COG-UK/NORT-YYUCFD

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUCFD

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/NORT-YYUCFD

characteristic: title

text: not provided

characteristic: virus identifier


status: PUBLIC

tag: attribute

text: public

tag: Namespace:Northumbria University / South Tees Hospitals NHS Foundation Trust / North Cumbria Integrated Care NHS Foundation Trust / North Tees and Hartlepool NHS Foundation Trust / Newcastle Hospitals NHS Foundation Trust

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: receipt date

text: active surveillance in response to outbreak

characteristic: sample capture status

text: not provided

text: not provided


COG-UK/NORT-YYTUYK

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Northumbria University / South Tees Hospitals NHS Foundation Trust / North Cumbria Integrated Care NHS Foundation Trust / North Tees and Hartlepool NHS Foundation Trust / Newcastle Hospitals NHS Foundation Trust

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYTUYK

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/NORT-YYTUYK

characteristic: title

text: not provided

characteristic: virus identifier


COG-UK/NORT-YYUQIY

text: public

text: COG-UK/NORT-YYUQIY

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: COG-UK/NORT-YYUQIY

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: not provided


COG-UK/NORT-YYUKFF

text: public

text: COG-UK/NORT-YYUKFF

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/NORT-YYUKFF

characteristic: title

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Quadram Institute Bioscience

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Quadram Institute Bioscience

