text: Berlin Institute for Medical Systems Biology (BIMSB) Max Delbruck Center for Molecular Medicine

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10902_2:PCN_mRNA_shElavl234_Neurite_3

text: ArrayExpress

text: neuron of cerebral cortex

text: neuron projection

text: house mouse

text: neonate

text: normal

text: wild type genotype

text: 4 to 8 individuals from litter8

characteristic: individual

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

text: mRNA

characteristic: protocol

text: Mus musculus

text: mixed

characteristic: sex

characteristic: strain


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-10902_2:PCN_mRNA_shElavl234_Soma_1

tag: Namespace:Berlin Institute for Medical Systems Biology (BIMSB) Max Delbruck Center for Molecular Medicine

characteristic: Submitter Id

unit: day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: neuron of cerebral cortex

characteristic: cell type

text: neuronal cell body

characteristic: cellular component

text: house mouse

characteristic: common name

text: Protocols: Soma (neuronal cell body) samples were collected from top of the filter membrane and neurite (neuron projection) samples frpm the cleaned membranes at DIV9. See also: “Ludwik et al. 2019: Genome-wide analysis of RNA and protein localization and local translation in mESC-derived neurons” Cortical neurons were isolated from E14 and P0 pups and plated on microporous membranes in 6-well plates. Astrocytes were pre-seeded on the 6-well dishes around one week in advance of plating. Cells were cultured as previously described (Kaech & Banker, 2006). Neurons were transfected using lentiviral particles carrying either shRNA expression constructs or GFP constructs with inserts from one of the reporter library pools. Viral particles were applied onto the neurons between DIV1 and DIV5. After collection samples were immediately transferred into Trizol and RNA extraction was performed according to manufacturer’s instructions (see also Ludwik et al. 2019). 100 ng of total RNA from each sample were used for libraries preparation with either TruSeq stranded mRNA library preparation kit (Illumina 2002059), Truseq Stranded Total RNA Library kit (Illumina, 15032619) or SMART smRNaseq kit (Takara, 635029) according to the manufacturer’s recommendations.

characteristic: description

text: neonate

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: 4 to 8 individuals from litter8

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: mRNA

text: Mus musculus

text: mixed

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10902_2:PCN_mRNA_shElavl234_Soma_2

text: ArrayExpress

text: neuron of cerebral cortex

text: neuronal cell body

text: house mouse

text: neonate

text: normal

text: wild type genotype

text: 4 to 8 individuals from litter8

characteristic: individual

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

text: mRNA

characteristic: protocol

text: Mus musculus

text: mixed

characteristic: sex

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-10902_2:PCN_mRNA_shElavl234_Soma_3

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: neuron of cerebral cortex

characteristic: cell type

text: neuronal cell body

characteristic: cellular component

text: house mouse

characteristic: common name

text: neonate

text: normal

text: wild type genotype

text: 4 to 8 individuals from litter8

text: Mus musculus

text: Mus musculus

text: brain

text: mRNA

text: Mus musculus

text: mixed


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-10902_2:PCN_mRNA_shHbs1l_Neurite_1

text: ArrayExpress

text: neuron of cerebral cortex

text: neuron projection

text: house mouse

characteristic: description

text: neonate

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: 4 to 8 individuals from litter10

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: mRNA

text: Mus musculus

text: mixed

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-10902_2:PCN_mRNA_shHbs1l_Neurite_2

text: ArrayExpress

text: neuron of cerebral cortex

text: neuron projection

text: house mouse

text: neonate

text: normal

text: wild type genotype

text: 4 to 8 individuals from litter10

characteristic: individual

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

text: mRNA

characteristic: protocol

text: Mus musculus

text: mixed

characteristic: sex

characteristic: strain


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-10902_2:PCN_mRNA_shHbs1l_Neurite_3

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: neuron of cerebral cortex

characteristic: cell type

text: neuron projection

characteristic: cellular component

text: house mouse

characteristic: common name

text: neonate

text: normal

text: wild type genotype

text: 4 to 8 individuals from litter10

text: Mus musculus

text: Mus musculus

text: brain

text: mRNA

text: Mus musculus

text: mixed


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: ArrayExpress

text: neuron of cerebral cortex

text: neuronal cell body

text: house mouse

characteristic: description

text: neonate

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: 4 to 8 individuals from litter10

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: mRNA

text: Mus musculus

text: mixed

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10902_2:PCN_mRNA_shScrambe-Hbs1l_Neurite_1

text: ArrayExpress

text: neuron of cerebral cortex

text: neuron projection

text: house mouse

text: neonate

text: normal

text: wild type genotype

text: 4 to 8 individuals from litter10

characteristic: individual

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

text: mRNA

characteristic: protocol

text: Mus musculus

text: mixed

characteristic: sex

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-10902_2:PCN_mRNA_shScrambe-Hbs1l_Neurite_2

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: neuron of cerebral cortex

characteristic: cell type

text: neuron projection

characteristic: cellular component

text: house mouse

characteristic: common name

text: neonate

text: normal

text: wild type genotype

text: 4 to 8 individuals from litter10

text: Mus musculus

text: Mus musculus

text: brain

text: mRNA

text: Mus musculus

text: mixed


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-10902_2:PCN_mRNA_shScrambe-Hbs1l_Neurite_3

text: ArrayExpress

text: neuron of cerebral cortex

text: neuron projection

text: house mouse

characteristic: description

text: neonate

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: 4 to 8 individuals from litter10

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: mRNA

text: Mus musculus

text: mixed

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-10902_2:PCN_mRNA_shScrambe-Hbs1l_Soma_1

text: ArrayExpress

text: neuron of cerebral cortex

text: neuronal cell body

text: house mouse

text: neonate

text: normal

text: wild type genotype

text: 4 to 8 individuals from litter10

characteristic: individual

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

text: mRNA

characteristic: protocol

text: Mus musculus

text: mixed

characteristic: sex

characteristic: strain


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-10902_2:PCN_mRNA_shScrambe-Hbs1l_Soma_2

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: neuron of cerebral cortex

characteristic: cell type

text: neuronal cell body

characteristic: cellular component

text: house mouse

characteristic: common name

text: neonate

text: normal

text: wild type genotype

text: 4 to 8 individuals from litter10

text: Mus musculus

text: Mus musculus

text: brain

text: mRNA

text: Mus musculus

text: mixed


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-10902_2:PCN_mRNA_shScrambe-Hbs1l_Soma_3

text: ArrayExpress

text: neuron of cerebral cortex

text: neuronal cell body

text: house mouse

characteristic: description

text: neonate

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: 4 to 8 individuals from litter10

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: mRNA

text: Mus musculus

text: mixed

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10902_2:PCN_mRNA_shScramble-Ago_Neurite_1

text: ArrayExpress

text: neuron of cerebral cortex

text: neuron projection

text: house mouse

text: neonate

text: normal

text: wild type genotype

text: 4 to 8 individuals from litter7

characteristic: individual

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

text: mRNA

characteristic: protocol

text: Mus musculus

text: mixed

characteristic: sex

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-10902_2:PCN_mRNA_shScramble-Ago_Neurite_2

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: neuron of cerebral cortex

characteristic: cell type

text: neuron projection

characteristic: cellular component

text: house mouse

characteristic: common name

text: neonate

text: normal

text: wild type genotype

text: 4 to 8 individuals from litter7

text: Mus musculus

text: Mus musculus

text: brain

text: mRNA

text: Mus musculus

text: mixed


text: Berlin Institute for Medical Systems Biology (BIMSB) Max Delbruck Center for Molecular Medicine

