characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Sheep digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

text: CheckM

text: Rumen content

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: sheep gut metagenome

text: Rumen

text: sheep gut metagenome

text: uncultured Treponema sp.

characteristic: organism

text: uncultured Treponema sp.

text: HiSeq X Ten

text: multi-marker approach

text: Metagenome-assembled genome: SRR12081303_bin.97_metaWRAP_v1.3_MAG


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes v3.15.3

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

text: metaWRAP v1.3

text: Sheep digestive system

text: EBI-EMG

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR12081303 of study SRP268616.

characteristic: description

text: Rumen content

characteristic: environmental medium

text: China

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: sheep gut metagenome

text: Rumen

characteristic: local environmental context

text: sheep gut metagenome

characteristic: metagenomic source

text: uncultured Verrucomicrobia bacterium

text: The aim of this study was to investigate how the rumen microbiome and fiber-degrading enzymes of Hu sheep respond to diets containing wheat straw

characteristic: project name

characteristic: sample derived from

text: uncultured Verrucomicrobia bacterium

text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Verrucomicrobia;c__;o__;f__;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12081303_bin.98_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Sheep digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

text: CheckM

text: Rumen content

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: sheep gut metagenome

text: Rumen

text: sheep gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: uncultured Clostridia bacterium

text: HiSeq X Ten

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR12081303_bin.99_metaWRAP_v1.3_MAG


text: Mona Holberg-Petersen, Lise Andresen, Cathrine Fladeby, Mariann Nilsen, Teodora Plamenova Ribarska, Pål Marius Bjørnstad, Gregor D. Gilfillan, Arvind Yegambaram Meenakshi Sundaram, Kathrine Stene-Johansen, Kamilla Heddeland Instefjord, Hilde Elshaug, Garcia Llorente Ignacio, Jon Bråte, Pedersen Benedikte Nevjen, Line Victoria Moen, Rasmus Riis Kopperud, Hilde Vollan, Olav Hungnes, Karoline Bragstad

characteristic: Authors

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: GISAID Accession ID

text: public

tag: Namespace:Norwegian Institute of Public Health (NIPH)

text: ELIXIR-Norway

text: Oslo University Hospital, Department of Microbiology ; P.O.Box 4956 Nydalen, N-0424 Oslo, Norway

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Norway

text: Oslo

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: not provided

characteristic: isolation source host-associated

text: Severe acute respiratory syndrome coronavirus 2

characteristic: title


characteristic: External Id

text: Norwegian Institute of Public Health (NIPH)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

characteristic: collection date

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: Oslo

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism


characteristic: Authors

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: GISAID Accession ID

text: public

text: ELIXIR-Norway

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Norway

text: Viken

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ELIXIR-Norway

text: not provided

text: Norway

text: Vestfold og Telemark

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: not provided

characteristic: isolation source host-associated

characteristic: title


characteristic: Authors

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: GISAID Accession ID

text: public

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: Troms og Finnmark

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism


characteristic: External Id

text: STOCKHOLM UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:STOCKHOLM UNIVERSITY

text: Spain

text: Santa Maria de Trassierra, Córdoba

characteristic: geographic location (region and locality)

text: 37°55'55.1N, 4°52'59.9W

text: Linum tenue

text: Linum tenue

text: leaf


characteristic: ENA-CHECKLIST

text: STOCKHOLM UNIVERSITY

text: public

text: Spain

text: Castillo de Locubín, Jaén

text: 37°33'50.5N, 3°53'22.9W

text: Linum tenue

text: Linum tenue

text: leaf

characteristic: title


characteristic: Authors

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: ELIXIR-Norway

text: not provided

characteristic: collector name

text: Norway

text: More og Romsdal

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: not provided

characteristic: isolation source host-associated


characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Norway

characteristic: geographic location (country and/or sea)

text: Rogaland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

unit: year

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: active surveillance in response to outbreak

characteristic: sample capture status

text: hCoV-19/Ireland/CE-NVRL-S22IRL00395546/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Clare

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/CE-NVRL-S22IRL00395566/2022


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/CE-NVRL-S22IRL00395547/2022

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Clare

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/CE-NVRL-S22IRL00395548/2022

characteristic: virus identifier


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

unit: years

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CE-NVRL-S22IRL00395561/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Clare

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/CE-NVRL-S22IRL00395557/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CE-NVRL-S22IRL00395550/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Clare

