text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

characteristic: collected by

characteristic: description

text: South Africa, North West

characteristic: geographic location

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Irumu

characteristic: strain


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Anthony Smith, NICD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Anthony Smith, NICD

characteristic: Submitter Id

text: EnteroBase

characteristic: broker name

text: EnteroBase

text: A. Smith, National Institute for Communicable Diseases

characteristic: collection date

text: Whole genome sequencing data uploaded by EnteroBase user

text: South Africa, North West

text: Human, Blood culture

characteristic: isolation source

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Enteritidis

characteristic: serovar

characteristic: title


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

characteristic: collected by

characteristic: description

text: South Africa, Western Cape

characteristic: geographic location

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Muenchen

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Western Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Newport


text: Anthony Smith, NICD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: EnteroBase

text: EnteroBase

text: South Africa, KwaZulu-Natal

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis


text: Anthony Smith, NICD

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: EnteroBase

characteristic: broker name

text: EnteroBase

characteristic: collection date

text: South Africa, Gauteng

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Western Cape

text: Human, Stool

characteristic: isolation source

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Enteritidis

characteristic: serovar

characteristic: title


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

characteristic: collected by

characteristic: description

text: South Africa, Western Cape

characteristic: geographic location

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Typhimurium

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Western Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Muenster


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

text: COVID-19 Genomics UK Consortium

characteristic: collecting institution

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Scotland

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collection date

text: not provided

text: not provided

text: United Kingdom

text: Scotland

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

text: not provided

characteristic: title

text: not provided


characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Public Health Authority of the Slovak Republic

text: Science Park of Comenius University of Bratislava

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Monkeypox virus

characteristic: common name

text: Slovakia

characteristic: geographic location (country and/or sea)

unit: years

characteristic: host age

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: unknown

characteristic: host subject id

text: unknown

text: RNA

text: swab from blister

characteristic: isolation source-host associated

text: Monkeypox virus

text: Monkeypox virus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Open Genomes

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

tag: Namespace:Open Genomes

characteristic: Submitter Id

text: human

text: human donor

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: male

characteristic: sex


text: UNIVERSITY OF EXETER

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:UNIVERSITY OF EXETER

text: marine metagenome

characteristic: organism

text: marine metagenome

characteristic: title


text: UNIVERSITY OF EXETER

text: public

text: Serratia liquefaciens

text: Serratia liquefaciens


text: UNIVERSITY OF EXETER

text: public

text: Serratia sp. PL1

text: Serratia sp. PL1


text: UNIVERSITY OF EXETER

text: public

text: Bacillus licheniformis

text: Bacillus licheniformis


text: UNIVERSITY OF EXETER

text: public

text: Serratia sp. PL2

text: Serratia sp. PL2


text: UNIVERSITY OF EXETER

text: public

text: Enterobacter sp. PL1

text: Enterobacter sp. PL1


text: UNIVERSITY OF EXETER

text: public

text: Bacillus sp. PL1

text: Bacillus sp. PL1


text: UNIVERSITY OF EXETER

text: public

text: Enterobacter sp. PL2

text: Enterobacter sp. PL2


text: UNIVERSITY OF EXETER

text: public

text: Serratia sp. PL3

text: Serratia sp. PL3


text: UNIVERSITY OF EXETER

text: public

text: Serratia fonticola

text: Serratia fonticola


text: UNIVERSITY OF EXETER

text: public

text: Enterococcus faecalis

text: Enterococcus faecalis


text: UNIVERSITY OF EXETER

text: public

text: Serratia sp. PL4

text: Serratia sp. PL4


text: UNIVERSITY OF EXETER

text: public

text: Serratia sp. PL5

text: Serratia sp. PL5


text: UNIVERSITY OF EXETER

text: public

text: Serratia sp. PL6

text: Serratia sp. PL6


text: UNIVERSITY OF EXETER

text: public

text: Serratia sp. PL7

text: Serratia sp. PL7


text: UNIVERSITY OF EXETER

text: public

text: Serratia sp. PL8

text: Serratia sp. PL8


text: University of Tartu, Estonia

text: public

text: ena-upload-cli v0.6.0 @ Galaxy

tag: Namespace:University of Tartu, Estonia

text: Nasopharyngeal/oropharyngeal swab from Estonian Covid-19 patient

text: Estonia

characteristic: geographic location (country and/or sea)

text: Northern Estonia

characteristic: geographic location (region and locality)

text: Homo sapiens

characteristic: host scientific name

text: PCR tiled amplicon WGS of SARS-Cov-2, pre-selected subset from active surveillance


characteristic: ENA-CHECKLIST

text: University of Tartu, Estonia

text: public

text: ena-upload-cli v0.6.0 @ Galaxy

text: Estonia

text: Central Estonia

text: Homo sapiens


characteristic: ENA-FIRST-PUBLIC

text: University of Tartu, Estonia

text: public

text: ena-upload-cli v0.6.0 @ Galaxy

text: Estonia

text: North-Eastern Estonia

text: Homo sapiens


characteristic: ENA-LAST-UPDATE

text: University of Tartu, Estonia

text: public

text: ena-upload-cli v0.6.0 @ Galaxy

text: Estonia

text: Southern Estonia

text: Homo sapiens


characteristic: External Id

text: University of Tartu, Estonia

text: public

text: ena-upload-cli v0.6.0 @ Galaxy

text: Estonia

text: Western Estonia

text: Homo sapiens


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

text: public

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

characteristic: collection date

text: Alexander Imhof, Cedric Howald, Lorenzo Cerutti, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

