characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Intestine

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Candidatus Saccharibacteria bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina MiSeq

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Candidatus Saccharibacteria;c__;o__;f__;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17382106_bin.33_metaWRAP_v1.3_MAG

characteristic: title


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR17382106 of study SRP352908.

characteristic: description

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: not provided

unit: DD

text: not provided

text: metagenome-assembled genome

text: pig gut metagenome

text: Intestine

text: pig gut metagenome

text: uncultured Clostridia bacterium

text: In the current study, we compared the microbial community, functions and metabolites between healthy weaned piglets (group H, n = 7) and piglets with post-weaning diarrhea (group D, n = 7), in order to find out diarrhea associated microbial markers.

text: uncultured Clostridia bacterium

text: Illumina MiSeq

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR17382106_bin.35_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Intestine

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina MiSeq

characteristic: sequencing method

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17382106_bin.37_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: pig gut metagenome

text: Intestine

text: pig gut metagenome

text: uncultured Clostridium sp.

text: uncultured Clostridium sp.

text: Illumina MiSeq

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR17382106_bin.38_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Intestine

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Tenericutes bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Tenericutes bacterium

text: Illumina MiSeq

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Tenericutes;c__;o__;f__;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17382106_bin.4_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: pig gut metagenome

text: Intestine

text: pig gut metagenome

text: uncultured Bacteroidales bacterium

text: uncultured Bacteroidales bacterium

text: Illumina MiSeq

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__;g__;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR17382106_bin.40_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Intestine

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina MiSeq

characteristic: sequencing method

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17382106_bin.43_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: pig gut metagenome

text: Intestine

text: pig gut metagenome

text: Enterococcus hirae

text: Enterococcus hirae

text: Illumina MiSeq

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus hirae

text: multi-marker approach

text: Metagenome-assembled genome: SRR17382106_bin.45_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Intestine

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Bacteroidales bacterium

text: Illumina MiSeq

characteristic: sequencing method

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17382106_bin.46_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: pig gut metagenome

text: Intestine

text: pig gut metagenome

text: Dorea longicatena

text: Dorea longicatena

text: Illumina MiSeq

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Dorea;s__Dorea longicatena

text: multi-marker approach

text: Metagenome-assembled genome: SRR17382106_bin.49_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR17382106 of study SRP352908.

text: Feces

characteristic: environmental medium

text: China

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Intestine

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: organism

text: In the current study, we compared the microbial community, functions and metabolites between healthy weaned piglets (group H, n = 7) and piglets with post-weaning diarrhea (group D, n = 7), in order to find out diarrhea associated microbial markers.

characteristic: project name

characteristic: sample derived from

text: uncultured Bacteroidales bacterium

text: Illumina MiSeq

characteristic: sequencing method

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17382106_bin.5_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: pig gut metagenome

text: Intestine

text: pig gut metagenome

text: uncultured Oscillibacter sp.

text: uncultured Oscillibacter sp.

text: Illumina MiSeq

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Oscillospiraceae;g__Oscillibacter;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR17382106_bin.6_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Intestine

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina MiSeq

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17382106_bin.9_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR17382107 of study SRP352908.

characteristic: description

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: pig gut metagenome

text: Intestine

text: pig gut metagenome

text: uncultured Fibrobacter sp.

text: uncultured Fibrobacter sp.

text: Illumina MiSeq

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Fibrobacteres;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR17382107_bin.10_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Intestine

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Roseburia sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Roseburia sp.

text: Illumina MiSeq

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Roseburia;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17382107_bin.11_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: pig gut metagenome

text: Intestine

text: pig gut metagenome

text: uncultured Clostridia bacterium

text: uncultured Clostridia bacterium

text: Illumina MiSeq

text: multi-marker approach

text: Metagenome-assembled genome: SRR17382107_bin.12_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

text: public

text: metaSPAdes v3.15.3

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Intestine

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Bacteroidales bacterium

text: Illumina MiSeq

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17382107_bin.13_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: pig gut metagenome

text: Intestine

text: pig gut metagenome

text: uncultured Ruminococcus sp.

text: uncultured Ruminococcus sp.

text: Illumina MiSeq

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminococcus;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR17382107_bin.15_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Intestine

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: organism

text: In the current study, we compared the microbial community, functions and metabolites between healthy weaned piglets (group H, n = 7) and piglets with post-weaning diarrhea (group D, n = 7), in order to find out diarrhea associated microbial markers.

characteristic: project name

characteristic: sample derived from

text: uncultured Bacteroidales bacterium

text: Illumina MiSeq

characteristic: sequencing method

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17382107_bin.21_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: pig gut metagenome

text: Intestine

text: pig gut metagenome

text: uncultured Clostridium sp.

text: uncultured Clostridium sp.

text: Illumina MiSeq

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR17382107_bin.23_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Intestine

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Prevotellaceae bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Prevotellaceae bacterium

text: Illumina MiSeq

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17382107_bin.24_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR17382107 of study SRP352908.

characteristic: description

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: pig gut metagenome

text: Intestine

text: pig gut metagenome

text: uncultured Faecalibacterium sp.

text: uncultured Faecalibacterium sp.

text: Illumina MiSeq

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Faecalibacterium;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR17382107_bin.25_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Intestine

