text: LNU

text: public

characteristic: collection date

text: marine pelagic biome (ENVO:01000023)

characteristic: environment (biome)

text: brackish water body (ENVO:01001321)

characteristic: environment (feature)

text: brackish water (ENVO:00002019)

characteristic: environment (material)

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: aquatic metagenome

characteristic: organism

text: aerobic

text: LMO 2016, 2017 (0.2, 3-0.2, 3)

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: LMO 16S 2016-11-16, filter fraction:3

text: water

characteristic: water environmental package


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water body (ENVO:01001321)

text: brackish water (ENVO:00002019)

text: Baltic Sea

unit: m

unit: DD

text: mimarks-survey

text: aquatic metagenome

text: aerobic

characteristic: oxygenation status of sample

text: 341F (CCTACGGGNGGCWGCAG) and 805R (GACTACHVGGGTATCTAATCC)

characteristic: pcr primers

text: LMO 2016, 2017 (0.2, 3-0.2, 3)

characteristic: project name

text: Filter setup: 3

characteristic: sample collection device or method

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: LMO 16S 2016-12-01, filter fraction:3

characteristic: title

text: water


text: LNU

text: public

characteristic: collection date

text: marine pelagic biome (ENVO:01000023)

characteristic: environment (biome)

text: brackish water body (ENVO:01001321)

characteristic: environment (feature)

text: brackish water (ENVO:00002019)

characteristic: environment (material)

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: aquatic metagenome

characteristic: organism

text: aerobic

text: LMO 2016, 2017 (0.2, 3-0.2, 3)

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: LMO 16S 2016-12-15, filter fraction:3

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water body (ENVO:01001321)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: mimarks-survey

text: aquatic metagenome

text: aerobic

characteristic: oxygenation status of sample

characteristic: pcr primers

text: LMO 2016, 2017 (0.2, 3-0.2, 3)

characteristic: project name

text: Filter setup: 0.2

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

text: LMO 16S 2017-05-09, filter fraction:0.2

text: water


text: LNU

text: public

characteristic: collection date

text: marine pelagic biome (ENVO:01000023)

characteristic: environment (biome)

text: brackish water body (ENVO:01001321)

characteristic: environment (feature)

text: brackish water (ENVO:00002019)

characteristic: environment (material)

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: aquatic metagenome

characteristic: organism

text: aerobic

text: LMO 2016, 2017 (0.2, 3-0.2, 3)

text: Filter setup: 3-0.2

characteristic: sample collection device or method

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: LMO 16S 2017-01-17, filter fraction:3-0.2

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water body (ENVO:01001321)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: mimarks-survey

text: aquatic metagenome

text: aerobic

text: LMO 2016, 2017 (0.2, 3-0.2, 3)

text: Filter setup: 3-0.2

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: LMO 16S 2017-02-15, filter fraction:3-0.2

text: water

characteristic: water environmental package


text: LNU

text: public

characteristic: collection date

text: marine pelagic biome (ENVO:01000023)

characteristic: environment (biome)

text: brackish water body (ENVO:01001321)

characteristic: environment (feature)

text: brackish water (ENVO:00002019)

characteristic: environment (material)

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: aquatic metagenome

characteristic: organism

text: aerobic

characteristic: oxygenation status of sample

characteristic: pcr primers

text: LMO 2016, 2017 (0.2, 3-0.2, 3)

characteristic: project name

text: Filter setup: 3-0.2

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

text: LMO 16S 2017-03-02, filter fraction:3-0.2

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water body (ENVO:01001321)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: mimarks-survey

text: aquatic metagenome

text: aerobic

text: LMO 2016, 2017 (0.2, 3-0.2, 3)

text: Filter setup: 3-0.2

characteristic: sample collection device or method

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: LMO 16S 2017-03-14, filter fraction:3-0.2

characteristic: title

text: water


text: LNU

text: public

characteristic: collection date

text: marine pelagic biome (ENVO:01000023)

characteristic: environment (biome)

text: brackish water body (ENVO:01001321)

characteristic: environment (feature)

text: brackish water (ENVO:00002019)

characteristic: environment (material)

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: aquatic metagenome

characteristic: organism

text: aerobic

text: LMO 2016, 2017 (0.2, 3-0.2, 3)

text: Filter setup: 3-0.2

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: LMO 16S 2017-03-28, filter fraction:3-0.2

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water body (ENVO:01001321)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: mimarks-survey

text: aquatic metagenome

text: aerobic

characteristic: oxygenation status of sample

characteristic: pcr primers

text: LMO 2016, 2017 (0.2, 3-0.2, 3)

characteristic: project name

text: Filter setup: 3-0.2

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

text: LMO 16S 2017-04-12, filter fraction:3-0.2

text: water


text: LNU

text: public

characteristic: collection date

text: marine pelagic biome (ENVO:01000023)

characteristic: environment (biome)

text: brackish water body (ENVO:01001321)

characteristic: environment (feature)

text: brackish water (ENVO:00002019)

characteristic: environment (material)