text: COVID-19 Genomics UK Consortium

text: Quadram Institute Bioscience

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: not provided


COG-UK/NORT-YYUMHI

text: public

text: COG-UK/NORT-YYUMHI

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: COG-UK/NORT-YYUMHI

text: not provided


COG-UK/NORT-YYUBYA

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUBYA

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/NORT-YYUBYA

characteristic: title

text: not provided

characteristic: virus identifier


COG-UK/NORT-YYUYTS

text: public

text: COG-UK/NORT-YYUYTS

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: COG-UK/NORT-YYUYTS

text: not provided


COG-UK/NORT-YYUPHU

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUPHU

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: COG-UK/NORT-YYUPHU

text: not provided


COG-UK/NORT-YYUFNO

text: public

text: COG-UK/NORT-YYUFNO

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/NORT-YYUFNO

characteristic: title

text: not provided

characteristic: virus identifier


COG-UK/NORT-YYUBWX

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUBWX

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: COG-UK/NORT-YYUBWX

text: not provided


COG-UK/NORT-YYUMWF

text: public

text: COG-UK/NORT-YYUMWF

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: COG-UK/NORT-YYUMWF

text: not provided


COG-UK/NORT-YYUNDT

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUNDT

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/NORT-YYUNDT

characteristic: title

text: not provided

characteristic: virus identifier


COG-UK/NORT-YYUAFZ

text: public

text: COG-UK/NORT-YYUAFZ

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: COG-UK/NORT-YYUAFZ

text: not provided


COG-UK/NORT-YYUNIC

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUNIC

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: COG-UK/NORT-YYUNIC

text: not provided


COG-UK/NORT-YYUXKS

text: public

text: COG-UK/NORT-YYUXKS

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/NORT-YYUXKS

characteristic: title

text: not provided

characteristic: virus identifier


COG-UK/NORT-YYUAGI

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUAGI

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: COG-UK/NORT-YYUAGI

text: not provided


COG-UK/NORT-YYUTDN

text: public

text: COG-UK/NORT-YYUTDN

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: COG-UK/NORT-YYUTDN

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

characteristic: title

text: not provided

characteristic: virus identifier


COG-UK/NORT-YYUXDR

text: public

text: COG-UK/NORT-YYUXDR

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: COG-UK/NORT-YYUXDR

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: not provided


COG-UK/NORT-YYUSCM

text: public

text: COG-UK/NORT-YYUSCM

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/NORT-YYUSCM

characteristic: title

text: not provided

characteristic: virus identifier


COG-UK/NORT-YYUFXS

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUFXS

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: COG-UK/NORT-YYUFXS

text: not provided


COG-UK/NORT-YYUQXP

text: public

text: COG-UK/NORT-YYUQXP

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: COG-UK/NORT-YYUQXP

text: not provided


COG-UK/NORT-YYURBU

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYURBU

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/NORT-YYURBU

characteristic: title

text: not provided

characteristic: virus identifier


COG-UK/NORT-YYUQKZ

text: public

text: COG-UK/NORT-YYUQKZ

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: COG-UK/NORT-YYUQKZ

text: not provided


COG-UK/NORT-YYUEUK

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUEUK

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: COG-UK/NORT-YYUEUK

text: not provided


COG-UK/NORT-YYUQTE

text: public

text: COG-UK/NORT-YYUQTE

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/NORT-YYUQTE

characteristic: title

text: not provided

characteristic: virus identifier


COG-UK/NORT-YYUAKP

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUAKP

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: COG-UK/NORT-YYUAKP

text: not provided


COG-UK/NORT-YYUBZJ

text: public

text: COG-UK/NORT-YYUBZJ

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: COG-UK/NORT-YYUBZJ

text: not provided


COG-UK/NORT-YYUEDM

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUEDM

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/NORT-YYUEDM

characteristic: title

text: not provided

characteristic: virus identifier


COG-UK/NORT-YYUXHT

text: public

text: COG-UK/NORT-YYUXHT

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: COG-UK/NORT-YYUXHT

text: not provided


COG-UK/NORT-YYUCHW

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUCHW

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: COG-UK/NORT-YYUCHW

text: not provided


COG-UK/NORT-YYUKGD

text: public

text: COG-UK/NORT-YYUKGD

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/NORT-YYUKGD

characteristic: title

text: not provided

characteristic: virus identifier


COG-UK/NORT-YYUYHY

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUYHY

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: COG-UK/NORT-YYUYHY

text: not provided


COG-UK/NORT-YYUTCO

text: public

text: COG-UK/NORT-YYUTCO

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: COG-UK/NORT-YYUTCO

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Quadram Institute Bioscience

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COVID-19 Genomics UK Consortium