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina MiSeq

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17382107_bin.28_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: pig gut metagenome

text: Intestine

text: pig gut metagenome

text: uncultured Clostridia bacterium

text: uncultured Clostridia bacterium

text: Illumina MiSeq

text: multi-marker approach

text: Metagenome-assembled genome: SRR17382107_bin.3_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Intestine

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Bacteroidales bacterium

text: Illumina MiSeq

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17382107_bin.33_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: pig gut metagenome

text: Intestine

text: pig gut metagenome

text: uncultured Oribacterium sp.

text: uncultured Oribacterium sp.

text: Illumina MiSeq

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Oribacterium;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR17382107_bin.34_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Intestine

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: Lactobacillus johnsonii

characteristic: organism

text: In the current study, we compared the microbial community, functions and metabolites between healthy weaned piglets (group H, n = 7) and piglets with post-weaning diarrhea (group D, n = 7), in order to find out diarrhea associated microbial markers.

characteristic: project name

characteristic: sample derived from

text: Lactobacillus johnsonii

text: Illumina MiSeq

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus johnsonii

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17382107_bin.35_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: pig gut metagenome

text: Intestine

text: pig gut metagenome

text: uncultured Bacteroidales bacterium

text: uncultured Bacteroidales bacterium

text: Illumina MiSeq

text: multi-marker approach

text: Metagenome-assembled genome: SRR17382107_bin.36_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Intestine

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Bacteroidales bacterium

text: Illumina MiSeq

characteristic: sequencing method

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17382107_bin.40_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR17382107 of study SRP352908.

characteristic: description

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: pig gut metagenome

text: Intestine

text: pig gut metagenome

text: uncultured Bacteroides sp.

text: uncultured Bacteroides sp.

text: Illumina MiSeq

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR17382107_bin.42_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Intestine

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Streptococcus sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Streptococcus sp.

text: Illumina MiSeq

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17382107_bin.45_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: pig gut metagenome

text: Intestine

text: pig gut metagenome

text: uncultured Bacteroides sp.

text: uncultured Bacteroides sp.

text: Illumina MiSeq

text: multi-marker approach

text: Metagenome-assembled genome: SRR17382107_bin.49_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Intestine

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroides sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Bacteroides sp.

text: Illumina MiSeq

characteristic: sequencing method

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17382107_bin.5_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: pig gut metagenome

text: Intestine

text: pig gut metagenome

text: uncultured Prevotella sp.

text: uncultured Prevotella sp.

text: Illumina MiSeq

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR17382107_bin.51_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Intestine

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina MiSeq

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17382107_bin.53_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: pig gut metagenome

text: Intestine

text: pig gut metagenome

text: Streptococcus hyointestinalis

text: In the current study, we compared the microbial community, functions and metabolites between healthy weaned piglets (group H, n = 7) and piglets with post-weaning diarrhea (group D, n = 7), in order to find out diarrhea associated microbial markers.

text: Streptococcus hyointestinalis

text: Illumina MiSeq

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus hyointestinalis

text: multi-marker approach

text: Metagenome-assembled genome: SRR17382107_bin.57_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Intestine

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Faecalibacterium sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Faecalibacterium sp.

text: Illumina MiSeq

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Faecalibacterium;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17382107_bin.6_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR17382107 of study SRP352908.

characteristic: description

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: pig gut metagenome

text: Intestine

text: pig gut metagenome

text: uncultured Prevotella sp.

text: uncultured Prevotella sp.

text: Illumina MiSeq

text: multi-marker approach

text: Metagenome-assembled genome: SRR17382107_bin.60_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Intestine

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina MiSeq

characteristic: sequencing method

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17382107_bin.61_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: pig gut metagenome

text: Intestine

text: pig gut metagenome

text: uncultured Lachnospiraceae bacterium

text: uncultured Lachnospiraceae bacterium

text: Illumina MiSeq

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR17382107_bin.7_metaWRAP_v1.3_MAG


Genomic illumina PE

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: Genomic illumina PE

tag: Namespace:Australian Centre for Ecogenomics, School of Chemistry and Molecular Biosciences, University of Queensland

text: Genomic DNA derived from Prorocentrum cordatum CCMP1329 axenic cell culture for paired-end library construction, for Illumina sequencing.

text: Prorocentrum cordatum

characteristic: organism

text: Prorocentrum cordatum

text: Prorocentrum cordatum CCMP1329 genomic DNA Illumina PE

characteristic: title


Genomic PacBio Sequel CLR

text: Australian Centre for Ecogenomics, School of Chemistry and Molecular Biosciences, University of Queensland

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Genomic PacBio Sequel CLR

characteristic: Submitter Id

text: Genomic DNA derived from Prorocentrum cordatum CCMP1329 axenic cell culture for a SMRTbell library sequenced on the PacBio Sequel platform.

text: Prorocentrum cordatum

text: Prorocentrum cordatum

text: Prorocentrum cordatum CCMP1329 genomic DNA PacBio SMRT Sequel CLR


Genomic PacBio Sequel II CLR

text: public

text: Genomic PacBio Sequel II CLR

text: Prorocentrum cordatum

text: Prorocentrum cordatum

text: Prorocentrum cordatum CCMP1329 genomic DNA PacBio SMRT Sequel II CLR


RNA-Seq PE 20C Exponential sample A

text: public

text: RNA-Seq PE 20C Exponential sample A

text: Total RNA derived from Prorocentrum cordatum CCMP1329 axenic cell culture grown at 20C at exponential phase, replicate 1, for paired-end library construction for Illumina RNA-Seq sequencing.