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: aquatic metagenome

characteristic: organism

text: aerobic

text: LMO 2016, 2017 (0.2, 3-0.2, 3)

text: Filter setup: 3-0.2

characteristic: sample collection device or method

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: LMO 16S 2017-04-27, filter fraction:3-0.2

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water body (ENVO:01001321)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: mimarks-survey

text: aquatic metagenome

text: aerobic

text: LMO 2016, 2017 (0.2, 3-0.2, 3)

text: Filter setup: 3-0.2

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: LMO 16S 2017-05-09, filter fraction:3-0.2

text: water

characteristic: water environmental package


text: LNU

text: public

characteristic: collection date

text: marine pelagic biome (ENVO:01000023)

characteristic: environment (biome)

text: brackish water body (ENVO:01001321)

characteristic: environment (feature)

text: brackish water (ENVO:00002019)

characteristic: environment (material)

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: aquatic metagenome

characteristic: organism

text: aerobic

characteristic: oxygenation status of sample

characteristic: pcr primers

text: LMO 2016, 2017 (0.2, 3-0.2, 3)

characteristic: project name

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

text: LMO 16S 2017-01-17, filter fraction:3

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water body (ENVO:01001321)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: mimarks-survey

text: aquatic metagenome

text: aerobic

text: LMO 2016, 2017 (0.2, 3-0.2, 3)

text: Filter setup: 3

characteristic: sample collection device or method

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: LMO 16S 2017-02-15, filter fraction:3

characteristic: title

text: water


text: LNU

text: public

characteristic: collection date

text: marine pelagic biome (ENVO:01000023)

characteristic: environment (biome)

text: brackish water body (ENVO:01001321)

characteristic: environment (feature)

text: brackish water (ENVO:00002019)

characteristic: environment (material)

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: aquatic metagenome

characteristic: organism

text: aerobic

text: LMO 2016, 2017 (0.2, 3-0.2, 3)

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: LMO 16S 2017-03-02, filter fraction:3

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water body (ENVO:01001321)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: mimarks-survey

text: aquatic metagenome

text: aerobic

characteristic: oxygenation status of sample

characteristic: pcr primers

text: LMO 2016, 2017 (0.2, 3-0.2, 3)

characteristic: project name

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

text: LMO 16S 2017-03-14, filter fraction:3

text: water


text: LNU

text: public

characteristic: collection date

text: marine pelagic biome (ENVO:01000023)

characteristic: environment (biome)

text: brackish water body (ENVO:01001321)

characteristic: environment (feature)

text: brackish water (ENVO:00002019)

characteristic: environment (material)

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: aquatic metagenome

characteristic: organism

text: aerobic

text: LMO 2016, 2017 (0.2, 3-0.2, 3)

text: Filter setup: 3

characteristic: sample collection device or method

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: LMO 16S 2017-03-28, filter fraction:3

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water body (ENVO:01001321)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: mimarks-survey

text: aquatic metagenome

text: aerobic

text: LMO 2016, 2017 (0.2, 3-0.2, 3)

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: LMO 16S 2017-04-12, filter fraction:3

text: water

characteristic: water environmental package


text: LNU

text: public

characteristic: collection date

text: marine pelagic biome (ENVO:01000023)

characteristic: environment (biome)

text: brackish water body (ENVO:01001321)

characteristic: environment (feature)

text: brackish water (ENVO:00002019)

characteristic: environment (material)

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: aquatic metagenome

characteristic: organism

text: aerobic

characteristic: oxygenation status of sample

characteristic: pcr primers

text: LMO 2016, 2017 (0.2, 3-0.2, 3)

characteristic: project name

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

text: LMO 16S 2017-04-27, filter fraction:3

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water body (ENVO:01001321)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: mimarks-survey

text: aquatic metagenome

text: aerobic

text: LMO 2016, 2017 (0.2, 3-0.2, 3)

text: Filter setup: 3

characteristic: sample collection device or method

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: LMO 16S 2017-05-09, filter fraction:3

characteristic: title

text: water


text: Yeast

characteristic: ArrayExpress-PHENOTYPE

text: Saccharomyces cerevisiae

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: baker's yeast

characteristic: common name

text: Saccharomyces cerevisiae

characteristic: organism

text: Yeast

characteristic: phenotype

text: Saccharomyces cerevisiae

characteristic: subject id


text: Yeast

characteristic: ArrayExpress-Phenotype

text: Saccharomyces cerevisiae

characteristic: ArrayExpress-Species

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:INSTITUTE OF APPLIED BIOSCIENCES - CERTH

text: Department of Microbiology, Papanikolaou General Hospital of Thessaloniki

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: description

text: Greece

characteristic: geographic location (country and/or sea)

text: Thessaloniki

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

characteristic: host subject id

text: RNA

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSTITUTE OF APPLIED BIOSCIENCES - CERTH