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-10902_2:PCN_mRNA_shScramble-Ago_Neurite_3

text: ArrayExpress

text: neuron of cerebral cortex

text: neuron projection

text: house mouse

characteristic: description

text: neonate

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: 4 to 8 individuals from litter7

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: mRNA

text: Mus musculus

text: mixed

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-10902_2:PCN_mRNA_shScramble-Ago_Soma_1

text: ArrayExpress

text: neuron of cerebral cortex

text: neuronal cell body

text: house mouse

text: neonate

text: normal

text: wild type genotype

text: 4 to 8 individuals from litter7

characteristic: individual

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

text: mRNA

characteristic: protocol

text: Mus musculus

text: mixed

characteristic: sex

characteristic: strain


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-10902_2:PCN_mRNA_shScramble-Ago_Soma_2

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: neuron of cerebral cortex

characteristic: cell type

text: neuronal cell body

characteristic: cellular component

text: house mouse

characteristic: common name

text: Protocols: Soma (neuronal cell body) samples were collected from top of the filter membrane and neurite (neuron projection) samples frpm the cleaned membranes at DIV9. See also: “Ludwik et al. 2019: Genome-wide analysis of RNA and protein localization and local translation in mESC-derived neurons” Cortical neurons were isolated from E14 and P0 pups and plated on microporous membranes in 6-well plates. Astrocytes were pre-seeded on the 6-well dishes around one week in advance of plating. Cells were cultured as previously described (Kaech & Banker, 2006). Neurons were transfected using lentiviral particles carrying either shRNA expression constructs or GFP constructs with inserts from one of the reporter library pools. Viral particles were applied onto the neurons between DIV1 and DIV5. After collection samples were immediately transferred into Trizol and RNA extraction was performed according to manufacturer’s instructions (see also Ludwik et al. 2019). 100 ng of total RNA from each sample were used for libraries preparation with either TruSeq stranded mRNA library preparation kit (Illumina 2002059), Truseq Stranded Total RNA Library kit (Illumina, 15032619) or SMART smRNaseq kit (Takara, 635029) according to the manufacturer’s recommendations.

text: neonate

text: normal

text: wild type genotype

text: 4 to 8 individuals from litter7

text: Mus musculus

text: Mus musculus

text: brain

text: mRNA

text: Mus musculus

text: mixed


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-10902_2:PCN_mRNA_shScramble-Ago_Soma_3

text: ArrayExpress

text: neuron of cerebral cortex

text: neuronal cell body

text: house mouse

characteristic: description

text: neonate

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: 4 to 8 individuals from litter7

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: mRNA

text: Mus musculus

text: mixed

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10902_2:PCN_mRNA_shScramble-Elavl_Neurite_1

text: ArrayExpress

text: neuron of cerebral cortex

text: neuron projection

text: house mouse

text: neonate

text: normal

text: wild type genotype

text: 4 to 8 individuals from litter8

characteristic: individual

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

text: mRNA

characteristic: protocol

text: Mus musculus

text: mixed

characteristic: sex

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-10902_2:PCN_mRNA_shScramble-Elavl_Neurite_2

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: neuron of cerebral cortex

characteristic: cell type

text: neuron projection

characteristic: cellular component

text: house mouse

characteristic: common name

text: neonate

text: normal

text: wild type genotype

text: 4 to 8 individuals from litter8

text: Mus musculus

text: Mus musculus

text: brain

text: mRNA

text: Mus musculus

text: mixed


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-10902_2:PCN_mRNA_shScramble-Elavl_Neurite_3

text: ArrayExpress

text: neuron of cerebral cortex

text: neuron projection

text: house mouse

characteristic: description

text: neonate

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: 4 to 8 individuals from litter8

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: mRNA

text: Mus musculus

text: mixed

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-10902_2:PCN_mRNA_shScramble-Elavl_Soma_1

text: ArrayExpress

text: neuron of cerebral cortex

text: neuronal cell body

text: house mouse

text: neonate

text: normal

text: wild type genotype

text: 4 to 8 individuals from litter8

characteristic: individual

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

text: mRNA

characteristic: protocol

text: Mus musculus

text: mixed

characteristic: sex

characteristic: strain


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-10902_2:PCN_mRNA_shScramble-Elavl_Soma_2

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: neuron of cerebral cortex

characteristic: cell type

text: neuronal cell body

characteristic: cellular component

text: house mouse

characteristic: common name

text: neonate

text: normal

text: wild type genotype

text: 4 to 8 individuals from litter8

text: Mus musculus

text: Mus musculus

text: brain

text: mRNA

text: Mus musculus

text: mixed


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-10902_2:PCN_mRNA_shScramble-Elavl_Soma_3

text: ArrayExpress

text: neuron of cerebral cortex

text: neuronal cell body

text: house mouse

characteristic: description

text: neonate

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: 4 to 8 individuals from litter8

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: mRNA

text: Mus musculus

text: mixed

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10902_2:PCN_Nzip-mutation-reporter_WT_Neurite_1

text: embryonic day 14

text: ArrayExpress

text: neuron of cerebral cortex

text: neuron projection

text: house mouse

text: Protocols: Soma (neuronal cell body) samples were collected from top of the filter membrane and neurite (neuron projection) samples frpm the cleaned membranes at DIV9. See also: “Ludwik et al. 2019: Genome-wide analysis of RNA and protein localization and local translation in mESC-derived neurons” Cortical neurons were isolated from E14 and P0 pups and plated on microporous membranes in 6-well plates. Astrocytes were pre-seeded on the 6-well dishes around one week in advance of plating. Cells were cultured as previously described (Kaech & Banker, 2006). Neurons were transfected using lentiviral particles carrying either shRNA expression constructs or GFP constructs with inserts from one of the reporter library pools. Viral particles were applied onto the neurons between DIV1 and DIV5. After collection samples were immediately transferred into Trizol and RNA extraction was performed according to manufacturer’s instructions (see also Ludwik et al. 2019). 100-200ng of total RNA was reverse transcribed into cDNA with a primer complementary to the 3' adapter flanking the tiles. UMIs were introduced during the second strand synthesis with a pool of primers complementary to the 5' adapter flanking the tiles.

