characteristic: ENA-CHECKLIST

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characteristic: collection method

text: not provided

text: Household Control PDC051

text: TRUE

text: HC

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

text: human-associated habitat

text: human-gut

text: feces

text: USA:CO:Denver

text: not provided

characteristic: host age

text: UBERON:feces

characteristic: host body habitat

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characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

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text: Homo sapiens

characteristic: host scientific name

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characteristic: host weight

text: years

text: cm

text: kg

text: Caltech

text: not provided

text: decimal degrees

text: adult

characteristic: life stage

text: decimal degrees

text: human gut metagenome

text: Caltech

text: TRUE

text: feces

text: human gut metagenome

text: not provided

characteristic: sex

text: PD Shotgun Metagenomics


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

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text: not provided

text: not provided

text: not provided

text: PD Patient PDC052

characteristic: description

text: TRUE

text: PD

characteristic: elevation

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

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text: not provided

text: UBERON:feces

text: UBERON:feces

text: human

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text: cm

text: kg

text: Caltech

text: not provided

characteristic: latitude

text: decimal degrees

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characteristic: longitude

text: decimal degrees

text: human gut metagenome

characteristic: organism

text: Caltech

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text: UCSDMI

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text: Household Control PDC053

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text: Host-associated

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text: Animal distal gut

text: urban biome

text: human-associated habitat

text: human-gut

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text: USA:CO:Denver

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characteristic: host age

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text: Caltech

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text: decimal degrees

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characteristic: life stage

text: decimal degrees

text: human gut metagenome

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text: human gut metagenome

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characteristic: sex

text: PD Shotgun Metagenomics


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: UCSDMI

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characteristic: elevation

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text: Host-associated

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characteristic: env biome

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text: UBERON:feces

text: UBERON:feces

text: human

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characteristic: latitude

text: decimal degrees

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characteristic: longitude

text: decimal degrees

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text: Host-associated

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text: urban biome

text: human-associated habitat

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text: USA:CO:Denver

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characteristic: host age

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text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

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text: not provided

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text: Homo sapiens

characteristic: host scientific name

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text: years

text: cm

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text: Caltech

text: not provided

text: decimal degrees

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characteristic: life stage

text: decimal degrees

text: human gut metagenome

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text: TRUE

text: feces

text: human gut metagenome

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characteristic: sex

text: PD Shotgun Metagenomics


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

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text: not provided

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text: TRUE

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characteristic: elevation

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

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characteristic: env feature

text: human-gut

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characteristic: geo loc name

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text: not provided

text: UBERON:feces

text: UBERON:feces

text: human

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text: years

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text: not provided

characteristic: latitude

text: decimal degrees

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characteristic: longitude

text: decimal degrees

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text: Caltech

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text: UCSDMI

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text: not provided

text: Household Control PDC057

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text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

text: human-associated habitat

text: human-gut

text: feces

text: USA:CO:Denver

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characteristic: host age

text: UBERON:feces

characteristic: host body habitat

text: not provided

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

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text: not provided

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text: Homo sapiens

characteristic: host scientific name

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text: years

text: cm

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text: Caltech

text: not provided

text: decimal degrees

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characteristic: life stage

text: decimal degrees

text: human gut metagenome

text: Caltech

text: TRUE

text: feces

text: human gut metagenome

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characteristic: sex

text: PD Shotgun Metagenomics


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

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text: public

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characteristic: Submitter Id

text: not provided

text: not provided

text: not provided

text: PD Patient PDC058

characteristic: description

text: TRUE

text: PD

characteristic: elevation

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

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characteristic: geo loc name

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text: not provided

text: UBERON:feces

text: UBERON:feces

text: human

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characteristic: host subject id

text: not provided

text: years

text: cm

text: kg

text: Caltech

text: not provided

characteristic: latitude

text: decimal degrees

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characteristic: longitude

text: decimal degrees

text: human gut metagenome

characteristic: organism

text: Caltech

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text: UCSDMI

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text: not provided

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text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

text: human-associated habitat

text: human-gut

text: feces

text: USA:CO:Denver

text: not provided

characteristic: host age

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characteristic: host body habitat

text: not provided

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text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