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

characteristic: common name

text: Greece

text: Thessaloniki

text: human

text: not provided

text: Homo sapiens

text: female

text: RNA

characteristic: organism

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: description

text: Greece

characteristic: geographic location (country and/or sea)

text: Thessaloniki

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: Homo sapiens

text: male

text: RNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: General Hospital of Katerini

text: not provided

text: Greece

text: Katerini

text: human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host subject id

text: RNA

characteristic: isolate

characteristic: sample capture status


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: General Hospital of Katerini

characteristic: collecting institution

text: not provided

characteristic: common name

text: Greece

text: Katerini

text: human

text: not provided

text: Homo sapiens

text: male

text: RNA

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: General Hospital of Serres

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: description

text: Greece

characteristic: geographic location (country and/or sea)

text: Serres

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: Homo sapiens

text: male

text: RNA


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: General Hospital of Xanthi

text: not provided

text: Greece

text: Xanthi

text: human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host subject id

text: RNA

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: General Hospital of Xanthi

characteristic: collecting institution

text: not provided

characteristic: common name

text: Greece

text: Xanthi

text: human

text: not provided

text: Homo sapiens

text: male

text: RNA

characteristic: organism

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: General hospital of Goumenissa

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: description

text: Greece

characteristic: geographic location (country and/or sea)

text: Kilkis

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: Homo sapiens

text: male

text: RNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: General hospital of Goumenissa

text: not provided

text: Greece

text: Kilkis

text: human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host subject id

text: RNA

characteristic: isolate

characteristic: sample capture status


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: University General Hospital of Thessaloniki, AHEPA

characteristic: collecting institution

text: not provided

characteristic: common name

text: Greece

text: Thessaloniki

text: human

text: not provided

text: Homo sapiens

text: female

text: RNA

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: description

text: Greece

characteristic: geographic location (country and/or sea)

text: Chalkidiki

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: Homo sapiens

text: male

text: RNA


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: Greece

text: Thessaloniki

text: human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

characteristic: host subject id

text: RNA

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Department of Microbiology, Medical School, Aristotle University of Thessaloniki, Thessaloniki, Greece

characteristic: collecting institution

text: not provided

characteristic: common name

text: Greece

text: Chalkidiki

text: human

text: not provided

text: Homo sapiens

text: not provided

text: RNA

characteristic: organism

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: description

text: Greece

characteristic: geographic location (country and/or sea)

text: Giannitsa

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: Homo sapiens

text: not provided

text: RNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: not provided

text: Greece

text: Katerini

text: human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

characteristic: host subject id

text: RNA

characteristic: isolate

characteristic: sample capture status


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Laboratory of Molecular Biology, Mamatsio General Hospital of Kozani

characteristic: collecting institution

text: not provided

characteristic: common name

text: Greece

text: Skidra

text: human

text: not provided

text: Homo sapiens

text: male

text: RNA

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: description

text: Greece

characteristic: geographic location (country and/or sea)

text: Kozani

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: Homo sapiens

text: female

text: RNA


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: Greece

text: Grevena

text: human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host subject id

text: RNA

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: not provided

characteristic: common name

text: Greece

text: Aridea

text: human

text: not provided

text: Homo sapiens

text: female

text: RNA

characteristic: organism

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: description

text: Greece

characteristic: geographic location (country and/or sea)

text: Veria

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: Homo sapiens

text: female

text: RNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Theageneio Hospital of Thessaloniki

text: not provided

text: Greece

text: Thessaloniki

text: human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

characteristic: host subject id

text: RNA

characteristic: isolate

characteristic: sample capture status


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Thessaloniki General Hospital G.Gennimatas

characteristic: collecting institution

text: not provided

characteristic: common name

text: Greece

text: Thessaloniki

text: human

text: not provided

text: Homo sapiens

text: female

text: RNA

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: description

text: Greece

characteristic: geographic location (country and/or sea)

text: Thessaloniki

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: Homo sapiens

text: male

text: RNA


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: General Hospital of Serres