text: Prorocentrum cordatum

text: Prorocentrum cordatum

text: Prorocentrum cordatum CCMP1329 RNA-Seq PE 20C Exponential sample A


RNA-Seq PE 20C Exponential sample B

text: public

text: RNA-Seq PE 20C Exponential sample B

text: Total RNA derived from Prorocentrum cordatum CCMP1329 axenic cell culture grown at 20C at exponential phase, replicate 2, for paired-end library construction for Illumina RNA-Seq sequencing.

text: Prorocentrum cordatum

text: Prorocentrum cordatum

text: Prorocentrum cordatum CCMP1329 RNA-Seq PE 20C Exponential sample B


RNA-Seq PE 20C Exponential sample C

text: public

text: RNA-Seq PE 20C Exponential sample C

text: Total RNA derived from Prorocentrum cordatum CCMP1329 axenic cell culture grown at 20C at exponential phase, replicate 3, for paired-end library construction for Illumina RNA-Seq sequencing.

text: Prorocentrum cordatum

text: Prorocentrum cordatum

text: Prorocentrum cordatum CCMP1329 RNA-Seq PE 20C Exponential sample C


RNA-Seq PE 26C Exponential sample A

text: public

text: RNA-Seq PE 26C Exponential sample A

text: Total RNA derived from Prorocentrum cordatum CCMP1329 axenic cell culture grown at 26C at exponential phase, replicate 1, for paired-end library construction for Illumina RNA-Seq sequencing.

text: Prorocentrum cordatum

text: Prorocentrum cordatum

text: Prorocentrum cordatum CCMP1329 RNA-Seq PE 26C Exponential sample A


RNA-Seq PE 26C Exponential sample B

text: public

text: RNA-Seq PE 26C Exponential sample B

text: Total RNA derived from Prorocentrum cordatum CCMP1329 axenic cell culture grown at 26C at exponential phase, replicate 2, for paired-end library construction for Illumina RNA-Seq sequencing.

text: Prorocentrum cordatum

text: Prorocentrum cordatum

text: Prorocentrum cordatum CCMP1329 RNA-Seq PE 26C Exponential sample B


RNA-Seq PE 26C Exponential sample C

text: public

text: RNA-Seq PE 26C Exponential sample C

text: Total RNA derived from Prorocentrum cordatum CCMP1329 axenic cell culture grown at 26C at exponential phase, replicate 3, for paired-end library construction for Illumina RNA-Seq sequencing.

text: Prorocentrum cordatum

text: Prorocentrum cordatum

text: Prorocentrum cordatum CCMP1329 RNA-Seq PE 26C Exponential sample C


RNA-Seq PE 30C Exponential sample A

text: public

text: RNA-Seq PE 30C Exponential sample A

text: Total RNA derived from Prorocentrum cordatum CCMP1329 axenic cell culture grown at 30C at exponential phase, replicate 1, for paired-end library construction for Illumina RNA-Seq sequencing.

text: Prorocentrum cordatum

text: Prorocentrum cordatum

text: Prorocentrum cordatum CCMP1329 RNA-Seq PE 30C Exponential sample A


RNA-Seq PE 30C Exponential sample B

text: Australian Centre for Ecogenomics, School of Chemistry and Molecular Biosciences, University of Queensland

text: public

text: RNA-Seq PE 30C Exponential sample B

text: Total RNA derived from Prorocentrum cordatum CCMP1329 axenic cell culture grown at 30C at exponential phase, replicate 2, for paired-end library construction for Illumina RNA-Seq sequencing.

text: Prorocentrum cordatum

text: Prorocentrum cordatum

text: Prorocentrum cordatum CCMP1329 RNA-Seq PE 30C Exponential sample B


RNA-Seq PE 30C Exponential sample C

text: public

text: RNA-Seq PE 30C Exponential sample C

text: Total RNA derived from Prorocentrum cordatum CCMP1329 axenic cell culture grown at 30C at exponential phase, replicate 3, for paired-end library construction for Illumina RNA-Seq sequencing.

text: Prorocentrum cordatum

text: Prorocentrum cordatum

text: Prorocentrum cordatum CCMP1329 RNA-Seq PE 30C Exponential sample C


RNA-Seq PE 20C Stationary sample A

text: public

text: RNA-Seq PE 20C Stationary sample A

text: Total RNA derived from Prorocentrum cordatum CCMP1329 axenic cell culture grown at 20C at stationary phase, replicate 1, for paired-end library construction for Illumina RNA-Seq sequencing.

text: Prorocentrum cordatum

text: Prorocentrum cordatum

text: Prorocentrum cordatum CCMP1329 RNA-Seq PE 20C Stationary sample A


RNA-Seq PE 20C Stationary sample B

text: public

text: RNA-Seq PE 20C Stationary sample B

text: Total RNA derived from Prorocentrum cordatum CCMP1329 axenic cell culture grown at 20C at stationary phase, replicate 2, for paired-end library construction for Illumina RNA-Seq sequencing.