text: embryo

text: normal

text: GFP-Nzip-mutation-reporter

characteristic: genetic modification

text: wild type genotype

text: 4 to 8 individuals from litter2

characteristic: individual

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

text: libraries contain only the Nzip-reporter inserts

characteristic: protocol

text: Mus musculus

text: mixed

characteristic: sex

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-10902_2:PCN_Nzip-mutation-reporter_WT_Neurite_2

characteristic: Submitter Id

text: embryonic day 14

characteristic: age

text: ArrayExpress

characteristic: broker name

text: neuron of cerebral cortex

characteristic: cell type

text: neuron projection

characteristic: cellular component

text: house mouse

characteristic: common name

characteristic: description

text: embryo

text: normal

text: GFP-Nzip-mutation-reporter

text: wild type genotype

text: 4 to 8 individuals from litter2

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: mixed


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10902_2:PCN_Nzip-mutation-reporter_WT_Neurite_3

text: embryonic day 14

text: ArrayExpress

text: neuron of cerebral cortex

text: neuron projection

text: house mouse

text: embryo

characteristic: developmental stage

text: normal

characteristic: disease

text: GFP-Nzip-mutation-reporter

characteristic: genetic modification

text: wild type genotype

characteristic: genotype

text: 4 to 8 individuals from litter2

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: Mus musculus

text: mixed

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Berlin Institute for Medical Systems Biology (BIMSB) Max Delbruck Center for Molecular Medicine

text: public

text: E-MTAB-10902_2:PCN_Nzip-mutation-reporter_WT_Soma_1

characteristic: Submitter Id

text: embryonic day 14

characteristic: age

text: ArrayExpress

text: neuron of cerebral cortex

text: neuronal cell body

text: house mouse

text: embryo

text: normal

text: GFP-Nzip-mutation-reporter

text: wild type genotype

text: 4 to 8 individuals from litter2

characteristic: individual

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

characteristic: protocol

text: Mus musculus

text: mixed

characteristic: sex

characteristic: strain


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10902_2:PCN_Nzip-mutation-reporter_WT_Soma_2

text: embryonic day 14

text: ArrayExpress

characteristic: broker name

text: neuron of cerebral cortex

characteristic: cell type

text: neuronal cell body

characteristic: cellular component

text: house mouse

characteristic: common name

characteristic: description

text: embryo

characteristic: developmental stage

text: normal

text: GFP-Nzip-mutation-reporter

text: wild type genotype

text: 4 to 8 individuals from litter2

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: mixed


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-10902_2:PCN_Nzip-mutation-reporter_WT_Soma_3

characteristic: Submitter Id

text: embryonic day 14

characteristic: age

text: ArrayExpress

text: neuron of cerebral cortex

text: neuronal cell body

text: house mouse

text: embryo

text: normal

characteristic: disease

text: GFP-Nzip-mutation-reporter

characteristic: genetic modification

text: wild type genotype

characteristic: genotype

text: 4 to 8 individuals from litter2

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: Mus musculus

text: mixed

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10902_2:PCN_Nzip-reporter_WT_Neurite_1

text: embryonic day 14

text: ArrayExpress

characteristic: broker name

text: neuron of cerebral cortex

text: neuron projection

text: house mouse

text: embryo

text: normal

text: GFP-Nzip-reporter

text: wild type genotype

text: 4 to 8 individuals from litter1

characteristic: individual

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

characteristic: protocol

text: Mus musculus

text: mixed

characteristic: sex

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-10902_2:PCN_Nzip-reporter_WT_Neurite_2

characteristic: Submitter Id

text: embryonic day 14

characteristic: age

text: ArrayExpress

text: neuron of cerebral cortex

characteristic: cell type

text: neuron projection

characteristic: cellular component

text: house mouse

characteristic: common name

characteristic: description

text: embryo

characteristic: developmental stage

text: normal

text: GFP-Nzip-reporter

text: wild type genotype

text: 4 to 8 individuals from litter1

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: mixed


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10902_2:PCN_Nzip-reporter_WT_Neurite_3

text: embryonic day 14

text: ArrayExpress

characteristic: broker name

text: neuron of cerebral cortex

text: neuron projection

text: house mouse

text: embryo

text: normal

characteristic: disease

text: GFP-Nzip-reporter

characteristic: genetic modification

text: wild type genotype

characteristic: genotype

text: 4 to 8 individuals from litter1

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: Mus musculus

text: mixed

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-10902_2:PCN_Nzip-reporter_WT_Soma_1

characteristic: Submitter Id

text: embryonic day 14

characteristic: age

text: ArrayExpress

text: neuron of cerebral cortex

text: neuronal cell body

text: house mouse

text: embryo

text: normal

text: GFP-Nzip-reporter

text: wild type genotype

text: 4 to 8 individuals from litter1

characteristic: individual

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

characteristic: protocol

text: Mus musculus

text: mixed

characteristic: sex

characteristic: strain


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10902_2:PCN_Nzip-reporter_WT_Soma_2

text: embryonic day 14

text: ArrayExpress

characteristic: broker name

text: neuron of cerebral cortex

characteristic: cell type

text: neuronal cell body

characteristic: cellular component

text: house mouse

characteristic: common name

characteristic: description

text: embryo

characteristic: developmental stage

text: normal

text: GFP-Nzip-reporter

text: wild type genotype

text: 4 to 8 individuals from litter1

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: mixed


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-10902_2:PCN_Nzip-reporter_WT_Soma_3

characteristic: Submitter Id

text: embryonic day 14

characteristic: age

text: ArrayExpress

text: neuron of cerebral cortex

text: neuronal cell body

text: house mouse

text: embryo

text: normal

characteristic: disease

text: GFP-Nzip-reporter

characteristic: genetic modification

text: wild type genotype

characteristic: genotype

text: 4 to 8 individuals from litter1

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: Mus musculus

text: mixed

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: embryonic day 14

text: ArrayExpress

characteristic: broker name

text: neuron of cerebral cortex

text: neuron projection

text: house mouse

text: Protocols: Soma (neuronal cell body) samples were collected from top of the filter membrane and neurite (neuron projection) samples frpm the cleaned membranes at DIV9. See also: “Ludwik et al. 2019: Genome-wide analysis of RNA and protein localization and local translation in mESC-derived neurons” Cortical neurons were isolated from E14 and P0 pups and plated on microporous membranes in 6-well plates. Astrocytes were pre-seeded on the 6-well dishes around one week in advance of plating. Cells were cultured as previously described (Kaech & Banker, 2006). Neurons were transfected using lentiviral particles carrying either shRNA expression constructs or GFP constructs with inserts from one of the reporter library pools. Viral particles were applied onto the neurons between DIV1 and DIV5. After collection samples were immediately transferred into Trizol and RNA extraction was performed according to manufacturer’s instructions (see also Ludwik et al. 2019). 100 ng of total RNA from each sample were used for libraries preparation with either TruSeq stranded mRNA library preparation kit (Illumina 2002059), Truseq Stranded Total RNA Library kit (Illumina, 15032619) or SMART smRNaseq kit (Takara, 635029) according to the manufacturer’s recommendations.

text: embryo

text: normal

text: wild type genotype

text: 4 to 8 individuals from litter6

characteristic: individual

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

text: smallRNA

characteristic: protocol

text: Mus musculus

text: mixed

characteristic: sex

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: Submitter Id

text: embryonic day 14

characteristic: age

text: ArrayExpress

text: neuron of cerebral cortex

characteristic: cell type

text: neuronal cell body

characteristic: cellular component

text: house mouse

characteristic: common name

characteristic: description

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: 4 to 8 individuals from litter6

text: Mus musculus

text: Mus musculus

text: brain

text: smallRNA

text: Mus musculus

text: mixed


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10902_2:PCN_totalRNA_WT_Neurite_1

text: embryonic day 14

text: ArrayExpress

characteristic: broker name

text: neuron of cerebral cortex

text: neuron projection

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: 4 to 8 individuals from litter5

