text: West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

text: public

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: Scotland

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ROTHAMSTED RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:ROTHAMSTED RESEARCH

characteristic: Submitter Id

characteristic: collection date

text: cabbage seed weevil

characteristic: common name

text: Annotated genome assembly of Ceutorhynchus assimilis. HiFiasm used to assemble HiFi reads and haplotigs purged. Manual curation and Hi-C to bring to chromosome level. Single primary sequence assembly, not haplotype assembled. Maker annotation pipeline used with both transcriptome transfer and de novo gene prediction as inputs to Evigene to pick best gene models. Curation of P450, ABC, UGT, IRAC gene models where RNA-seq evidence was present. Single individual, unknown sex used for HiFi PacBio and Hi-C Illumina reads. Collected from Rothamsted Farm and Cross Farm in Harpenden during Oilseed Rape harvest in July 2020. Cross Farm GPS 51.803468, -0.331117

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Ceutorhynchus assimilis

characteristic: organism

text: Ceutorhynchus assimilis

text: Annotated genome assembly of Ceutorhynchus assimilis from the Pest Genomics Initiative.

characteristic: title


text: ROTHAMSTED RESEARCH

text: public

text: crucifer flea beetle

text: Genome assembly of Phyllotreta cruciferae. HiFiasm used to assemble HiFi reads and haplotigs purged. Manual curation and Hi-C to bring to chromosome level. HiFiasm does produce complete chromosome haplotigs for many of the chromosomes for this species, as it's a small genome. Suggest future update to would be to rerun haplotig assembly software like hifiasm or others and reannotate haplotype version. Single primary sequence assembly, not haplotype assembled. Single individual, unknown sex used for HiFi PacBio and Hi-C Illumina reads. Mixed sample with Phyllotreta striolata but one individual taken that is correct species. Taken from Canada in September 2020.

text: Canada

text: Phyllotreta cruciferae

text: Phyllotreta cruciferae

text: Genome assembly of Phyllotreta cruciferae from the Pest Genomics Initiative.


text: ROTHAMSTED RESEARCH

text: public

text: stripe beetle

text: Annotated genome assembly of Phyllotreta striolata. HiFiasm used to assemble HiFi reads and haplotigs purged. Manual curation and Hi-C to bring to chromosome level. Single primary sequence assembly, not haplotype assembled. Maker annotation pipeline used with both transcriptome transfer and de novo gene prediction as inputs to Evigene to pick best gene models. Curation of P450, ABC, UGT, IRAC gene models where RNA-seq evidence was present. Single individual, unknown sex used for HiFi PacBio and Hi-C Illumina reads. Mixed sample with Phyllotreta cruciferae. taken from Canada in September 2020.

text: Canada

text: Phyllotreta striolata

text: Phyllotreta striolata

text: Annotated genome assembly of Phyllotreta striolata from the Pest Genomics Initiative.


text: ROTHAMSTED RESEARCH

text: public

text: southern green stink bug

text: Annotated genome of Nezara viridula from the Pest Genomics Initiative. Single individual CLR Nezara viridula genome assembly using Falcon with haplotig removal. Manual curation and Hi-C to scaffold to chromosome level. Pilon used for error correction so may be some minor gains using freebayes to update. The result was a very good assembly. Additional RNA-seq data would benefit the annotation and improve further. Maker annotation pipeline used with both transcriptome transfer and de novo gene prediction as inputs to Evigene to pick best gene models. Curation of P450, ABC, UGT, IRAC gene models where RNA-seq evidence was present. PacBio CLR reads for the Nezara viridula genome. Unknown sex individual taken for CLR PacBio and 10X, multi-individual for Hi-C sequencing. Insecticide suseptible individuals.

text: France

text: Nezara viridula

text: Nezara viridula

text: Annotated genome assembly of Nezara viridula genome from the Pest Genomics Initiative.


text: ROTHAMSTED RESEARCH

text: public

text: cabbage stem flea beetle

text: Annotated genome assembly of Psylliodes chrysocephala. The resulting individual used for HiFi and multi-individual used for Hi-C has a parasitic wasp present (10% genome size) so I had very good coverage of the wasp and got a good assembly of that. This went to the PhD PGI linked project. However the beetle coverage was then reduced to x12 so the assembly was not as continuous as it could have been. But despite that the assembly is reasonably good, chromosome level. Freebayes route used for error correction. I suggest to improve would be to repeat using non-infected individual HiFi. Included in the data set is 10X illumina library data of non-infected individual and male and female Illumina genome resequencing too. Manual curation and Hi-C to bring to chromosome level. Single primary sequence assembly, not haplotype assembled. Maker annotation pipeline used with both transcriptome transfer and de novo gene prediction as inputs to Evigene to pick best gene models. Curation of P450, ABC, UGT, IRAC gene models where RNA-seq evidence was present. Unknown sex individual used for 10X and then male 10X and female 10X samples. Single individual with parastoid wasp taken for PacBio HiFi. Single adult beetle from field sample collected at Rothamsted farm on 28 July 2017. GPS 51.8093, -0.3548

text: United Kingdom

text: Psylliodes chrysocephala

text: Psylliodes chrysocephala

text: Annotated genome assembly of Psylliodes chrysocephala from the Pest Genomics Initiative.