text: Prorocentrum cordatum

text: Prorocentrum cordatum

text: Prorocentrum cordatum CCMP1329 RNA-Seq PE 20C Stationary sample B


RNA-Seq PE 20C Stationary sample C

text: public

text: RNA-Seq PE 20C Stationary sample C

text: Total RNA derived from Prorocentrum cordatum CCMP1329 axenic cell culture grown at 20C at stationary phase, replicate 3, for paired-end library construction for Illumina RNA-Seq sequencing.

text: Prorocentrum cordatum

text: Prorocentrum cordatum

text: Prorocentrum cordatum CCMP1329 RNA-Seq PE 20C Stationary sample C


RNA-Seq PE 26C Stationary sample A

text: public

text: RNA-Seq PE 26C Stationary sample A

text: Total RNA derived from Prorocentrum cordatum CCMP1329 axenic cell culture grown at 26C at stationary phase, replicate 1, for paired-end library construction for Illumina RNA-Seq sequencing.

text: Prorocentrum cordatum

text: Prorocentrum cordatum

text: Prorocentrum cordatum CCMP1329 RNA-Seq PE 26C Stationary sample A


RNA-Seq PE 26C Stationary sample B

text: public

text: RNA-Seq PE 26C Stationary sample B

text: Total RNA derived from Prorocentrum cordatum CCMP1329 axenic cell culture grown at 26C at stationary phase, replicate 2, for paired-end library construction for Illumina RNA-Seq sequencing.

text: Prorocentrum cordatum

text: Prorocentrum cordatum

text: Prorocentrum cordatum CCMP1329 RNA-Seq PE 26C Stationary sample B


RNA-Seq PE 26C Stationary sample C

text: public

text: RNA-Seq PE 26C Stationary sample C

text: Total RNA derived from Prorocentrum cordatum CCMP1329 axenic cell culture grown at 26C at stationary phase, replicate 3, for paired-end library construction for Illumina RNA-Seq sequencing.

text: Prorocentrum cordatum

text: Prorocentrum cordatum

text: Prorocentrum cordatum CCMP1329 RNA-Seq PE 26C Stationary sample C


RNA-Seq PE 30C Stationary sample A

text: Australian Centre for Ecogenomics, School of Chemistry and Molecular Biosciences, University of Queensland

text: public

text: RNA-Seq PE 30C Stationary sample A

text: Total RNA derived from Prorocentrum cordatum CCMP1329 axenic cell culture grown at 30C at stationary phase, replicate 1, for paired-end library construction for Illumina RNA-Seq sequencing.

text: Prorocentrum cordatum

text: Prorocentrum cordatum

text: Prorocentrum cordatum CCMP1329 RNA-Seq PE 30C Stationary sample A


RNA-Seq PE 30C Stationary sample B

text: public

text: RNA-Seq PE 30C Stationary sample B

text: Total RNA derived from Prorocentrum cordatum CCMP1329 axenic cell culture grown at 30C at stationary phase, replicate 2, for paired-end library construction for Illumina RNA-Seq sequencing.

text: Prorocentrum cordatum

text: Prorocentrum cordatum

text: Prorocentrum cordatum CCMP1329 RNA-Seq PE 30C Stationary sample B


RNA-Seq PE 30C Stationary sample C

text: public

text: RNA-Seq PE 30C Stationary sample C

text: Total RNA derived from Prorocentrum cordatum CCMP1329 axenic cell culture grown at 30C at stationary phase, replicate 3, for paired-end library construction for Illumina RNA-Seq sequencing.

text: Prorocentrum cordatum

text: Prorocentrum cordatum

text: Prorocentrum cordatum CCMP1329 RNA-Seq PE 30C Stationary sample C


text: public

tag: Namespace:West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: Scotland

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


E-MTAB-11954:Sample 104

text: PB

characteristic: Blast % by Flow cytometry

text: No

characteristic: CRLF2 expression

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: No

characteristic: IGH rearranmgment by FISH

text: City of Hope National Medical Center

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11954:Sample 104

tag: Namespace:City of Hope National Medical Center

text: ArrayExpress

text: human

characteristic: common name

text: Protocols: Blood: EDTA. 3 ml minimum, 6ml preferred Bone Marrow: 3 ml minimum, 6ml preferred FFPE: FFPE Block designated by the molecular pathologist, which is not exposed to any de-calcifying solutions. Or 1 H&E and 15 USS(unstained slides 10uM thickness) Not Applicable Growth protocol is not applicable Not Applicable Blood and Bone Marrow:Qiagen RNeasy Mini Kit FFPE: Total Nucleic Acid FFPE Tissue Extraction-Agencourt FormaPure Archer FusionPlex protocol for Ion Torrent

