characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

characteristic: INSDC center name

text: public

text: qiita_sid_13414:13414.20201103.SjapGill.R4.top.3

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

characteristic: common name

text: not applicable

text: not applicable

characteristic: control

text: not applicable

characteristic: control type

text: not applicable

text: not applicable

characteristic: depth m

text: not applicable

text: not applicable

characteristic: description

text: not applicable

characteristic: diet

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: TRUE

text: h

text: Host-associated

text: Animal

text: Animal corpus

text: marine biome

text: animal-associated habitat

text: host-associated

text: gill

text: organic material

text: not applicable

text: not applicable

text: clearmag beads KF

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: USA:CA:San Diego

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not collected

text: UBERON:respiratory system

text: not collected

text: UBERON:mucus

text: UBERON:gill

text: chub mackerel

text: not collected

text: not collected

text: Scomber japonicus

text: not collected

text: not collected

text: Pacific chub mackerel

text: cm

text: not applicable

text: grams

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: fish metagenome

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: fish gill

text: g

text: gill tissue

text: not applicable

text: fish metagenome

text: not applicable

text: fall

text: not collected

text: posterior

text: dorsal

text: whole tissue

text: filament

text: filament whole

text: sink

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: mackerel_gill bio geo

text: not applicable

text: not applicable

text: not applicable

text: not applicable


status: PUBLIC

tag: attribute

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: TRUE

text: subtropical

characteristic: climate

text: soft bottom

text: plainfin midshipman

text: LC

text: not applicable

text: not applicable

text: crustaceans, fish

text: fishbase.org

text: TRUE

text: h

characteristic: elevation

text: Host-associated

text: Animal

text: Animal distal gut

characteristic: env

text: marine biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: hindgut

text: intestine environment

text: Porichthys notatus

characteristic: extraction date

text: clearmag beads KF

text: not applicable

text: not applicable

text: otter trawl

text: USA:CA:San Diego

characteristic: geo loc name

text: not applicable

text: OS

text: mid

text: mesopelagic

text: The ecology of marine fishes of california and adjacent waters 2006

text: not collected

text: UBERON:gastrointestinal system

text: UBERON:feces

text: UBERON:digestive tract

text: plainfin midshipman

text: not collected

text: Porichthys notatus

text: not collected

text: plainfin midshipmen

text: cm

text: grams

text: not applicable

text: not applicable

text: benthic trawl

text: not applicable

text: not applicable

text: Eastern Pacific

text: fish metagenome

text: Actinopterygii

text: toadfishes

text: Batrachoididae

text: Porichthys

text: Porichthys notatus

text: Porichthys notatus

text: Batrachoidiformes

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: oviparous

text: marine

text: marine

text: fish hindgut digesta

text: hg

text: hindgut digesta

text: gill, fin, skin, MG, HG

text: fish metagenome

text: winter

text: Unknown

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: sandy bottom

text: soft bottom

text: Labriform

text: generalist

text: TRUE

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

characteristic: INSDC center name

text: public

text: FALSE

text: deep water

text: soft bottom

text: black eelpout

characteristic: common name

text: NE

characteristic: control

text: not applicable

characteristic: control type

text: not applicable

characteristic: depth m

characteristic: description

text: euphausiids, shrimp

characteristic: diet

text: MS Love. Everything you wanted to know about the fishes of the west coast. 2011