text: ROTHAMSTED RESEARCH

text: public

text: cotton aphid

text: Annotated genome assembly of Aphis gossypii from the Pest Genomics Initiative. Multi-individual but clonal so only 2 haplotypes observed when snp/indel calling so potentially equivalent to single individual data. Resulting Falcon assembly were separated to two species using Aphis gossypii Illumina mapping. Haplotig removal and manual curation. Hi-C used to scaffold to chromosome level. Maker annotation pipeline used with both transcriptome transfer and de novo gene prediction as inputs to Evigene to pick best gene models. Curation of P450, ABC, UGT, IRAC gene models where RNA-seq evidence was present. Multi-individual taken for CLR PacBio (contaminated with myzus persicae) and multi-individual for Hi-C and 10X illumina sequencing. Bayer culture since 2001, collected from cucumber greehouse in Hohenheim Germany.

text: Germany

text: Aphis gossypii

text: Aphis gossypii

text: Annotated genome of Aphis gossypii from the Pest Genomics Initiative.


text: ROTHAMSTED RESEARCH

text: public

text: cucumber beetle

text: Annotated genome assembly of Diabrotica balteata. Multi-individual CLR PacBio Falcon assembly followed by haplotig removal and Hi-C chromosome level scaffolding. Freebayes route used for error correction. Maker annotation pipeline used with both transcriptome transfer and de novo gene prediction as inputs to Evigene to pick best gene models. Curation of P450, ABC, UGT, IRAC gene models where RNA-seq evidence was present. Unknown sex multi-individual used for PacBio CLR and Hi-C. 10X Illumina reads single individual. Not chemical resistance. collected in the USA 27th July 2011

text: USA

text: Diabrotica balteata

text: Diabrotica balteata

text: Annotated genome assembly of Diabrotica balteata from the Pest Genomics Initiative.


Bemisia tabaci_genome

text: ROTHAMSTED RESEARCH

text: public

text: Bemisia tabaci_genome

text: Silver leaf whitefly

text: Annotated genome assembly of Bemisia tabaci Q-type almeria. Falcon was used to assembly CLR data and haplotig removal. Manual curation and Hi-C scaffolding using juicer and 3d-dna. Error correction was done using Freebayes route. Maker annotation pipeline used with both transcriptome transfer and de novo gene prediction as inputs to Evigene to pick best gene models. Curation of P450, ABC, UGT, IRAC gene models where RNA-seq evidence was present. Unknown sex multi-individual used for PacBio CLR and Hi-C. Originally sourced from Spain. Obtained by Syngenta from Rothamsted Research in 2007

text: United Kingdom

text: Bemisia tabaci

text: Bemisia tabaci

text: Annotated genome assembly of Bemisia tabaci from the Pest Genomics Initiative.


text: ROTHAMSTED RESEARCH

text: public

text: sugarcane borer

text: Annotated genome assembly of Diatraea saccharalis. Hifiasm used with HiFi read data set followed by haplotig removal. Error correction using the Freebayes route. Hi-C used to produce chromosome level assembly with manual curation. Maker annotation pipeline used with both transcriptome transfer and de novo gene prediction as inputs to Evigene to pick best gene models. Curation of P450, ABC, UGT, IRAC gene models where RNA-seq evidence was present. Unknown sex single individual used for PacBio CLR and, HiFi and Hi-C. Sourced on 03.25.2020; USA; 700 Chesterfield Pwky W Chesterfield, MO 63017 (Bayer)

text: USA

text: Diatraea saccharalis

text: Diatraea saccharalis

text: Annotated genome assembly of Diatraea saccharalis from the Pest Genomics Initiative.