characteristic: description

text: adult acute lymphoblastic leukemia

characteristic: disease

text: White

characteristic: ethnic group

text: no fusions detected

characteristic: genotype

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

characteristic: organism part

text: Other

characteristic: ph like

text: Homo sapiens

text: male

characteristic: sex

text: Sample 104

characteristic: title


E-MTAB-11954:Sample 105

text: PB

characteristic: Blast % by Flow cytometry

text: No

characteristic: CRLF2 expression

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: No

characteristic: IGH rearranmgment by FISH

text: City of Hope National Medical Center

text: public

text: E-MTAB-11954:Sample 105

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: human

text: adult acute lymphoblastic leukemia

text: White

text: no fusions detected

text: Homo sapiens

text: Homo sapiens

text: blood

text: Other

text: Homo sapiens

text: male

text: Sample 105


E-MTAB-11954:Sample 106

text: No

text: No

text: City of Hope National Medical Center

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11954:Sample 106

text: ArrayExpress

text: human

characteristic: common name

characteristic: description

text: adult acute lymphoblastic leukemia

characteristic: disease

text: White

characteristic: ethnic group

text: no fusions detected

text: Homo sapiens

text: Homo sapiens

text: blood

text: Other

text: Homo sapiens

text: male

text: Sample 106


E-MTAB-11954:Sample 60

characteristic: Blast % by Flow cytometry

text: No

characteristic: CRLF2 expression

text: No

text: City of Hope National Medical Center

text: public

text: E-MTAB-11954:Sample 60

text: ArrayExpress

text: human

text: adult acute lymphoblastic leukemia

text: Hispanic

characteristic: genotype

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

characteristic: organism part

text: Other

characteristic: ph like

text: Homo sapiens

text: male

characteristic: sex

text: Sample 60

characteristic: title


E-MTAB-11954:Sample 101

text: No

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: No

characteristic: IGH rearranmgment by FISH

text: City of Hope National Medical Center

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11954:Sample 101

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: human

text: adult acute lymphoblastic leukemia

text: Hispanic

text: no fusions detected

text: Homo sapiens

text: Homo sapiens

text: blood

text: Other

text: Homo sapiens

text: female

text: Sample 101


E-MTAB-11954:Sample 102

text: PB

characteristic: Blast % by Flow cytometry

text: No

characteristic: CRLF2 expression

text: No

text: City of Hope National Medical Center

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11954:Sample 102

text: ArrayExpress

text: human

characteristic: common name

characteristic: description

text: adult acute lymphoblastic leukemia

characteristic: disease

text: Hispanic

characteristic: ethnic group

text: no fusions detected

text: Homo sapiens

text: Homo sapiens

text: blood

text: Other

text: Homo sapiens

text: male

text: Sample 102


E-MTAB-11954:Sample 103

text: No

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Yes

text: City of Hope National Medical Center

text: public

text: E-MTAB-11954:Sample 103

text: ArrayExpress

text: human

text: adult acute lymphoblastic leukemia

text: Hispanic

text: no fusions detected

characteristic: genotype

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

characteristic: organism part

text: Other

characteristic: ph like

text: Homo sapiens

text: female

characteristic: sex

text: Sample 103

characteristic: title


E-MTAB-11954:Sample 72

characteristic: Blast % by Flow cytometry

text: No

characteristic: CRLF2 expression

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Yes

characteristic: IGH rearranmgment by FISH

text: City of Hope National Medical Center

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11954:Sample 72

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: human

text: adult acute lymphoblastic leukemia

text: Hispanic

text: no fusions detected

text: Homo sapiens

text: Homo sapiens

text: blood

text: Other

text: Homo sapiens

text: female

text: Sample 72


E-MTAB-11954:Sample 5

text: Yes

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Yes

text: City of Hope National Medical Center

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11954:Sample 5

text: ArrayExpress

text: human

characteristic: common name

characteristic: description

text: adult acute lymphoblastic leukemia

characteristic: disease

text: Hispanic

characteristic: ethnic group

text: IGH-CRLF2 SSBP2-CHD1 (fusion with unknown significance)

text: Homo sapiens

text: Homo sapiens

text: blood

text: Ph-like

text: Homo sapiens

text: female

text: Sample 5


E-MTAB-11954:Sample 11

characteristic: Blast % by Flow cytometry

text: Yes

characteristic: CRLF2 expression

text: Yes

text: City of Hope National Medical Center

text: public

text: E-MTAB-11954:Sample 11

text: ArrayExpress

text: human

text: adult acute lymphoblastic leukemia

text: Hispanic

characteristic: genotype

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

characteristic: organism part

text: Ph-like

characteristic: ph like

text: Homo sapiens

text: female

characteristic: sex

text: Sample 11

characteristic: title


E-MTAB-11954:Sample 56

text: PB

text: No

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: No

characteristic: IGH rearranmgment by FISH

text: City of Hope National Medical Center

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11954:Sample 56

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: human

text: adult acute lymphoblastic leukemia

text: Hispanic

text: ETV6 -RUNX1

text: Homo sapiens

text: Homo sapiens

text: blood

text: Other

text: Homo sapiens

text: female

text: Sample 56


E-MTAB-11954:Sample 80

characteristic: Blast % by Flow cytometry

text: No

characteristic: CRLF2 expression

text: Yes

text: City of Hope National Medical Center

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11954:Sample 80

text: ArrayExpress

text: human

characteristic: common name

characteristic: description

text: adult acute lymphoblastic leukemia

characteristic: disease

text: Asian (Korean)