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: totalRNA

text: Mus musculus

text: mixed

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-10902_2:PCN_totalRNA_WT_Neurite_2

characteristic: Submitter Id

text: embryonic day 14

text: ArrayExpress

text: neuron of cerebral cortex

text: neuron projection

text: house mouse

text: embryo

text: normal

text: wild type genotype

text: 4 to 8 individuals from litter5

characteristic: individual

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

text: totalRNA

characteristic: protocol

text: Mus musculus

text: mixed

characteristic: sex

characteristic: strain


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-10902_2:PCN_totalRNA_WT_Neurite_3

text: embryonic day 14

characteristic: age

text: ArrayExpress

text: neuron of cerebral cortex

characteristic: cell type

text: neuron projection

characteristic: cellular component

text: house mouse

characteristic: common name

characteristic: description

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: 4 to 8 individuals from litter5

text: Mus musculus

text: Mus musculus

text: brain

text: totalRNA

text: Mus musculus

text: mixed


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: embryonic day 14

text: ArrayExpress

characteristic: broker name

text: neuron of cerebral cortex

text: neuronal cell body

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: 4 to 8 individuals from litter5

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: totalRNA

text: Mus musculus

text: mixed

characteristic: title


text: Anopheles arabiensis

characteristic: ArrayExpress-Species

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Anopheles arabiensis

text: Anopheles arabiensis

text: Anopheles arabiensis


text: SC

text: public

text: SC

text: Lighthouse Lab in Glasgow

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Samples prepared at Lighthouse Lab in Glasgow by Harper VanSteenhouse, Yumi Kasai, David Gray, Carol Clugston, Anna Dominiczak and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: SC

characteristic: broker name

text: Rosalind Franklin Laboratory

text: not provided

text: Samples prepared at Rosalind Franklin Laboratory by Donald Fraser, Suki Lee, Rob Howes, The Rosalind Franklin Laboratory and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

text: United Kingdom

text: Scotland

text: Human

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: SC

text: Lighthouse Lab in Glasgow

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Scotland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

text: Human

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: SC

text: Rosalind Franklin Laboratory

text: not provided

text: United Kingdom

text: England

text: Human

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status


text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Rosalind Franklin Laboratory

characteristic: collecting institution

text: not provided

text: United Kingdom

text: Wales

text: Human

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Illumina mRNA TruSeq Stranded Kit

text: GATCGGAAGAGCACACGTCTGAACTCCAGTCAC[i7]ATCTCGTATGCCGTCTTCTGCTTG / AATGATACGGCGACCACCGAGATCTACAC[i5]ACACTCTTTCCCTACACGACGCTCTTCCGATCT

characteristic: adapters

text: SeBiMER

characteristic: collection date

text: Alexandrium minutum

characteristic: common name

text: coastal environment

characteristic: environment (biome)

text: Estuary

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: no

characteristic: environmental sample

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: eukaryote

characteristic: investigation type

text: sediment core germination

characteristic: isolation source

text: AGCGATAG-CTTCGCCT

characteristic: multiplex identifiers

text: Alexandrium minutum

text: Illumina PCR Primer Cocktail

characteristic: pcr primers

characteristic: project name

text: Strain obtained following single cell isolation after germination from sediment core

characteristic: sample description

characteristic: sample name

text: Alexandrium minutum

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

characteristic: strain

text: Alexandrium minutum strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Illumina mRNA TruSeq Stranded Kit

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: SeBiMER

characteristic: broker name

characteristic: collection date

text: Alexandrium minutum

text: coastal environment

text: Estuary

text: sediment

text: no

text: France

text: eukaryote

text: sediment core germination

text: AGCGATAG-ACGTCCTG

text: Alexandrium minutum

characteristic: organism

text: Illumina PCR Primer Cocktail

text: Alexandrium minutum

text: Sequencing by synthesis (Illumina)

text: Alexandrium minutum strain

characteristic: title


text: public

text: Illumina mRNA TruSeq Stranded Kit

text: SeBiMER

text: Alexandrium minutum

characteristic: common name

text: coastal environment

characteristic: environment (biome)

text: Bay

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: no

characteristic: environmental sample

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: eukaryote

characteristic: investigation type

text: sediment core germination

characteristic: isolation source

text: ATTACTCG-AGGCTATA

characteristic: multiplex identifiers

text: Alexandrium minutum

text: Illumina PCR Primer Cocktail

characteristic: pcr primers

characteristic: project name

characteristic: sample description

characteristic: sample name

text: Alexandrium minutum

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: Alexandrium minutum strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Illumina mRNA TruSeq Stranded Kit

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: SeBiMER

characteristic: broker name

characteristic: collection date

text: Alexandrium minutum

text: coastal environment

text: Bay

text: sediment

text: no

text: France

text: eukaryote

text: sediment core germination

text: ATTCAGAA-GCCTCTAT

text: Alexandrium minutum

characteristic: organism

text: Illumina PCR Primer Cocktail

text: Alexandrium minutum

text: Sequencing by synthesis (Illumina)

characteristic: strain

text: Alexandrium minutum strain


text: public

text: Illumina mRNA TruSeq Stranded Kit

text: SeBiMER

text: Alexandrium minutum

characteristic: common name

text: coastal environment

characteristic: environment (biome)

text: Bay

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: no

characteristic: environmental sample

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: eukaryote

characteristic: investigation type

text: sediment core germination

characteristic: isolation source

text: ATTACTCG-GCCTCTAT

characteristic: multiplex identifiers

text: Alexandrium minutum

text: Illumina PCR Primer Cocktail

characteristic: pcr primers

characteristic: project name

characteristic: sample description

characteristic: sample name

text: Alexandrium minutum

text: Sequencing by synthesis (Illumina)

text: Alexandrium minutum strain

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Illumina mRNA TruSeq Stranded Kit

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: SeBiMER

characteristic: broker name

characteristic: collection date

text: Alexandrium minutum

text: coastal environment

text: Bay

text: sediment

text: no

text: France

text: eukaryote

text: sediment core germination

text: ATTACTCG-GTCAGTAC

text: Alexandrium minutum

characteristic: organism

text: Illumina PCR Primer Cocktail

text: Alexandrium minutum

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: Alexandrium minutum strain


text: public

text: Illumina mRNA TruSeq Stranded Kit

text: SeBiMER

text: Alexandrium minutum

characteristic: common name

text: coastal environment

characteristic: environment (biome)

text: Bay

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: no

characteristic: environmental sample

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: eukaryote

characteristic: investigation type

text: sediment core germination

characteristic: isolation source

text: TCCGGAGA-GCCTCTAT

characteristic: multiplex identifiers

text: Alexandrium minutum

text: Illumina PCR Primer Cocktail

characteristic: pcr primers

characteristic: project name

characteristic: sample description

characteristic: sample name

text: Alexandrium minutum

text: Sequencing by synthesis (Illumina)

characteristic: strain

text: Alexandrium minutum strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Illumina mRNA TruSeq Stranded Kit

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: SeBiMER

characteristic: broker name

characteristic: collection date

text: Alexandrium minutum

text: coastal environment

text: Bay

text: sediment

text: no

text: France

text: eukaryote

text: sediment core germination

text: CGCTCATT-TAAGATTA

text: Alexandrium minutum

characteristic: organism

text: Illumina PCR Primer Cocktail

text: Alexandrium minutum

text: Sequencing by synthesis (Illumina)

text: Alexandrium minutum strain

characteristic: title


text: public

text: Illumina mRNA TruSeq Stranded Kit

text: SeBiMER

text: Alexandrium minutum

characteristic: common name

text: coastal environment

characteristic: environment (biome)

text: Bay

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: no

characteristic: environmental sample

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: eukaryote

characteristic: investigation type

text: sediment core germination

characteristic: isolation source

text: CGCTCATT-ACGTCCTG

characteristic: multiplex identifiers

text: Alexandrium minutum

text: Illumina PCR Primer Cocktail

characteristic: pcr primers

characteristic: project name

characteristic: sample description

characteristic: sample name

text: Alexandrium minutum

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: Alexandrium minutum strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Illumina mRNA TruSeq Stranded Kit