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text: not provided

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text: Homo sapiens

characteristic: host scientific name

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text: years

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text: Caltech

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text: decimal degrees

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characteristic: life stage

text: decimal degrees

text: human gut metagenome

text: Caltech

text: TRUE

text: feces

text: human gut metagenome

text: not provided

characteristic: sex

text: PD Shotgun Metagenomics


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

text: not provided

text: not provided

text: PD Patient PDC060

characteristic: description

text: TRUE

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characteristic: elevation

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

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text: human-gut

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characteristic: geo loc name

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text: not provided

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text: UBERON:feces

text: human

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characteristic: host subject id

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text: years

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text: kg

text: Caltech

text: not provided

characteristic: latitude

text: decimal degrees

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characteristic: longitude

text: decimal degrees

text: human gut metagenome

characteristic: organism

text: Caltech

text: TRUE

text: feces

characteristic: sample type

text: human gut metagenome

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characteristic: title


characteristic: ENA-CHECKLIST

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text: UCSDMI

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text: public

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text: not provided

text: not provided

characteristic: collection method

text: not provided

text: PD Patient PDC061

text: TRUE

text: PD

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

text: human-associated habitat

text: human-gut

text: feces

text: USA:CO:Denver

text: not provided

characteristic: host age

text: UBERON:feces

characteristic: host body habitat

text: not provided

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

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text: not provided

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text: Homo sapiens

characteristic: host scientific name

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text: years

text: cm

text: kg

text: Caltech

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text: decimal degrees

text: adult

characteristic: life stage

text: decimal degrees

text: human gut metagenome

text: Caltech

text: TRUE

text: feces

text: human gut metagenome

text: not provided

characteristic: sex

text: PD Shotgun Metagenomics


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

text: not provided

text: not provided

text: PD Patient PDC062

characteristic: description

text: TRUE

text: PD

characteristic: elevation

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

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characteristic: geo loc name

text: not provided

text: UBERON:feces

text: not provided

text: UBERON:feces

text: UBERON:feces

text: human

text: not provided

text: Homo sapiens

characteristic: host subject id

text: not provided

text: years

text: cm

text: kg

text: Caltech

text: not provided

characteristic: latitude

text: decimal degrees

text: adult

characteristic: longitude

text: decimal degrees

text: human gut metagenome

characteristic: organism

text: Caltech

text: TRUE

text: feces

characteristic: sample type

text: human gut metagenome

text: not provided

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text: PD Shotgun Metagenomics


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: not provided

characteristic: collection method

text: not provided

text: Household Control PDC063

text: TRUE

text: HC

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

text: human-associated habitat

text: human-gut

text: feces

text: USA:CO:Denver

text: not provided

characteristic: host age

text: UBERON:feces

characteristic: host body habitat

text: not provided

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

text: not provided

characteristic: host height

text: Homo sapiens

characteristic: host scientific name

characteristic: host taxid

text: not provided

characteristic: host weight

text: years

text: cm

text: kg

text: Caltech

text: not provided

text: decimal degrees

text: adult

characteristic: life stage

text: decimal degrees

text: human gut metagenome

text: Caltech

text: TRUE

text: feces

text: human gut metagenome

text: not provided

characteristic: sex

text: PD Shotgun Metagenomics


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

text: not provided

text: not provided

text: PD Patient PDL001

characteristic: description

text: TRUE

text: PD

characteristic: elevation

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

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characteristic: geo loc name