characteristic: ethnic group

text: no fusions detected

text: Homo sapiens

text: Homo sapiens

text: blood

text: Other

text: Homo sapiens

text: female

text: Sample 80


E-MTAB-11954:Sample 10

text: Yes

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Yes

text: City of Hope National Medical Center

text: public

text: E-MTAB-11954:Sample 10

text: ArrayExpress

text: human

text: adult acute lymphoblastic leukemia

text: Hispanic

characteristic: genotype

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

characteristic: organism part

text: Ph-like

characteristic: ph like

text: Homo sapiens

text: male

characteristic: sex

text: Sample 10

characteristic: title


E-MTAB-11954:Sample 78

characteristic: Blast % by Flow cytometry

text: No

characteristic: CRLF2 expression

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: No

characteristic: IGH rearranmgment by FISH

text: City of Hope National Medical Center

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11954:Sample 78

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: human

text: adult acute lymphoblastic leukemia

text: Hispanic

text: no fusions detected

text: Homo sapiens

text: Homo sapiens

text: blood

text: Other

text: Homo sapiens

text: male

text: Sample 78


E-MTAB-11954:Sample 63

text: No blast info

text: No

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: No

text: City of Hope National Medical Center

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11954:Sample 63

text: ArrayExpress

text: human

characteristic: common name

characteristic: description

text: adult acute lymphoblastic leukemia

characteristic: disease

text: Hispanic

characteristic: ethnic group

text: no fusions detected

text: Homo sapiens

text: Homo sapiens

text: blood

text: Other

text: Homo sapiens

text: female

text: Sample 63


E-MTAB-11954:Sample 99

text: No blast info

characteristic: Blast % by Flow cytometry

text: No

characteristic: CRLF2 expression

text: No

text: City of Hope National Medical Center

text: public

text: E-MTAB-11954:Sample 99

text: ArrayExpress

text: human

text: adult acute lymphoblastic leukemia

text: Hispanic

text: no fusions detected

characteristic: genotype

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

characteristic: organism part

text: Other

characteristic: ph like

text: Homo sapiens

text: female

characteristic: sex

text: Sample 99

characteristic: title


E-MTAB-11954:Sample 43

text: No blast info

text: No

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Yes

characteristic: IGH rearranmgment by FISH

text: City of Hope National Medical Center

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11954:Sample 43

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: human

text: adult acute lymphoblastic leukemia

text: White

text: EPOR-IGH

text: Homo sapiens

text: Homo sapiens

text: blood

text: Ph-like

text: Homo sapiens

text: female

text: Sample 43


E-MTAB-11954:Sample 57

text: No blast info

characteristic: Blast % by Flow cytometry

text: No

characteristic: CRLF2 expression

text: No

text: City of Hope National Medical Center

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11954:Sample 57

text: ArrayExpress

text: human

characteristic: common name

characteristic: description

text: adult acute lymphoblastic leukemia

characteristic: disease

text: Hispanic

characteristic: ethnic group

text: Homo sapiens

text: Homo sapiens

text: blood

text: Other

text: Homo sapiens

text: female

text: Sample 57


E-MTAB-11954:Sample 14

text: No blast info

text: Yes

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: No

text: City of Hope National Medical Center

text: public

text: E-MTAB-11954:Sample 14

text: ArrayExpress

text: human

text: adult acute lymphoblastic leukemia

text: Hispanic

text: no fusions detected

characteristic: genotype

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

characteristic: organism part

text: Other

characteristic: ph like

text: Homo sapiens

text: male

characteristic: sex

text: Sample 14

characteristic: title


E-MTAB-11954:Sample 36

text: No blast info

characteristic: Blast % by Flow cytometry

text: No

characteristic: CRLF2 expression

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: No

characteristic: IGH rearranmgment by FISH

text: City of Hope National Medical Center

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11954:Sample 36

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: human

text: adult acute lymphoblastic leukemia

text: Hispanic

text: EPOR-IGH

text: Homo sapiens

text: Homo sapiens

text: blood

text: Ph-like

text: Homo sapiens

text: female

text: Sample 36


E-MTAB-11954:Sample 44

text: No blast info

text: No

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: No

text: City of Hope National Medical Center

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11954:Sample 44

text: ArrayExpress

text: human

characteristic: common name

characteristic: description

text: adult acute lymphoblastic leukemia

characteristic: disease

text: Hispanic

characteristic: ethnic group

text: Homo sapiens

text: Homo sapiens

text: blood

text: Ph-like

text: Homo sapiens

text: male

text: Sample 44


E-MTAB-11954:Sample 59

text: left chest wall

characteristic: Blast % by Flow cytometry

text: No

characteristic: CRLF2 expression

text: No

text: City of Hope National Medical Center

text: public

text: E-MTAB-11954:Sample 59

text: ArrayExpress

text: human

text: adult acute lymphoblastic leukemia

text: White

characteristic: genotype

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

characteristic: organism part

text: Other

characteristic: ph like

text: Homo sapiens

text: male

characteristic: sex

text: Sample 59

characteristic: title


E-MTAB-11954:Sample 73

text: No blast info

text: No

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: City of Hope National Medical Center