text: not provided

text: Greece

text: Serres

text: human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host subject id

text: RNA

characteristic: isolate

characteristic: sample capture status


text: ear

characteristic: ArrayExpress-PHENOTYPE

text: female

characteristic: ArrayExpress-SEX

text: Mus musculus

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

characteristic: common name

text: Female

characteristic: gender

text: Mus musculus

characteristic: organism

text: ear

characteristic: phenotype

text: Mus musculus

characteristic: subject id

characteristic: title


text: oesophagus

text: male

text: Mus musculus

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: house mouse

text: Male

text: Mus musculus

text: oesophagus

text: Mus musculus


text: oesophagus

characteristic: ArrayExpress-PHENOTYPE

text: female

characteristic: ArrayExpress-SEX

text: Mus musculus

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: house mouse

text: Female

text: Mus musculus

text: oesophagus

text: Mus musculus


text: ear

text: male

text: Mus musculus

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: house mouse

text: Male

text: Mus musculus

text: ear

text: Mus musculus


text: Mouse

text: Mus musculus

characteristic: External Id

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: house mouse

text: Mus musculus

text: Mouse

text: Mus musculus


E-MTAB-11722:Sample 1

text: public

text: E-MTAB-11722:Sample 1

tag: Namespace:EMBL Australia node in Single Molecule Science

unit: year

characteristic: age

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: human

characteristic: common name

text: Protocols: Single photoconverted cells were single cell sorted into 96-well PCR plates at 4 degrees celsius containing 4 microlitres lysis buffer as described in Picelli et al 2014 Smart-Seq v4 ultra low input RNA kit as per manufacturer's instructions Nextera XT DNA library prep kit as per manufacturer's instructions

characteristic: description

text: adult

characteristic: developmental stage

text: metastatic melanoma

characteristic: disease

text: BRAF p.Val600Glu (V600E)

characteristic: genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: lymph node

characteristic: organism part

text: epithelial - spheroid edge

text: Homo sapiens

text: male

characteristic: sex

text: Sample 1


E-MTAB-11722:Sample 2

characteristic: ENA-CHECKLIST

text: EMBL Australia node in Single Molecule Science

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11722:Sample 2

text: ArrayExpress

text: human

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

text: epithelial - spheroid edge

characteristic: phenotype

text: Homo sapiens

text: male

text: Sample 2

characteristic: title


E-MTAB-11722:Sample 3

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-11722:Sample 3

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: human

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

text: epithelial - spheroid edge

text: Homo sapiens

text: male

text: Sample 3


E-MTAB-11722:Sample 4

text: public

text: E-MTAB-11722:Sample 4

text: ArrayExpress

characteristic: cell line

text: human

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: metastatic melanoma

characteristic: disease

text: BRAF p.Val600Glu (V600E)

characteristic: genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: lymph node

text: epithelial - spheroid edge

text: Homo sapiens

text: male

text: Sample 4


E-MTAB-11722:Sample 5

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11722:Sample 5

text: ArrayExpress

text: human

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

characteristic: organism part

text: epithelial - spheroid edge

text: Homo sapiens

text: male

characteristic: sex

text: Sample 5


E-MTAB-11722:Sample 6

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-11722:Sample 6

characteristic: Submitter Id

text: ArrayExpress

text: human

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

text: epithelial - spheroid edge

characteristic: phenotype

text: Homo sapiens

text: male

text: Sample 6

characteristic: title


E-MTAB-11722:Sample 7

text: public

text: E-MTAB-11722:Sample 7

characteristic: age

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: human

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: metastatic melanoma

characteristic: disease

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

text: epithelial - spheroid edge

text: Homo sapiens

text: male

text: Sample 7


E-MTAB-11722:Sample 8

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11722:Sample 8

text: ArrayExpress

text: human

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

characteristic: genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: lymph node

text: epithelial - spheroid edge

text: Homo sapiens

text: male

text: Sample 8


E-MTAB-11722:Sample 9

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-11722:Sample 9

characteristic: Submitter Id

text: ArrayExpress

text: human

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

characteristic: organism part

text: epithelial - spheroid edge

text: Homo sapiens

text: male

characteristic: sex

text: Sample 9


E-MTAB-11722:Sample 10

text: public

text: E-MTAB-11722:Sample 10

characteristic: age

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: human

characteristic: common name

characteristic: description

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

text: epithelial - spheroid edge

characteristic: phenotype

text: Homo sapiens

text: male

text: Sample 10

characteristic: title


E-MTAB-11722:Sample 11

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11722:Sample 11

text: ArrayExpress

text: human

text: adult

characteristic: developmental stage

text: metastatic melanoma

characteristic: disease

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

text: escaping

text: Homo sapiens

text: male

text: Sample 11


E-MTAB-11722:Sample 12

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-11722:Sample 12

characteristic: Submitter Id

text: ArrayExpress

text: human

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

characteristic: genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: lymph node