text: not provided

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text: not provided

text: UBERON:feces

text: UBERON:feces

text: human

text: not provided

text: Homo sapiens

characteristic: host subject id

text: not provided

text: years

text: cm

text: kg

text: Caltech

text: not provided

characteristic: latitude

text: decimal degrees

text: adult

characteristic: longitude

text: decimal degrees

text: human gut metagenome

characteristic: organism

text: Caltech

text: TRUE

text: feces

characteristic: sample type

text: human gut metagenome

text: not provided

text: PD Shotgun Metagenomics

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: not provided

characteristic: collection method

text: not provided

text: PD Patient PDL004

text: TRUE

text: PD

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

text: human-associated habitat

text: human-gut

text: feces

text: USA:CO:Denver

text: not provided

characteristic: host age

text: UBERON:feces

characteristic: host body habitat

text: not provided

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

text: not provided

characteristic: host height

text: Homo sapiens

characteristic: host scientific name

characteristic: host taxid

text: not provided

characteristic: host weight

text: years

text: cm

text: kg

text: Caltech

text: not provided

text: decimal degrees

text: adult

characteristic: life stage

text: decimal degrees

text: human gut metagenome

text: Caltech

text: TRUE

text: feces

text: human gut metagenome

text: not provided

characteristic: sex

text: PD Shotgun Metagenomics


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

text: not provided

text: not provided

text: PD Patient PDL005

characteristic: description

text: TRUE

text: PD

characteristic: elevation

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: USA:CO:Denver

characteristic: geo loc name

text: not provided

text: UBERON:feces

text: not provided

text: UBERON:feces

text: UBERON:feces

text: human

text: not provided

text: Homo sapiens

characteristic: host subject id

text: not provided

text: years

text: cm

text: kg

text: Caltech

text: not provided

characteristic: latitude

text: decimal degrees

text: adult

characteristic: longitude

text: decimal degrees

text: human gut metagenome

characteristic: organism

text: Caltech

text: TRUE

text: feces

characteristic: sample type

text: human gut metagenome

text: not provided

text: PD Shotgun Metagenomics

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: not provided

characteristic: collection method

text: not provided

text: PD Patient PDL009

text: TRUE

text: PD

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

text: human-associated habitat

text: human-gut

text: feces

text: USA:CO:Denver

text: not provided

characteristic: host age

text: UBERON:feces

characteristic: host body habitat

text: not provided

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

text: not provided

characteristic: host height

text: Homo sapiens

characteristic: host scientific name

characteristic: host taxid

text: not provided

characteristic: host weight

text: years

text: cm

text: kg

text: Caltech

text: not provided

text: decimal degrees

text: adult

characteristic: life stage

text: decimal degrees

text: human gut metagenome

text: Caltech

text: TRUE

text: feces

text: human gut metagenome

text: not provided

characteristic: sex

text: PD Shotgun Metagenomics


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

text: not provided

text: not provided

text: Household Control PDL010

characteristic: description

text: TRUE

text: HC

characteristic: elevation

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: USA:CO:Denver

characteristic: geo loc name

text: not provided

text: UBERON:feces

text: not provided

text: UBERON:feces

text: UBERON:feces

text: human

text: not provided

text: Homo sapiens

characteristic: host subject id

text: not provided

text: years

text: cm

text: kg

text: Caltech

text: not provided

characteristic: latitude

text: decimal degrees

text: adult

characteristic: longitude

text: decimal degrees

text: human gut metagenome

characteristic: organism

text: Caltech

text: TRUE

text: feces

characteristic: sample type

text: human gut metagenome

text: not provided

text: PD Shotgun Metagenomics

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: not provided

characteristic: collection method

text: not provided

text: PD Patient PDL012

text: TRUE

text: PD

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

text: human-associated habitat

text: human-gut

text: feces

text: USA:CO:Denver

text: not provided

characteristic: host age

text: UBERON:feces

characteristic: host body habitat

text: not provided

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

text: not provided

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text: Homo sapiens

characteristic: host scientific name

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characteristic: host weight

text: years

text: cm

text: kg

text: Caltech

text: not provided

text: decimal degrees

text: adult

characteristic: life stage

text: decimal degrees

text: human gut metagenome

text: Caltech

text: TRUE

text: feces

text: human gut metagenome

text: not provided

characteristic: sex

text: PD Shotgun Metagenomics


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

