characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542172,ERS4542173,ERS4542174,ERS4542175,ERS4542176,ERS4542177,ERS4542178,ERS4542179,ERS4542180,ERS4542181

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Bacilli bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Bacilli bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E22__bin81


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542171

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

unit: DD

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Onthovivens merdipullorum

characteristic: organism

text: MetaChick

text: Candidatus Onthovivens merdipullorum

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_SB__bin8

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542272

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Bacilli bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Bacilli bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_D__bin87


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542079

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Bacilli bacterium

characteristic: organism

text: MetaChick

text: uncultured Bacilli bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_EE__bin10

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Bacilli bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Bacilli bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_D__bin78


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Bacilli bacterium

characteristic: organism

text: MetaChick

text: uncultured Bacilli bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_D__bin114

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542122,ERS4542123,ERS4542124,ERS4542125,ERS4542126,ERS4542127,ERS4542128,ERS4542129,ERS4542130,ERS4542131

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Bacilli bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Bacilli bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E17__bin75


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542152,ERS4542153,ERS4542154,ERS4542155,ERS4542156,ERS4542157,ERS4542158,ERS4542159,ERS4542160,ERS4542161

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Bacilli bacterium

characteristic: organism

text: MetaChick

text: uncultured Bacilli bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: E20__bin183

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542192,ERS4542193,ERS4542194,ERS4542195,ERS4542196,ERS4542197,ERS4542198,ERS4542199,ERS4542200,ERS4542201

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Bacilli bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Bacilli bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E25__bin44


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Bacilli bacterium

characteristic: organism

text: MetaChick

text: uncultured Bacilli bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_SB__bin44

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542202,ERS4542203,ERS4542204,ERS4542205,ERS4542206,ERS4542207,ERS4542208,ERS4542209,ERS4542210,ERS4542211

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Bacilli bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Bacilli bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E27__bin352


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542319

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_DF__bin54

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542322,ERS4542323,ERS4542324,ERS4542325,ERS4542326,ERS4542327,ERS4542328,ERS4542329,ERS4542330,ERS4542331

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E09__bin159


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542092

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_BM__bin111

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542318

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_CN__bin63


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542249

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_DA__bin78

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542300

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_DR__bin56


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542059

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_EA__bin93

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542282

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_E__bin165


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542090

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_GA__bin43

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542047

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_HK__bin48


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542049

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_HT__bin55

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542207

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_KL__bin53


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542254

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_LV__bin30

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542011

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_NT__bin43


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542103

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_PA__bin62

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542213

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_P__bin41


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542142,ERS4542143,ERS4542144,ERS4542145,ERS4542146,ERS4542147,ERS4542148,ERS4542149,ERS4542150,ERS4542151

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: E01__bin319

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542292,ERS4542293,ERS4542294,ERS4542295,ERS4542296,ERS4542297,ERS4542298,ERS4542299,ERS4542300,ERS4542301

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E06__bin182


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542312,ERS4542313,ERS4542314,ERS4542315,ERS4542316,ERS4542317,ERS4542318,ERS4542319,ERS4542320,ERS4542321

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: E08__bin333

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542322,ERS4542323,ERS4542324,ERS4542325,ERS4542326,ERS4542327,ERS4542328,ERS4542329,ERS4542330,ERS4542331

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E09__bin175


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542172,ERS4542173,ERS4542174,ERS4542175,ERS4542176,ERS4542177,ERS4542178,ERS4542179,ERS4542180,ERS4542181

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: E22__bin227

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542202,ERS4542203,ERS4542204,ERS4542205,ERS4542206,ERS4542207,ERS4542208,ERS4542209,ERS4542210,ERS4542211

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E27__bin72


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542254

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Borkfalkia avicola

characteristic: organism

text: MetaChick

text: Candidatus Borkfalkia avicola

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_LV__bin64

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542091

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Borkfalkia avistercoris

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: Candidatus Borkfalkia avistercoris

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_FH__bin53


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542102,ERS4542103,ERS4542104,ERS4542105,ERS4542106,ERS4542107,ERS4542108,ERS4542109,ERS4542110,ERS4542111

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Borkfalkia excrementavium

characteristic: organism

text: MetaChick

text: Candidatus Borkfalkia excrementavium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: E15__bin170

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542082

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Borkfalkia excrementipullorum

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_BL__bin48


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542097

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Borkfalkia faecavium

characteristic: organism

text: MetaChick

text: Candidatus Borkfalkia faecavium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_GB__bin7

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542010

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Borkfalkia faecigallinarum

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: Candidatus Borkfalkia faecigallinarum

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_NS__bin41


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542088

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Borkfalkia faecipullorum

characteristic: organism

text: MetaChick

text: Candidatus Borkfalkia faecipullorum

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_ES__bin61

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542312,ERS4542313,ERS4542314,ERS4542315,ERS4542316,ERS4542317,ERS4542318,ERS4542319,ERS4542320,ERS4542321

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E08__bin143


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542104

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_PB__bin70

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542295

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_FC__bin60


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542099

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_EV__bin35

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542095

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_DK__bin7


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542039

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_HS__bin57

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542242,ERS4542243,ERS4542244,ERS4542245,ERS4542246,ERS4542247,ERS4542248,ERS4542249,ERS4542250,ERS4542251

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Borkfalkia stercoripullorum

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: Candidatus Borkfalkia stercoripullorum

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E03__bin193


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542142

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_A__bin90

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542296

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_BD__bin68


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542306

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_BE__bin69

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542297

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_BT__bin29


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542308

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_CM__bin58

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542059

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_EA__bin65


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542096

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_FK__bin22

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542292

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_F__bin37


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542325

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_GG__bin100

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_GG__bin81


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542204

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_KH__bin127

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542223

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_KS__bin127


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542072

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_M__bin73

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542212,ERS4542213,ERS4542214,ERS4542215,ERS4542216,ERS4542217,ERS4542218,ERS4542219,ERS4542220,ERS4542221

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E02__bin201


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542272,ERS4542273,ERS4542274,ERS4542275,ERS4542276,ERS4542277,ERS4542278,ERS4542279,ERS4542280,ERS4542281

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: E04__bin285

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542322,ERS4542323,ERS4542324,ERS4542325,ERS4542326,ERS4542327,ERS4542328,ERS4542329,ERS4542330,ERS4542331

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E09__bin280


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542152,ERS4542153,ERS4542154,ERS4542155,ERS4542156,ERS4542157,ERS4542158,ERS4542159,ERS4542160,ERS4542161

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: E20__bin344

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542105

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Coproplasma avicola

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: Candidatus Coproplasma avicola

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_PC__bin17


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542036

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Coproplasma avistercoris

characteristic: organism

text: MetaChick

text: Candidatus Coproplasma avistercoris

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_HE__bin50

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542041

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Coproplasma excrementavium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: Candidatus Coproplasma excrementavium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_IF__bin57


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542022,ERS4542023,ERS4542024,ERS4542025,ERS4542026,ERS4542027,ERS4542028,ERS4542029,ERS4542030,ERS4542031

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Coproplasma excrementigallinarum

characteristic: organism

text: MetaChick

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: E0_LS__bin72

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542083

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Coproplasma excrementipullorum

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_CD__bin18


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542106

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_PD__bin51

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Coproplasma stercoravium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: Candidatus Coproplasma stercoravium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_CD__bin23


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542143

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Coproplasma stercorigallinarum

characteristic: organism

text: MetaChick

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_N__bin40

characteristic: title