text: escaping

text: Homo sapiens

text: male

text: Sample 12


E-MTAB-11722:Sample 13

text: public

text: E-MTAB-11722:Sample 13

characteristic: age

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: human

characteristic: common name

characteristic: description

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

characteristic: organism part

text: escaping

text: Homo sapiens

text: male

characteristic: sex

text: Sample 13


E-MTAB-11722:Sample 14

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11722:Sample 14

text: ArrayExpress

text: human

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

text: escaping

characteristic: phenotype

text: Homo sapiens

text: male

text: Sample 14

characteristic: title


E-MTAB-11722:Sample 15

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-11722:Sample 15

characteristic: Submitter Id

text: ArrayExpress

text: human

text: adult

characteristic: developmental stage

text: metastatic melanoma

characteristic: disease

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

text: escaping

text: Homo sapiens

text: male

text: Sample 15


E-MTAB-11722:Sample 16

text: public

text: E-MTAB-11722:Sample 16

characteristic: age

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: human

characteristic: common name

characteristic: description

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

characteristic: genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: lymph node

text: escaping

text: Homo sapiens

text: male

text: Sample 16


E-MTAB-11722:Sample 17

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11722:Sample 17

text: ArrayExpress

text: human

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

characteristic: organism part

text: escaping

text: Homo sapiens

text: male

characteristic: sex

text: Sample 17


E-MTAB-11722:Sample 18

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-11722:Sample 18

characteristic: Submitter Id

text: ArrayExpress

text: human

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

text: escaping

characteristic: phenotype

text: Homo sapiens

text: male

text: Sample 18

characteristic: title


E-MTAB-11722:Sample 19

text: public

text: E-MTAB-11722:Sample 19

characteristic: age

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: human

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: metastatic melanoma

characteristic: disease

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

text: escaping

text: Homo sapiens

text: male

text: Sample 19


E-MTAB-11722:Sample 20

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11722:Sample 20

text: ArrayExpress

text: human

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

characteristic: genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: lymph node

text: escaping

text: Homo sapiens

text: male

text: Sample 20


E-MTAB-11722:Sample 21

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-11722:Sample 21

characteristic: Submitter Id

text: ArrayExpress

text: human

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

characteristic: organism part

text: escaping

text: Homo sapiens

text: male

characteristic: sex

text: Sample 21


E-MTAB-11722:Sample 22

text: public

text: E-MTAB-11722:Sample 22

characteristic: age

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: human

characteristic: common name

characteristic: description

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

text: escaping

characteristic: phenotype

text: Homo sapiens

text: male

text: Sample 22

characteristic: title


E-MTAB-11722:Sample 23

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11722:Sample 23

text: ArrayExpress

text: human

text: adult

characteristic: developmental stage

text: metastatic melanoma

characteristic: disease

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

text: amoeboid - invading

text: Homo sapiens

text: male

text: Sample 23


E-MTAB-11722:Sample 24

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-11722:Sample 24

characteristic: Submitter Id

text: ArrayExpress

text: human

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

characteristic: genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: lymph node

text: amoeboid - invading

text: Homo sapiens

text: male

text: Sample 24


E-MTAB-11722:Sample 25

text: public

text: E-MTAB-11722:Sample 25

characteristic: age

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: human

characteristic: common name

characteristic: description

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

characteristic: organism part

text: amoeboid - invading

text: Homo sapiens

text: male

characteristic: sex

text: Sample 25


E-MTAB-11722:Sample 26

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11722:Sample 26

text: ArrayExpress

text: human

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

text: amoeboid - invading

characteristic: phenotype

text: Homo sapiens

text: male

text: Sample 26

characteristic: title


E-MTAB-11722:Sample 27

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-11722:Sample 27

characteristic: Submitter Id

text: ArrayExpress

text: human

text: adult

characteristic: developmental stage

text: metastatic melanoma

characteristic: disease

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

text: amoeboid - invading

text: Homo sapiens

text: male

text: Sample 27


E-MTAB-11722:Sample 28

text: public

text: E-MTAB-11722:Sample 28

characteristic: age

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: human

characteristic: common name

characteristic: description

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

characteristic: genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: lymph node

text: amoeboid - invading

text: Homo sapiens

text: male

text: Sample 28


E-MTAB-11722:Sample 29

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11722:Sample 29

text: ArrayExpress

text: human

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

characteristic: organism part

text: amoeboid - invading

text: Homo sapiens

text: male

characteristic: sex

text: Sample 29


E-MTAB-11722:Sample 30

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-11722:Sample 30

characteristic: Submitter Id

text: ArrayExpress

text: human

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

text: amoeboid - invading

characteristic: phenotype

text: Homo sapiens

text: male

text: Sample 30

characteristic: title


E-MTAB-11722:Sample 31

text: public

text: E-MTAB-11722:Sample 31

characteristic: age

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: human

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: metastatic melanoma

characteristic: disease

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

text: amoeboid - invading

text: Homo sapiens

text: male

text: Sample 31


E-MTAB-11722:Sample 32

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11722:Sample 32

text: ArrayExpress

text: human

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

characteristic: genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: lymph node