text: Quadram Institute Bioscience

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

characteristic: title

text: not provided

characteristic: virus identifier


COG-UK/NORT-YYUEXU

text: public

text: COG-UK/NORT-YYUEXU

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: COG-UK/NORT-YYUEXU

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: not provided


COG-UK/NORT-YYURIK

text: public

text: COG-UK/NORT-YYURIK

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/NORT-YYURIK

characteristic: title

text: not provided

characteristic: virus identifier


COG-UK/NORT-YYUJTP

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUJTP

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: COG-UK/NORT-YYUJTP

text: not provided


COG-UK/NORT-YYUKWG

text: public

text: COG-UK/NORT-YYUKWG

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: COG-UK/NORT-YYUKWG

text: not provided


COG-UK/NORT-YYUBEE

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUBEE

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/NORT-YYUBEE

characteristic: title

text: not provided

characteristic: virus identifier


COG-UK/NORT-YYUSPJ

text: public

text: COG-UK/NORT-YYUSPJ

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: COG-UK/NORT-YYUSPJ

text: not provided


COG-UK/NORT-YYUTBG

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUTBG

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: COG-UK/NORT-YYUTBG

text: not provided


COG-UK/NORT-YYUIBN

text: public

text: COG-UK/NORT-YYUIBN

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/NORT-YYUIBN

characteristic: title

text: not provided

characteristic: virus identifier


COG-UK/NORT-YYUIEW

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUIEW

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: COG-UK/NORT-YYUIEW

text: not provided


COG-UK/NORT-YYUKIR

text: public

text: COG-UK/NORT-YYUKIR

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: COG-UK/NORT-YYUKIR

text: not provided


COG-UK/NORT-YYURUQ

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYURUQ

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/NORT-YYURUQ

characteristic: title

text: not provided

characteristic: virus identifier


text: public

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: not provided


COG-UK/NORT-YYUMTM

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUMTM

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: COG-UK/NORT-YYUMTM

text: not provided


COG-UK/NORT-YYUDKN

text: public

text: COG-UK/NORT-YYUDKN

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/NORT-YYUDKN

characteristic: title

text: not provided

characteristic: virus identifier


COG-UK/NORT-YYURXZ

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYURXZ

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: COG-UK/NORT-YYURXZ

text: not provided


COG-UK/NORT-YYUWEI

text: public

text: COG-UK/NORT-YYUWEI

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: COG-UK/NORT-YYUWEI

text: not provided


COG-UK/NORT-YYUFIJ

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUFIJ

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/NORT-YYUFIJ

characteristic: title

text: not provided

characteristic: virus identifier


text: public

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: not provided


COG-UK/NORT-YYUTGH

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUTGH

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: COG-UK/NORT-YYUTGH

text: not provided


COG-UK/NORT-YYUDRQ

text: public

text: COG-UK/NORT-YYUDRQ

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/NORT-YYUDRQ

characteristic: title

text: not provided

characteristic: virus identifier


COG-UK/NORT-YYUNGM

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUNGM

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: COG-UK/NORT-YYUNGM

text: not provided


text: Quadram Institute Bioscience

text: public

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

text: Quadram Institute Bioscience

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: not provided


COG-UK/NORT-YYUEHA

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUEHA

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/NORT-YYUEHA

characteristic: title

text: not provided

characteristic: virus identifier


COG-UK/NORT-YYUWMX

text: public

text: COG-UK/NORT-YYUWMX

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: COG-UK/NORT-YYUWMX

text: not provided


COG-UK/NORT-YYUJIF

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUJIF

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: COG-UK/NORT-YYUJIF

text: not provided


COG-UK/NORT-YYUEWE

text: public

text: COG-UK/NORT-YYUEWE

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/NORT-YYUEWE

characteristic: title

text: not provided

characteristic: virus identifier


COG-UK/NORT-YYUMOP

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUMOP

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: COG-UK/NORT-YYUMOP

text: not provided


COG-UK/NORT-YYUDGK

text: public

text: COG-UK/NORT-YYUDGK

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: COG-UK/NORT-YYUDGK

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

characteristic: title

text: not provided

characteristic: virus identifier


COG-UK/NORT-YYUINY

text: public

text: COG-UK/NORT-YYUINY

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: COG-UK/NORT-YYUINY

text: not provided


COG-UK/NORT-YYUAJX

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/NORT-YYUAJX

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

text: COG-UK/NORT-YYUAJX

text: not provided


characteristic: ENA first public

text: Emory University

text: public

characteristic: Submitter Id

characteristic: collection date

text: house mouse

characteristic: common name

text: Stool in a claudin-2 knockout mouse at baseline

characteristic: description

text: USA

characteristic: geographic location (country and/or sea)

text: Mus musculus

text: Mus musculus

characteristic: title


characteristic: ENA-CHECKLIST

text: Emory University

text: public

text: house mouse

text: Stool in a wildp-type mouse at baseline

text: USA

text: Mus musculus

text: Mus musculus


text: Emory University

characteristic: INSDC center name

text: public

text: house mouse

text: Stool in a claudin-2 knockout mouse 24 h after cecal ligation&puncture surgery

text: USA

text: Mus musculus

text: Mus musculus


text: Emory University

text: public

text: house mouse

text: Stool in a wild-type mouse 24 h after cecal ligation&puncture surgery

text: USA

text: Mus musculus

text: Mus musculus


text: Medical University of Vienna

text: public

unit: week

characteristic: age

text: ArrayExpress

characteristic: broker name

text: not collected

text: house mouse

text: Protocols: Animal experiments were performed in accordance to the approval by the Austrian Federal Ministry of Education, Science and Research (BMBWF-V/3b/2020-0.398.007). The organs of Mus musculus C57BL/6J were collected after acquiring the study measurements and following euthanasia under anesthesia between mid-May and mid-June 2021, and stored at -80°C prior to RNA extraction.  Fibrosis was induced by the administration of carbon tetrachloride (CCl4) or thioacetamide (TAA). CCl4 was gavaged as a 20% v/v solution in olive oil at a dose of 2 mL/kg body weight three times a week. TAA was injected intraperitoneally in 0.9% saline at a dose of 150 mg/kg thrice a week. The dose was gradually increased over the first week for CCl4 administration and over the first two weeks for TAA administration. The total time of fibrosis induction was 12 weeks, followed by one or two weeks of regression.  Each sample represents total RNA from murine liver, extracted using QIAGEN RNA Easy Mini Kit, and stored in -80°C prior to submission. The library preparation was done with a TruSeq Stranded mRNA LT sample preparation kit (Illumina, CA, USA).

