

text: SIB

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characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-220523_os_29/2022

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: Medisupport

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text: public

characteristic: Submitter Id

text: SIB

text: Bioanalytika AG, Luzern, Switzerland

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: LU

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/LU-DIA-011452070001/2022

characteristic: isolate

characteristic: organism

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text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220523_os_39/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Medisupport

characteristic: INSDC last update

text: public

text: SIB

text: Dianalabs SA, Rue de la coline 6, CH-1205 Genève

text: Tanguy ARAUD, Geraldine Jost, Katia Jaton, Nadia Liassine

text: Switzerland

text: GE

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

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characteristic: host subject id

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characteristic: sample capture status


characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

text: Institute for Infectious Diseases, Bern, Switzerland

characteristic: INSDC center name

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characteristic: Submitter Id

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220523_os_16/2022

characteristic: isolate

characteristic: organism

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text: Human

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text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220523_os_34/2022


characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

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text: SIB

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characteristic: Submitter Id

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text: Switzerland

characteristic: geographic location (country and/or sea)

text: GE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-DIA-161350137201/2022

characteristic: isolate

characteristic: organism

characteristic: title


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characteristic: collecting institution

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text: LU

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/LU-DIA-011450888801/2022


characteristic: ENA-CHECKLIST

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characteristic: External Id

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characteristic: host sex

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text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status


characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

text: Medisupport

characteristic: INSDC center name

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characteristic: Submitter Id

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

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text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-DIA-161349960601/2022

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

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characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SIB

characteristic: broker name

characteristic: collecting institution

text: Lea Stauber, Christian Baumann, Miguel A Terrazos Miani, Sonja Gempeler, Loïc Borcard, Stefan Neuenschwander, Cora Sägesser, Pascal Bittel, Peter Keller, Franziska Suter-Riniker, Stephen L Leib, Alban Ramette

characteristic: collector name

text: Switzerland

text: BE

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-220523_os_11/2022


text: Instituto Nacional de Saude Doutor Ricardo Jorge, I.P. (INSA) and Instituto Gulbenkian de Ciencia (IGC), Portugal

characteristic: CENTER NAME

characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE

characteristic: TITLE

text: not provided

text: not provided

characteristic: common name

text: Portugal

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

characteristic: collection date

text: not provided

text: Portugal

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: title


text: Instituto Nacional de Saude Doutor Ricardo Jorge, I.P. (INSA) and Institute of Biomedicine (iBiMed), Universidade de Aveiro, Portugal

characteristic: CENTER NAME

characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: TITLE

text: not provided

characteristic: collecting institution

text: not provided

characteristic: collector name

characteristic: common name

text: Portugal

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided


text: Instituto Nacional de Saude Doutor Ricardo Jorge I.P. (INSA) - Portugal

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

text: not provided

text: Portugal

text: Human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: sample capture status


characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

text: Dutch COVID-19 response team

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:Dutch COVID-19 response team

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

characteristic: broker name

text: not provided

characteristic: collection date

text: Dutch COVID-19 response team

text: Human coronavirus 2019

text: A SARS-CoV-2 specfic multiplex PCR for Nanopore sequencing was performed, similar to amplicon-based approaches as previously described. In short, primers for 86 overlapping amplicons spanning the entire genome were designed using primal. The amplicon length was set to 500bp with 75bp overlap between the different amplicons. The libraries were generated using the native barcode kits from Nanopore (EXP-NBD104 and EXP-NBD114 and SQK-LSK109) and sequenced on a R9.4 flow cell multiplexing up to 24 samples per sequence run. Raw data was demultiplexed, amplicon primers were trimmed and human data was removed by mapping against the human reference genome.