text: TRUE

text: b

text: Host-associated

text: Animal

text: Animal surface

text: marine biome

text: animal-associated habitat

text: host-associated

text: skin

text: mucus

text: Lycodes diapterus

text: clearmag beads KF

text: low

text: not applicable

text: otter trawl

text: trawl

text: USA:CA:San Diego

text: muddy bottoms

text: SSLP

text: mid

text: mesopelagic and benthopelagic

text: not collected

text: UBERON:skin

text: UBERON:mucus

text: UBERON:skin of body

text: black eelpout

text: not collected

text: Lycodes diapterus

text: not collected

text: black eelpout

text: cm

text: grams

text: not applicable

text: not applicable

text: benthic trawl

text: not applicable

text: not applicable

text: Eastern Pacific

text: fish metagenome

text: Actinopterygii

text: eelpouts

text: Zoarcidae

text: Lycodes

text: Lycodes diapterus

text: Lycodes diapterus

text: Perciformes

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: oviparous

text: marine

text: marine

text: fish skin

text: s

text: skin swab

text: gill, fin, skin, MG, HG

text: fish metagenome

text: winter

text: Unknown

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: sandy bottom

text: soft bottom

text: Labriform

text: generalist

text: TRUE

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: FALSE

text: deep water

characteristic: climate

text: deep water benthic

text: highlight hatchetfish

text: LC

text: not applicable

text: not applicable

text: ostracods, , copepods, euphausiids, amphipods, decapods

text: fishbase.org

text: TRUE

text: a

text: Host-associated

text: Animal

text: Animal corpus

text: marine biome

text: animal-associated habitat

text: host-associated

text: gill

text: organic material

text: Sternoptyx sp. ASIZP 0911478

text: clearmag beads KF

text: all tissue used

text: not applicable

text: Isaacs Kidd Midwater Trawl

text: USA:CA:San Diego

text: not collected

text: deep sea

text: DSLP

text: deep

text: bathypelagic

text: not collected

text: UBERON:respiratory system

text: UBERON:mucus

text: UBERON:gill

text: Highlight hatchetfish

text: not collected

text: Sternoptyx pseudobscura

text: not collected

text: Highlight hatchetfish

text: cm

text: grams

text: not applicable

text: not applicable

text: midwater trawl

text: not applicable

text: not applicable

text: not applicable

text: Eastern Pacific

text: fish metagenome

text: Actinopterygii

text: marine hatchetfishes

text: Sternoptychidae

text: Sternoptyx

text: Sternoptyx pseudobscura

text: Sternoptyx pseudobscura

text: Stomiatiformes

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: oviparous

text: marine

text: marine

text: fish gill

text: g

text: gill tissue

text: gill, fin, skin, MG, HG

text: fish metagenome

text: winter

text: Unknown

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: sandy bottom

text: deep water benthic

text: Carangiform

text: crusier sprinter

text: TRUE

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: FALSE

text: subtropical

text: pelagic

text: dolphinfish

text: LC

text: not applicable

text: not applicable

text: fish, squid, zooplankton, crustacean

text: fishbase.org

text: TRUE

text: a

characteristic: elevation

text: Host-associated

text: Animal

text: Animal proximal gut

characteristic: env

text: marine biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: midgut

text: intestine environment

text: not applicable

text: Coryphaena hippurus

characteristic: extraction date

text: clearmag beads KF

text: not applicable

text: not applicable

text: hook and line

text: not applicable

text: USA:CA:San Diego

characteristic: geo loc name

text: not applicable

text: P

text: shallow

text: neritic

text: not collected

text: UBERON:gastrointestinal system

text: UBERON:feces

text: UBERON:digestive tract

text: dolphinfish

text: not collected

text: Coryphaena hippurus

text: not collected

text: Dolphinfish

text: cm

text: grams

text: not applicable

text: not applicable

text: rod and reel

text: not applicable

text: not applicable

text: Eastern Pacific

text: fish metagenome

text: Actinopterygii

text: dolphinfishes

text: Coryphaenidae

text: Coryphaena

text: Coryphaena hippurus

text: Coryphaena hippurus

text: Carangiformes

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: oviparous

text: marine

text: oceanodromous

text: fish midgut digesta

text: mg

text: midgut digesta

text: gill, fin, skin, MG, HG

text: fish metagenome

text: summer

text: Unknown

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: pelagic

text: pelagic

text: Carangiform

text: crusier sprinter

text: not applicable

text: TRUE

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: FALSE

text: temperate

text: soft bottom

text: summer flounder

characteristic: common name

text: LC

characteristic: control

text: not applicable

characteristic: control type

text: not applicable

characteristic: depth m

characteristic: description

text: fish, shrimp

characteristic: diet

text: TRUE

text: a

text: Host-associated

text: Animal

text: Animal corpus

text: marine biome

text: animal-associated habitat

text: host-associated

text: gill

text: organic material

text: Paralichthys dentatus

text: columns

text: not applicable

text: not applicable

text: ATLgDNA

text: hook and line

text: 10 mi SE Fire Island inlet

text: USA:NY:Long Island

text: bays, sandy substrate, eelgrass

text: IS

text: shallow

text: neritic

text: not collected

text: UBERON:respiratory system

text: UBERON:mucus

text: UBERON:gill

text: summer flounder

text: not collected

text: Paralichthys dentatus

text: not collected

text: summer flounder

text: cm

text: grams

text: rod and reel

text: whole gill immediately removed, placed on ice, frozen at 9pm

text: Western Atlantic

text: fish metagenome

text: Actinopterygii

text: large tooth flounders

text: Paralichthyidae

text: Paralichthys

text: Paralichthys dentatus

text: Paralichthys dentatus

text: Pleuronectiformes

text: not applicable

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: oviparous

text: brackish

text: brackish

text: fish gill

text: g

text: gill tissue

text: gill

text: fish metagenome

text: summer

text: F

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: sandy bottom

text: soft bottom

text: Pleuronectiform

text: flow refuging

text: FALSE

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: FALSE

text: subtropical

characteristic: climate

text: pelagic

text: atlantic needlefish

text: not collected

text: LC

text: not applicable

text: not applicable

text: small fishes

text: fishbase.org

text: not collected

text: TRUE

text: h

text: Host-associated

text: Animal

text: Animal corpus

text: marine biome

text: animal-associated habitat

text: host-associated

text: gill

text: organic material

text: Strongylura

text: columns

text: not applicable

text: not applicable

text: ATLgDNA

text: hook and line

text: not collected

text: not applicable

text: Great Neck Creek

text: USA:NY:Long Island

text: not applicable

text: coastal areas, mangrove lagoons, reef

text: BE

text: shallow

text: intertidal

text: not collected

text: UBERON:respiratory system

text: UBERON:mucus

text: UBERON:gill

text: Atlantic needlefish

text: not collected

text: not collected

text: Strongylura marina

text: not applicable

text: not collected

text: atlantic needlefish

text: cm

text: not collected

text: grams

text: not applicable

text: not applicable

text: not applicable

text: rod and reel

text: not applicable

text: not applicable

text: Western Atlantic

text: fish metagenome

text: Actinopterygii