Phaedon cochleariae_genome

text: ROTHAMSTED RESEARCH

text: public

text: Phaedon cochleariae_genome

text: mustard beetle

text: Annotated genome assembly of Phaedon cochleariae. HiFi data assembled using Hifiasm. Haplotigs purged. Freebayes route used for error correction with Hi-C data and Hi-C used to produce chromosome level assembly with juicer/3d-dna. Maker annotation pipeline used with both transcriptome transfer and de novo gene prediction as inputs to Evigene to pick best gene models. Curation of P450, ABC, UGT, IRAC gene models where RNA-seq evidence was present. Single individual, unknown sex used for HiFi PacBio and Hi-C Illumina reads. Sample taken on 01.02.1961; UK; England (Rothamsted Experimental Station)

text: United Kingdom

text: Phaedon cochleariae

text: Phaedon cochleariae

text: Annotated genome assembly of Phaedon cochleariae from the Pest Genomics Initiative.


text: ROTHAMSTED RESEARCH

text: public

text: soybean looper

text: PacBio HiFi reads for the Chrysodeixis includens genome. Unknown sex individual taken for nanopore, 10X Illumina, and multi-individual for Hi-C sequencing (Arima kit). One individual HiFi using 1 smrt cell but low coverage. 1988 from South Carolina USA. More recent collections from Athens, Georgia, USA.

text: USA

text: Chrysodeixis includens

text: Chrysodeixis includens

text: PacBio HiFi reads for the Chrysodeixis includens genome from the Pest Genomics Initiative.


text: public

tag: Namespace:West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: Scotland

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF CAMBRIDGE

characteristic: Submitter Id

text: ArrayExpress

characteristic: cell line

text: pluripotent stem cell

characteristic: cell type

text: white-tufted-ear marmoset

characteristic: common name

text: Protocols: cmPSC were encapsulated in agarose microgels and transferred into conventional tissue culture plates with or without mouse embryonic fibroblasts (MEFs) in differentiation permissive, serum-free N2B27 supplemented with 1% Matrigel, 2.5% Chemically Defined Lipids (Gibco) and 1% Penicillin-Streptomycin. Signalling inhibitors and activators were then added to this base medium: FGF (bFGF, 100 ng/ml, Cambridge Stem Cell Institute), CHIR (CHIR99021, 3 µM, Cambridge Stem Cell Institute), XAV (XAV939, 3 µM, Cell Guidance Systems SM38-200), ACTA (Activin A, 20 ng/ml, Cambridge Stem Cell Institute), SB43 (SB431542, 10 µM, Tocris 1614), BMP4 (BMP4, 20 ng/ml, R&D 314-BP). For each condition, a representative pool of 20-30 microgels were randomly selected for profiling by single-cell RNA sequencing. Structures were released from microgels by incubation with 1 U/ml Agarase (Thermo Fisher Scientific, EO0461) and dissociated for 10-15 minutes in 0.25% Trypsin-EDTA (Gibco, 25200056) followed by manual dissociation in N2B27 using a blunted microcapillary pipette. Single cells were isolated manually using a microcapillary pipette, transferred immediately into 4 µl single cell lysis buffer and snap frozen. RNA separation was performed using biotinylated oligo-dT30VN-tailed oligonucleotides (IDT) conjugated to Dynabeads Streptavidin C1 in an RNAse-inhibitor supplemented buffer solution. Sequencing libraries were prepared according to an adapted version of the G&T protocol previously described. Samples were transferred to a 96-well plate and prepared for both transcriptome and methylome sequencing, by physical separation of genomic DNA (gDNA) from messenger RNA (mRNA).

characteristic: description

text: embryo

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: coculture with mouse embryonic fibroblasts

characteristic: growth condition

text: Callithrix jacchus

text: Callithrix jacchus

text: inner cell mass

characteristic: organism part

text: Callithrix jacchus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CAMBRIDGE

text: public

text: ArrayExpress

characteristic: broker name

text: pluripotent stem cell

text: white-tufted-ear marmoset

text: embryo

text: normal

text: wild type genotype

text: monoculture

text: Callithrix jacchus

characteristic: organism

text: Callithrix jacchus

text: inner cell mass

text: Callithrix jacchus

characteristic: title


E-MTAB-11056:Sample 1

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11056:Sample 1

tag: Namespace:Hagai Lab The Shmunis School of Biomedicine and Cancer Research Faculty of Life Sciences Tel Aviv University

text: ArrayExpress

text: fibroblast

text: Protocols: Cells were washed with PBS and then trypsinized. Human and Rousettus samples of the same treatment condition (poly(I:C) resp. lipofectamine) were pooled together. Cells were stimulated with 1 ug/mL of High-Molecular Weight poly(I:C) (InvivoGen, Cat. Code: tlrl-pic), transfected with 2 uL/mL Lipofectamin 2000 (Thermo Fisher Scientific), for 4 hours before collection. 7000 live, single cells were loaded on to each of the Chromium Controllers (10x Genomics, Pleasanton, CA, USA), then cDNA synthesis and amplification were performed as per the 10x Genomics protocol. Sequencing libraries were generated using the Single Cell 3' Reagent Kit (version 3.1) as per the 10x Genomics protocol.

