characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-01-03

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


status: PUBLIC

tag: attribute

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

tag: Namespace:Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

characteristic: Submitter Id

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Hovedstaden

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Midtjylland

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Nordjylland

text: Human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Sjaelland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Syddanmark

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

text: Human

text: n_infections=2,last_infection_date=2020-11-23

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-139268/2021

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Sjaelland

text: Human

text: n_infections=2,last_infection_date=2020-09-28

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-30373/2020

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2021-11-08

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Nordjylland

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-17182/2020

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

text: n_infections=2,last_infection_date=2021-12-06

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-117368/2021

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Midtjylland

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

text: n_infections=2,last_infection_date=2022-01-10

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Molekylær Medicinsk Afdeling, Aarhus University Hospital, Aarhus, Denmark

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Midtjylland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Hovedstaden

text: Human

text: n_infections=2,last_infection_date=2020-12-28

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

text: Human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Midtjylland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Nordjylland

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Sjaelland

text: Human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Midtjylland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2021-12-20

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Hovedstaden

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-144280/2021

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

text: Human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Nordjylland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

text: Severe acute respiratory syndrome coronavirus 2

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Hovedstaden

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-26153/2021

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

text: active surveillance in response to outbreak


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Sjaelland

text: Human

text: n_infections=2,last_infection_date=2020-10-26

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Midtjylland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-01-17

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

text: Hovedstaden

text: Human

text: n_infections=2,last_infection_date=2020-11-16

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

text: Human

text: n_infections=2,last_infection_date=2020-06-29

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Universita degli studi di Milano

text: public

characteristic: INSDC status

tag: Namespace:Universita degli studi di Milano

text: bacterial strains isolated from human fresh fecal samples

text: Akkermansia muciniphila

text: Akkermansia muciniphila

text: AmaP1_Akkermansia muciniphila

characteristic: title


text: Universita degli studi di Milano

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: description

text: Akkermansia muciniphila

text: Akkermansia muciniphila

text: AmuP9_Akkermansia muciniphila


characteristic: ENA-FIRST-PUBLIC

text: Universita degli studi di Milano

characteristic: INSDC center name

text: public

text: Akkermansia muciniphila

text: Akkermansia muciniphila

text: Rcp22_Akkermansia muciniphila


text: Universita degli studi di Milano

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Akkermansia muciniphila

text: Akkermansia muciniphila

text: Sap1_Akkermansia muciniphila


text: Universita degli studi di Milano

text: public

text: Akkermansia muciniphila

text: Akkermansia muciniphila

text: Vtp7_Akkermansia muciniphila


text: Instituto de Salud Carlos III

text: public

tag: Namespace:Instituto de Salud Carlos III

characteristic: collection date

text: Spain

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Escherichia coli

text: Human

characteristic: isolation source

text: Escherichia coli

text: Escherichia coli


characteristic: ENA-CHECKLIST

text: Instituto de Salud Carlos III

text: public

text: Spain

text: diseased

text: Homo sapiens

text: Enterobacter roggenkampii

characteristic: isolate

text: Human

text: Enterobacter roggenkampii

characteristic: organism

text: Enterobacter roggenkampii


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Instituto de Salud Carlos III

text: public

characteristic: INSDC status

text: Spain

text: diseased

text: Homo sapiens

text: Enterobacter hormaechei

text: Human

text: Enterobacter hormaechei

text: Enterobacter hormaechei


text: Instituto de Salud Carlos III

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Spain

text: diseased

text: Homo sapiens

text: Enterobacter asburiae

text: Human

text: Enterobacter asburiae

text: Enterobacter asburiae

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: Instituto de Salud Carlos III

characteristic: INSDC center name

text: public

text: Spain

text: diseased

text: Homo sapiens

text: Klebsiella pneumoniae

text: Human

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Instituto de Salud Carlos III

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Spain

text: diseased

text: Homo sapiens

text: Klebsiella oxytoca

text: Human

text: Klebsiella oxytoca

text: Klebsiella oxytoca


text: Instituto de Salud Carlos III

text: public

characteristic: collection date

text: Spain

characteristic: geographic location (country and/or sea)

text: diseased

text: Homo sapiens

text: Serratia marcescens

text: Human

text: Serratia marcescens

text: Serratia marcescens


text: public

text: 67817:a087d193-798a-40f8-97bf-47a4c5382b12

tag: Namespace:Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research

text: freshwater biome [ENVO:00000873]

characteristic: broad-scale environmental context

text: GFBIO

characteristic: broker name

unit: m

characteristic: depth

text: Two liters of surface water from heated lake

characteristic: description

text: fresh water [ENVO:00002011]

characteristic: environmental medium

text: water

characteristic: environmental package

text: Poland

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Lichenskie, Konin

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: lake [ENVO:00000020]

characteristic: local environmental context

text: freshwater metagenome

text: Paradapt

characteristic: project name

characteristic: sample description

text: freshwater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 67812:a087d193-798a-40f8-97bf-47a4c5382b12