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: SeBiMER

characteristic: broker name

characteristic: collection date

text: Alexandrium minutum

text: coastal environment

text: Estuary

text: sediment

text: no

text: France

text: eukaryote

text: sediment core germination

text: AGCGATAG-GCCTCTAT

text: Alexandrium minutum

characteristic: organism

text: Illumina PCR Primer Cocktail

text: Alexandrium minutum

text: Sequencing by synthesis (Illumina)

characteristic: strain

text: Alexandrium minutum strain


text: public

text: Illumina mRNA TruSeq Stranded Kit

text: SeBiMER

text: Alexandrium minutum

characteristic: common name

text: coastal environment

characteristic: environment (biome)

text: Estuary

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: no

characteristic: environmental sample

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: eukaryote

characteristic: investigation type

text: sediment core germination

characteristic: isolation source

text: AGCGATAG-AGGATAGG

characteristic: multiplex identifiers

text: Alexandrium minutum

text: Illumina PCR Primer Cocktail

characteristic: pcr primers

characteristic: project name

characteristic: sample description

characteristic: sample name

text: Alexandrium minutum

text: Sequencing by synthesis (Illumina)

text: Alexandrium minutum strain

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Illumina mRNA TruSeq Stranded Kit

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: SeBiMER

characteristic: broker name

characteristic: collection date

text: Alexandrium minutum

text: coastal environment

text: Estuary

text: sediment

text: no

text: France

text: eukaryote

text: sediment core germination

text: AGCGATAG-TCAGAGCC

text: Alexandrium minutum

characteristic: organism

text: Illumina PCR Primer Cocktail

text: Alexandrium minutum

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: Alexandrium minutum strain


text: public

text: Illumina mRNA TruSeq Stranded Kit

text: SeBiMER

text: Alexandrium minutum

characteristic: common name

text: coastal environment

characteristic: environment (biome)

text: harbor

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: no

characteristic: environmental sample

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: eukaryote

characteristic: investigation type

text: sea water bloom sample

characteristic: isolation source

text: ATTCAGAA-TATAGCCT

characteristic: multiplex identifiers

text: Alexandrium minutum

text: Illumina PCR Primer Cocktail

characteristic: pcr primers

characteristic: project name

text: Strain obtained after single cell isolation from sea water bloom sample

characteristic: sample description

characteristic: sample name

text: Alexandrium minutum

text: Sequencing by synthesis (Illumina)

characteristic: strain

text: Alexandrium minutum strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Illumina mRNA TruSeq Stranded Kit

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: SeBiMER

characteristic: broker name

characteristic: collection date

text: Alexandrium minutum

text: coastal environment

text: harbor

text: water

text: no

text: Spain

text: eukaryote

text: sea water bloom sample

text: ATTCAGAA-ATAGAGGC

text: Alexandrium minutum

characteristic: organism

text: Illumina PCR Primer Cocktail

text: Alexandrium minutum

text: Sequencing by synthesis (Illumina)

text: Alexandrium minutum strain

characteristic: title


text: public

text: Illumina mRNA TruSeq Stranded Kit

text: SeBiMER

text: Alexandrium minutum

characteristic: common name

text: coastal environment

characteristic: environment (biome)

text: harbor

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: no

characteristic: environmental sample

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: eukaryote

characteristic: investigation type

text: sea water bloom sample

characteristic: isolation source

text: ATTCAGAA-CCTATCCT

characteristic: multiplex identifiers

text: Alexandrium minutum

text: Illumina PCR Primer Cocktail

characteristic: pcr primers

characteristic: project name

characteristic: sample description

characteristic: sample name

text: Alexandrium minutum

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: Alexandrium minutum strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Illumina mRNA TruSeq Stranded Kit

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: SeBiMER

characteristic: broker name

characteristic: collection date

text: Alexandrium minutum

text: coastal environment

text: harbor

text: water

text: no

text: Spain

text: eukaryote

text: sea water bloom sample

text: ATTCAGAA-GGCTCTGA

text: Alexandrium minutum

characteristic: organism

text: Illumina PCR Primer Cocktail

text: Alexandrium minutum

text: Sequencing by synthesis (Illumina)

characteristic: strain

text: Alexandrium minutum strain


text: public

text: Illumina mRNA TruSeq Stranded Kit

text: SeBiMER

text: Alexandrium minutum

characteristic: common name

text: coastal environment

characteristic: environment (biome)

text: harbor

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: no

characteristic: environmental sample

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: eukaryote

characteristic: investigation type

text: sea water bloom sample

characteristic: isolation source

text: ATTCAGAA-AGGCGAAG

characteristic: multiplex identifiers

text: Alexandrium minutum

text: Illumina PCR Primer Cocktail

characteristic: pcr primers

characteristic: project name

characteristic: sample description

characteristic: sample name

text: Alexandrium minutum

text: Sequencing by synthesis (Illumina)

text: Alexandrium minutum strain

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Illumina mRNA TruSeq Stranded Kit

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: SeBiMER

characteristic: broker name

characteristic: collection date

text: Alexandrium minutum

text: coastal environment

text: harbor

text: water

text: no

text: Spain

text: eukaryote

text: sea water bloom sample

text: ATTCAGAA-CAGGACGT

text: Alexandrium minutum

characteristic: organism

text: Illumina PCR Primer Cocktail

text: Alexandrium minutum

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: Alexandrium minutum strain


text: public

text: Illumina mRNA TruSeq Stranded Kit

text: SeBiMER

text: Alexandrium minutum

characteristic: common name

text: coastal environment

characteristic: environment (biome)

text: harbor

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: no

characteristic: environmental sample

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: eukaryote

characteristic: investigation type

text: sea water bloom sample

characteristic: isolation source

text: ATTCAGAA-GTACTGAC

characteristic: multiplex identifiers

text: Alexandrium minutum

text: Illumina PCR Primer Cocktail

characteristic: pcr primers

characteristic: project name

characteristic: sample description

characteristic: sample name

text: Alexandrium minutum

text: Sequencing by synthesis (Illumina)

characteristic: strain

text: Alexandrium minutum strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Anthony Smith, NICD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Anthony Smith, NICD

characteristic: Submitter Id

text: EnteroBase

characteristic: broker name

text: EnteroBase

text: A. Smith, National Institute for Communicable Diseases

characteristic: collected by

characteristic: collection date

text: Whole genome sequencing data uploaded by EnteroBase user

characteristic: description

text: South Africa, North West

characteristic: geographic location

text: Human, Blood culture

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Typhi

characteristic: serovar

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Glasgow Polyomics

text: public

tag: Namespace:Glasgow Polyomics

text: UPEC and NMEC strains expressing chromosomally FLAG-tagged DsdC were cultured in minimal medium for 3 h, spiked with D-serine for 2 h or left untreated, before harvesting for ChIP-seq

text: Escherichia coli O157:H7 str. EDL933

text: Escherichia coli O157:H7 str. EDL933


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: GUSTAVO DUARTE | ERIKA SANTORO

text: Federal University of Rio de Janeiro

characteristic: collecting institution

text: Brazil

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Bahia | Santa Cruz de Cabralia | Cora Vermelha

characteristic: geographic location (region and locality)

text: Reef Slope

characteristic: habitat

text: GUSTAVO DUARTE

characteristic: identified by

text: Federal University of Rio de Janeiro

text: adult

characteristic: lifestage

text: Mussismilia braziliensis

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

text: Mussismilia braziliensis

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: e0530d5f-0e43-4050-a21b-8334c974332e-ASG-specimen