characteristic: collector name

text: Switzerland

text: BE

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-SRO-500011_8413/2022

characteristic: isolate

characteristic: sample capture status

text: active surveillance not initiated by an outbreak


text: SRO

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-500012_0636/2022

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

text: public

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-500011_8674/2022


text: SRO

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-SRO-500011_8926/2022

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

characteristic: Submitter Id

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

characteristic: geographic location (country and/or sea)

text: LU

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/LU-SRO-500011_9790/2022

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-500011_8100/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-SRO-500011_9922/2022

characteristic: isolate

characteristic: sample capture status


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-500011_9760/2022

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

characteristic: collection date

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text: Switzerland

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text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-500011_9092/2022


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

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text: Human

characteristic: host common name

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text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

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text: hCoV-19/Switzerland/LU-SRO-500011_9371/2022

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

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characteristic: ENA-CHECKLIST

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characteristic: External Id

text: SRO

text: public

characteristic: Submitter Id

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-500012_0082/2022

characteristic: organism

text: active surveillance in response to outbreak

characteristic: title


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

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text: public

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characteristic: SRA accession

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

characteristic: collection date

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text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-500011_8196/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

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text: Human

characteristic: host common name

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text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

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text: hCoV-19/Switzerland/BE-SRO-500011_9237/2022

characteristic: isolate

characteristic: sample capture status


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Alexander Imhof, Cedric Howald, Lorenzo Cerutti, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-500011_8116/2022

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

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characteristic: SRA accession

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

text: LU

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/LU-SRO-500012_0356/2022

text: active surveillance not initiated by an outbreak


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

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text: Human

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text: Homo sapiens

text: restricted access

characteristic: host sex

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text: hCoV-19/Switzerland/BE-SRO-500011_9765/2022

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

characteristic: Submitter Id

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-500012_0168/2022

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

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text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-500011_9892/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

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text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/SO-SRO-220706_0071/2022

characteristic: isolate

characteristic: sample capture status


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

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text: public

characteristic: Submitter Id

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-500011_9717/2022

characteristic: organism

characteristic: title


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characteristic: External Id

text: SRO

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characteristic: SRA accession

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text: Switzerland

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text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-500012_0596/2022


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

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text: SIB

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text: Homo sapiens

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characteristic: host sex

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text: hCoV-19/Switzerland/BE-SRO-500012_0066/2022

characteristic: isolate

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characteristic: ENA-CHECKLIST

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text: SRO

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characteristic: Submitter Id

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-500011_8356/2022

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

characteristic: collection date

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text: Switzerland

text: BE

text: Human

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text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-500011_9427/2022

text: Severe acute respiratory syndrome coronavirus 2


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

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characteristic: host common name

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characteristic: host health state

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-SRO-500011_9114/2022

characteristic: isolate

text: active surveillance in response to outbreak

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characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

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text: public

characteristic: Submitter Id

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-500012_0022/2022

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

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characteristic: INSDC status

characteristic: SRA accession

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

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text: Alexander Imhof, Cedric Howald, Lorenzo Cerutti, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

characteristic: collector name

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-500011_9716/2022


characteristic: GISAID Accession ID

text: SRO

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text: public

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text: Spital Langenthal, SRO AG, Labor

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text: NVRL

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

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characteristic: common name

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text: Europe / Ireland / Dublin

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text: Europe / Ireland / Dublin

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text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

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characteristic: geographic location (country and/or sea)

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text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00367727/2022


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00368425/2022

characteristic: title

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text: NVRL

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characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

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text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00368436/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

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text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

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characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00368426/2022

characteristic: title

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text: not provided

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text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

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text: not provided

text: not provided

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text: Homo sapiens

text: male

characteristic: host sex

text: not provided

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text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00367751/2022


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: not applicable

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characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00368394/2022

characteristic: title

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text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

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text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

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text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00367718/2022


characteristic: ENA-CHECKLIST

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text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

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text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

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characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00367738/2022

characteristic: title

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text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

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text: Europe / Ireland / Dublin

text: human

characteristic: host common name

text: not provided

text: not provided

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text: Homo sapiens

text: male

characteristic: host sex

text: not provided

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text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00367716/2022


characteristic: ENA-CHECKLIST

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text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

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text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

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characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00367705/2022

characteristic: title

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text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

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text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

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text: not provided

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text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00367733/2022


characteristic: ENA-CHECKLIST

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text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

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text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: organism

text: active surveillance in response to outbreak

text: hCoV-19/Ireland/D-NVRL-S22IRL00367722/2022

characteristic: title

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text: NVRL

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text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

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text: not provided

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characteristic: host health state

text: Homo sapiens

text: female

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text: not provided

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text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00367697/2022


characteristic: ENA-CHECKLIST

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text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

text: not applicable

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characteristic: isolation source host associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00367737/2022

characteristic: title

characteristic: virus identifier


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text: NVRL

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characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

characteristic: host common name

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00367690/2022