text: needlefishes

text: Belonidae

text: Strongylura

text: Strongylura marina

text: Strongylura marina

text: Beloniformes

text: not applicable

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: oviparous

text: brackish

text: brackish

text: fish gill

text: g

text: gill tissue

text: not applicable

text: fish metagenome

text: not applicable

text: summer

text: Unknown

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: surface

text: rock associated

text: Esociform

text: accelerator

text: not collected

text: FALSE

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: FALSE

text: subtropical

text: soft bottom

text: oyster toadfish

text: LC

text: not applicable

text: not applicable

text: crustaceans, mollusks

text: TRUE

text: a

characteristic: elevation

text: Host-associated

text: Animal

text: Animal corpus

characteristic: env

text: marine biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: gill

text: organic material

text: Opsanus tau

characteristic: extraction date

text: columns

text: not applicable

text: not applicable

text: ATLgDNA

text: fish trap

text: Great Neck Creek

text: USA:NY:Long Island

characteristic: geo loc name

text: reefs, rocky bottom,s jetties, wrecks

text: BE

text: shallow

text: intertidal

text: not collected

text: UBERON:respiratory system

text: UBERON:mucus

text: UBERON:gill

text: oyster toadfish

text: not collected

text: Opsanus tau

text: not collected

text: oyster toadfish

text: cm

text: grams

text: not applicable

text: net

text: 3 gill arches present

text: 3 gill arches present

text: Western Atlantic

text: fish metagenome

text: Actinopterygii

text: toadfishes

text: Batrachoididae

text: Opsanus

text: Opsanus tau

text: Opsanus tau

text: Batrachoidiformes

text: not applicable

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: oviparous

text: brackish

text: brackish

text: fish gill

text: g

text: gill tissue

text: gill, fin

text: fish metagenome

text: summer

text: F

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: muddy bottom

text: rock associated

text: Cottiform

text: accelerator

text: TRUE

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

characteristic: INSDC center name

text: public

text: FALSE

text: subtropical

text: soft bottom

text: american eel

characteristic: common name

text: EN

characteristic: control

text: not applicable

characteristic: control type

text: not applicable

characteristic: depth m

characteristic: description

text: Ephemeroptera, Odonata, Plecoptera, Coleoptera, Trichoptera, and Lepidoptera, as well as gastropods, oligochaetes, amphipods, isopods, mysids, and fish from the families Percidae, Cyprinidae, Ictaluridae, Catostomidae and Anguillidae

characteristic: diet

text: fishbase.org

text: TRUE

text: b

text: Host-associated

text: Animal

text: Animal corpus

text: marine biome

text: animal-associated habitat

text: host-associated

text: gill

text: organic material

text: Anguilla rostrata

text: columns

text: not applicable

text: not applicable

text: ATLgDNA

text: fish trap

text: Great Neck Creek

text: USA:NY:Long Island

text: boulders and logs, streams, river, muddy silt lakes

text: BE

text: mid

text: mesopelagic

text: not collected

text: UBERON:respiratory system

text: UBERON:mucus

text: UBERON:gill

text: American eel

text: not collected

text: Anguilla rostrata

text: not collected

text: american eel

text: cm

text: grams

text: net

text: not applicable

text: not applicable

text: Western Atlantic

text: fish metagenome

text: Actinopterygii

text: freshwater eels

text: Anguillidae

text: Anguilla

text: Anguilla rostrata

text: Anguilla rostrata

text: Anguilliformes

text: not applicable

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: oviparous

text: brackish

text: catadromous

text: fish gill

text: g

text: gill tissue

text: gill, fin

text: fish metagenome

text: summer

text: M

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: muddy bottom

text: soft bottom

text: Anguilliform

text: burrowing

text: TRUE

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: FALSE

text: subtropical

characteristic: climate

text: pelagic

text: blue runner

text: LC

text: not applicable

text: not applicable

text: adult eat: fish, shrimp, inverts

text: fishbase.org

text: TRUE

text: c

text: Host-associated

text: Animal

text: Animal corpus

text: marine biome

text: animal-associated habitat

text: host-associated

text: gill

text: organic material

text: Caranx crysos

text: columns

text: not applicable

text: not applicable

text: ATLgDNA

text: hook and line

text: NOAA weather buoy 44025

text: USA:NY:Long Island

text: juveniles; floating kelp

text: CP

text: shallow

text: neritic

text: not collected

text: UBERON:respiratory system

text: UBERON:mucus

text: UBERON:gill

text: Blue runner

text: not collected

text: Caranx crysos

text: not collected

text: blue runner

text: cm

text: grams

text: rod and reel

text: frozen at 7:30

text: frozen at 7:30

text: Western Atlantic

text: fish metagenome

text: Actinopterygii

text: jacks and pompanos

text: Carangidae

text: Caranx

text: Caranx crysos

text: Caranx crysos

text: Carangiformes

text: not applicable

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: oviparous

text: brackish

text: brackish

text: fish gill

text: g

text: gill tissue

text: gill, fin

text: fish metagenome

text: summer

text: Unknown

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: surface

text: pelagic

text: Carangiform

text: crusier sprinter

text: TRUE

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: FALSE

text: subtropical

text: pelagic

text: dolphinfish

text: LC

text: not applicable

text: not applicable

text: fish, zooplankton, crustacean, squid

text: fishbase.org

text: TRUE

text: d

characteristic: elevation

text: Host-associated

text: Animal

text: Animal corpus

characteristic: env

text: marine biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: gill

text: organic material

text: Coryphaena hippurus

characteristic: extraction date

text: columns

text: not applicable

text: not applicable

text: ATLgDNA

text: hook and line

text: WHOI research buoy

text: USA:NY:Long Island

characteristic: geo loc name

text: pelagic surface

text: P

text: shallow

text: neritic

text: not collected

text: UBERON:respiratory system

text: UBERON:mucus

text: UBERON:gill

text: dolphinfish

text: not collected

text: Coryphaena hippurus

text: not collected

text: dolphinfish

text: cm

text: grams

text: rod and reel

text: whole left gill removed/iced at 4pm, frozen at 7:30

text: Western Atlantic

text: fish metagenome

text: Actinopterygii

text: dolphinfishes

text: Coryphaenidae

text: Coryphaena

text: Coryphaena hippurus

text: Coryphaena hippurus

text: Carangiformes

text: not applicable

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: oviparous

text: brackish

text: brackish

text: fish gill

text: g

text: gill tissue

text: gill,fin

text: fish metagenome

text: summer

text: F

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: surface

text: pelagic

text: Thunniform

text: crusier sprinter

text: TRUE

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: FALSE

text: subtropical

text: soft bottom

text: rainwater killifish

characteristic: common name

text: not collected

text: LC

characteristic: control

text: not applicable

characteristic: control type

text: not applicable

characteristic: depth m

characteristic: description

text: larval crustaceans cyclopoid and harpacticoid copepods, mosquito larvae, worms, mollusks