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Derby

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: GUSTAVO DUARTE | ERIKA SANTORO

characteristic: collected by

text: Federal University of Rio de Janeiro

characteristic: collection date

text: Brazil

text: Reef Slope

text: GUSTAVO DUARTE

text: Federal University of Rio de Janeiro

text: adult

text: Mussismilia braziliensis

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Mussismilia braziliensis

text: NOT PROVIDED

text: d00c1c96-e373-4415-a288-727a9060d4bf-ASG-specimen

characteristic: title


characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: GUSTAVO DUARTE | ERIKA SANTORO

text: Federal University of Rio de Janeiro

characteristic: collecting institution

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Reef Slope

characteristic: habitat

text: GUSTAVO DUARTE

characteristic: identified by

text: Federal University of Rio de Janeiro

text: adult

characteristic: lifestage

text: Mussismilia braziliensis

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

text: Mussismilia braziliensis

characteristic: specimen id

text: NOT PROVIDED

text: c7347439-071f-482f-890c-a650f9fb9e3a-ASG-specimen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Derby

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: GUSTAVO DUARTE | ERIKA SANTORO

characteristic: collected by

text: Federal University of Rio de Janeiro

characteristic: collection date

text: Brazil

text: Reef Slope

text: GUSTAVO DUARTE

text: Federal University of Rio de Janeiro

text: adult

text: Mussismilia braziliensis

text: WHOLE ORGANISM

text: ASG

text: Mussismilia braziliensis

text: NOT PROVIDED

characteristic: specimen voucher

text: 9dd55493-80f3-47ff-99d7-97a9ed2d5528-ASG-specimen

characteristic: tolid


characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: GUSTAVO DUARTE | ERIKA SANTORO

text: Federal University of Rio de Janeiro

characteristic: collecting institution

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Reef Slope

characteristic: habitat

text: GUSTAVO DUARTE

characteristic: identified by

text: Federal University of Rio de Janeiro

text: adult

characteristic: lifestage

text: Mussismilia braziliensis

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

text: Mussismilia braziliensis

text: NOT PROVIDED

text: 2c9f1f7a-48ff-446d-88da-ba93f320889d-ASG-specimen

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Derby

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: GUSTAVO DUARTE | ERIKA SANTORO

characteristic: collected by

text: Federal University of Rio de Janeiro

characteristic: collection date

text: Brazil

text: Reef Slope

text: GUSTAVO DUARTE

text: Federal University of Rio de Janeiro

text: adult

text: Mussismilia braziliensis

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Mussismilia braziliensis

characteristic: specimen id

text: NOT PROVIDED

text: 6b629180-50e0-4c8f-aa72-b4530b90bedc-ASG-specimen


characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: GUSTAVO DUARTE | ERIKA SANTORO

text: Federal University of Rio de Janeiro

characteristic: collecting institution

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Reef Slope

characteristic: habitat

text: GUSTAVO DUARTE

characteristic: identified by

text: Federal University of Rio de Janeiro

text: adult

characteristic: lifestage

text: Mussismilia braziliensis

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Mussismilia braziliensis

text: NOT PROVIDED

characteristic: specimen voucher

text: 19104414-e120-4102-83a8-e6b4e661a584-ASG-specimen

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Derby

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: GUSTAVO DUARTE | ERIKA SANTORO

characteristic: collected by

text: Federal University of Rio de Janeiro

characteristic: collection date

text: Brazil

text: Reef Slope

text: GUSTAVO DUARTE

text: Federal University of Rio de Janeiro

text: adult

text: Mussismilia braziliensis

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

text: Mussismilia braziliensis

text: NOT PROVIDED

text: add65222-6aa2-4a9a-835c-a90b30f46418-ASG-specimen

characteristic: title


characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: GUSTAVO DUARTE | ERIKA SANTORO

text: Federal University of Rio de Janeiro

characteristic: collecting institution

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Reef Slope

characteristic: habitat

text: GUSTAVO DUARTE

characteristic: identified by

text: Federal University of Rio de Janeiro

text: adult

characteristic: lifestage

text: Mussismilia braziliensis

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Mussismilia braziliensis

characteristic: specimen id

text: NOT PROVIDED

text: cde959b1-767a-4b16-ad76-0407efb269c2-ASG-specimen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Derby

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: GUSTAVO DUARTE | ERIKA SANTORO

characteristic: collected by

text: Federal University of Rio de Janeiro

characteristic: collection date

text: Brazil

text: Reef Slope

text: GUSTAVO DUARTE

text: Federal University of Rio de Janeiro

text: adult

text: Mussismilia braziliensis

text: WHOLE ORGANISM

text: ASG

text: Mussismilia braziliensis

text: NOT PROVIDED

characteristic: specimen voucher

text: a7204b5b-a324-45e0-8cb6-d279b91ff5ca-ASG-specimen

characteristic: tolid


characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: GUSTAVO DUARTE | ERIKA SANTORO

text: Federal University of Rio de Janeiro

characteristic: collecting institution

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Reef Slope

characteristic: habitat

text: GUSTAVO DUARTE

characteristic: identified by

text: Federal University of Rio de Janeiro

text: adult

characteristic: lifestage

text: Mussismilia hispida

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

text: Mussismilia hispida

text: NOT PROVIDED

text: 724bccdf-186e-45f9-b5b2-7f238913cd21-ASG-specimen

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Derby

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: GUSTAVO DUARTE | ERIKA SANTORO

characteristic: collected by

text: Federal University of Rio de Janeiro

characteristic: collection date

text: Brazil

text: Reef Slope

text: GUSTAVO DUARTE

text: Federal University of Rio de Janeiro

text: adult

text: Mussismilia hispida

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Mussismilia hispida

characteristic: specimen id

text: NOT PROVIDED

text: dbfc0e01-443e-410d-98e6-a04d571eda8d-ASG-specimen


characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: GUSTAVO DUARTE | ERIKA SANTORO

text: Federal University of Rio de Janeiro

characteristic: collecting institution

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Reef Slope

characteristic: habitat

text: GUSTAVO DUARTE

characteristic: identified by

text: Federal University of Rio de Janeiro

text: adult

characteristic: lifestage

text: Mussismilia hispida

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Mussismilia hispida

text: NOT PROVIDED

characteristic: specimen voucher

text: 21c485f2-d260-48fb-aefd-d499181baf95-ASG-specimen

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Derby

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: GUSTAVO DUARTE | ERIKA SANTORO

characteristic: collected by

text: Federal University of Rio de Janeiro

characteristic: collection date

text: Brazil

text: Reef Slope

text: GUSTAVO DUARTE

text: Federal University of Rio de Janeiro

text: adult

text: Mussismilia hispida

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

text: Mussismilia hispida

text: NOT PROVIDED

text: 8bee964b-0aef-417a-b482-bffa1f80463c-ASG-specimen

characteristic: title


characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: GUSTAVO DUARTE | ERIKA SANTORO

text: Federal University of Rio de Janeiro

characteristic: collecting institution

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Reef Slope

characteristic: habitat

text: GUSTAVO DUARTE

characteristic: identified by

text: Federal University of Rio de Janeiro

text: adult

characteristic: lifestage

text: Mussismilia hispida

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Mussismilia hispida

characteristic: specimen id

text: NOT PROVIDED

text: 74d7d595-9f3c-460a-bb01-cacb3747f6a3-ASG-specimen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Derby

