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characteristic: geographic location (region and locality)

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characteristic: geographic location (latitude)

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text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Wexford

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status

text: hCoV-19/Ireland/WX-NVRL-S22IRL00369800/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Wexford

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/WX-NVRL-S22IRL00370070/2022


characteristic: ENA-CHECKLIST

text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Wexford

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/WX-NVRL-S22IRL00361346/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: Scotland

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided


name: B11-A-19, Exome-seq of pre-treatment tumor tissue

text: public

tag: Namespace:Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Korea

text: human

characteristic: common name

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: B11-A-19, Exome-seq isolated from pre-treatment tumor tissue

characteristic: title


name: B11-A-21, Exome-seq of pre-treatment tumor tissue

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Korea

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: B11-A-21, Exome-seq isolated from pre-treatment tumor tissue


name: B11-A-21, Exome-seq of pheripheral blood

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: human

text: Homo sapiens

text: Homo sapiens

text: B11-A-21, Exome-seq isolated from pheripheral blood


name: B11-A-25, Exome-seq of pre-treatment tumor tissue

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: human

text: Homo sapiens

text: Homo sapiens

text: B11-A-25, Exome-seq isolated from pre-treatment tumor tissue


name: B11-A-25, Exome-seq of pheripheral blood

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: B11-A-25, Exome-seq isolated from pheripheral blood


name: B11-A-26, Exome-seq of pre-treatment tumor tissue

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: B11-A-26, Exome-seq isolated from pre-treatment tumor tissue


name: B11-A-26, Exome-seq of pheripheral blood

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: B11-A-26, Exome-seq isolated from pheripheral blood


name: B11-A-27, Exome-seq of pre-treatment tumor tissue

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: B11-A-27, Exome-seq isolated from pre-treatment tumor tissue


name: B11-A-27, Exome-seq of pheripheral blood

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: B11-A-27, Exome-seq isolated from pheripheral blood


name: B11-A-29, Exome-seq of pre-treatment tumor tissue

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: B11-A-29, Exome-seq isolated from pre-treatment tumor tissue


name: B11-A-29, Exome-seq of pheripheral blood

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: B11-A-29, Exome-seq isolated from pheripheral blood


name: B11-A-30, Exome-seq of pre-treatment tumor tissue

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: B11-A-30, Exome-seq isolated from pre-treatment tumor tissue


name: B11-A-30, Exome-seq of pheripheral blood

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: B11-A-30, Exome-seq isolated from pheripheral blood


text: West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

text: public

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Scotland

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: active surveillance in response to outbreak

characteristic: sample capture status

text: not provided

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Tree of Life Programme

text: Charlotte Wright

text: Wellcome Sanger Institute

text: African queen

characteristic: common name

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Scotland | Edinburgh | Charlotte Auerbach Road | University of Edinburgh | Ashworth Laboratories

text: Insectories at Stratford Butterfy Farm

characteristic: habitat

text: SIMON MARTIN

text: Edinburgh University

text: adult

characteristic: lifestage

text: Danaus chrysippus

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

characteristic: project name

text: Danaus chrysippus

text: MALE

characteristic: sex

text: NOT COLLECTED

text: N

characteristic: symbiont

characteristic: title

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Charlotte Wright

text: Wellcome Sanger Institute

characteristic: collecting institution

characteristic: collection date

text: African queen

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: Insectories at Stratford Butterfy Farm

text: SIMON MARTIN

text: Edinburgh University

text: adult

text: Danaus chrysippus

text: WHOLE ORGANISM

text: ToL

text: Danaus chrysippus

text: FEMALE

text: NOT COLLECTED

text: N


text: Sanger Institute

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Charlotte Wright

text: Wellcome Sanger Institute

text: African queen

characteristic: common name

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Insectories at Stratford Butterfy Farm