text: adult

text: normal

text: wild type genotype

text: mixed sample

text: mixed sample

text: dermis

text: mixed sample

text: male

characteristic: sex

text: Rousettus aegyptiacus; Homo sapiens

characteristic: species mix

text: poly(I:C)

characteristic: stimulus

unit: hour

characteristic: time

text: Sample 1


E-MTAB-11056:Sample 2

text: Hagai Lab The Shmunis School of Biomedicine and Cancer Research Faculty of Life Sciences Tel Aviv University

text: public

text: E-MTAB-11056:Sample 2

characteristic: Submitter Id

text: ArrayExpress

text: fibroblast

characteristic: cell type

characteristic: description

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: mixed sample

text: mixed sample

text: dermis

characteristic: organism part

text: mixed sample

text: male

text: Rousettus aegyptiacus; Homo sapiens

text: lipofectamine

text: Sample 2


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSERM Gustave Roussy institute

text: public

tag: Namespace:INSERM Gustave Roussy institute

text: ArrayExpress

characteristic: broker name

text: CD34-negative, CD41-positive, CD42-positive megakaryocyte cell

text: human

characteristic: common name

text: Protocols: The CD41+/CD42+ MK were sorted (10 000 to 30 000 cells). Cells were submitted to cell lysis, transposition, and purification steps according to Illumina protocol. The transposed DNA fragments were amplified by PCR 12 times using adapters from the Nextera Index Kit (Illumina). PCR purification was performed using MinElute PCR Purification Kit (Qiagen, 28004) to remove large fragments and remaining primers. Library quality was assessed using an Agilent 2100 Bioanalyzer (Agilent Technologies 5067-4626).

text: embryo

text: Down syndrome

text: GATA1s mutation, MPL mutation and SMC3 mutation

text: disomy

characteristic: karyotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: embryo

text: induced pluripotent stem cell

characteristic: progenitor cell type

text: Homo sapiens

characteristic: title


text: INSERM Gustave Roussy institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: human

text: embryo

text: Down syndrome

text: GATA1s mutation and SMC3 mutation

text: trisomy

text: Homo sapiens

text: Homo sapiens

text: embryo

text: induced pluripotent stem cell

text: Homo sapiens


text: INSERM Gustave Roussy institute

text: public

text: ArrayExpress

characteristic: cell type

text: human

characteristic: description

text: embryo

characteristic: developmental stage

text: Down syndrome

characteristic: disease

text: SMC3 mutation

characteristic: genotype

text: trisomy

text: Homo sapiens

text: Homo sapiens

text: embryo

characteristic: organism part

text: induced pluripotent stem cell

text: Homo sapiens


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSERM Gustave Roussy institute

text: public

text: ArrayExpress

characteristic: broker name

text: human

characteristic: common name

text: embryo

text: Down syndrome

text: trisomy

text: Homo sapiens

text: Homo sapiens

text: embryo

text: induced pluripotent stem cell

text: Homo sapiens


text: INSERM Gustave Roussy institute

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: human

text: embryo

text: Down syndrome

text: GATA1s mutation

text: trisomy

characteristic: karyotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: embryo

text: induced pluripotent stem cell

characteristic: progenitor cell type

text: Homo sapiens

characteristic: title


text: INSERM Gustave Roussy institute

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: cell type

text: human

characteristic: description

text: embryo

text: Down syndrome

text: wild type genotype

text: trisomy

text: Homo sapiens

text: Homo sapiens

text: embryo

text: induced pluripotent stem cell

text: Homo sapiens


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: JLU

text: public

characteristic: culture collection

text: Xanthomonas fragariae PD885 sequencing

text: Xanthomonas fragariae

text: Xanthomonas fragariae

characteristic: strain

text: Xanthomonas fragariae PD885

text: type strain of Xanthomonas fragariae

characteristic: type material


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ROTHAMSTED RESEARCH

characteristic: INSDC center name

text: public

text: Wolbachia_endosymbiont_of_Psylliodes chrysocephala_genome

characteristic: collection date

text: Wolbachia

characteristic: common name

text: Wolbachia endosymbiont of Psylliodes chrysocephala genome assembly. The resulting individual used for HiFi and multi-individual used for Hi-C has a parasitic wasp present (10% genome size) so I had very good coverage of the wasp and got a good assembly of that. This went to the PhD PGI linked project. However the beetle coverage was then reduced to x12 so the assembly was not as continuous as it could have been. But despite that the assembly is reasonably good, chromosome level. Freebayes route used for error correction. I suggest to improve would be to repeat using non-infected individual HiFi. Included in the data set is 10X illumina library data of non-infected individual and male and female Illumina genome resequencing too. Manual curation and Hi-C to bring to chromosome level. Single primary sequence assembly, not haplotype assembled. Maker annotation pipeline used with both transcriptome transfer and de novo gene prediction as inputs to Evigene to pick best gene models. Curation of P450, ABC, UGT, IRAC gene models where RNA-seq evidence was present. Unknown sex individual used for 10X and then male 10X and female 10X samples. Single individual with parastoid wasp taken for PacBio HiFi. Single adult beetle from field sample collected at Rothamsted farm on 28 July 2017. GPS 51.8093, -0.3548

