characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Oscillospiraceae bacterium

characteristic: organism

text: MetaChick

text: ERS4542222,ERS4542223,ERS4542224,ERS4542225,ERS4542226,ERS4542227,ERS4542228,ERS4542229,ERS4542230,ERS4542231

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: E30__bin50

characteristic: title


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542232,ERS4542233,ERS4542234,ERS4542235,ERS4542236,ERS4542237,ERS4542238,ERS4542239,ERS4542240,ERS4542241

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Oscillospiraceae bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E37__bin86


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Oscillospiraceae bacterium

characteristic: organism

text: MetaChick

text: ERS4542232,ERS4542233,ERS4542234,ERS4542235,ERS4542236,ERS4542237,ERS4542238,ERS4542239,ERS4542240,ERS4542241

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: E37__bin91

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542263,ERS4542264,ERS4542265,ERS4542266,ERS4542267,ERS4542268,ERS4542269,ERS4542270,ERS4542271,ERS4542262

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Scatomorpha gallistercoris

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: Candidatus Scatomorpha gallistercoris

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E41__bin114


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542089

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Scatomorpha intestinavium

characteristic: organism

text: MetaChick

text: Candidatus Scatomorpha intestinavium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_FI__bin86

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Scatomorpha intestinigallinarum

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_FI__bin48


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542263

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Scatomorpha merdavium

characteristic: organism

text: MetaChick

text: Candidatus Scatomorpha merdavium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_MH__bin34

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542050

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Scatomorpha merdigallinarum

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: Candidatus Scatomorpha merdigallinarum

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_IC__bin17


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542258

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Scatomorpha merdipullorum

characteristic: organism

text: MetaChick

text: Candidatus Scatomorpha merdipullorum

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_MD__bin78

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542145

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Scatomorpha pullicola

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: Candidatus Scatomorpha pullicola

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_GC__bin60


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Scatomorpha pullistercoris

characteristic: organism

text: MetaChick

text: Candidatus Scatomorpha pullistercoris

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_MD__bin34

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542054

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Oscillospiraceae bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_EN__bin2


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542011

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Oscillospiraceae bacterium

characteristic: organism

text: MetaChick

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_NT__bin75

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542149

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Oscillospiraceae bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_CT__bin13


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542309

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Scatomorpha stercoravium

characteristic: organism

text: MetaChick

text: Candidatus Scatomorpha stercoravium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_DE__bin67

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542103

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Scatomorpha stercorigallinarum

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_PA__bin102


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542212,ERS4542213,ERS4542214,ERS4542215,ERS4542216,ERS4542217,ERS4542218,ERS4542219,ERS4542220,ERS4542221

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Oscillospiraceae bacterium

characteristic: organism

text: MetaChick

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: E02__bin5

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542312,ERS4542313,ERS4542314,ERS4542315,ERS4542316,ERS4542317,ERS4542318,ERS4542319,ERS4542320,ERS4542321

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E08__bin50


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542315

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_FD__bin98

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542211

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_KQ__bin77


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542092

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_BM__bin65

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542142,ERS4542143,ERS4542144,ERS4542145,ERS4542146,ERS4542147,ERS4542148,ERS4542149,ERS4542150,ERS4542151

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E01__bin348


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: ERS4542142,ERS4542143,ERS4542144,ERS4542145,ERS4542146,ERS4542147,ERS4542148,ERS4542149,ERS4542150,ERS4542151

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: E01__bin353

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542242,ERS4542243,ERS4542244,ERS4542245,ERS4542246,ERS4542247,ERS4542248,ERS4542249,ERS4542250,ERS4542251

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E03__bin237


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542272,ERS4542273,ERS4542274,ERS4542275,ERS4542276,ERS4542277,ERS4542278,ERS4542279,ERS4542280,ERS4542281

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: E04__bin20

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542322,ERS4542323,ERS4542324,ERS4542325,ERS4542326,ERS4542327,ERS4542328,ERS4542329,ERS4542330,ERS4542331

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E09__bin247


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4541992,ERS4541993,ERS4541994,ERS4541995,ERS4541996,ERS4541997,ERS4541998,ERS4541999,ERS4542000,ERS4542001

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: E0_DM__bin74

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542082,ERS4542083,ERS4542084,ERS4542085,ERS4542086,ERS4542087,ERS4542088,ERS4542089,ERS4542090,ERS4542091

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E13__bin195


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542059

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Anaerofilum sp.

characteristic: organism

text: MetaChick

text: uncultured Anaerofilum sp.