characteristic: habitat

text: SIMON MARTIN

text: Edinburgh University

text: adult

characteristic: lifestage

text: Danaus chrysippus

characteristic: organism

text: THORAX

characteristic: organism part

characteristic: sample derived from

text: Danaus chrysippus

text: MALE

text: NOT COLLECTED

text: N


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

characteristic: GAL

text: Tree of Life Programme

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Charlotte Wright

text: Wellcome Sanger Institute

text: African queen

text: United Kingdom

text: Insectories at Stratford Butterfy Farm

text: SIMON MARTIN

text: Edinburgh University

text: adult

text: Danaus chrysippus

text: SPERM SEMINAL FLUID

characteristic: project name

text: Danaus chrysippus

text: MALE

characteristic: sex

text: NOT COLLECTED

text: N

characteristic: symbiont

characteristic: title

characteristic: tolid


text: Sanger Institute

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Charlotte Wright

text: Wellcome Sanger Institute

characteristic: collecting institution

characteristic: collection date

text: African queen

characteristic: common name

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Insectories at Stratford Butterfy Farm

characteristic: habitat

text: SIMON MARTIN

text: Edinburgh University

text: adult

text: Danaus chrysippus

text: **OTHER REPRODUCTIVE ANIMAL TISSUE**

text: Danaus chrysippus

text: MALE

text: NOT COLLECTED

text: N


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

characteristic: GAL

text: Tree of Life Programme

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Charlotte Wright

text: Wellcome Sanger Institute

text: African queen

text: United Kingdom

text: Insectories at Stratford Butterfy Farm

text: SIMON MARTIN

text: Edinburgh University

text: adult

characteristic: lifestage

text: Danaus chrysippus

characteristic: organism

text: THORAX

characteristic: organism part

characteristic: project name

characteristic: sample derived from

text: Danaus chrysippus

text: FEMALE

text: NOT COLLECTED

text: N


text: jeong

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: human

characteristic: common name

text: Strand_seq of GM20509 early passage

characteristic: description

text: Homo sapiens

text: Homo sapiens

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: jeong

text: public

text: human

text: Strand_seq of GM20509 late passage

text: Homo sapiens

text: Homo sapiens


characteristic: External Id

text: jeong

text: public

characteristic: SRA accession

text: human

text: RNA sequencing of GM20509 in bulk

text: Homo sapiens

text: Homo sapiens


text: EMG

text: public

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Zebrafish digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR12456159 of study SRP277592.

text: Feces

characteristic: environmental medium

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Cetobacterium sp.

text: Gut microbiome samples from the control and antibiotic exposed zebrafish

text: uncultured Cetobacterium sp.

text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Cetobacterium;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12456159_bin.5_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Zebrafish digestive system

text: EBI-EMG

characteristic: common name

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR12456161 of study SRP277592.

characteristic: description

text: Feces

text: China

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

text: fish gut metagenome

text: uncultured Bosea sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Bosea sp.

text: HiSeq X Ten

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bosea;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR12456161_bin.5_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Zebrafish digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Leifsonia sp.

text: uncultured Leifsonia sp.

text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Leifsonia;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12456161_bin.8_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Zebrafish digestive system

text: EBI-EMG

characteristic: common name

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR12456162 of study SRP277592.

characteristic: description

text: Feces

text: China

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

text: fish gut metagenome

text: Enterobacter roggenkampii

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Enterobacter roggenkampii

text: HiSeq X Ten

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Enterobacter;s__Enterobacter roggenkampii

text: multi-marker approach

text: Metagenome-assembled genome: SRR12456162_bin.1_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Zebrafish digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Comamonadaceae bacterium

text: uncultured Comamonadaceae bacterium

text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12456162_bin.12_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Zebrafish digestive system

text: EBI-EMG

characteristic: common name

text: CheckM

characteristic: description

text: Feces

text: China

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

text: fish gut metagenome

text: Shewanella oneidensis

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Shewanella oneidensis

text: HiSeq X Ten

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Shewanellaceae;g__Shewanella;s__Shewanella oneidensis

text: multi-marker approach

text: Metagenome-assembled genome: SRR12456162_bin.15_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes v3.15.3

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

text: metaWRAP v1.3

text: Zebrafish digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

characteristic: metagenomic source

text: Aeromonas hydrophila

text: Aeromonas hydrophila

text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Aeromonadales;f__Aeromonadaceae;g__Aeromonas;s__Aeromonas hydrophila