text: not provided

text: not provided

text: PD Patient PDL013

characteristic: description

text: TRUE

text: PD

characteristic: elevation

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: USA:CO:Denver

characteristic: geo loc name

text: not provided

text: UBERON:feces

text: not provided

text: UBERON:feces

text: UBERON:feces

text: human

text: not provided

text: Homo sapiens

characteristic: host subject id

text: not provided

text: years

text: cm

text: kg

text: Caltech

text: not provided

characteristic: latitude

text: decimal degrees

text: adult

characteristic: longitude

text: decimal degrees

text: human gut metagenome

characteristic: organism

text: Caltech

text: TRUE

text: feces

characteristic: sample type

text: human gut metagenome

text: not provided

text: PD Shotgun Metagenomics

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: not provided

characteristic: collection method

text: not provided

text: Household Control PDL014

text: TRUE

text: HC

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

text: human-associated habitat

text: human-gut

text: feces

text: USA:CO:Denver

text: not provided

characteristic: host age

text: UBERON:feces

characteristic: host body habitat

text: not provided

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

text: not provided

characteristic: host height

text: Homo sapiens

characteristic: host scientific name

characteristic: host taxid

text: not provided

characteristic: host weight

text: years

text: cm

text: kg

text: Caltech

text: not provided

text: decimal degrees

text: adult

characteristic: life stage

text: decimal degrees

text: human gut metagenome

text: Caltech

text: TRUE

text: feces

text: human gut metagenome

text: not provided

characteristic: sex

text: PD Shotgun Metagenomics


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

text: not provided

text: not provided

text: PD Patient PDL015

characteristic: description

text: TRUE

text: PD

characteristic: elevation

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: USA:CO:Denver

characteristic: geo loc name

text: not provided

text: UBERON:feces

text: not provided

text: UBERON:feces

text: UBERON:feces

text: human

text: not provided

text: Homo sapiens

characteristic: host subject id

text: not provided

text: years

text: cm

text: kg

text: Caltech

text: not provided

characteristic: latitude

text: decimal degrees

text: adult

characteristic: longitude

text: decimal degrees

text: human gut metagenome

characteristic: organism

text: Caltech

text: TRUE

text: feces

characteristic: sample type

text: human gut metagenome

text: not provided

text: PD Shotgun Metagenomics

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: not provided

characteristic: collection method

text: not provided

text: Household Control PDL016

text: TRUE

text: HC

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

text: human-associated habitat

text: human-gut

text: feces

text: USA:CO:Denver

text: not provided

characteristic: host age

text: UBERON:feces

characteristic: host body habitat

text: not provided

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

text: not provided

characteristic: host height

text: Homo sapiens

characteristic: host scientific name

characteristic: host taxid

text: not provided

characteristic: host weight

text: years

text: cm

text: kg

text: Caltech

text: not provided

text: decimal degrees

text: adult

characteristic: life stage

text: decimal degrees

text: human gut metagenome

text: Caltech

text: TRUE

text: feces

text: human gut metagenome

text: not provided

characteristic: sex

text: PD Shotgun Metagenomics


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

text: not provided

text: not provided

text: PD Patient PDL017

characteristic: description

text: TRUE

text: PD

characteristic: elevation

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: USA:CO:Denver

characteristic: geo loc name

text: not provided

text: UBERON:feces

text: not provided

text: UBERON:feces

text: UBERON:feces

text: human

text: not provided

text: Homo sapiens

characteristic: host subject id

text: not provided

text: years

text: cm

text: kg

text: Caltech

text: not provided

characteristic: latitude

text: decimal degrees

text: adult

characteristic: longitude

text: decimal degrees

text: human gut metagenome

characteristic: organism

text: Caltech

text: TRUE

text: feces

characteristic: sample type

text: human gut metagenome

text: not provided

text: PD Shotgun Metagenomics

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: not provided

characteristic: collection method

text: not provided

text: Household Control PDL018

text: TRUE

text: HC

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

text: human-associated habitat

text: human-gut

text: feces

text: USA:CO:Denver

text: not provided

characteristic: host age

text: UBERON:feces

characteristic: host body habitat

text: not provided

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

text: not provided

characteristic: host height

text: Homo sapiens

characteristic: host scientific name

characteristic: host taxid

text: not provided

characteristic: host weight

text: years

text: cm

text: kg

text: Caltech

text: not provided

text: decimal degrees

text: adult

characteristic: life stage