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_EA__bin79

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542282,ERS4542283,ERS4542284,ERS4542285,ERS4542286,ERS4542287,ERS4542288,ERS4542289,ERS4542290,ERS4542291

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Anaerofilum sp.

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Anaerofilum sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E05__bin356


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542087

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Anaerofilum excrementigallinarum

characteristic: organism

text: MetaChick

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_EF__bin48

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542111

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Anaerofilum faecale

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: Candidatus Anaerofilum faecale

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_PI__bin80


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542242,ERS4542243,ERS4542244,ERS4542245,ERS4542246,ERS4542247,ERS4542248,ERS4542249,ERS4542250,ERS4542251

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Anaerotruncus sp.

characteristic: organism

text: MetaChick

text: uncultured Anaerotruncus sp.

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: E03__bin27

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542092,ERS4542093,ERS4542094,ERS4542095,ERS4542096,ERS4542097,ERS4542098,ERS4542099,ERS4542100,ERS4542101

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Anaerotruncus sp.

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Anaerotruncus sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E14__bin8


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542084

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Anaerotruncus colihominis

characteristic: organism

text: MetaChick

text: Anaerotruncus colihominis

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_CR__bin63

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Anaerotruncus excrementipullorum

text: MetaChick

characteristic: project name

text: ERS4542082,ERS4542083,ERS4542084,ERS4542085,ERS4542086,ERS4542087,ERS4542088,ERS4542089,ERS4542090,ERS4542091

characteristic: sample derived from

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E13__bin214


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542088

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Angelakisella massiliensis

characteristic: organism

text: MetaChick

text: Angelakisella massiliensis

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_ES__bin20

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Aristotella avistercoris

text: MetaChick

characteristic: project name

text: ERS4542092,ERS4542093,ERS4542094,ERS4542095,ERS4542096,ERS4542097,ERS4542098,ERS4542099,ERS4542100,ERS4542101

characteristic: sample derived from

text: Candidatus Aristotella avistercoris

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E14__bin338


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542090

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Avimicrobium caecorum

characteristic: organism

text: MetaChick

text: Candidatus Avimicrobium caecorum

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_GA__bin40

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542021

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Avimicrobium faecavium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: Candidatus Avimicrobium faecavium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_II__bin57


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542106

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_PD__bin76

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542099

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Egerieicola faecale

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: Candidatus Egerieicola faecale

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_EV__bin45


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542048

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Egerieicola pullicola

characteristic: organism

text: MetaChick

text: Candidatus Egerieicola pullicola

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_HP__bin81

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542041

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Faecalibacterium sp.

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Faecalibacterium sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_IF__bin39


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542007

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Faecalibacterium sp.

characteristic: organism

text: MetaChick

text: uncultured Faecalibacterium sp.

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_NP__bin3

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542322,ERS4542323,ERS4542324,ERS4542325,ERS4542326,ERS4542327,ERS4542328,ERS4542329,ERS4542330,ERS4542331

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Faecalibacterium sp.

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Faecalibacterium sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E09__bin130


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542132,ERS4542133,ERS4542134,ERS4542135,ERS4542136,ERS4542137,ERS4542138,ERS4542139,ERS4542140,ERS4542141

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Faecalibacterium sp.

characteristic: organism

text: MetaChick

text: uncultured Faecalibacterium sp.