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: individual

text: control (olive oil)

characteristic: injury

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: liver

characteristic: organism part

characteristic: sample group

text: Mus musculus

text: male

characteristic: sex

characteristic: strain


characteristic: ENA first public

text: Medical University of Vienna

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: liver fibrosis

text: wild type genotype

text: not collected

text: CCL4-induced liver injury

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: liver

text: Mus musculus

text: male


characteristic: ENA-CHECKLIST

text: Medical University of Vienna

characteristic: INSDC center name

text: public

characteristic: age

text: ArrayExpress

characteristic: broker name

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: control (saline)

text: not applicable

text: Mus musculus

text: Mus musculus

text: liver

text: Mus musculus

text: male

characteristic: title


text: Medical University of Vienna

text: public

text: ArrayExpress

text: not collected

text: house mouse

text: adult

text: liver fibrosis

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: individual

text: TAA-induced liver injury

characteristic: injury

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: liver

characteristic: organism part

characteristic: sample group

text: Mus musculus

text: male

characteristic: sex

characteristic: strain


characteristic: ENA first public

text: Laboratory of Genomics and Bioinformatics, Comenius University Science Park

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Science Park of Comenius University of Bratislava

characteristic: collecting institution

characteristic: collection date

text: unknown

characteristic: collector name

text: Slovakia

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: unknown

characteristic: host subject id

text: RNA

characteristic: organism


characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

text: aquatic biome

characteristic: broad-scale environmental context

text: GERT WÖRHEIDE

text: LMU Munich

unit: m

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Munich | LMU Munich

characteristic: geographic location (region and locality)

text: Aquarium

characteristic: habitat

text: adult

characteristic: host life stage

text: Collospongia auris

text: not applicable

characteristic: host taxid

text: GERT WÖRHEIDE

text: LMU Munich

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

text: unknown

characteristic: relationship

characteristic: sample derived from

text: sponge metagenome

text: bbc4e388-f33c-4760-a617-b70042db4ff6-asg-metagenome

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

text: MetaBat (version 2.15-15-gd6ea400); DASTOOL (version 1.1.5)

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: GERT WÖRHEIDE

text: LMU Munich

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Germany

text: Munich | LMU Munich

text: Aquarium

text: adult

text: Collospongia auris

characteristic: host scientific name

text: not applicable

characteristic: host sex

text: GERT WÖRHEIDE

text: LMU Munich

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Collospongia auris

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Synechococcus sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: unknown

text: uncultured Synechococcus sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

text: GTDB-TK (version 2.3.2); GTDB (release 214)

characteristic: taxonomic classification

text: taxonomic classification defined by topology and ANI

characteristic: taxonomic identity marker

text: fd3f815a-8372-41ea-98ec-47c751c763dc-asg-bin.11


text: No

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: GERT WÖRHEIDE

text: LMU Munich

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Munich | LMU Munich

characteristic: geographic location (region and locality)

text: Aquarium

characteristic: habitat

text: adult

characteristic: host life stage

text: Collospongia auris

text: not applicable

characteristic: host taxid

text: GERT WÖRHEIDE

text: LMU Munich

text: metagenome-assembled genome

text: Sponge: Collospongia auris

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: Rhodospirillales bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

text: unknown

characteristic: relationship

characteristic: sample derived from

text: Rhodospirillales bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: 7890173f-0db8-4521-a616-8ec1370aef65-asg-bin.15

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: GERT WÖRHEIDE

text: LMU Munich

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Germany

text: Munich | LMU Munich

text: Aquarium

text: adult

text: Collospongia auris

characteristic: host scientific name

text: not applicable

characteristic: host sex

text: GERT WÖRHEIDE

text: LMU Munich

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Collospongia auris

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Aestuariivita sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: unknown

text: Aestuariivita sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 3a144a4e-e4b2-4a63-8bc0-91e45eae00e7-asg-bin.17


text: No

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: GERT WÖRHEIDE

text: LMU Munich

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Munich | LMU Munich

characteristic: geographic location (region and locality)

text: Aquarium

characteristic: habitat

text: adult

characteristic: host life stage

text: Collospongia auris

text: not applicable

characteristic: host taxid

text: GERT WÖRHEIDE

text: LMU Munich

text: metagenome-assembled genome

text: Sponge: Collospongia auris

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: Alphaproteobacteria bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

text: unknown

characteristic: relationship

characteristic: sample derived from

text: Alphaproteobacteria bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: 901dc05a-7fc4-4786-a414-36ca583dcb04-asg-bin.25