text: decimal degrees

text: human gut metagenome

text: Caltech

text: TRUE

text: feces

text: human gut metagenome

text: not provided

characteristic: sex

text: PD Shotgun Metagenomics


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

text: not provided

text: not provided

text: PD Patient PDL019

characteristic: description

text: TRUE

text: PD

characteristic: elevation

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: USA:CO:Denver

characteristic: geo loc name

text: not provided

text: UBERON:feces

text: not provided

text: UBERON:feces

text: UBERON:feces

text: human

text: not provided

text: Homo sapiens

characteristic: host subject id

text: not provided

text: years

text: cm

text: kg

text: Caltech

text: not provided

characteristic: latitude

text: decimal degrees

text: adult

characteristic: longitude

text: decimal degrees

text: human gut metagenome

characteristic: organism

text: Caltech

text: TRUE

text: feces

characteristic: sample type

text: human gut metagenome

text: not provided

text: PD Shotgun Metagenomics

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: not provided

characteristic: collection method

text: not provided

text: PD Patient PDL023

text: TRUE

text: PD

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

text: human-associated habitat

text: human-gut

text: feces

text: USA:CO:Denver

text: not provided

characteristic: host age

text: UBERON:feces

characteristic: host body habitat

text: not provided

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

text: not provided

characteristic: host height

text: Homo sapiens

characteristic: host scientific name

characteristic: host taxid

text: not provided

characteristic: host weight

text: years

text: cm

text: kg

text: Caltech

text: not provided

text: decimal degrees

text: adult

characteristic: life stage

text: decimal degrees

text: human gut metagenome

text: Caltech

text: TRUE

text: feces

text: human gut metagenome

text: not provided

characteristic: sex

text: PD Shotgun Metagenomics


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

text: not provided

text: not provided

text: PD Patient PDL025

characteristic: description

text: TRUE

text: PD

characteristic: elevation

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

characteristic: env biome

text: human-associated habitat

characteristic: env feature

text: human-gut

characteristic: env package

text: feces

text: USA:CO:Denver

characteristic: geo loc name

text: not provided

text: UBERON:feces

text: not provided

text: UBERON:feces

text: UBERON:feces

text: human

text: not provided

text: Homo sapiens

characteristic: host subject id

text: not provided

text: years

text: cm

text: kg

text: Caltech

text: not provided

characteristic: latitude

text: decimal degrees

text: adult

characteristic: longitude

text: decimal degrees

text: human gut metagenome

characteristic: organism

text: Caltech

text: TRUE

text: feces

characteristic: sample type

text: human gut metagenome

text: not provided

text: PD Shotgun Metagenomics

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: not provided

characteristic: collection method

text: not provided

text: Household Control PDL026

text: TRUE

text: HC

text: meters

text: Host-associated

text: Animal

text: Animal distal gut

text: urban biome

text: human-associated habitat

text: human-gut

text: feces

text: USA:CO:Denver

text: not provided

characteristic: host age

text: UBERON:feces

characteristic: host body habitat

text: not provided

characteristic: host body mass index

text: UBERON:feces

characteristic: host body product

text: UBERON:feces

characteristic: host body site

text: human

characteristic: host common name

text: not provided

characteristic: host height

text: Homo sapiens

characteristic: host scientific name

characteristic: host taxid

text: not provided

characteristic: host weight

text: years

text: cm

text: kg

text: Caltech

text: not provided

text: decimal degrees

text: adult

characteristic: life stage

text: decimal degrees

text: human gut metagenome

text: Caltech

text: TRUE

text: feces

text: human gut metagenome

text: not provided

characteristic: sex

text: PD Shotgun Metagenomics


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: SRA accession

tag: Namespace:Seoul National University Bundang Hospital

characteristic: Submitter Id

text: human

characteristic: common name

text: Homo sapiens

characteristic: organism

text: Homo sapiens


text: Seoul National University Bundang Hospital

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: human

text: Homo sapiens

text: Homo sapiens


text: Open Genomes

text: public

tag: Namespace:Open Genomes

text: human

text: human donor

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: male

characteristic: title


text: public

tag: Namespace:Public Health Authority of the Slovak Republic

text: Science Park of Comenius University of Bratislava

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Slovakia

characteristic: geographic location (country and/or sea)

unit: year

characteristic: host age

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: RNA

characteristic: isolate

text: Nasopharyngeal swab

characteristic: isolation source-host associated

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Public Health Authority of the Slovak Republic