characteristic: diet

text: fishbase.org

text: not collected

text: TRUE

text: e

text: Host-associated

text: Animal

text: Animal corpus

text: marine biome

text: animal-associated habitat

text: host-associated

text: gill

text: organic material

text: Lucania

text: columns

text: not applicable

text: not applicable

text: ATLgDNA

text: fish trap

text: not collected

text: not applicable

text: Great Neck Creek

text: USA:NY:Long Island

text: not applicable

text: vegetatd quiet water

text: BE

text: shallow

text: intertidal

text: not collected

text: UBERON:respiratory system

text: UBERON:mucus

text: UBERON:gill

text: rainwater killifish

text: not collected

text: not collected

text: Lucania parva

text: not applicable

text: not collected

text: rainwater killifish

text: cm

text: not collected

text: grams

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: net

text: not applicable

text: not applicable

text: Western Atlantic

text: fish metagenome

text: Actinopterygii

text: topminnows and killisfishes

text: Fundulidae

text: Lucania

text: Lucania parva

text: Lucania parva

text: Cyprinodontiformes

text: not applicable

text: not applicable

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: oviparous

text: brackish

text: brackish

text: fish gill

text: g

text: gill tissue

text: not applicable

text: fish metagenome

text: not applicable

text: summer

text: Unknown

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: muddy bottom

text: soft bottom

text: Esociform

text: accelerator

text: not collected

text: TRUE

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: FALSE

text: temperate

characteristic: climate

text: soft bottom

text: northern searobin

text: LC

text: not applicable

text: not applicable

text: shrimp, crabs, crustacean, squid bivalves, small fish

text: fishbase.org

text: TRUE

text: b

text: Host-associated

text: Animal

text: Animal corpus

text: marine biome

text: animal-associated habitat

text: host-associated

text: gill

text: organic material

text: Prionotus carolinus

text: columns

text: not applicable

text: not applicable

text: ATLgDNA

text: hook and line

text: 10 mi SE Fire Island inlet

text: USA:NY:Long Island

text: sandy bottom

text: IS

text: shallow

text: neritic

text: not collected

text: UBERON:respiratory system

text: UBERON:mucus

text: UBERON:gill

text: northern searobin

text: not collected

text: Prionotus carolinus

text: not collected

text: northern searobin

text: cm

text: grams

text: not applicable

text: not applicable

text: rod and reel

text: frozen at 9pm

text: frozen at 9pm

text: Western Atlantic

text: fish metagenome

text: Actinopterygii

text: Searobins

text: Triglidae

text: Prionotus

text: Prionotus carolinus

text: Prionotus carolinus

text: Perciformes

text: not applicable

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: oviparous

text: brackish

text: brackish

text: fish gill

text: g

text: gill tissue

text: gill, fin

text: fish metagenome

text: summer

text: F

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: sandy bottom

text: soft bottom

text: Cottiform

text: accelerator

text: TRUE

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: FALSE

text: temperate

text: rock associated

text: little skate

text: NT

text: not applicable

text: not applicable

text: bottom dwelling organisms: crab, shrimp, polychaetes, mollusks, squid, bony fish