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wolbachia endosymbiont of Psylliodes chrysocephala from the Pest Genomics Initiative.


text: ROTHAMSTED RESEARCH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Wolbachia_endosymbiont_of_Phyllotreta_striolata_genome

text: Wolbachia

text: Wolbachia endosymbiont of Phyllotreta striolata assembly. HiFiasm used to assemble HiFi reads and haplotigs purged. Manual curation and Hi-C to bring to chromosome level. Single primary sequence assembly, not haplotype assembled. Maker annotation pipeline used with both transcriptome transfer and de novo gene prediction as inputs to Evigene to pick best gene models. Curation of P450, ABC, UGT, IRAC gene models where RNA-seq evidence was present. Single individual, unknown sex used for HiFi PacBio and Hi-C Illumina reads. Mixed sample with Phyllotreta cruciferae. taken from Canada in September 2020.

text: Canada

characteristic: organism

text: Wolbachia endosymbiont of Phyllotreta striolata assembly from the Pest Genomics Initiative.

characteristic: title


text: ROTHAMSTED RESEARCH

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Wolbachia_endosymbiont_of_Chironomus_riparius

characteristic: Submitter Id

text: Wolbachia

text: Wolbachia endosymbiont of Chironomus riparius genome assembly. Single Female individual taken for HiFi PacBio and multi-individual for Hi-C sequencing. Bought from a company that originally sourced in Germany.

text: Germany

text: Wolbachia endosymbiont of Chironomus riparius genome assembly from the Pest Genomics Initiative.


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ROTHAMSTED RESEARCH

text: public

text: Assembled genome of wolbachia endosymbiont of Ceutorhynchus assimilis. Assembled to two scaffolds. HiFiasm used to assemble HiFi reads Single individual, unknown sex used for HiFi PacBio and Hi-C Illumina reads. Collected from Rothamsted Farm and Cross Farm in Harpenden during Oilseed Rape harvest in July 2020. Cross Farm GPS 51.803468, -0.331117

characteristic: description

text: United Kingdom

text: Wolbachia endosymbiont of Ceutorhynchus assimilis from the Pest Genomics Initiative.


text: ROTHAMSTED RESEARCH

text: public

text: Rickettsia_endosymbiont_Ceutorhynchus_assimilis

text: Assembled genome of Rickettsia endosymbiont of Ceutorhynchus assimilis. HiFiasm used to assemble HiFi reads Single individual, unknown sex used for HiFi PacBio and Hi-C Illumina reads. Collected from Rothamsted Farm and Cross Farm in Harpenden during Oilseed Rape harvest in July 2020. Cross Farm GPS 51.803468, -0.331117

text: United Kingdom

text: Rickettsia endosymbiont of Ceutorhynchus assimilis from the Pest Genomics Initiative.


text: West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

text: public

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: Scotland

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ROTHAMSTED RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: unidentified_bacterial_endosymbiont_Chironomus_riparius

characteristic: Submitter Id

characteristic: collection date

text: unidentified bacterial endosymbiont of Chironomus riparius genome assembly. Single Female individual taken for HiFi PacBio and multi-individual for Hi-C sequencing. Bought from a company that originally sourced in Germany.

text: Germany

characteristic: geographic location (country and/or sea)

text: unidentified bacterial endosymbiont

characteristic: organism

text: unidentified bacterial endosymbiont

text: unidentified bacterial endosymbiont of Chironomus riparius genome assembly from the Pest Genomics Initiative.