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Zuid-Holland

characteristic: geographic location (region and locality)

text: Human

text: not collected

text: Homo sapiens

text: not provided

text: restricted access

characteristic: isolate

text: not collected

characteristic: isolation source host associated

characteristic: organism

text: Dutch COVID-19 response sample sequencing

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Dutch COVID-19 response team

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: not provided

characteristic: collecting institution

text: Dutch COVID-19 response team

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Netherlands

text: Gelderland

text: Human

characteristic: host common name

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: restricted access

text: not collected


characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

text: Dutch COVID-19 response team

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

characteristic: broker name

text: not provided

characteristic: collection date

text: Dutch COVID-19 response team

text: Human coronavirus 2019

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Utrecht

characteristic: geographic location (region and locality)

text: Human

text: not collected

text: Homo sapiens

text: not provided

characteristic: host sex

text: restricted access

characteristic: host subject id

characteristic: isolate

text: not collected

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Plant genomics and transcriptomics

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Plant genomics and transcriptomics

characteristic: Submitter Id

text: Root apexes under control nutrient solution

text: Citrus limonia

characteristic: organism

text: Citrus limonia

text: control

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: Plant genomics and transcriptomics

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Root apexes under 1433 mM aluminium

text: Citrus limonia

text: Citrus limonia

text: aluminium


text: University clinic Duesseldorf

text: public

tag: Namespace:University clinic Duesseldorf

text: ZOTZ KLIMAS MVZ Düsseldorf-Centrum GbR ÜBAG für Labormedizin, Genetik, Zytologie, Pathologie

characteristic: collecting institution

characteristic: collection date

text: not collected

characteristic: collector name

text: Germany

characteristic: geographic location (country and/or sea)

text: Northrhine Westphalia; Duesseldorf metropolitan area

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not collected

characteristic: host health state

text: homo sapien

characteristic: host scientific name

text: not collected


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Shenzhen Puensum Genetech Institute

characteristic: INSDC last update

text: public

tag: Namespace:Shenzhen Puensum Genetech Institute

text: gut metagenome of healthy female

characteristic: description

text: feces

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: China

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

characteristic: project name

text: human gut metagenome

text: Illumina NovaSeq

characteristic: sequencing method


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF TARTU

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF TARTU

characteristic: Submitter Id

characteristic: collection date

text: common dab

characteristic: common name

characteristic: lat lon

text: Limanda limanda

characteristic: organism

text: Limanda limanda

text: F

characteristic: sex

text: liver

characteristic: tissue type

characteristic: title

characteristic: weight g


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF TARTU

characteristic: INSDC last update

text: public

text: common dab

characteristic: description

text: Limanda limanda

text: Limanda limanda

text: M

text: liver


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF TARTU

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: European flounder

text: Platichthys flesus

text: Platichthys flesus

text: F

text: liver


text: UNIVERSITY OF TARTU

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: European flounder

text: Platichthys flesus

text: Platichthys flesus

text: M

text: liver


text: UNIVERSITY OF COLOGNE

text: public

tag: Namespace:UNIVERSITY OF COLOGNE

text: Germany, , Cologne

characteristic: country

characteristic: genotype

text: Homo sapiens

characteristic: host

text: Yes

characteristic: host associated

text: Escherichia coli

text: Escherichia coli

characteristic: serovar

characteristic: strain


characteristic: ENA-CHECKLIST

text: BRGM

text: public

text: Pozzolana sampled in April 2017 in the biofilter of the passive water treatment plant

text: Yes

characteristic: environmental sample

text: France

characteristic: geographic location (country and/or sea)

text: environmental sample

characteristic: isolation source

text: biofilter metagenome

characteristic: organism

text: biofilter metagenome

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BRGM

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: Pozzolana sampled in May 2017 in the biofilter of the passive water treatment plant

characteristic: description

text: Yes

text: France

text: environmental sample

text: biofilter metagenome

text: biofilter metagenome


text: BRGM

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Pozzolana sampled in June 2017 in the biofilter of the passive water treatment plant

text: Yes

text: France

text: environmental sample

text: biofilter metagenome

text: biofilter metagenome


text: BRGM

text: public

text: Pozzolana sampled in July 2017 in the biofilter of the passive water treatment plant

text: Yes

text: France

text: environmental sample

text: biofilter metagenome

text: biofilter metagenome


text: BRGM

text: public

text: Pozzolana sampled in August 2017 in the biofilter of the passive water treatment plant

