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characteristic: INSDC center name

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text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

text: Human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

text: Human

characteristic: host common name

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-6761/2020

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

text: Human

text: n_infections=2,last_infection_date=2020-11-02

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Sjaelland

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Molekylær Medicinsk Afdeling, Aarhus University Hospital, Aarhus, Denmark

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Sjaelland

text: Human

text: n_infections=2,last_infection_date=2020-12-28

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2


text: Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Sjaelland

characteristic: geographic location (region and locality)

text: Human

text: n_infections=2,last_infection_date=2020-03-30

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

text: active surveillance in response to outbreak


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-385931/2022

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Department of Clinical Microbiology, Odense University Hospital, Odense, Denmark

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Syddanmark

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Nordjylland

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

text: Human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Midtjylland

characteristic: geographic location (region and locality)

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-232613/2021

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-68393/2021

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

characteristic: geographic location (region and locality)

text: Human

text: n_infections=2,last_infection_date=2021-11-29

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Nordjylland

text: Human

characteristic: host common name

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-398093/2022

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

text: n_infections=2,last_infection_date=2020-12-14

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Midtjylland

characteristic: geographic location (region and locality)

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-436581/2022

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2021-04-19

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Sjaelland

text: Human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Nordjylland

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-02-07

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-29858/2020

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Midtjylland

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2020-12-28

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Molekylær Medicinsk Afdeling, Aarhus University Hospital, Aarhus, Denmark

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

text: public

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Nordjylland

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Nordjylland

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2021-01-11

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

text: Human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Department of Clinical Microbiology, Odense University Hospital, Odense, Denmark

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Syddanmark

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

text: Human

text: n_infections=2,last_infection_date=2022-01-10

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

characteristic: geographic location (region and locality)

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-31777/2021

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

text: n_infections=2,last_infection_date=2020-11-30

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Midtjylland

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Sjaelland

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-220219/2021

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Sjaelland

characteristic: geographic location (region and locality)

text: Human

text: n_infections=2,last_infection_date=2022-01-31

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Nordjylland

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2021-08-09

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Syddanmark

characteristic: geographic location (region and locality)

text: Human

text: n_infections=2,last_infection_date=2022-01-03

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

tag: Namespace:West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

text: COVID-19 Genomics UK Consortium

characteristic: broker name

text: not provided

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: Scotland

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

characteristic: title

text: not provided

characteristic: virus identifier


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Midtjylland

text: Human

text: n_infections=2,last_infection_date=2022-02-14

characteristic: host description

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Nordjylland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Midtjylland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Syddanmark

text: Human

characteristic: host description

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Nordjylland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Hovedstaden

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-253989/2021

characteristic: host description

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Syddanmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2020-12-28

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Syddanmark

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Syddanmark

text: Human

characteristic: host description

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Syddanmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-29887/2020

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Sjaelland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

text: Severe acute respiratory syndrome coronavirus 2

characteristic: title


text: Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Midtjylland

text: Human

text: n_infections=2,last_infection_date=2021-12-20

characteristic: host description

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2020-04-06

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Midtjylland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Midtjylland

text: Human

text: n_infections=3,last_infection_date=2022-04-25

characteristic: host description

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Sjaelland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2021-11-15

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Nordjylland

text: Human

characteristic: host description

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-02-07

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Nordjylland

text: Human

text: n_infections=2,last_infection_date=2022-01-10

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Hovedstaden

text: Human

characteristic: host description

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Syddanmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Nordjylland

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-9282/2020

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Hovedstaden

text: Human

text: n_infections=2,last_infection_date=2020-12-07

characteristic: host description

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Syddanmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2020-10-19

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Nordjylland

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-58789/2021

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Department of Clinical Microbiology, Odense University Hospital, Odense, Denmark

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Syddanmark

text: Human

characteristic: host description

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Sjaelland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Midtjylland

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-13102/2020

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Midtjylland

text: Human

text: n_infections=2,last_infection_date=2020-12-14

characteristic: host description

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Midtjylland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: sample capture status


text: Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Hovedstaden

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Midtjylland

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-30449/2020

characteristic: host description

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Nordjylland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metawrap v1.3.0

characteristic: binning software

text: EBI-EMG

characteristic: broker name

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR11267042 of study SRP252002.

characteristic: description

text: honeybee

characteristic: environment (biome)

text: digestive system

characteristic: environment (feature)

text: gut content

characteristic: environment (material)

text: China

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: honeybee metagenome

characteristic: isolation source

text: honeybee metagenome

characteristic: metagenomic source

text: uncultured Lactobacillus sp.

text: metagenomic sequencing of Apis cerana and Apis mellifera colonies in China

characteristic: project name

characteristic: sample derived from

text: uncultured Lactobacillus sp.

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR11267042_bin.10_metawrap_v1.3.0_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metawrap v1.3.0

characteristic: binning software

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

text: CheckM

text: honeybee

text: digestive system

text: gut content

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: honeybee metagenome

text: honeybee metagenome

text: uncultured Lactobacillus sp.

characteristic: organism

text: uncultured Lactobacillus sp.