text: fishbase.org

text: TRUE

text: f

characteristic: elevation

text: Host-associated

text: Animal

text: Animal corpus

characteristic: env

text: marine biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: gill

text: organic material

text: Amblyraja radiata

characteristic: extraction date

text: columns

text: not applicable

text: not applicable

text: ATLgDNA

text: hook and line

text: USS San Diego wreck

text: USA:NY:Long Island

characteristic: geo loc name

text: sandy or gravel bottoms

text: MDRF

text: shallow

text: neritic

text: not collected

text: UBERON:respiratory system

text: UBERON:mucus

text: UBERON:gill

text: little little skate

text: not collected

text: Leucoraja erinacea

text: not collected

text: little skate

text: cm

text: grams

text: not applicable

text: rod and reel

text: possible contamination, 5 gill arches

text: possible contamination, 5 gill arches

text: Western Atlantic

text: fish metagenome

text: Chondrichthyes

text: skates

text: Rajidae

text: Leucoraja

text: Leucoraja erinacea

text: Leucoraja erinacea

text: Rajiformes

text: not applicable

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: oviparous

text: marine

text: oceanodromous

text: fish gill

text: g

text: gill tissue

text: gill, fin

text: fish metagenome

text: summer

text: F

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: shipwreck

text: rock associated

text: Rajiform

text: flow refuging

text: TRUE

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

characteristic: INSDC center name

text: public

text: FALSE

text: tropical

text: rock associated

text: yellowfin tuna

characteristic: common name

text: NT

characteristic: control

text: not applicable

characteristic: control type

text: not applicable

characteristic: depth m

characteristic: description

text: fish, squid, crustraceans

characteristic: diet

text: fishbase.org

text: TRUE

text: g

text: Host-associated

text: Animal

text: Animal corpus

text: marine biome

text: animal-associated habitat

text: host-associated

text: gill

text: organic material

text: Thunnus albacares

text: columns

text: not applicable

text: not applicable

text: ATLgDNA

text: green stick

text: east wall Hudson Canyon

text: USA:NY:Long Island

text: not applicable

text: P

text: shallow

text: neritic

text: not collected

text: UBERON:respiratory system

text: UBERON:mucus

text: UBERON:gill

text: yellowfin tuna

text: not collected

text: Thunnus albacares

text: not collected

text: yellowfin tuna

text: cm

text: grams

text: net

text: not applicable

text: not applicable

text: Western Atlantic

text: fish metagenome

text: Actinopterygii

text: mackerals, tunas, bonitos

text: Scombridae

text: Thunnus

text: Thunnus albacares

text: Thunnus albacares

text: Scombriformes

text: not applicable

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: oviparous

text: marine

text: oceanodromous

text: fish gill

text: g

text: gill tissue

text: gill, fin, MG, HG, skin, blood

text: fish metagenome

text: fall

text: Unknown

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: rocky shelf

text: pelagic

text: Thunniform

text: crusier sprinter

text: TRUE

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: FALSE

text: subtropical

characteristic: climate

text: rock associated

text: bluefish

text: VU

text: not applicable

text: not applicable

text: fish, crustaceans, squid

text: fishbase.org

text: TRUE

text: h

text: Host-associated

text: Animal

text: Animal corpus

text: marine biome

text: animal-associated habitat

text: host-associated

text: gill

text: organic material

text: Pomatomus saltatrix

text: columns

text: not applicable

text: not applicable

text: ATLgDNA

text: hook and line

text: Great South Bay

text: USA:NY:Long Island

text: rocky beaches, estuaries, shallow cosatl water

text: BE

text: shallow

text: neritic

text: not collected

text: UBERON:respiratory system

text: UBERON:mucus

text: UBERON:gill

text: bluefish (juvenile)

text: not collected

text: Pomatomus saltatrix

text: not collected

text: bluefish (adult)

text: cm

text: grams

text: not applicable

text: rod and reel

text: not applicable

text: not applicable

text: Western Atlantic

text: fish metagenome

text: Actinopterygii

text: bluefishes

text: Pomatomidae

text: Pomatomus

text: Pomatomus saltatrix

text: Pomatomus saltatrix

text: Scombriformes

text: not applicable

text: not applicable

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: oviparous

text: brackish

text: brackish

text: fish gill

text: g

text: gill tissue

text: gill, fin

text: fish metagenome

text: fall

text: M

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: rocky bottom

text: rock associated

text: Carangiform

text: crusier sprinter

text: FALSE

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: FALSE

text: temperate

text: soft bottom

text: striped bass

text: LC

text: not applicable

text: not applicable

text: adults: fishes (alewives, herring, smelt, eels, flounder, gunnel, hake) inverts: squid crab worms, amphipods, crustaceans

text: fishbase.org

text: TRUE

text: a

characteristic: elevation

text: Host-associated

text: Animal

text: Animal corpus

characteristic: env

text: marine biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: gill

text: organic material

text: Morone saxatilis

characteristic: extraction date

text: columns

text: not applicable

text: not applicable

text: ATLgDNA

text: hook and line

text: Great Neck Creek

text: USA:NY:Long Island

characteristic: geo loc name

text: bays, rivers,

text: BE

text: shallow

text: neritic

text: not collected

text: UBERON:respiratory system

text: UBERON:mucus

text: UBERON:gill

text: striped bass

text: not collected

text: Morone saxatilis

text: not collected

text: striped bass

text: cm

text: grams

text: rod and reel

text: large amounts of visceral fat

text: large amounts of visceral fat

text: Western Atlantic

text: fish metagenome

text: Actinopterygii

text: temperate basses

text: Moronidae

text: Morone

text: Morone saxatilis

text: Morone saxatilis

text: Perciformes

text: not applicable

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: oviparous

text: brackish

text: anadromous

text: fish gill

text: g

text: gill tissue

text: gill, fin

text: fish metagenome

text: fall

text: Unknown

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: muddy bottom

text: soft bottom

text: Carangiform

text: crusier sprinter

text: FALSE

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: FALSE

text: temperate

text: rock associated

text: black seabass

characteristic: common name

text: LC

characteristic: control

text: not applicable

characteristic: control type

text: not applicable

characteristic: depth m

characteristic: description

text: crab, shrimp, small fish, lobsters

characteristic: diet

text: TRUE

text: c

text: Host-associated

text: Animal

text: Animal corpus

text: marine biome

text: animal-associated habitat

text: host-associated

text: gill

text: organic material

text: Centropristis striata

text: columns

text: not applicable

text: not applicable

text: ATLgDNA

text: hook and line

text: 10 mi SE Fire Island inlet

text: USA:NY:Long Island

text: rocky jetties, shallow water

text: IS

text: shallow

text: neritic

text: not collected

text: UBERON:respiratory system

text: UBERON:mucus

text: UBERON:gill

text: black seabass

text: not collected

text: Centropristis striata

text: not collected

text: black seabass

text: cm

text: grams

text: rod and reel

text: frozen at 9pm, right gill taken (potential contamination of left)