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12456162_bin.2_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Zebrafish digestive system

text: EBI-EMG

characteristic: common name

text: CheckM

characteristic: description

text: Feces

text: China

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

text: fish gut metagenome

text: uncultured Aeromonadaceae bacterium

characteristic: organism

text: Gut microbiome samples from the control and antibiotic exposed zebrafish

characteristic: project name

characteristic: sample derived from

text: uncultured Aeromonadaceae bacterium

text: HiSeq X Ten

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Aeromonadales;f__Aeromonadaceae;g__;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR12456162_bin.3_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Zebrafish digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Uliginosibacterium sp.

text: uncultured Uliginosibacterium sp.

text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Zoogloeaceae;g__Uliginosibacterium;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12456162_bin.5_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Zebrafish digestive system

text: EBI-EMG

characteristic: common name

text: CheckM

characteristic: description

text: Feces

text: China

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

text: fish gut metagenome

text: uncultured Aquitalea sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Aquitalea sp.

text: HiSeq X Ten

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Aquitalea;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR12456162_bin.8_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Zebrafish digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR12456163 of study SRP277592.

text: Feces

characteristic: environmental medium

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Microbacterium sp.

text: uncultured Microbacterium sp.

text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12456163_bin.6_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Zebrafish digestive system

text: EBI-EMG

characteristic: common name

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR12456164 of study SRP277592.

characteristic: description

text: Feces

text: China

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

text: fish gut metagenome

text: uncultured Flavobacterium sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Flavobacterium sp.

text: HiSeq X Ten

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR12456164_bin.1_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Zebrafish digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

characteristic: metagenomic source

text: Pedobacter soli

text: Pedobacter soli

text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Sphingobacteriia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pedobacter;s__Pedobacter soli

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12456164_bin.10_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Zebrafish digestive system

text: EBI-EMG

characteristic: common name

text: CheckM

characteristic: description

text: Feces

text: China

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

text: fish gut metagenome

text: uncultured Rhizobium sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Rhizobium sp.

text: HiSeq X Ten

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR12456164_bin.12_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Zebrafish digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Dechloromonas sp.

text: Gut microbiome samples from the control and antibiotic exposed zebrafish

text: uncultured Dechloromonas sp.

text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Azonexaceae;g__Dechloromonas;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12456164_bin.2_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Zebrafish digestive system

text: EBI-EMG

characteristic: common name

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR12456166 of study SRP277592.

characteristic: description

text: Feces

text: China

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

text: fish gut metagenome

text: uncultured Chlamydiae bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Chlamydiae bacterium

text: HiSeq X Ten

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Chlamydiae;c__Chlamydiia;o__Parachlamydiales;f__Waddliaceae;g__;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR12456166_bin.10_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Zebrafish digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Legionellales bacterium

text: uncultured Legionellales bacterium

text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12456166_bin.12_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Zebrafish digestive system

text: EBI-EMG

characteristic: common name

text: CheckM

characteristic: description

text: Feces

text: China

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

text: fish gut metagenome

text: uncultured Pseudorhodobacter sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Pseudorhodobacter sp.

text: HiSeq X Ten

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudorhodobacter;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR12456166_bin.14_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Zebrafish digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Flavobacterium sp.

text: uncultured Flavobacterium sp.

text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12456166_bin.2_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Zebrafish digestive system

text: EBI-EMG

characteristic: common name

text: CheckM

characteristic: description

text: Feces

text: China

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

text: fish gut metagenome

text: uncultured Alphaproteobacteria bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: HiSeq X Ten

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__;g__;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR12456166_bin.4_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

text: metaWRAP v1.3

text: Zebrafish digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Reyranella sp.

text: uncultured Reyranella sp.

text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__;g__Reyranella;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12456166_bin.8_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Zebrafish digestive system

text: EBI-EMG

characteristic: common name

text: CheckM

characteristic: description

text: Feces

text: China

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

text: fish gut metagenome

text: uncultured Paucibacter sp.

characteristic: organism

text: Gut microbiome samples from the control and antibiotic exposed zebrafish

characteristic: project name

characteristic: sample derived from

text: uncultured Paucibacter sp.

text: HiSeq X Ten

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Paucibacter;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR12456166_bin.9_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Zebrafish digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR12456167 of study SRP277592.