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: GUSTAVO DUARTE | ERIKA SANTORO

characteristic: collected by

text: Federal University of Rio de Janeiro

characteristic: collection date

text: Brazil

text: Reef Slope

text: GUSTAVO DUARTE

text: Federal University of Rio de Janeiro

text: adult

text: Mussismilia hispida

text: WHOLE ORGANISM

text: ASG

text: Mussismilia hispida

text: NOT PROVIDED

characteristic: specimen voucher

text: 57b89ccb-d613-4893-8462-c724aed4465f-ASG-specimen

characteristic: tolid


characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: GUSTAVO DUARTE | ERIKA SANTORO

text: Federal University of Rio de Janeiro

characteristic: collecting institution

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Bahia | Santa Cruz de Cabralia | Cora Vermelha

characteristic: geographic location (region and locality)

text: Reef Slope

characteristic: habitat

text: GUSTAVO DUARTE

characteristic: identified by

text: Federal University of Rio de Janeiro

text: adult

characteristic: lifestage

text: Mussismilia hispida

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

text: Mussismilia hispida

text: NOT PROVIDED

text: 31a2c462-28dd-4197-934e-257fecc42f67-ASG-specimen

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Derby

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: GUSTAVO DUARTE | ERIKA SANTORO

characteristic: collected by

text: Federal University of Rio de Janeiro

characteristic: collection date

text: Brazil

text: Reef Slope

text: GUSTAVO DUARTE

text: Federal University of Rio de Janeiro

text: adult

text: Mussismilia hispida

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Mussismilia hispida

characteristic: specimen id

text: NOT PROVIDED

text: 21421778-d0d0-477c-a40e-afc1c7997037-ASG-specimen


characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: GUSTAVO DUARTE | ERIKA SANTORO

text: Federal University of Rio de Janeiro

characteristic: collecting institution

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Reef Slope

characteristic: habitat

text: GUSTAVO DUARTE

characteristic: identified by

text: Federal University of Rio de Janeiro

text: adult

characteristic: lifestage

text: Mussismilia hispida

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Mussismilia hispida

text: NOT PROVIDED

characteristic: specimen voucher

text: 32f58361-c955-41be-9835-fa7d888e4dc1-ASG-specimen

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Derby

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: GUSTAVO DUARTE | ERIKA SANTORO

characteristic: collected by

text: Federal University of Rio de Janeiro

characteristic: collection date

text: Brazil

text: Reef Slope

text: GUSTAVO DUARTE

text: Federal University of Rio de Janeiro

text: adult

text: Mussismilia hispida

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

text: Mussismilia hispida

text: NOT PROVIDED

text: 7c6eed94-f6b8-4113-aae7-40c312a17f7b-ASG-specimen

characteristic: title


characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: GUSTAVO DUARTE | ERIKA SANTORO

text: Federal University of Rio de Janeiro

characteristic: collecting institution

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Reef Slope

characteristic: habitat

text: GUSTAVO DUARTE

characteristic: identified by

text: Federal University of Rio de Janeiro

text: adult

characteristic: lifestage

text: Mussismilia hispida

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Mussismilia hispida

characteristic: specimen id

text: NOT PROVIDED

text: 9f236ea3-8869-4939-86aa-8d8e7ea726c8-ASG-specimen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Derby

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: GUSTAVO DUARTE | ERIKA SANTORO

characteristic: collected by

text: Federal University of Rio de Janeiro

characteristic: collection date

text: Brazil

text: Reef Slope

text: GUSTAVO DUARTE

text: Federal University of Rio de Janeiro

text: adult

text: Mussismilia hispida

text: WHOLE ORGANISM

text: ASG

text: Mussismilia hispida

text: NOT PROVIDED

characteristic: specimen voucher

text: e2df7e02-0eac-490f-a1ed-0098d18559c3-ASG-specimen

characteristic: tolid


characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: GUSTAVO DUARTE | ERIKA SANTORO

text: Federal University of Rio de Janeiro

characteristic: collecting institution

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Reef Slope

characteristic: habitat

text: GUSTAVO DUARTE

characteristic: identified by

text: Federal University of Rio de Janeiro

text: adult

characteristic: lifestage

text: Mussismilia hispida

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

text: Mussismilia hispida

text: NOT PROVIDED

text: a4a586c5-c4a5-42c5-9996-1bf56b263055-ASG-specimen

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Derby

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: GUSTAVO DUARTE | ERIKA SANTORO

characteristic: collected by

text: Federal University of Rio de Janeiro

characteristic: collection date

text: Brazil

text: Reef Slope

text: GUSTAVO DUARTE

text: Federal University of Rio de Janeiro

text: adult

text: Mussismilia hispida

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Mussismilia hispida

characteristic: specimen id

text: NOT PROVIDED

text: b4cbc3bd-8f23-48f4-b7e6-f5aff2623526-ASG-specimen


characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: GUSTAVO DUARTE | ERIKA SANTORO

text: Federal University of Rio de Janeiro

characteristic: collecting institution

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Reef Slope

characteristic: habitat

text: GUSTAVO DUARTE

characteristic: identified by

text: Federal University of Rio de Janeiro

text: adult

characteristic: lifestage

text: Mussismilia hispida

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Mussismilia hispida

text: NOT PROVIDED

characteristic: specimen voucher

text: 6e189e37-afe9-4a52-b889-b2c8ecacdb42-ASG-specimen

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Derby

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: GUSTAVO DUARTE | ERIKA SANTORO

characteristic: collected by

text: Federal University of Rio de Janeiro

characteristic: collection date

text: Brazil

text: Reef Slope

text: GUSTAVO DUARTE

text: Federal University of Rio de Janeiro

text: adult

text: Mussismilia hispida

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

text: Mussismilia hispida

text: NOT PROVIDED

text: fac0f5dc-6ac2-4ab5-bfe5-74ce8b4147e4-ASG-specimen

characteristic: title


characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: GUSTAVO DUARTE | ERIKA SANTORO

text: Federal University of Rio de Janeiro

characteristic: collecting institution

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Reef Slope

characteristic: habitat

text: GUSTAVO DUARTE

characteristic: identified by

text: Federal University of Rio de Janeiro

text: adult

characteristic: lifestage

text: Mussismilia hispida

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Mussismilia hispida

characteristic: specimen id

text: NOT PROVIDED

text: a6562c53-d156-4cf1-91b4-a647a8e7b120-ASG-specimen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Derby