text: Western Atlantic

text: fish metagenome

text: Actinopterygii

text: Sea basses, groupers, and fairy basslets

text: Serranidae

text: Centropristis

text: Centropristis striata

text: Centropristis striata

text: Perciformes

text: not applicable

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: oviparous

text: marine

text: marine

text: fish gill

text: g

text: gill tissue

text: gill, fin

text: fish metagenome

text: summer

text: M

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: shipwreck

text: rock associated

text: Labriform

text: generalist

text: TRUE

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: FALSE

text: subtropical

characteristic: climate

text: soft bottom

text: silver perch

text: LC

text: not applicable

text: not applicable

text: crustaceans, worms, fishes

text: fishbase.org

text: TRUE

text: d

text: Host-associated

text: Animal

text: Animal corpus

text: marine biome

text: animal-associated habitat

text: host-associated

text: gill

text: organic material

text: Bairdiella chrysoura

text: columns

text: not applicable

text: not applicable

text: ATLgDNA

text: fish trap

text: Great Neck Creek

text: USA:NY:Long Island

text: sandy, muddy bottom, estuaries, some fw

text: BE

text: shallow

text: neritic

text: not collected

text: UBERON:respiratory system

text: UBERON:mucus

text: UBERON:gill

text: silver perch

text: not collected

text: Bairdiella chrysoura

text: not collected

text: silver perch

text: cm

text: grams

text: not applicable

text: not applicable

text: net

text: not applicable

text: not applicable

text: Western Atlantic

text: fish metagenome

text: Actinopterygii

text: drums or croakers

text: Sciaenidae

text: Bairdiella

text: Bairdiella chrysoura

text: Bairdiella chrysoura

text: Perciformes

text: not applicable

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: oviparous

text: brackish

text: brackish

text: fish gill

text: g

text: gill tissue

text: gill, fin

text: fish metagenome

text: summer

text: M

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: muddy bottom

text: soft bottom

text: Subcarangiform

text: generalist

text: FALSE

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: FALSE

text: temperate

text: soft bottom

text: mummichog

text: LC

text: not applicable

text: not applicable

text: plant detritus, mites, nematodes, worms, copepods

text: https://link.springer.com/article/10.1007/BF02696024, https://www.sciencedirect.com/science/article/abs/pii/0022098178901259

text: TRUE

text: e

characteristic: elevation

text: Host-associated

text: Animal

text: Animal corpus

characteristic: env

text: marine biome

characteristic: env biome

text: animal-associated habitat

characteristic: env feature

text: host-associated

characteristic: env package

text: gill

text: organic material

text: Fundulus heteroclitus

characteristic: extraction date

text: columns

text: not applicable

text: not applicable

text: ATLgDNA

text: fish trap

text: Great Neck Creek

text: USA:NY:Long Island

characteristic: geo loc name

text: saltwater marshes, creeks, fw, intertidal

text: BE

text: shallow

text: intertidal

text: not collected

text: UBERON:respiratory system

text: UBERON:mucus

text: UBERON:gill

text: mummichog

text: not collected

text: Fundulus heteroclitus

text: not collected

text: mummichog

text: cm

text: grams

text: not applicable

text: net

text: not applicable

text: not applicable

text: Western Atlantic

text: fish metagenome

text: Actinopterygii

text: topminnows and killisfishes

text: Fundulidae

text: Fundulus

text: Fundulus heteroclitus

text: Fundulus heteroclitus

text: Cyprinodontiformes

text: not applicable

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: oviparous

text: brackish

text: brackish

text: fish gill

text: g

text: gill tissue

text: gill, fin

text: fish metagenome

text: summer

text: F

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: muddy bottom

text: soft bottom

text: Esociform

text: accelerator

text: FALSE

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

characteristic: INSDC center name

text: public

text: FALSE

text: subtropical

text: pelagic

text: atlantic menhaden

characteristic: common name

text: LC

characteristic: control

text: not applicable

characteristic: control type

text: not applicable

characteristic: depth m

characteristic: description

text: phytoplankton (diatoms), zooplankon, crustaceans, annelid worms, detritutes

characteristic: diet

text: fishbase.org

text: TRUE

text: f

text: Host-associated

text: Animal

text: Animal corpus

text: marine biome

text: animal-associated habitat

text: host-associated

text: gill

text: organic material

text: Brevoortia tyrannus

text: columns

text: not applicable

text: not applicable

text: ATLgDNA

text: cast net

text: Great Neck Creek

text: USA:NY:Long Island

text: continental shelf, river, bay

text: BE

text: shallow

text: neritic

text: The ecology of marine fishes of california and adjacent waters 2006

text: not collected

text: UBERON:respiratory system

text: UBERON:mucus

text: UBERON:gill

text: atlantic menhaden (juvenile)

text: not collected

text: Brevoortia tyrannus

text: not collected

text: atlantic menhaden (juvenile)

text: cm

text: grams

text: not applicable

text: not applicable

text: net

text: not applicable

text: not applicable

text: Western Atlantic

text: fish metagenome

text: Actinopterygii

text: herrings, shads, sardines, menhadens

text: Clupeidae

text: Brevoortia

text: Brevoortia tyrannus

text: Brevoortia tyrannus

text: Clupeiformes

text: not applicable

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: oviparous

text: brackish

text: brackish

text: fish gill

text: g

text: gill tissue

text: gill, fin

text: fish metagenome

text: summer

text: Unknown

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: surface

text: soft bottom

text: Carangiform

text: crusier sprinter

text: FALSE

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: FALSE

text: subtropical

characteristic: climate

text: soft bottom

text: striped blenny

text: LC

text: not applicable

text: not applicable

text: zooplantkton

text: TRUE

text: g

text: Host-associated

text: Animal

text: Animal corpus

text: marine biome

text: animal-associated habitat

text: host-associated

text: gill

text: organic material

text: Lipophrys pholis

text: columns

text: not applicable

text: not applicable

text: ATLgDNA

text: fish trap

text: Great Neck Creek

text: USA:NY:Long Island

text: oyster beds, hard bottom

text: BE

text: shallow

text: neritic

text: not collected

text: UBERON:respiratory system

text: UBERON:mucus

text: UBERON:gill

text: striped blenny

text: not collected

text: Chasmodes bosquianus

text: not collected

text: striped blenny

text: cm

text: grams

text: not applicable

text: not applicable

text: net

text: not applicable

text: not applicable

text: Western Atlantic

text: fish metagenome

text: Actinopterygii

text: combtooth blennies

text: Blenniidae

text: Chasmodes

text: Chasmodes bosquianus

text: Chasmodes bosquianus

text: Blenniiformes

text: not applicable

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: oviparous

text: brackish

text: brackish

text: fish gill

text: g

text: gill tissue

text: gill, fin

text: fish metagenome

text: summer

text: M

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: muddy bottom

text: soft bottom

text: Cottiform

text: accelerator

text: TRUE

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: TRUE

text: d

characteristic: elevation

text: Free-living

text: Saline

text: water (saline)