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: GERT WÖRHEIDE

text: LMU Munich

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Germany

text: Munich | LMU Munich

text: Aquarium

text: adult

text: Collospongia auris

characteristic: host scientific name

text: not applicable

characteristic: host sex

text: GERT WÖRHEIDE

text: LMU Munich

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Collospongia auris

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Bryobacterales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: unknown

text: Bryobacterales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 224d53f7-2891-4181-b3b6-dfc838e75a30-asg-bin.31


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: GERT WÖRHEIDE

text: LMU Munich

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Munich | LMU Munich

characteristic: geographic location (region and locality)

text: Aquarium

characteristic: habitat

text: adult

characteristic: host life stage

text: Collospongia auris

text: not applicable

characteristic: host taxid

text: GERT WÖRHEIDE

text: LMU Munich

text: metagenome-assembled genome

text: Sponge: Collospongia auris

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: Gammaproteobacteria bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

text: unknown

characteristic: relationship

characteristic: sample derived from

text: Gammaproteobacteria bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: 7dda4b05-a23e-4167-9b8c-72aa0103326d-asg-bin.47

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: GERT WÖRHEIDE

text: LMU Munich

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Germany

text: Munich | LMU Munich

text: Aquarium

text: adult

text: Collospongia auris

characteristic: host scientific name

text: not applicable

characteristic: host sex

text: GERT WÖRHEIDE

text: LMU Munich

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Collospongia auris

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Gammaproteobacteria bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: unknown

text: Gammaproteobacteria bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: b7323c40-1def-4648-9e80-026e239d62bc-asg-bin.75


text: No

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: GERT WÖRHEIDE

text: LMU Munich

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Munich | LMU Munich

characteristic: geographic location (region and locality)

text: Aquarium

characteristic: habitat

text: adult

characteristic: host life stage

text: Collospongia auris

text: not applicable

characteristic: host taxid

text: GERT WÖRHEIDE

text: LMU Munich

text: metagenome-assembled genome

text: Sponge: Collospongia auris

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: Pseudomonadales bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

text: unknown

characteristic: relationship

characteristic: sample derived from

text: Pseudomonadales bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: 5b7ec7a3-ee4e-4ba4-add3-f9695703f054-asg-bin.79

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: GERT WÖRHEIDE

text: LMU Munich

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Germany

text: Munich | LMU Munich

text: Aquarium

text: adult

text: Collospongia auris

characteristic: host scientific name

text: not applicable

characteristic: host sex

text: GERT WÖRHEIDE

text: LMU Munich

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Collospongia auris

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Alphaproteobacteria bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: unknown

text: Alphaproteobacteria bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic novelty determined using RED

characteristic: taxonomic identity marker

text: c0475bb8-bacb-41e6-a713-f753fa7a2a41-asg-bin.82


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: GERT WÖRHEIDE

text: LMU Munich

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Munich | LMU Munich

characteristic: geographic location (region and locality)

text: Aquarium

characteristic: habitat

text: adult

characteristic: host life stage

text: Collospongia auris

text: not applicable

characteristic: host taxid

text: GERT WÖRHEIDE

text: LMU Munich

text: metagenome-assembled genome

text: Sponge: Collospongia auris

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: Alphaproteobacteria bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

text: unknown

characteristic: relationship

characteristic: sample derived from

text: Alphaproteobacteria bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: 0163408a-7666-44a5-80df-7a72c4f094cc-asg-bin.83

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: GERT WÖRHEIDE

text: LMU Munich

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Germany

text: Munich | LMU Munich

text: Aquarium

text: adult

text: Collospongia auris

characteristic: host scientific name

text: not applicable

characteristic: host sex

text: GERT WÖRHEIDE

text: LMU Munich

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Collospongia auris

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Pseudomonadales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: unknown

text: Pseudomonadales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 5d93cbb4-9b2a-4d82-849c-8db6f4b91777-asg-bin.101