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR11267042_bin.12_metawrap_v1.3.0_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metawrap v1.3.0

text: EBI-EMG

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: honeybee

characteristic: environment (biome)

text: digestive system

characteristic: environment (feature)

text: gut content

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: honeybee metagenome

characteristic: isolation source

text: honeybee metagenome

characteristic: metagenomic source

text: Bartonella apis

characteristic: project name

characteristic: sample derived from

text: Bartonella apis

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR11267042_bin.13_metawrap_v1.3.0_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metawrap v1.3.0

characteristic: binning software

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

text: CheckM

text: honeybee

text: digestive system

text: gut content

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: honeybee metagenome

text: honeybee metagenome

text: uncultured Gilliamella sp.

characteristic: organism

text: uncultured Gilliamella sp.

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR11267042_bin.19_metawrap_v1.3.0_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metawrap v1.3.0

text: EBI-EMG

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: honeybee

characteristic: environment (biome)

text: digestive system

characteristic: environment (feature)

text: gut content

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: honeybee metagenome

characteristic: isolation source

text: honeybee metagenome

characteristic: metagenomic source

text: Gilliamella apicola

characteristic: project name

characteristic: sample derived from

text: Gilliamella apicola

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR11267042_bin.4_metawrap_v1.3.0_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metawrap v1.3.0

characteristic: binning software

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

text: CheckM

text: honeybee

text: digestive system

text: gut content

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: honeybee metagenome

text: honeybee metagenome

text: Klebsiella oxytoca

characteristic: organism

text: Klebsiella oxytoca

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR11267042_bin.8_metawrap_v1.3.0_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metawrap v1.3.0

text: EBI-EMG

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR11267043 of study SRP252002.

characteristic: description

text: honeybee

characteristic: environment (biome)

text: digestive system

characteristic: environment (feature)

text: gut content

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: honeybee metagenome

characteristic: isolation source

text: honeybee metagenome

characteristic: metagenomic source

text: uncultured Bartonella sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Bartonella sp.

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR11267043_bin.10_metawrap_v1.3.0_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metawrap v1.3.0

characteristic: binning software

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

text: CheckM

text: honeybee

text: digestive system

text: gut content

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: honeybee metagenome

text: honeybee metagenome

text: uncultured Neisseriaceae bacterium

characteristic: organism

text: uncultured Neisseriaceae bacterium

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR11267043_bin.6_metawrap_v1.3.0_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metawrap v1.3.0

text: EBI-EMG

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR11267044 of study SRP252002.

characteristic: description

text: honeybee

characteristic: environment (biome)

text: digestive system

characteristic: environment (feature)

text: gut content

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: honeybee metagenome

characteristic: isolation source

text: honeybee metagenome

characteristic: metagenomic source

text: uncultured Commensalibacter sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Commensalibacter sp.

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR11267044_bin.11_metawrap_v1.3.0_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metawrap v1.3.0

characteristic: binning software

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR11267045 of study SRP252002.

text: honeybee

text: digestive system

text: gut content

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: honeybee metagenome

text: honeybee metagenome

text: uncultured Gilliamella sp.

characteristic: organism

text: uncultured Gilliamella sp.

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR11267045_bin.10_metawrap_v1.3.0_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes v3.15.3

text: metawrap v1.3.0

text: EBI-EMG

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: honeybee

characteristic: environment (biome)

text: digestive system

characteristic: environment (feature)

text: gut content

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: honeybee metagenome

characteristic: isolation source

text: honeybee metagenome

characteristic: metagenomic source

text: uncultured Lactobacillus sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Lactobacillus sp.

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR11267045_bin.5_metawrap_v1.3.0_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metawrap v1.3.0

characteristic: binning software

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR11267046 of study SRP252002.

text: honeybee

text: digestive system

text: gut content

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: honeybee metagenome

text: honeybee metagenome

text: uncultured Lactobacillus sp.

characteristic: organism

text: uncultured Lactobacillus sp.

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR11267046_bin.10_metawrap_v1.3.0_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metawrap v1.3.0

text: EBI-EMG

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: honeybee

characteristic: environment (biome)

text: digestive system

characteristic: environment (feature)

text: gut content

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: honeybee metagenome

characteristic: isolation source

text: honeybee metagenome

characteristic: metagenomic source

text: Klebsiella pneumoniae

text: metagenomic sequencing of Apis cerana and Apis mellifera colonies in China

characteristic: project name

characteristic: sample derived from

text: Klebsiella pneumoniae

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR11267046_bin.13_metawrap_v1.3.0_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metawrap v1.3.0

characteristic: binning software

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

text: CheckM

text: honeybee

text: digestive system

text: gut content

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: honeybee metagenome

text: honeybee metagenome

text: uncultured Dolosicoccus sp.

characteristic: organism

text: uncultured Dolosicoccus sp.

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR11267046_bin.5_metawrap_v1.3.0_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metawrap v1.3.0

text: EBI-EMG

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: honeybee

characteristic: environment (biome)

text: digestive system

characteristic: environment (feature)

text: gut content

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: honeybee metagenome

characteristic: isolation source

text: honeybee metagenome

characteristic: metagenomic source

text: uncultured Lactobacillus sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Lactobacillus sp.

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR11267046_bin.9_metawrap_v1.3.0_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metawrap v1.3.0

characteristic: binning software

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: common name

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR11267050 of study SRP252002.

text: honeybee

text: digestive system

text: gut content

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: honeybee metagenome

text: honeybee metagenome

text: uncultured Commensalibacter sp.

characteristic: organism

text: uncultured Commensalibacter sp.

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR11267050_bin.4_metawrap_v1.3.0_MAG

characteristic: title