text: SWdrysand

characteristic: env

text: marine biome

characteristic: env biome

text: coastal zone

characteristic: env feature

text: water

characteristic: env package

text: SWnear

text: sea water

text: not applicable

text: not applicable

text: not applicable

text: not applicable

characteristic: extraction date

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: USA:CA:San Diego

characteristic: geo loc name

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: cm

text: not applicable

text: grams

text: not collected

text: not applicable

text: not applicable

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: seawater metagenome

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: SIO

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: seawater

text: not applicable

text: sea water

text: not applicable

text: seawater metagenome

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: source

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

text: public

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

characteristic: common name

text: not applicable

text: not applicable

characteristic: control

text: not applicable

characteristic: control type

text: not applicable

text: not applicable

characteristic: depth m

text: not applicable

text: not applicable

characteristic: description

text: not applicable

characteristic: diet

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: TRUE

text: a

text: Control

text: Negative

text: Sterile water blank

text: not applicable

text: urban biome

text: research facility

text: misc environment

text: control negative

text: sterile water

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: clearmag beads KF

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: USA:CA:San Diego

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: metagenome

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: control blank

text: not applicable

text: negative control

text: not applicable

text: metagenome

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: anonymized name

text: not applicable

text: not applicable

text: not applicable

text: not applicable

characteristic: climate

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: TRUE

text: c

text: Control

text: Negative

text: Sterile water blank

text: not applicable

text: urban biome

text: research facility

text: misc environment

text: control negative

text: sterile water

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: USA:CA:San Diego

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: cm

text: not applicable

text: grams

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: metagenome

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: SIO

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: control blank

text: not applicable

text: negative control

text: not applicable

text: metagenome

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: zymo

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: TRUE

text: g

characteristic: elevation

text: Control

text: Positive

text: Mock community

text: not applicable

characteristic: env

text: urban biome

characteristic: env biome

text: research facility

characteristic: env feature

text: misc environment

characteristic: env package

text: control positive

text: cell culture

text: not applicable

text: not applicable

text: not applicable

text: not applicable

characteristic: extraction date

text: clearmag beads KF

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: USA:CA:San Diego

characteristic: geo loc name

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: synthetic metagenome

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: SIO

text: not collected

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: control positive

text: not applicable

text: positive control

text: not applicable

text: synthetic metagenome

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: sink

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CNRS

characteristic: INSDC center name

text: public

unit: m

characteristic: altitude

text: air

characteristic: broad-scale environmental context

characteristic: collection date

text: metagenome

characteristic: description

text: mountain

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: temperate forest

characteristic: local environmental context

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: Illumina HiSeq

characteristic: sequencing method

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CNRS

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: air

text: metatranscriptome

text: mountain

text: France

text: temperate forest

text: metagenome

text: metagenome

text: Illumina HiSeq


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

tag: Namespace:Tree of Life Programme

text: ELIABENITOGUTIERREZ

characteristic: collected by

text: UNICAMBRIDGE

characteristic: collecting institution

characteristic: collection date

text: amphioxus

characteristic: common name

text: North Sea

text: not collected

text: not collected

text: North Sea

characteristic: geographic location (region and locality)

text: NOT COLLECTED

characteristic: habitat

text: Elia Benito-Gutierrez

characteristic: identified by

text: University of Cambridge

text: adult

characteristic: lifestage

text: Branchiostoma lanceolatum

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

text: Branchiostoma lanceolatum

text: MALE

characteristic: sex

characteristic: specimen id

text: NOT COLLECTED

characteristic: specimen voucher

text: N

characteristic: symbiont

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ELIABENITOGUTIERREZ

text: UNICAMBRIDGE

text: Indian Ocean

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Indian Ocean

text: NOT COLLECTED

text: Elia Benito-Gutierrez

text: University of Cambridge

text: adult

text: Epigonichthys maldivensis

characteristic: organism

text: WHOLE ORGANISM

text: ToL

characteristic: project name

text: Epigonichthys maldivensis

text: NOT COLLECTED

text: NOT COLLECTED

text: N

characteristic: title


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

text: ELIABENITOGUTIERREZ

characteristic: collected by

text: UNICAMBRIDGE

characteristic: collecting institution

characteristic: collection date

text: Indian Ocean

text: not collected

text: not collected

text: Indian Ocean

characteristic: geographic location (region and locality)

text: NOT COLLECTED

characteristic: habitat

text: Elia Benito-Gutierrez

characteristic: identified by

text: University of Cambridge

text: adult

characteristic: lifestage

text: Asymmetron lucayanum

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

text: Asymmetron lucayanum

text: NOT COLLECTED

characteristic: sex

characteristic: specimen id

text: NOT COLLECTED

characteristic: specimen voucher

text: N

characteristic: symbiont


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

text: Tree of Life Programme

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ELIABENITOGUTIERREZ

text: UNICAMBRIDGE

text: amphioxus

characteristic: common name

text: North Sea

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: North Sea

text: NOT COLLECTED

text: Elia Benito-Gutierrez

text: University of Cambridge

text: adult

text: Branchiostoma lanceolatum

characteristic: organism

text: WHOLE ORGANISM

characteristic: sample same as

text: Branchiostoma lanceolatum

text: MALE

text: NOT COLLECTED

text: N

characteristic: tolid


text: Sanger Institute

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC center name

text: public

text: ELIABENITOGUTIERREZ

characteristic: collected by

text: UNICAMBRIDGE

characteristic: collecting institution

characteristic: collection date

text: Indian Ocean

text: not collected

text: not collected

text: Indian Ocean

characteristic: geographic location (region and locality)