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/CE-NVRL-S22IRL00396455/2022

characteristic: title


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CE-NVRL-S22IRL00395544/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cavan

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/CN-NVRL-S22IRL00394854/2022


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-S22IRL00417968/2022

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/CO-NVRL-S22IRL00394856/2022

characteristic: virus identifier


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00417478/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: Severe acute respiratory syndrome coronavirus 2

text: hCoV-19/Ireland/CO-NVRL-S22IRL00418094/2022

characteristic: title


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-S22IRL00418111/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: active surveillance in response to outbreak

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00417978/2022


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-S22IRL00418093/2022

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00394650/2022

characteristic: virus identifier


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-S22IRL00417969/2022

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00417788/2022

characteristic: virus identifier


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-S22IRL00418110/2022

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00418077/2022


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-S22IRL00417792/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00418082/2022

characteristic: title


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-S22IRL00417971/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00417972/2022


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-S22IRL00394847/2022

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: Severe acute respiratory syndrome coronavirus 2

text: hCoV-19/Ireland/CO-NVRL-S22IRL00417766/2022

characteristic: virus identifier


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00418078/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: active surveillance in response to outbreak

text: hCoV-19/Ireland/CO-NVRL-S22IRL00418130/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00418076/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/CO-NVRL-S22IRL00417986/2022

characteristic: title


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-S22IRL00418074/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00417765/2022


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-S22IRL00418080/2022

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00418079/2022

characteristic: virus identifier


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-S22IRL00418075/2022

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00394832/2022

characteristic: virus identifier


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-S22IRL00418071/2022

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00395315/2022


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-S22IRL00395312/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: Severe acute respiratory syndrome coronavirus 2

text: hCoV-19/Ireland/CO-NVRL-S22IRL00418127/2022

characteristic: title


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00418070/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: active surveillance in response to outbreak

text: hCoV-19/Ireland/CO-NVRL-S22IRL00394834/2022

characteristic: title


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00395520/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/CO-NVRL-S22IRL00395521/2022

characteristic: title


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00395455/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/CW-NVRL-S22IRL00394766/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CW-NVRL-S22IRL00394751/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/CW-NVRL-S22IRL00394762/2022

characteristic: title


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CW-NVRL-S22IRL00394784/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/CW-NVRL-S22IRL00395076/2022

characteristic: title


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CW-NVRL-S22IRL00395077/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/CW-NVRL-S22IRL00394623/2022

characteristic: virus identifier


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CW-NVRL-S22IRL00395349/2022

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status

text: hCoV-19/Ireland/CW-NVRL-S22IRL00394424/2022

characteristic: virus identifier


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CW-NVRL-S22IRL00394421/2022

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Carlow

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: active surveillance in response to outbreak

characteristic: sample capture status

text: hCoV-19/Ireland/CW-NVRL-S22IRL00395365/2022


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CW-NVRL-S22IRL00395075/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00396193/2022

characteristic: title


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00394657/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00394687/2022


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00394547/2022

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/D-NVRL-S22IRL00394655/2022

characteristic: virus identifier


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00394664/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/D-NVRL-S22IRL00394164/2022

characteristic: title


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00394290/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00394710/2022

characteristic: title


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00394907/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00394173/2022

characteristic: title


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00395372/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: active surveillance in response to outbreak

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00395334/2022


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00394177/2022

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/D-NVRL-S22IRL00394278/2022

characteristic: virus identifier


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00394681/2022

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/D-NVRL-S22IRL00417602/2022

characteristic: virus identifier


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00394755/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/D-NVRL-S22IRL00395371/2022

characteristic: title


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00394258/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/D-NVRL-S22IRL00394138/2022

characteristic: title


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00394709/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/D-NVRL-S22IRL00394707/2022

characteristic: virus identifier


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00394706/2022

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00394676/2022


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00395085/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: active surveillance in response to outbreak

text: hCoV-19/Ireland/D-NVRL-S22IRL00394905/2022

characteristic: title


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00417623/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/D-NVRL-S22IRL00394684/2022

characteristic: virus identifier


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00394139/2022

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/D-NVRL-S22IRL00394682/2022

characteristic: virus identifier


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00394697/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/D-NVRL-S22IRL00394704/2022

characteristic: title


characteristic: ENA-LAST-UPDATE

text: NVRL

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00394430/2022

characteristic: virus identifier