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: E19__bin70

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4541996

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Faecalibacterium avium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: Candidatus Faecalibacterium avium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_NC__bin56


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542012

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Faecalibacterium faecigallinarum

characteristic: organism

text: MetaChick

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_GH__bin31

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Faecalibacterium faecipullorum

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_NC__bin14


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542108

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Faecalibacterium gallistercoris

characteristic: organism

text: MetaChick

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_PF__bin41

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4541998

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Faecalibacterium intestinavium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_NE__bin5


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542011

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Faecalibacterium intestinigallinarum

characteristic: organism

text: MetaChick

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_NT__bin49

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542101

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Faecalibacterium gallinarum

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: Faecalibacterium gallinarum

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_CS__bin24


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542058

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Faecalibacterium sp.

characteristic: organism

text: MetaChick

text: uncultured Faecalibacterium sp.

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_DH__bin53

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542003

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Faecalibacterium sp.

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Faecalibacterium sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_NK__bin63


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542094

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Faeciplasma avium

characteristic: organism

text: MetaChick

text: Candidatus Faeciplasma avium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_ET__bin23

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542098

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Faeciplasma gallinarum

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: Candidatus Faeciplasma gallinarum

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_EH__bin41


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542090

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Faeciplasma pullistercoris

characteristic: organism

text: MetaChick

text: Candidatus Faeciplasma pullistercoris

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_GA__bin103

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542099

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_EV__bin61


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542025

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_GV__bin68

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542322,ERS4542323,ERS4542324,ERS4542325,ERS4542326,ERS4542327,ERS4542328,ERS4542329,ERS4542330,ERS4542331

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E09__bin225


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542112,ERS4542113,ERS4542114,ERS4542115,ERS4542116,ERS4542117,ERS4542118,ERS4542119,ERS4542120,ERS4542121

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MetaChick

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: E16__bin117

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542232,ERS4542233,ERS4542234,ERS4542235,ERS4542236,ERS4542237,ERS4542238,ERS4542239,ERS4542240,ERS4542241

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E37__bin103


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542043

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Faecivivens stercoravium

characteristic: organism

text: MetaChick

text: Candidatus Faecivivens stercoravium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_GP__bin8

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542297

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Faecivivens stercorigallinarum

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: BRZ_BT__bin64


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542090

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Faecivivens stercoripullorum

characteristic: organism

text: MetaChick

text: Candidatus Faecivivens stercoripullorum

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_GA__bin117

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542082,ERS4542083,ERS4542084,ERS4542085,ERS4542086,ERS4542087,ERS4542088,ERS4542089,ERS4542090,ERS4542091

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: Candidatus Falkowella caecavicola

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: Candidatus Falkowella caecavicola

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E13__bin37


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542084

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: Candidatus Fimivivens faecavium

characteristic: organism

text: MetaChick

text: Candidatus Fimivivens faecavium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_CR__bin55

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542272,ERS4542273,ERS4542274,ERS4542275,ERS4542276,ERS4542277,ERS4542278,ERS4542279,ERS4542280,ERS4542281

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E04__bin30


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT default parameters

characteristic: binning parameters

text: MetaBAT v2.12.1

characteristic: binning software

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4542237

characteristic: description

text: host-associated habitat

text: host-associated habitat

text: caecal content

text: France

text: Jouy-en-Josas

text: metagenome-assembled genome

text: chicken caecal content

text: chicken gut metagenome

text: uncultured Fournierella sp.

characteristic: organism

text: MetaChick

text: uncultured Fournierella sp.

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: BRZ_LM__bin3

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT default parameters

text: MetaBAT v2.12.1

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample(s) ERS4541992,ERS4541993,ERS4541994,ERS4541995,ERS4541996,ERS4541997,ERS4541998,ERS4541999,ERS4542000,ERS4542001

text: host-associated habitat

characteristic: environment (biome)

text: host-associated habitat

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Jouy-en-Josas

characteristic: geographic location (region and locality)

text: metagenome-assembled genome

characteristic: investigation type

text: chicken caecal content

characteristic: isolation source

text: chicken gut metagenome

characteristic: metagenomic source

text: uncultured Fournierella sp.

text: MetaChick

characteristic: project name

characteristic: sample derived from

text: uncultured Fournierella sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: E0_DM__bin178