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: DALHOUSIE UNIVERSITY

text: public

tag: Namespace:DALHOUSIE UNIVERSITY

text: human gut

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Israel

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: CDED

characteristic: project name

text: human gut metagenome

text: illumina

characteristic: sequencing method

text: Gut microbiome of CD patients under nutritional therapy


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DALHOUSIE UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: human-gut

text: human-gut

text: feces

text: Israel

text: human-gut

text: metagenome

text: human gut metagenome

text: CDED study

text: human gut metagenome

text: Illumina

text: 16S sequences from gut microbiome


characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: SRA accession

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text: Child Health Research Foundation

text: public

text: ena-SAMPLE-TAB-31-10-2021-12:43:39:176-25263


text: Child Health Research Foundation

text: public

text: ena-SAMPLE-TAB-31-10-2021-12:43:39:176-25264


text: Child Health Research Foundation

text: public

text: ena-SAMPLE-TAB-31-10-2021-12:43:39:176-25265


text: ROTHAMSTED RESEARCH

text: public

text: Spiroplasma_endosymbiont_of_Phyllotreta_cruciferae

characteristic: collection date

text: Genome assembly Spiroplasma endosymbiont of Phyllotreta cruciferae. HiFiasm used to assemble HiFi reads and haplotigs purged. Manual curation and Hi-C to bring to chromosome level. HiFiasm does produce complete chromosome haplotigs for many of the chromosomes for this species, as it's a small genome. Suggest future update to would be to rerun haplotig assembly software like hifiasm or others and reannotate haplotype version. Single primary sequence assembly, not haplotype assembled. Single individual, unknown sex used for HiFi PacBio and Hi-C Illumina reads. Mixed sample with Phyllotreta striolata but one individual taken that is correct species. Taken from Canada in September 2020.

characteristic: description

text: Canada

characteristic: geographic location (country and/or sea)

text: Genome assembly spiroplasma endosymbiont of Phyllotreta cruciferae from the Pest Genomics Initiative.


characteristic: ENA-CHECKLIST

text: ROTHAMSTED RESEARCH

text: public

text: Wolbachia_endosymbiont_of_Phyllotreta_cruciferae

text: Genome assembly Wolbachia endosymbiont of Phyllotreta cruciferae. HiFiasm used to assemble HiFi reads and haplotigs purged. Manual curation and Hi-C to bring to chromosome level. HiFiasm does produce complete chromosome haplotigs for many of the chromosomes for this species, as it's a small genome. Suggest future update to would be to rerun haplotig assembly software like hifiasm or others and reannotate haplotype version. Single primary sequence assembly, not haplotype assembled. Single individual, unknown sex used for HiFi PacBio and Hi-C Illumina reads. Mixed sample with Phyllotreta striolata but one individual taken that is correct species. Taken from Canada in September 2020.

text: Canada

text: Genome assembly Wolbachia endosymbiont of Phyllotreta cruciferae from the Pest Genomics Initiative.


characteristic: ENA-LAST-UPDATE

text: public

tag: Namespace:The University of Zurich (UZH, Switzerland)

unit: day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

text: Protocols: Two 3-day-old seedlings per well were transferred into transparent 24-well plates containing 1 mL liquid MS media, sealed with porous tape and grown for a further 9 days. Media was then exchanged for 500 µL fresh MS media and left overnight. In the morning a further 480 µL of fresh media was added. 9.5 h later 20 µL treatment/mock was added and seedlings were harvested after 30 min. Mock treatment was with water. All seedlings were ground in liquid nitrogen. Arabidopsis thaliana seeds grown on plates were surface sterilized using chlorine gas for 5-6 h and sown on 1/2 Murashige and Skoog (MS) media, 1 % sucrose, and 0.8 % agar and stratified at 4 °C for 2-3 days. Plates were then transferred to 22 °C under a 16-h photoperiod. Total RNA was extracted using Trizol reagent according to the manufacturer’s instructions and DNAase treatment/RNA cleanup was performed using the RNeasy kit. Library prep and sequencing were performed by Novogene using a NEB Next® Ultra™ RNA Library Prep Kit

text: seedling development stage

characteristic: developmental stage

characteristic: ecotype

text: wild type genotype

characteristic: genotype

text: pool of two seedlings

characteristic: individual

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole plant

text: Arabidopsis thaliana


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: The University of Zurich (UZH, Switzerland)

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: thale cress

text: seedling development stage

text: wild type genotype

text: pool of two seedlings

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: whole plant

characteristic: organism part

text: Arabidopsis thaliana

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: thale cress

characteristic: description

text: seedling development stage

text: wild type genotype

text: pool of two seedlings

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole plant

text: Arabidopsis thaliana

text: 100 nM CTNIP4

characteristic: stimulus


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: public

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

text: seedling development stage

characteristic: developmental stage

text: pool of two seedlings

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole plant

text: Arabidopsis thaliana


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

characteristic: INSDC center name

text: public

text: ArrayExpress

text: thale cress

text: seedling development stage

characteristic: ecotype

characteristic: genotype

text: pool of two seedlings

characteristic: individual

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole plant

text: Arabidopsis thaliana

text: 100 nM CTNIP4


text: CSIR INSTITUTE OF MICROBIAL TECHNOLOGY

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:CSIR INSTITUTE OF MICROBIAL TECHNOLOGY