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11954:Sample 73

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: human

text: adult acute lymphoblastic leukemia

text: Hispanic

text: no fusions detected

text: Homo sapiens

text: Homo sapiens

text: blood

text: Other

text: Homo sapiens

text: female

text: Sample 73


E-MTAB-11954:Sample 49

text: No blast info

characteristic: Blast % by Flow cytometry

text: No

text: No

characteristic: IGH rearranmgment by FISH

text: City of Hope National Medical Center

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11954:Sample 49

text: ArrayExpress

text: human

characteristic: common name

characteristic: description

text: adult acute lymphoblastic leukemia

characteristic: disease

text: White

characteristic: ethnic group

text: Homo sapiens

text: Homo sapiens

text: blood

text: Other

text: Homo sapiens

text: male

text: Sample 49


E-MTAB-11954:Sample 17

text: Tibial Lesion

text: Yes

characteristic: CRLF2 expression

characteristic: ENA-CHECKLIST

text: No

text: City of Hope National Medical Center

text: public

text: E-MTAB-11954:Sample 17

text: ArrayExpress

text: human

text: adult acute lymphoblastic leukemia

text: Hispanic

text: no fusions detected

characteristic: genotype

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

characteristic: organism part

text: Other

characteristic: ph like

text: Homo sapiens

text: female

characteristic: sex

text: Sample 17

characteristic: title


E-MTAB-11954:Sample 77

characteristic: Blast % by Flow cytometry

text: No

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Yes

characteristic: IGH rearranmgment by FISH

text: City of Hope National Medical Center

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11954:Sample 77

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: human

text: adult acute lymphoblastic leukemia

text: White

text: no fusions detected

text: Homo sapiens

text: Homo sapiens

text: blood

text: Other

text: Homo sapiens

text: male

text: Sample 77


E-MTAB-11954:Sample 45

text: No

characteristic: CRLF2 expression

characteristic: ENA-CHECKLIST

text: Yes

text: City of Hope National Medical Center

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11954:Sample 45

text: ArrayExpress

text: human

characteristic: common name

characteristic: description

text: adult acute lymphoblastic leukemia

characteristic: disease

text: Hispanic

characteristic: ethnic group

text: EPOR-INTERGENIC partner

text: Homo sapiens

text: Homo sapiens

text: blood

text: Other

text: Homo sapiens

text: female

text: Sample 45


E-MTAB-11954:Sample 100

text: No blast info

characteristic: Blast % by Flow cytometry

text: No

characteristic: ENA-FIRST-PUBLIC

text: No

text: City of Hope National Medical Center

text: public

text: E-MTAB-11954:Sample 100

text: ArrayExpress

text: human

text: adult acute lymphoblastic leukemia

text: Hispanic

text: no fusions detected

characteristic: genotype

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

characteristic: organism part

text: Other

characteristic: ph like

text: Homo sapiens

text: female

characteristic: sex

text: Sample 100

characteristic: title


E-MTAB-11954:Sample 61

text: No

characteristic: CRLF2 expression

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: No

characteristic: IGH rearranmgment by FISH

text: City of Hope National Medical Center

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11954:Sample 61

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: human

text: adult acute lymphoblastic leukemia

text: White

text: no fusions detected

text: Homo sapiens

text: Homo sapiens

text: blood

text: Other

text: Homo sapiens

text: male

text: Sample 61


E-MTAB-11954:Sample 40

characteristic: Blast % by Flow cytometry

text: No

characteristic: ENA-FIRST-PUBLIC

text: No

text: City of Hope National Medical Center

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11954:Sample 40

text: ArrayExpress

text: human

characteristic: common name

characteristic: description

text: adult acute lymphoblastic leukemia

characteristic: disease

text: White

characteristic: ethnic group

text: EPOR-IGH

text: Homo sapiens

text: Homo sapiens

text: blood

text: Ph-like

text: Homo sapiens

text: female

text: Sample 40


E-MTAB-11954:Sample 53

text: No

characteristic: CRLF2 expression

characteristic: ENA-CHECKLIST

text: No

text: City of Hope National Medical Center

text: public

text: E-MTAB-11954:Sample 53

text: ArrayExpress

text: human

text: adult acute lymphoblastic leukemia

text: White

characteristic: genotype

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

characteristic: organism part

text: Other

characteristic: ph like

text: Homo sapiens

text: female

characteristic: sex

text: Sample 53

characteristic: title


E-MTAB-11954:Sample 55

characteristic: Blast % by Flow cytometry

text: No

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: No

characteristic: IGH rearranmgment by FISH

text: City of Hope National Medical Center

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11954:Sample 55

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: human

text: adult acute lymphoblastic leukemia

text: White

text: Homo sapiens

text: Homo sapiens

text: blood

text: Other

text: Homo sapiens

text: female

text: Sample 55


E-MTAB-11954:Sample 48

text: No

characteristic: CRLF2 expression

characteristic: ENA-CHECKLIST

text: No

text: City of Hope National Medical Center

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11954:Sample 48

text: ArrayExpress

text: human

characteristic: common name

characteristic: description

text: adult acute lymphoblastic leukemia

characteristic: disease

text: Hispanic

characteristic: ethnic group

text: Homo sapiens

text: Homo sapiens

text: blood

text: Other

text: Homo sapiens

text: male

text: Sample 48


E-MTAB-11954:Sample 90

characteristic: Blast % by Flow cytometry

text: No

characteristic: ENA-FIRST-PUBLIC

text: No