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

characteristic: common name

text: Slovakia

text: Human

text: not provided

text: Homo sapiens

text: female

text: RNA

text: Nasopharyngeal swab

characteristic: organism


text: public

characteristic: INSDC status

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Slovakia

characteristic: geographic location (country and/or sea)

characteristic: host age

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: RNA

text: Nasopharyngeal swab


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Anthony Smith, NICD

text: public

tag: Namespace:Anthony Smith, NICD

text: EnteroBase

text: EnteroBase

text: A. Smith, National Institute for Communicable Diseases

characteristic: collected by

text: Whole genome sequencing data uploaded by EnteroBase user

characteristic: description

text: South Africa, Eastern Cape

characteristic: geographic location

text: Human, Other

characteristic: isolation source

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis

characteristic: serovar

characteristic: strain

characteristic: title


text: Anthony Smith, NICD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: EnteroBase

characteristic: broker name

text: EnteroBase

characteristic: collection date

text: South Africa, KwaZulu-Natal

text: Human, Blood culture

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Enteritidis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Gauteng

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

characteristic: collected by

characteristic: description

text: South Africa, Western Cape

characteristic: geographic location

text: Human, Urine

characteristic: isolation source

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis


text: Anthony Smith, NICD

characteristic: INSDC center name

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Western Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Typhimurium

characteristic: serovar

characteristic: strain

characteristic: title


text: Anthony Smith, NICD

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: EnteroBase

text: EnteroBase

text: South Africa, Free State

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis


text: Anthony Smith, NICD

text: public

characteristic: Submitter Id

text: EnteroBase

characteristic: broker name

text: EnteroBase

characteristic: collection date

text: South Africa, Western Cape

text: Human, Blood culture

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Enteritidis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Eastern Cape

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Derby


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

characteristic: collected by

characteristic: description

text: South Africa, North West

characteristic: geographic location

text: Human, Stool

characteristic: isolation source

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis


text: Anthony Smith, NICD

characteristic: INSDC center name

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Western Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Dublin

characteristic: serovar

characteristic: strain

characteristic: title


text: Anthony Smith, NICD

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: EnteroBase

text: EnteroBase

text: South Africa, Western Cape

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Heidelberg


text: Anthony Smith, NICD

text: public

characteristic: Submitter Id

text: EnteroBase

characteristic: broker name

text: EnteroBase

characteristic: collection date

text: South Africa, Gauteng

text: Human, Blood culture

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Enteritidis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Gauteng

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Typhimurium


text: IMEDEA

text: public

text: Metagenome from Fuerteventura solar saltern

characteristic: description

text: brine metagenome

text: brine metagenome

text: Fuerteventura


E-MTAB-11807:Sample 14

text: Quadram Institute Bioscience

characteristic: INSDC center name

text: public

text: E-MTAB-11807:Sample 14

tag: Namespace:Quadram Institute Bioscience

text: ArrayExpress

text: Protocols: All the samples were grown in LB medium The DNA was extracted using Zymo kit for bacterial / fungal DNA extraction The library was made using modified Illumina protocol to sequence from the transposon and identifying transposon-genome junctions