text: NOT COLLECTED

characteristic: habitat

text: Elia Benito-Gutierrez

characteristic: identified by

text: University of Cambridge

text: adult

characteristic: lifestage

text: Epigonichthys maldivensis

text: TERMINAL BODY

characteristic: organism part

characteristic: project name

characteristic: sample derived from

text: Epigonichthys maldivensis

text: NOT COLLECTED

characteristic: sex

characteristic: specimen id

text: NOT COLLECTED

characteristic: specimen voucher

text: N

characteristic: symbiont

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ELIABENITOGUTIERREZ

text: UNICAMBRIDGE

text: Indian Ocean

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Indian Ocean

text: NOT COLLECTED

text: Elia Benito-Gutierrez

text: University of Cambridge

text: adult

text: Asymmetron lucayanum

characteristic: organism

text: TERMINAL BODY

text: Asymmetron lucayanum

text: NOT COLLECTED

text: NOT COLLECTED

text: N

characteristic: tolid


text: EMG

characteristic: INSDC center name

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR5665903 of study SRP108960.

characteristic: description

text: Digesta

characteristic: environmental medium

text: China

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Cecum

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

text: Metagenomic Analysis of Cecal Microbiome of Landrace Finishing Pigs with High and Low Feed Efficiency

characteristic: project name

characteristic: sample derived from

text: uncultured Bacteroidales bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5665903_bin.101_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: CheckM

text: Digesta

text: China

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: pig gut metagenome

text: Cecum

text: pig gut metagenome

text: uncultured Lactobacillus sp.

characteristic: organism

text: uncultured Lactobacillus sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR5665903_bin.102_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Digesta

characteristic: environmental medium

text: China

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Cecum

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Prevotella sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Prevotella sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5665903_bin.103_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: CheckM

text: Digesta

text: China

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: pig gut metagenome

text: Cecum

text: pig gut metagenome

text: uncultured Bacteroidales bacterium

characteristic: organism

text: uncultured Bacteroidales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR5665903_bin.104_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Digesta

characteristic: environmental medium

text: China

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Cecum

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Prevotellaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Prevotellaceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5665903_bin.105_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: CheckM

text: Digesta

text: China

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: pig gut metagenome

text: Cecum

text: pig gut metagenome

text: Desulfovibrio piger

characteristic: organism

text: Desulfovibrio piger

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR5665903_bin.107_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Digesta

characteristic: environmental medium

text: China

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Cecum

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: Phascolarctobacterium succinatutens

characteristic: project name

characteristic: sample derived from

text: Phascolarctobacterium succinatutens

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5665903_bin.108_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: CheckM

text: Digesta

text: China

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: pig gut metagenome

text: Cecum

text: pig gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR5665903_bin.109_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Digesta

characteristic: environmental medium

text: China

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Cecum

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Roseburia sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Roseburia sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5665903_bin.11_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: CheckM

text: Digesta

text: China

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: pig gut metagenome

text: Cecum

text: pig gut metagenome

text: uncultured Bacteroidales bacterium

characteristic: organism

text: uncultured Bacteroidales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR5665903_bin.112_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Digesta

characteristic: environmental medium

text: China

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Cecum

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Bacteroidales bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5665903_bin.114_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: CheckM

text: Digesta

text: China

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: pig gut metagenome

text: Cecum

text: pig gut metagenome

text: Megasphaera elsdenii

characteristic: organism

text: Megasphaera elsdenii

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR5665903_bin.115_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Digesta

characteristic: environmental medium

text: China

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Cecum

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5665903_bin.116_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: CheckM

text: Digesta

text: China

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: pig gut metagenome

text: Cecum

text: pig gut metagenome

text: uncultured Lachnobacterium sp.

characteristic: organism

text: uncultured Lachnobacterium sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR5665903_bin.117_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR5665903 of study SRP108960.

characteristic: description

text: Digesta

characteristic: environmental medium

text: China

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Cecum

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Solobacterium sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Solobacterium sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5665903_bin.118_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: CheckM

text: Digesta

text: China

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: pig gut metagenome

text: Cecum

text: pig gut metagenome

text: uncultured bacterium

characteristic: organism

text: Metagenomic Analysis of Cecal Microbiome of Landrace Finishing Pigs with High and Low Feed Efficiency

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR5665903_bin.119_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Digesta

characteristic: environmental medium

text: China

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Cecum

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Bacteroidales bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5665903_bin.120_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: CheckM

text: Digesta

text: China

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: pig gut metagenome

text: Cecum

text: pig gut metagenome

text: uncultured Treponema sp.

characteristic: organism

text: uncultured Treponema sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR5665903_bin.121_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Digesta

characteristic: environmental medium

text: China

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Cecum

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Bacteroidales bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5665903_bin.122_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Pig digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: CheckM

text: Digesta

text: China

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: pig gut metagenome

text: Cecum

text: pig gut metagenome

text: uncultured Bacteroidales bacterium

characteristic: organism

text: uncultured Bacteroidales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR5665903_bin.126_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Pig digestive system

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Digesta

characteristic: environmental medium

text: China

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: Cecum

characteristic: local environmental context

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroides sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Bacteroides sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5665903_bin.128_metaWRAP_v1.3_MAG