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: GERT WÖRHEIDE

text: LMU Munich

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Munich | LMU Munich

characteristic: geographic location (region and locality)

text: Aquarium

characteristic: habitat

text: adult

characteristic: host life stage

text: Collospongia auris

text: not applicable

characteristic: host taxid

text: GERT WÖRHEIDE

text: LMU Munich

text: metagenome-assembled genome

text: Sponge: Collospongia auris

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: Arenicellales bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

text: unknown

characteristic: relationship

characteristic: sample derived from

text: Arenicellales bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: 2bc81a4a-70f0-4651-b542-e07c7ba8b5a8-asg-bin.104

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

text: MetaBat (version 2.15-15-gd6ea400); DASTOOL (version 1.1.5)

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: GERT WÖRHEIDE

text: LMU Munich

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Germany

text: Munich | LMU Munich

text: Aquarium

text: adult

text: Collospongia auris

characteristic: host scientific name

text: not applicable

characteristic: host sex

text: GERT WÖRHEIDE

text: LMU Munich

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Collospongia auris

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Arenicellales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: unknown

text: Arenicellales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 1c638793-a7dd-4b26-ae47-8b373df82f5b-asg-bin.106


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: GERT WÖRHEIDE

text: LMU Munich

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Munich | LMU Munich

characteristic: geographic location (region and locality)

text: Aquarium

characteristic: habitat

text: adult

characteristic: host life stage

text: Collospongia auris

text: not applicable

characteristic: host taxid

text: GERT WÖRHEIDE

text: LMU Munich

text: metagenome-assembled genome

text: Sponge: Collospongia auris

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: uncultured candidatus Porisulfidus sp.

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

text: unknown

characteristic: relationship

characteristic: sample derived from

text: uncultured candidatus Porisulfidus sp.

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: GTDB-TK (version 2.3.2); GTDB (release 214)

text: d44410dd-c181-48df-95fb-d4a73cfd76fe-asg-bin.107

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: GERT WÖRHEIDE

text: LMU Munich

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Germany

text: Munich | LMU Munich

text: Aquarium

text: adult

text: Collospongia auris

characteristic: host scientific name

text: not applicable

characteristic: host sex

text: GERT WÖRHEIDE

text: LMU Munich

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Collospongia auris

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Flavobacteriaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: unknown

text: Flavobacteriaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic classification defined by topology and ANI

characteristic: taxonomic identity marker

text: a3e7536b-aef7-40f9-ba70-61464de0ee72-asg-bin.10


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: GERT WÖRHEIDE

text: LMU Munich

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Munich | LMU Munich

characteristic: geographic location (region and locality)

text: Aquarium

characteristic: habitat

text: adult

characteristic: host life stage

text: Collospongia auris

text: not applicable

characteristic: host taxid

text: GERT WÖRHEIDE

text: LMU Munich

text: metagenome-assembled genome

text: Sponge: Collospongia auris

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: Alphaproteobacteria bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

text: unknown

characteristic: relationship

characteristic: sample derived from

text: Alphaproteobacteria bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: a9408646-f772-450b-a812-67b6866c028a-asg-bin.12

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: GERT WÖRHEIDE

text: LMU Munich

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Germany

text: Munich | LMU Munich

text: Aquarium

text: adult

text: Collospongia auris

characteristic: host scientific name

text: not applicable

characteristic: host sex

text: GERT WÖRHEIDE

text: LMU Munich

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Collospongia auris

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Gammaproteobacteria bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: unknown

text: Gammaproteobacteria bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic novelty determined using RED

characteristic: taxonomic identity marker

text: 7018d805-9e79-4280-bfa5-16e89684b7f5-asg-bin.14


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: GERT WÖRHEIDE

text: LMU Munich

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Munich | LMU Munich

characteristic: geographic location (region and locality)

text: Aquarium

characteristic: habitat

text: adult

characteristic: host life stage

text: Collospongia auris

text: not applicable

characteristic: host taxid

text: GERT WÖRHEIDE

text: LMU Munich

text: metagenome-assembled genome

text: Sponge: Collospongia auris

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: Rhodothermales bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

text: unknown

characteristic: relationship

characteristic: sample derived from

text: Rhodothermales bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: ANI

text: dd21fc70-f894-4160-8ddc-9308bdc5b0cc-asg-bin.1

characteristic: title

characteristic: tolid