characteristic: collection date

text: Virome extracted from a surface sediment sample of N-Choe collected Near New Lake (30°43'38.0"N, 76°44'17.0"E), Sector 42D, Chandigarh

text: Freshwater

characteristic: environment (biome)

text: Stream

characteristic: environment (feature)

text: Sediment

characteristic: environment (material)

text: India

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: viral metagenome

characteristic: organism

text: Exploration of Environmental Virome and Functional metagenomics

characteristic: project name

text: viral metagenome

text: sediment

characteristic: sediment environmental package

text: Nanopore

characteristic: sequencing method

text: Deciphering the DNA virome from sediments of N-Choe stream, Chandigarh, India

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CSIR INSTITUTE OF MICROBIAL TECHNOLOGY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Virome extracted from a surface sediment sample of N-Choe collected Near Shantikunj Park (30°44'38.8"N, 76°46'34.2"E), Sector 16C, Chandigarh

characteristic: description

text: Freshwater

text: Stream

text: Sediment

text: India

text: metagenome

text: viral metagenome

text: viral metagenome

text: sediment

text: Nanopore


text: public

characteristic: INSDC status

tag: Namespace:Klinikum rechts der Isar, II. Medizinische Klinik

text: house mouse

characteristic: common name

text: Sorted murine Il24 +/+ Th17 cells after 3 days of culture (replicate 1/5) (Barcode ATAAAC)

text: Mus musculus

text: Mus musculus

text: RNASample


text: Klinikum rechts der Isar, II. Medizinische Klinik

text: public

text: house mouse

text: Sorted murine Il24 –/– Th17 cells after 3 days of culture (replicate 1/5) (Barcode ATACAA)

text: Mus musculus

characteristic: organism

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: Sorted murine Il24 +/+ Th17 cells after 3 days of culture (replicate 5/5) (Barcode CACGGC)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: Sorted murine Il24 –/– Th17 cells after 3 days of culture (replicate 5/5) (Barcode CAGGGG)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: Sorted murine Il24 +/+ Th17 cells after 3 days of culture (replicate 4/5) (Barcode CCACAT)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: Sorted murine Il24 –/– Th17 cells after 3 days of culture (replicate 4/5) (Barcode CTAGTG)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: Sorted murine Il24 +/+ Th17 cells after 3 days of culture (replicate 2/5) (Barcode GATAAT)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: Sorted murine Il24 –/– Th17 cells after 3 days of culture (replicate 2/5) (Barcode GTAATA)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: Sorted murine Il24 +/+ Th17 cells after 3 days of culture (replicate 3/5) (Barcode TCTTAA)

text: Mus musculus

text: Mus musculus

text: RNASample


text: public

text: house mouse

text: Sorted murine Il24 –/– Th17 cells after 3 days of culture (replicate 3/5) (Barcode TGATTT)

text: Mus musculus

text: Mus musculus

text: RNASample


text: UNIVERSITY OF TORONTO

text: public

tag: Namespace:UNIVERSITY OF TORONTO

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein ELAVL1 on an HTR-SELEX process. This sample corresponds to selection Cycle1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein ELAVL1 on an HTR-SELEX process. This sample corresponds to selection Cycle2

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein ELAVL1 on an HTR-SELEX process. This sample corresponds to selection Cycle3

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein ELAVL1 on an HTR-SELEX process. This sample corresponds to selection Cycle4

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein HNRNPA1 on an HTR-SELEX process. This sample corresponds to selection Cycle1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein HNRNPA1 on an HTR-SELEX process. This sample corresponds to selection Cycle2

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein HNRNPA1 on an HTR-SELEX process. This sample corresponds to selection Cycle3

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein HNRNPA1 on an HTR-SELEX process. This sample corresponds to selection Cycle4

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein HNRNPC on an HTR-SELEX process. This sample corresponds to selection Cycle1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein HNRNPC on an HTR-SELEX process. This sample corresponds to selection Cycle2

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein HNRNPC on an HTR-SELEX process. This sample corresponds to selection Cycle3

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein HNRNPC on an HTR-SELEX process. This sample corresponds to selection Cycle4

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein HNRNPL on an HTR-SELEX process. This sample corresponds to selection Cycle1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein HNRNPL on an HTR-SELEX process. This sample corresponds to selection Cycle2

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein HNRNPL on an HTR-SELEX process. This sample corresponds to selection Cycle3

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein HNRNPL on an HTR-SELEX process. This sample corresponds to selection Cycle4