text: City of Hope National Medical Center

text: public

text: E-MTAB-11954:Sample 90

text: ArrayExpress

text: human

text: adult acute lymphoblastic leukemia

text: White

text: no fusions detected

characteristic: genotype

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

characteristic: organism part

text: Other

characteristic: ph like

text: Homo sapiens

text: female

characteristic: sex

text: Sample 90

characteristic: title


E-MTAB-11954:Sample 18

text: No blast info

text: Yes

characteristic: CRLF2 expression

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: No

characteristic: IGH rearranmgment by FISH

text: City of Hope National Medical Center

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11954:Sample 18

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: human

text: adult acute lymphoblastic leukemia

text: Hispanic

text: no fusions detected, St Jude called Ph-like

text: Homo sapiens

text: Homo sapiens

text: blood

text: Ph-Like

text: Homo sapiens

text: male

text: Sample 18


E-MTAB-11954:Sample 50

characteristic: Blast % by Flow cytometry

text: No

characteristic: ENA-FIRST-PUBLIC

text: No

text: City of Hope National Medical Center

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11954:Sample 50

text: ArrayExpress

text: human

characteristic: common name

characteristic: description

text: adult acute lymphoblastic leukemia

characteristic: disease

text: White

characteristic: ethnic group

text: Homo sapiens

text: Homo sapiens

text: blood

text: Other

text: Homo sapiens

text: female

text: Sample 50


E-MTAB-11954:Sample 19

text: ? 81

text: Yes

characteristic: CRLF2 expression

characteristic: ENA-CHECKLIST

text: No

text: City of Hope National Medical Center

text: public

text: E-MTAB-11954:Sample 19

text: ArrayExpress

text: human

text: adult acute lymphoblastic leukemia

text: Hispanic

text: P2RY8-CRLF2 SSBP2-CHD1 (fusion with unknown significance)

characteristic: genotype

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

characteristic: organism part

text: Ph-like

characteristic: ph like

text: Homo sapiens

text: male

characteristic: sex

text: Sample 19

characteristic: title


E-MTAB-11954:Sample 96

characteristic: Blast % by Flow cytometry

text: No

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: No

characteristic: IGH rearranmgment by FISH

text: City of Hope National Medical Center

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11954:Sample 96

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: human

text: adult acute lymphoblastic leukemia

text: Hispanic

text: Homo sapiens

text: Homo sapiens

text: blood

text: Ph-like

text: Homo sapiens

text: female

text: Sample 96


E-MTAB-11954:Sample 34

text: No

characteristic: CRLF2 expression

characteristic: ENA-CHECKLIST

text: Yes

text: City of Hope National Medical Center

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11954:Sample 34

text: ArrayExpress

text: human

characteristic: common name

characteristic: description

text: adult acute lymphoblastic leukemia

characteristic: disease

text: White

characteristic: ethnic group

text: EPOR-IGH

text: Homo sapiens

text: Homo sapiens

text: blood

text: Ph-like

text: Homo sapiens

text: male

text: Sample 34


E-MTAB-11954:Sample 79

text: No blast info

characteristic: Blast % by Flow cytometry

text: No

characteristic: ENA-FIRST-PUBLIC

text: No

text: City of Hope National Medical Center

text: public

text: E-MTAB-11954:Sample 79

text: ArrayExpress

text: human

text: adult acute lymphoblastic leukemia

text: Hispanic

text: SSBP2-CHD1 (fusion with unknown significance)

characteristic: genotype

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

characteristic: organism part

text: Other

characteristic: ph like

text: Homo sapiens

text: male

characteristic: sex

text: Sample 79

characteristic: title


E-MTAB-11954:Sample 71

text: No

characteristic: CRLF2 expression

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: No

characteristic: IGH rearranmgment by FISH

text: City of Hope National Medical Center

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11954:Sample 71

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: human

text: adult acute lymphoblastic leukemia

text: White

text: no fusions detected

text: Homo sapiens

text: Homo sapiens

text: blood

text: Other

text: Homo sapiens

text: male

text: Sample 71


E-MTAB-11954:Sample 20

characteristic: Blast % by Flow cytometry

text: Yes

characteristic: ENA-FIRST-PUBLIC

text: No

text: City of Hope National Medical Center

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11954:Sample 20

text: ArrayExpress

text: human

characteristic: common name

characteristic: description

text: adult acute lymphoblastic leukemia

characteristic: disease

text: Hispanic

characteristic: ethnic group

text: Homo sapiens

text: Homo sapiens

text: blood

text: Ph-like

text: Homo sapiens

text: male

text: Sample 20


E-MTAB-11954:Sample 21

text: Yes

characteristic: CRLF2 expression

characteristic: ENA-CHECKLIST

text: No

text: City of Hope National Medical Center

text: public

text: E-MTAB-11954:Sample 21

text: ArrayExpress

text: human

text: adult acute lymphoblastic leukemia

text: Hispanic

characteristic: genotype

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

characteristic: organism part

text: Other

characteristic: ph like

text: Homo sapiens

text: male

characteristic: sex

text: Sample 21

characteristic: title


E-MTAB-11954:Sample 3

characteristic: Blast % by Flow cytometry

text: Yes

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: No

characteristic: IGH rearranmgment by FISH

text: City of Hope National Medical Center

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11954:Sample 3

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: human

text: adult acute lymphoblastic leukemia

text: Hispanic

text: no fusions detected

text: Homo sapiens

text: Homo sapiens

text: blood

text: Other

text: Homo sapiens

text: male

text: Sample 3