text: Yes

text: France

text: environmental sample

text: biofilter metagenome

text: biofilter metagenome


text: BRGM

text: public

text: Pozzolana sampled in April 2018 in the biofilter of the passive water treatment plant

text: Yes

text: France

text: environmental sample

text: biofilter metagenome

text: biofilter metagenome


text: BRGM

text: public

text: Pozzolana sampled in May 2018 in the biofilter of the passive water treatment plant

text: Yes

text: France

text: environmental sample

text: biofilter metagenome

text: biofilter metagenome


text: BRGM

text: public

text: Pozzolana sampled in June 2018 in the biofilter of the passive water treatment plant

text: Yes

text: France

text: environmental sample

text: biofilter metagenome

text: biofilter metagenome


text: BRGM

text: public

text: Sludge sampled in April 2018 in the settling pond of the passive water treatment plant

text: Yes

text: France

text: environmental sample

text: pond metagenome

text: pond metagenome


text: BRGM

text: public

text: Sludge sampled in May 2018 in the settling pond of the passive water treatment plant

text: Yes

text: France

text: environmental sample

text: pond metagenome

text: pond metagenome


text: Health Board of Estonia

text: public

text: ena-upload-cli v0.6.0 @ Galaxy

tag: Namespace:Health Board of Estonia

text: The Health Board of Estonia

characteristic: collecting institution

characteristic: collection date

text: Aare Abroi, Radko Avi, Taavi Päll, Heiki Niglas , Merit Pauskar, Arina Shablinskaja, Eveli Kallas, Andrio Lahesaare, Kai Truusalu, Dagmar Hoidmets, Olga Sadikova, Kaspar Ratnik, Hanna Sepp, Liidia Dotsenko, Jevgenia Epštein, Heleene Suija, Katrin Kaarna, Lili Milani, Mait Metspalu, Ott Eric Oopkaup, Ivar Koppel, Erik Jaaniso, Ivan Kuzmin, Uku Raudvere, Tuuli Reisberg, Hedi Peterson, Ulvi Gerst Talas, Paul Naaber, Mari-Anne Härma, Irja Lutsar, Kristi Huik, Heleri Inno

characteristic: collector name

text: Nasopharyngeal/oropharyngeal swab from Estonian Covid-19 patient

text: Estonia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Western Estonia

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance not initiated by an outbreak

characteristic: sample capture status

text: PCR tiled amplicon WGS of SARS-Cov-2, pre-selected subset from active surveillance


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Health Board of Estonia

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli v0.6.0 @ Galaxy

text: The Health Board of Estonia

characteristic: description

text: Estonia

characteristic: geographic location (country and/or sea)

text: Northern Estonia

text: human

text: not provided

text: Homo sapiens

text: female

characteristic: organism

characteristic: title


text: Health Board of Estonia

text: public

characteristic: SRA accession

text: ena-upload-cli v0.6.0 @ Galaxy

characteristic: Submitter Id

text: The Health Board of Estonia

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Estonia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Northern Estonia

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Health Board of Estonia

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli v0.6.0 @ Galaxy

text: The Health Board of Estonia

text: Estonia

text: Western Estonia

text: human

text: not provided

text: Homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

characteristic: isolate

characteristic: sample capture status


text: Health Board of Estonia

text: public

characteristic: SRA accession

text: ena-upload-cli v0.6.0 @ Galaxy

characteristic: Submitter Id

text: The Health Board of Estonia

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

characteristic: description

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Central Estonia

characteristic: geographic location (region and locality)

text: human

text: not provided

text: Homo sapiens

text: male

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Health Board of Estonia

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli v0.6.0 @ Galaxy

text: The Health Board of Estonia

text: Estonia

text: Southern Estonia

characteristic: host age

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female


text: Health Board of Estonia

text: public

characteristic: SRA accession

text: ena-upload-cli v0.6.0 @ Galaxy

characteristic: Submitter Id

text: The Health Board of Estonia

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

characteristic: description

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Central Estonia

text: human

text: not provided

text: Homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

characteristic: isolate

characteristic: sample capture status