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein HNRNPLL on an HTR-SELEX process. This sample corresponds to selection Cycle1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein HNRNPLL on an HTR-SELEX process. This sample corresponds to selection Cycle2

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein HNRNPLL on an HTR-SELEX process. This sample corresponds to selection Cycle3

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein HNRNPLL on an HTR-SELEX process. This sample corresponds to selection Cycle4

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein LARP6 on an HTR-SELEX process. This sample corresponds to selection Cycle1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein LARP6 on an HTR-SELEX process. This sample corresponds to selection Cycle2

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein LARP6 on an HTR-SELEX process. This sample corresponds to selection Cycle3

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein LARP6 on an HTR-SELEX process. This sample corresponds to selection Cycle4

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein LIN28A on an HTR-SELEX process. This sample corresponds to selection Cycle1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein LIN28A on an HTR-SELEX process. This sample corresponds to selection Cycle2

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein LIN28A on an HTR-SELEX process. This sample corresponds to selection Cycle3

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein LIN28A on an HTR-SELEX process. This sample corresponds to selection Cycle4

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein MBNL1 on an HTR-SELEX process. This sample corresponds to selection Cycle1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein MBNL1 on an HTR-SELEX process. This sample corresponds to selection Cycle2

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein MBNL1 on an HTR-SELEX process. This sample corresponds to selection Cycle3

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein MBNL1 on an HTR-SELEX process. This sample corresponds to selection Cycle4

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein MSI2 on an HTR-SELEX process. This sample corresponds to selection Cycle1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein MSI2 on an HTR-SELEX process. This sample corresponds to selection Cycle2

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein MSI2 on an HTR-SELEX process. This sample corresponds to selection Cycle3

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein MSI2 on an HTR-SELEX process. This sample corresponds to selection Cycle4

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein NOVA1 on an HTR-SELEX process. This sample corresponds to selection Cycle1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein NOVA1 on an HTR-SELEX process. This sample corresponds to selection Cycle2

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein NOVA1 on an HTR-SELEX process. This sample corresponds to selection Cycle3

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein NOVA1 on an HTR-SELEX process. This sample corresponds to selection Cycle4

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein PCBP1 on an HTR-SELEX process. This sample corresponds to selection Cycle1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein PCBP1 on an HTR-SELEX process. This sample corresponds to selection Cycle2

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein PCBP1 on an HTR-SELEX process. This sample corresponds to selection Cycle3

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein PCBP1 on an HTR-SELEX process. This sample corresponds to selection Cycle4

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein Ptbp3 on an HTR-SELEX process. This sample corresponds to selection Cycle1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein Ptbp3 on an HTR-SELEX process. This sample corresponds to selection Cycle2

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein Ptbp3 on an HTR-SELEX process. This sample corresponds to selection Cycle3

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein Ptbp3 on an HTR-SELEX process. This sample corresponds to selection Cycle4

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein PUM2 on an HTR-SELEX process. This sample corresponds to selection Cycle1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein PUM2 on an HTR-SELEX process. This sample corresponds to selection Cycle2

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein PUM2 on an HTR-SELEX process. This sample corresponds to selection Cycle3

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein PUM2 on an HTR-SELEX process. This sample corresponds to selection Cycle4

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein QKI on an HTR-SELEX process. This sample corresponds to selection Cycle1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein QKI on an HTR-SELEX process. This sample corresponds to selection Cycle2

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein QKI on an HTR-SELEX process. This sample corresponds to selection Cycle3

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein QKI on an HTR-SELEX process. This sample corresponds to selection Cycle4

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein RBFOX1 on an HTR-SELEX process. This sample corresponds to selection Cycle1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein RBFOX1 on an HTR-SELEX process. This sample corresponds to selection Cycle2

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein RBFOX1 on an HTR-SELEX process. This sample corresponds to selection Cycle3

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein RBFOX1 on an HTR-SELEX process. This sample corresponds to selection Cycle4

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein RBMY1A1 on an HTR-SELEX process. This sample corresponds to selection Cycle1

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein RBMY1A1 on an HTR-SELEX process. This sample corresponds to selection Cycle2

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein RBMY1A1 on an HTR-SELEX process. This sample corresponds to selection Cycle3

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein RBMY1A1 on an HTR-SELEX process. This sample corresponds to selection Cycle4

text: synthetic construct

text: synthetic construct


text: UNIVERSITY OF TORONTO

text: public

text: randomised nucleotide library that has been selected for binding sites of RNA binding protein RC3H1 on an HTR-SELEX process. This sample corresponds to selection Cycle1

text: synthetic construct

text: synthetic construct