text: amoeboid - invading

text: Homo sapiens

text: male

text: Sample 32


E-MTAB-11722:Sample 33

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-11722:Sample 33

characteristic: Submitter Id

text: ArrayExpress

text: human

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

characteristic: organism part

text: amoeboid - invading

text: Homo sapiens

text: male

characteristic: sex

text: Sample 33


E-MTAB-11722:Sample 34

text: public

text: E-MTAB-11722:Sample 34

characteristic: age

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: human

characteristic: common name

characteristic: description

text: adult

text: metastatic melanoma

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

text: amoeboid - invading

characteristic: phenotype

text: Homo sapiens

text: male

text: Sample 34

characteristic: title


E-MTAB-11722:Sample 35

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11722:Sample 35

text: ArrayExpress

text: human

text: adult

characteristic: developmental stage

text: metastatic melanoma

characteristic: disease

text: BRAF p.Val600Glu (V600E)

text: Homo sapiens

text: Homo sapiens

text: lymph node

text: amoeboid - invading

text: Homo sapiens

text: male

text: Sample 35


E-MTAB-11719:D20_KO_Replate 1

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-11719:D20_KO_Replate 1

tag: Namespace:Division of Genetics and Genomics, Institute for Molecular Bioscience, The University of Queensland

characteristic: Submitter Id

text: ArrayExpress

text: CRISPRi Gen1C 5

text: cardiomyocyte

characteristic: cell type

text: human

text: Protocols: One day in advance of lentiviral transduction, hiPSC-derived cardiomyocytes (15 days post-activation) were replated into a 6wp at 2.083 × 104 cells/cm2. Day 16 cardiomyocytes were transduced one day after replating using spinfection with polybrene and incubated in transduction media for 72 hours. Day 20 cardiomyocytes were washed twice with PBS and harvested for RNA isolation. All human pluripotent stem cell studies were carried out in accordance with consent from the University of Queensland’s Institutional Human Research Ethics approval (HREC#: 2015001434). WTC CRISPRi GCaMP hiPSCs (Karyotype: 46, XY; RRID CVCL_VM38), generously provided by M. Mandegar and B. Conklin (UCSF, Gladstone Institute), was generated using a previously described protocol (Mandegar et al., 2016). WTC CRISPRi HOPX g1 (XY; RRID CVCL_VQ27) hiPSCs were generated in a previous study (Friedman et al., 2018). All cells were maintained as previously described with slight adaptions (Friedman et al., 2018; Palpant et al., 2017b). Briefly, cells were maintained in mTeSR Plus media with supplement (Stem Cell Technologies, Cat.#05825) at 37°C with 5% CO2. All WTC CRISPRi and WTC CRISPRi HOPX g1 hiPSC lines were maintained on Vitronectin XF (Stem Cell Technologies, Cat.#07180) coated plates Total RNA extraction using Qiagen RNEasy kit (cat no 74106) and Qiagen DNase (cat no 79254) and followed standard isolation procedures. Library preparation was performed by the Genome Innovation Hub (GIH) and Nguyen’s Lab at the Institute for Molecular Bioscienceusing the DNAFORM commercial CAGE preparation user guide with the addition of a qPCR quantification step to normalize input for pooling before second strand synthesis.

text: adult

text: normal

text: CRISPR/Cas9 knockdown of HOX1

characteristic: genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: skin

text: induced pluripotent stem cell

characteristic: progenitor cell type

text: Homo sapiens

text: D20_KO_Replate 1


E-MTAB-11719:D20_KO_Replate 2

text: Division of Genetics and Genomics, Institute for Molecular Bioscience, The University of Queensland