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: GUSTAVO DUARTE | ERIKA SANTORO

characteristic: collected by

text: Federal University of Rio de Janeiro

characteristic: collection date

text: Brazil

text: Reef Slope

text: GUSTAVO DUARTE

text: Federal University of Rio de Janeiro

text: adult

text: Mussismilia hispida

text: WHOLE ORGANISM

text: ASG

text: Mussismilia hispida

text: NOT PROVIDED

characteristic: specimen voucher

text: 2e516deb-33d6-46e3-94f0-c618d1f0b225-ASG-specimen

characteristic: tolid


characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: GUSTAVO DUARTE | ERIKA SANTORO

text: Federal University of Rio de Janeiro

characteristic: collecting institution

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Reef Slope

characteristic: habitat

text: GUSTAVO DUARTE

characteristic: identified by

text: Federal University of Rio de Janeiro

text: adult

characteristic: lifestage

text: Mussismilia hispida

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

text: Mussismilia hispida

text: NOT PROVIDED

text: 801262ad-ea99-4fc2-8fdc-3f74081f1b73-ASG-specimen

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Derby

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: GUSTAVO DUARTE | ERIKA SANTORO

characteristic: collected by

text: Federal University of Rio de Janeiro

characteristic: collection date

text: Brazil

text: Reef Slope

text: GUSTAVO DUARTE

text: Federal University of Rio de Janeiro

text: adult

text: Mussismilia hispida

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Mussismilia hispida

characteristic: specimen id

text: NOT PROVIDED

text: b8c4b428-35cc-415a-8f17-4509474b0737-ASG-specimen


characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: GUSTAVO DUARTE | ERIKA SANTORO

text: Federal University of Rio de Janeiro

characteristic: collecting institution

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Reef Top

characteristic: habitat

text: GUSTAVO DUARTE

characteristic: identified by

text: Federal University of Rio de Janeiro

text: adult

characteristic: lifestage

text: Siderastrea stellata

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Siderastrea stellata

text: NOT PROVIDED

characteristic: specimen voucher

text: a2f3a558-b567-422a-a83e-d48b948d89c7-ASG-specimen

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Derby

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: GUSTAVO DUARTE | ERIKA SANTORO

characteristic: collected by

text: Federal University of Rio de Janeiro

characteristic: collection date

text: Brazil

text: Reef Top

text: GUSTAVO DUARTE

text: Federal University of Rio de Janeiro

text: adult

text: Siderastrea stellata

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

text: Siderastrea stellata

text: NOT PROVIDED

text: 4706772d-e914-433c-847d-92835c4ba3f2-ASG-specimen

characteristic: title


characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: GUSTAVO DUARTE | ERIKA SANTORO

text: Federal University of Rio de Janeiro

characteristic: collecting institution

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Bahia | Santa Cruz de Cabralia | Cora Vermelha

characteristic: geographic location (region and locality)

text: Reef Top

characteristic: habitat

text: GUSTAVO DUARTE

characteristic: identified by

text: Federal University of Rio de Janeiro

text: adult

characteristic: lifestage

text: Siderastrea stellata

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Siderastrea stellata

characteristic: specimen id

text: NOT PROVIDED

text: 9a8ff79c-fb0a-4612-b10a-7a9e3a187d89-ASG-specimen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Derby

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: GUSTAVO DUARTE | ERIKA SANTORO

characteristic: collected by

text: Federal University of Rio de Janeiro

characteristic: collection date

text: Brazil

text: Reef Top

text: GUSTAVO DUARTE

text: Federal University of Rio de Janeiro

text: adult

text: Siderastrea stellata

text: WHOLE ORGANISM

text: ASG

text: Siderastrea stellata

text: NOT PROVIDED

characteristic: specimen voucher

text: a64c7879-13ca-4f84-b5f1-57c1dd8d9f5d-ASG-specimen

characteristic: tolid


characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: GUSTAVO DUARTE | ERIKA SANTORO

text: Federal University of Rio de Janeiro

characteristic: collecting institution

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Reef Top

characteristic: habitat

text: GUSTAVO DUARTE

characteristic: identified by

text: Federal University of Rio de Janeiro

text: adult

characteristic: lifestage

text: Siderastrea stellata

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

text: Siderastrea stellata

text: NOT PROVIDED

text: c0730c40-cc05-4624-a4c9-3b4bb6258a8e-ASG-specimen

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Derby

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: GUSTAVO DUARTE | ERIKA SANTORO

characteristic: collected by

text: Federal University of Rio de Janeiro

characteristic: collection date

text: Brazil

text: Reef Top

text: GUSTAVO DUARTE

text: Federal University of Rio de Janeiro

text: adult

text: Siderastrea stellata

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Siderastrea stellata

characteristic: specimen id

text: NOT PROVIDED

text: 0868822d-538f-4114-8818-79bf4614493e-ASG-specimen


characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: GUSTAVO DUARTE | ERIKA SANTORO

text: Federal University of Rio de Janeiro

characteristic: collecting institution

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Reef Top

characteristic: habitat

text: GUSTAVO DUARTE

characteristic: identified by

text: Federal University of Rio de Janeiro

text: adult

characteristic: lifestage

text: Siderastrea stellata

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Siderastrea stellata

text: NOT PROVIDED

characteristic: specimen voucher

text: 71b8253b-91e3-4a11-99bd-0d40d546662e-ASG-specimen

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Derby

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: GUSTAVO DUARTE | ERIKA SANTORO

characteristic: collected by

text: Federal University of Rio de Janeiro

characteristic: collection date

text: Brazil

text: Reef Top

text: GUSTAVO DUARTE

text: Federal University of Rio de Janeiro

text: adult

text: Siderastrea stellata

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

text: Siderastrea stellata

text: NOT PROVIDED

text: 8f49bf70-78aa-45c1-a5a4-3047d11d1c51-ASG-specimen

characteristic: title


characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: GUSTAVO DUARTE | ERIKA SANTORO

text: Federal University of Rio de Janeiro

characteristic: collecting institution

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Reef Top

characteristic: habitat

text: GUSTAVO DUARTE

characteristic: identified by

text: Federal University of Rio de Janeiro

text: adult

characteristic: lifestage

text: Siderastrea stellata

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Siderastrea stellata

characteristic: specimen id

text: NOT PROVIDED

text: 126d5ffe-8cbc-4960-96e8-d80af925dc82-ASG-specimen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Derby

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: GUSTAVO DUARTE | ERIKA SANTORO

characteristic: collected by

text: Federal University of Rio de Janeiro

characteristic: collection date

text: Brazil

text: Reef Top

text: GUSTAVO DUARTE

text: Federal University of Rio de Janeiro

text: adult

text: Siderastrea stellata

text: WHOLE ORGANISM

text: ASG

text: Siderastrea stellata

text: NOT PROVIDED

characteristic: specimen voucher

text: a7133718-c96c-4633-a91c-a7b7559edc28-ASG-specimen

characteristic: tolid


characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: COPO

text: GUSTAVO DUARTE | ERIKA SANTORO

text: Federal University of Rio de Janeiro

characteristic: collecting institution

text: great star coral

characteristic: common name

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Reef Slope

characteristic: habitat

text: GUSTAVO DUARTE

characteristic: identified by

text: Federal University of Rio de Janeiro

text: adult

characteristic: lifestage

text: Montastraea cavernosa

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

text: Montastraea cavernosa

text: NOT PROVIDED

text: 7679d842-ecfc-4372-9b66-7e44501ccd50-ASG-specimen

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Derby

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COPO

characteristic: broker name

text: GUSTAVO DUARTE | ERIKA SANTORO

characteristic: collected by

text: Federal University of Rio de Janeiro

characteristic: collection date

text: great star coral

text: Brazil

text: Reef Slope

text: GUSTAVO DUARTE

text: Federal University of Rio de Janeiro

text: adult

text: Montastraea cavernosa

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Montastraea cavernosa

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: 4ef17e6c-d1c4-427e-9a3d-7fb884b9dcb8-ASG-specimen