text: Feces

characteristic: environmental medium

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Francisellaceae bacterium

text: uncultured Francisellaceae bacterium

text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Francisellaceae;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12456167_bin.1_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Zebrafish digestive system

text: EBI-EMG

characteristic: common name

text: CheckM

characteristic: description

text: Feces

text: China

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

text: fish gut metagenome

text: uncultured Opitutae bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Opitutae bacterium

text: HiSeq X Ten

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Verrucomicrobia;c__Opitutae;o__;f__;g__;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR12456167_bin.5_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Zebrafish digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Firmicutes bacterium

text: uncultured Firmicutes bacterium

text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__;o__;f__;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12456167_bin.9_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Zebrafish digestive system

text: EBI-EMG

characteristic: common name

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR12456168 of study SRP277592.

characteristic: description

text: Feces

text: China

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

text: fish gut metagenome

text: uncultured Rhodospirillales bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Rhodospirillales bacterium

text: HiSeq X Ten

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__;g__;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR12456168_bin.10_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

text: metaWRAP v1.3

text: Zebrafish digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

characteristic: metagenomic source

text: Cetobacterium somerae

text: Cetobacterium somerae

text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Cetobacterium;s__Cetobacterium somerae

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12456168_bin.11_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Zebrafish digestive system

text: EBI-EMG

characteristic: common name

text: CheckM

characteristic: description

text: Feces

text: China

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

text: fish gut metagenome

text: Plesiomonas shigelloides

characteristic: organism

text: Gut microbiome samples from the control and antibiotic exposed zebrafish

characteristic: project name

characteristic: sample derived from

text: Plesiomonas shigelloides

text: HiSeq X Ten

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__;g__Plesiomonas;s__Plesiomonas shigelloides

text: multi-marker approach

text: Metagenome-assembled genome: SRR12456168_bin.14_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Zebrafish digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Microbacterium sp.

text: uncultured Microbacterium sp.

text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12456168_bin.4_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Zebrafish digestive system

text: EBI-EMG

characteristic: common name

text: CheckM

characteristic: description

text: Feces

text: China

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

text: fish gut metagenome

text: uncultured Firmicutes bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Firmicutes bacterium

text: HiSeq X Ten

text: multi-marker approach

text: Metagenome-assembled genome: SRR12456168_bin.9_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Zebrafish digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR12456169 of study SRP277592.

text: Feces

characteristic: environmental medium

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured actinobacterium

text: uncultured actinobacterium

text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Actinobacteria;c__Actinobacteria;o__;f__;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12456169_bin.11_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Zebrafish digestive system

text: EBI-EMG

characteristic: common name

text: CheckM

characteristic: description

text: Feces

text: China

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

text: fish gut metagenome

text: uncultured Alsobacter sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Alsobacter sp.

text: HiSeq X Ten

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__;g__Alsobacter;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR12456169_bin.13_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Zebrafish digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Mycolicibacterium sp.

text: uncultured Mycolicibacterium sp.

text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycolicibacterium;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12456169_bin.16_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Zebrafish digestive system

text: EBI-EMG

characteristic: common name

text: CheckM

characteristic: description

text: Feces

text: China

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

text: fish gut metagenome

text: uncultured Hyphomicrobium sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Hyphomicrobium sp.

text: HiSeq X Ten

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Hyphomicrobium;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR12456169_bin.17_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Zebrafish digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Microbacterium sp.

text: Gut microbiome samples from the control and antibiotic exposed zebrafish

text: uncultured Microbacterium sp.

text: HiSeq X Ten

characteristic: sequencing method

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12456169_bin.2_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Zebrafish digestive system

text: EBI-EMG

characteristic: common name

text: CheckM

characteristic: description

text: Feces

text: China

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

text: fish gut metagenome

text: uncultured Chitinibacter sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Chitinibacter sp.

text: HiSeq X Ten

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Chitinibacter;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR12456169_bin.21_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Zebrafish digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Feces

characteristic: environmental medium

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Rhodospirillales bacterium

text: uncultured Rhodospirillales bacterium

text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12456169_bin.25_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Zebrafish digestive system

text: EBI-EMG

characteristic: common name

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR12456170 of study SRP277592.

characteristic: description

text: Feces

text: China

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

text: fish gut metagenome

text: uncultured Uliginosibacterium sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Uliginosibacterium sp.

text: HiSeq X Ten

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Zoogloeaceae;g__Uliginosibacterium;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR12456170_bin.11_metaWRAP_v1.3_MAG

characteristic: title