text: public

text: E-MTAB-11719:D20_KO_Replate 2

text: ArrayExpress

characteristic: broker name

text: CRISPRi Gen1C 5

characteristic: cell line

text: cardiomyocyte

text: human

characteristic: common name

characteristic: description

text: adult

text: normal

text: CRISPR/Cas9 knockdown of HOX1

text: Homo sapiens

text: Homo sapiens

text: skin

characteristic: organism part

text: induced pluripotent stem cell

text: Homo sapiens

text: D20_KO_Replate 2

characteristic: title


E-MTAB-11719:D20_KO_Replate 3

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11719:D20_KO_Replate 3

text: ArrayExpress

text: CRISPRi Gen1C 5

text: cardiomyocyte

text: human

text: adult

characteristic: developmental stage

text: normal

text: CRISPR/Cas9 knockdown of HOX1

text: Homo sapiens

text: Homo sapiens

text: skin

text: induced pluripotent stem cell

text: Homo sapiens

text: D20_KO_Replate 3


E-MTAB-11719:D20Replate 1

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-11719:D20Replate 1

characteristic: Submitter Id

text: ArrayExpress

text: CRISPRi Gen1C 5

text: cardiomyocyte

text: human

text: adult

text: normal

characteristic: disease

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: skin

text: induced pluripotent stem cell

text: Homo sapiens

text: D20Replate 1


E-MTAB-11719:D20Replate 2

text: public

text: E-MTAB-11719:D20Replate 2

text: ArrayExpress

characteristic: broker name

text: CRISPRi Gen1C 5

characteristic: cell line

text: cardiomyocyte

characteristic: cell type

text: human

text: adult

text: normal

text: wild type genotype

characteristic: genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: skin

text: induced pluripotent stem cell

characteristic: progenitor cell type

text: Homo sapiens

text: D20Replate 2


E-MTAB-11719:D20Replate 3

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

text: E-MTAB-11719:D20Replate 3

text: ArrayExpress

text: CRISPRi Gen1C 5

text: cardiomyocyte

text: human

characteristic: common name

characteristic: description

text: adult

text: normal

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: skin

characteristic: organism part

text: induced pluripotent stem cell

text: Homo sapiens

text: D20Replate 3

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Anthony Smith, NICD

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Anthony Smith, NICD

text: EnteroBase

text: EnteroBase

text: A. Smith, National Institute for Communicable Diseases

characteristic: collected by

characteristic: collection date

text: Whole genome sequencing data uploaded by EnteroBase user

text: South Africa, Free State

characteristic: geographic location

text: Human, Stool

characteristic: isolation source

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis

characteristic: serovar

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Anthony Smith, NICD

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: EnteroBase

characteristic: broker name

text: EnteroBase

text: South Africa, Western Cape

text: Human, Stool

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Typhimurium


characteristic: ENA-FIRST-PUBLIC

text: Anthony Smith, NICD

characteristic: INSDC center name

text: public

text: EnteroBase

text: EnteroBase

characteristic: description

text: South Africa, Western Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Newport

characteristic: title


characteristic: ENA-LAST-UPDATE

text: Anthony Smith, NICD

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: EnteroBase

text: EnteroBase

text: South Africa, Western Cape

text: Human, Other

text: Salmonella enterica

text: Salmonella enterica

text: Typhimurium


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

characteristic: collected by

characteristic: collection date

text: South Africa, Eastern Cape

characteristic: geographic location

text: Human, Blood culture

characteristic: isolation source

text: Salmonella enterica

text: Salmonella enterica

text: Typhimurium


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Gauteng

text: Human, Other

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis

characteristic: serovar

characteristic: strain


text: Anthony Smith, NICD

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: EnteroBase

characteristic: broker name

text: EnteroBase

text: South Africa, Western Cape

text: Human, Blood culture

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Enteritidis


characteristic: ENA-FIRST-PUBLIC

text: Anthony Smith, NICD

characteristic: INSDC center name

text: public

text: EnteroBase

text: EnteroBase

characteristic: description

text: South Africa, Eastern Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: sub species Salamae

characteristic: title


characteristic: ENA-LAST-UPDATE

text: Anthony Smith, NICD

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: EnteroBase

text: EnteroBase

text: South Africa, Western Cape

text: Human, Other

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

characteristic: collected by

characteristic: collection date

text: South Africa, Free State

characteristic: geographic location

text: Human, Stool

characteristic: isolation source

text: Salmonella enterica

text: Salmonella enterica

text: Typhimurium


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Gauteng

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis

characteristic: serovar

characteristic: strain


text: Anthony Smith, NICD

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: EnteroBase

characteristic: broker name

text: EnteroBase

text: South Africa, Gauteng

text: Human, Rectal swab

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Paratyphi A


characteristic: ENA-FIRST-PUBLIC

text: Anthony Smith, NICD

characteristic: INSDC center name

text: public

text: EnteroBase

text: EnteroBase

characteristic: description

text: South Africa, Gauteng

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis

characteristic: title


characteristic: ENA-LAST-UPDATE

text: Anthony Smith, NICD

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: EnteroBase

text: EnteroBase

text: South Africa, Western Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Chester