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Sample 14


E-MTAB-11807:Sample 2

text: Quadram Institute Bioscience

text: public

text: E-MTAB-11807:Sample 2

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Sample 2


E-MTAB-11807:Sample 1

text: Quadram Institute Bioscience

text: public

text: E-MTAB-11807:Sample 1

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Sample 1


E-MTAB-11807:Sample 13

text: Quadram Institute Bioscience

text: public

text: E-MTAB-11807:Sample 13

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Sample 13


E-MTAB-11807:Sample 15

text: Quadram Institute Bioscience

text: public

text: E-MTAB-11807:Sample 15

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Sample 15


E-MTAB-11807:Sample 3

text: Quadram Institute Bioscience

text: public

text: E-MTAB-11807:Sample 3

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Sample 3


E-MTAB-11807:Sample 17

text: Quadram Institute Bioscience

text: public

text: E-MTAB-11807:Sample 17

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Sample 17


E-MTAB-11807:Sample 5

text: Quadram Institute Bioscience

text: public

text: E-MTAB-11807:Sample 5

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Sample 5


E-MTAB-11807:Sample 16

text: Quadram Institute Bioscience

text: public

text: E-MTAB-11807:Sample 16

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Sample 16


E-MTAB-11807:Sample 4

text: Quadram Institute Bioscience

text: public

text: E-MTAB-11807:Sample 4

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Sample 4


E-MTAB-11807:Sample 18

text: Quadram Institute Bioscience

text: public

text: E-MTAB-11807:Sample 18

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Sample 18


E-MTAB-11807:Sample 6

text: Quadram Institute Bioscience

text: public

text: E-MTAB-11807:Sample 6

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Sample 6


E-MTAB-11807:Sample 11

text: Quadram Institute Bioscience

text: public

text: E-MTAB-11807:Sample 11

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Sample 11


E-MTAB-11807:Sample 23

text: Quadram Institute Bioscience

text: public

text: E-MTAB-11807:Sample 23

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Sample 23


E-MTAB-11807:Sample 10

text: Quadram Institute Bioscience

text: public

text: E-MTAB-11807:Sample 10

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Sample 10


E-MTAB-11807:Sample 22

text: Quadram Institute Bioscience

text: public

text: E-MTAB-11807:Sample 22

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Sample 22


E-MTAB-11807:Sample 12

text: Quadram Institute Bioscience

text: public

text: E-MTAB-11807:Sample 12

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Sample 12


E-MTAB-11807:Sample 24

text: Quadram Institute Bioscience

text: public

text: E-MTAB-11807:Sample 24

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Sample 24


E-MTAB-11807:Sample 20

text: Quadram Institute Bioscience

text: public

text: E-MTAB-11807:Sample 20

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Sample 20


E-MTAB-11807:Sample 8

text: Quadram Institute Bioscience

text: public

text: E-MTAB-11807:Sample 8

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Sample 8


E-MTAB-11807:Sample 19

text: Quadram Institute Bioscience

text: public

text: E-MTAB-11807:Sample 19

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Sample 19


E-MTAB-11807:Sample 7

text: Quadram Institute Bioscience

text: public

text: E-MTAB-11807:Sample 7

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

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E-MTAB-11807:Sample 21

text: Quadram Institute Bioscience

text: public

text: E-MTAB-11807:Sample 21

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

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E-MTAB-11807:Sample 9

text: Quadram Institute Bioscience

text: public

text: E-MTAB-11807:Sample 9

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

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E-MTAB-11808:Sample 2

text: Quadram Institute

text: public

text: E-MTAB-11808:Sample 2

tag: Namespace:Quadram Institute

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

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E-MTAB-11808:Sample 5

text: Quadram Institute

text: public

text: E-MTAB-11808:Sample 5

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

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E-MTAB-11808:Sample 1

text: Quadram Institute

text: public

text: E-MTAB-11808:Sample 1

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text: Escherichia coli BW25113

text: Escherichia coli BW25113

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E-MTAB-11808:Sample 4

text: Quadram Institute

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text: E-MTAB-11808:Sample 4

text: ArrayExpress

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text: Escherichia coli BW25113

text: Escherichia coli BW25113

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E-MTAB-11808:Sample 3

text: Quadram Institute

text: public

text: E-MTAB-11808:Sample 3

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

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E-MTAB-11808:Sample 6

text: Quadram Institute

text: public

text: E-MTAB-11808:Sample 6

text: ArrayExpress

text: Escherichia coli BW25113

text: Escherichia coli BW25113

text: Escherichia coli BW25113

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text: National Virus Reference Laboratory

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text: hCov-19 Illumina reads obtained following the Artic v3 protocol

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text: Ireland

text: Europe / Ireland / Cavan

text: human

text: not provided

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text: Homo sapiens

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text: hCoV-19/Ireland/CN-NVRL-ecS22IRL00289406/2022

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text: Europe / Ireland / Cavan

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text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

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text: Europe / Ireland / Cavan

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text: Severe acute respiratory syndrome coronavirus 2

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text: hCoV-19/Ireland/CN-NVRL-S22IRL00290141/2022

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text: Europe / Ireland / Cavan

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text: hCoV-19/Ireland/CN-NVRL-S22IRL00290124/2022

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text: hCoV-19/Ireland/CO-NVRL-S22IRL00336522/2022

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text: Europe / Ireland / Cork

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text: hCoV-19/Ireland/CO-NVRL-S22IRL00336060/2022

characteristic: title