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

characteristic: collected by

characteristic: collection date

text: South Africa, Eastern Cape

characteristic: geographic location

text: Human, Stool

characteristic: isolation source

text: Salmonella enterica

text: Salmonella enterica


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Eastern Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Typhimurium

characteristic: serovar

characteristic: strain


text: Anthony Smith, NICD

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: EnteroBase

characteristic: broker name

text: EnteroBase

text: South Africa, Western Cape

text: Human, Stool

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Enteritidis


characteristic: ENA-FIRST-PUBLIC

text: Anthony Smith, NICD

characteristic: INSDC center name

text: public

text: EnteroBase

text: EnteroBase

characteristic: description

text: South Africa, Gauteng

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Typhimurium

characteristic: title


characteristic: ENA-LAST-UPDATE

text: Anthony Smith, NICD

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: EnteroBase

text: EnteroBase

text: South Africa, Mpumalanga

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

characteristic: collected by

characteristic: collection date

text: South Africa, Eastern Cape

characteristic: geographic location

text: Human, Blood culture

characteristic: isolation source

text: Salmonella enterica

text: Salmonella enterica

text: Typhi


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Limpopo

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis

characteristic: serovar

characteristic: strain


text: Anthony Smith, NICD

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: EnteroBase

characteristic: broker name

text: EnteroBase

text: South Africa, Gauteng

text: Human, Other

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Typhimurium


characteristic: ENA-FIRST-PUBLIC

text: Anthony Smith, NICD

characteristic: INSDC center name

text: public

text: EnteroBase

text: EnteroBase

characteristic: description

text: South Africa, Limpopo

text: Human, Urine

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis

characteristic: title


characteristic: ENA-LAST-UPDATE

text: Anthony Smith, NICD

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: EnteroBase

text: EnteroBase

text: South Africa, KwaZulu-Natal

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Elisabethville


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

characteristic: collected by

characteristic: collection date

text: South Africa, Western Cape

characteristic: geographic location

text: Human, Stool

characteristic: isolation source

text: Salmonella enterica

text: Salmonella enterica

text: Newport


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Michael Smith Genome Sciences Centre

text: public

tag: Namespace:Michael Smith Genome Sciences Centre

characteristic: cell type

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: tissue type


name: IAM.5 Ancient North African Early Neolithic sample from Ifri n’Amr o’Moussa site (6100 ± 30 BP)

characteristic: ENA-FIRST-PUBLIC

text: Open Genomes

text: public

characteristic: SRA accession

tag: Namespace:Open Genomes

characteristic: Submitter Id

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: male

characteristic: sex


characteristic: ENA-LAST-UPDATE

text: University clinic Duesseldorf

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:University clinic Duesseldorf

text: ZOTZ KLIMAS MVZ Düsseldorf-Centrum GbR ÜBAG für Labormedizin, Genetik, Zytologie, Pathologie

characteristic: collecting institution

text: not collected

characteristic: collector name

text: Germany

characteristic: geographic location (country and/or sea)

text: Northrhine Westphalia; Duesseldorf metropolitan area

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not collected

characteristic: host health state

text: homo sapien

characteristic: host scientific name

text: not collected

characteristic: host sex

characteristic: host subject id

characteristic: isolate

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: University clinic Duesseldorf

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Center of Medical Microbiology, Virology, and Hospital Hygiene, University of Duesseldorf

characteristic: collection date

text: not collected

text: Germany

text: human

text: not collected

text: homo sapien

text: not collected


characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:Regional Public Health Authority with the seat in Trenčín, Slovakia

text: Science Park of Comenius University of Bratislava

characteristic: broker name

characteristic: collecting institution

text: not provided

characteristic: collector name

characteristic: common name

text: Slovakia

characteristic: geographic location (country and/or sea)

characteristic: host age

text: Human

text: not provided

text: Homo sapiens

text: male

text: RNA

text: Nasopharyngeal swab

characteristic: isolation source-host associated

characteristic: organism

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: Regional Public Health Authority with the seat in Trenčín, Slovakia

characteristic: INSDC last update

text: public

text: not provided

text: Slovakia

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: RNA

characteristic: isolate

text: Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2


characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Slovakia

text: Human

text: not provided

text: Homo sapiens

text: female

text: RNA

text: Nasopharyngeal swab

text: active surveillance in response to outbreak


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CN-NVRL-S22IRL00289798/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Cavan

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CN-NVRL-G22IRL24421/2022


characteristic: ENA-FIRST-PUBLIC

text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-M21IRL01824245/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Cork

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CO-NVRL-S22IRL00311855/2022


characteristic: ENA-FIRST-PUBLIC

text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: female

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00290518/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00291115/2022


characteristic: ENA-FIRST-PUBLIC

text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00290685/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00291122/2022


characteristic: ENA-FIRST-PUBLIC

text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: male

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

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