characteristic: Submitter Id

text: freshwater biome [ENVO:00000873]

text: GFBIO

characteristic: collection date

text: Two liters of surface water from unheated lake

text: fresh water [ENVO:00002011]

text: water

text: Poland

characteristic: geographic location (country and/or sea)

text: Skulskie PN, Konin

text: mimarks-survey

text: lake [ENVO:00000020]

text: freshwater metagenome

characteristic: organism

text: Paradapt

text: freshwater metagenome

text: Illumina MiSeq

text: true

characteristic: title

text: water


text: public

text: 67767:a087d193-798a-40f8-97bf-47a4c5382b12

text: freshwater biome [ENVO:00000873]

characteristic: broad-scale environmental context

text: GFBIO

characteristic: broker name

characteristic: depth

characteristic: description

text: fresh water [ENVO:00002011]

characteristic: environmental medium

text: water

characteristic: environmental package

text: Poland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Goplo, Konin

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: lake [ENVO:00000020]

characteristic: local environmental context

text: freshwater metagenome

text: Paradapt

characteristic: project name

characteristic: sample description

text: freshwater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 67724:a087d193-798a-40f8-97bf-47a4c5382b12

characteristic: Submitter Id

text: freshwater biome [ENVO:00000873]

text: GFBIO

characteristic: collection date

text: fresh water [ENVO:00002011]

text: water

text: Poland

characteristic: geographic location (country and/or sea)

text: Suszewskie, Konin

text: mimarks-survey

text: lake [ENVO:00000020]

text: freshwater metagenome

text: Paradapt

text: freshwater metagenome

text: Illumina MiSeq

text: true

characteristic: submitted to INSDC

characteristic: total depth of water column

text: water

characteristic: water environmental package


characteristic: GISAID Accession ID

text: public

tag: Namespace:Institute of Medical Virology, Zürich, Switzerland

text: SIB

characteristic: broker name

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text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba65091/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Stadtspital Triemli, Zürich, Switzerland

text: Switzerland

text: ZH

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba64ffa/2022

text: active surveillance not initiated by an outbreak


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SIB

text: Stadtspital Waid, Zürich, Switzerland

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba64fc4/2022

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba64fce/2022


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Switzerland

text: ZH

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba64ff4/2022

text: active surveillance in response to outbreak


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SIB

text: Universität Zürich, Zürich, Switzerland

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba64d46/2022

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Verena Kufner, Maryam Zaheri, Stefan Schmutz, Kevin Steiner, Riccarda Capaul, Guido Bloemberg, Michael Huber, Alexandra Trkola, Christian Beisel, Tobias Schär, Ina Nissen, Natascha Santacroce, Rebecca Denes, Mirjam Feldkamp, Elodie Burcklen, Chaoran Chen, Sarah Nadeau, Louis du Plessis, Ivan Topolsky, Kim Philipp Jablonski, Lara Fuhrmann, David Dreifuss, Pelin Burcak Icer, Matteo Carrara, Shuqing Yu, Franziska Singer, Niko Beerenwinkel, Tanja Stadler

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba64fcf/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Switzerland

text: ZH

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba64f28/2022


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SIB

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba65090/2022

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute of Medical Virology, Zürich, Switzerland

text: public

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba64ff6/2022


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Universität Zürich, Zürich, Switzerland

text: Switzerland

text: ZH

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba64f06/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SIB

text: Stadtspital Waid, Zürich, Switzerland

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba64ec3/2022

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Stadtspital Triemli, Zürich, Switzerland

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba64f42/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Stadtspital Waid, Zürich, Switzerland

text: Switzerland

text: ZH

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba64ec4/2022

text: active surveillance not initiated by an outbreak


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SIB

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba64f83/2022

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Stadtspital Waid, Zürich, Switzerland

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba64ec8/2022


characteristic: GISAID Accession ID

text: Laboratorio di Microbiologia, Dipartimento di Medicina di Laboratorio EOLAB, Ente Ospedaliero Cantonale, Bellinzona, Switzerland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Laboratorio di Diagnostica Molecolare, Servizio di Genetica Medica EOLAB, Ente Ospedaliero Cantonale; Via Mirasole 22/A, 6500 Bellinzona

text: Spina Valeria Romina, Gloria Gaudio, Gladys Martinetti Lucchini, Christian Beisel, Tobias Schär, Ina Nissen, Natascha Santacroce, Rebecca Denes, Mirjam Feldkamp, Elodie Burcklen, Chaoran Chen, Sarah Nadeau, Louis du Plessis, Ivan Topolsky, Kim Philipp Jablonski, Lara Fuhrmann, David Dreifuss, Pelin Burcak Icer, Matteo Carrara, Shuqing Yu, Franziska Singer, Niko Beerenwinkel, Tanja Stadler

text: Switzerland

text: TI

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: active surveillance in response to outbreak


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SIB

text: Stadtspital Waid, Zürich, Switzerland

text: Verena Kufner, Maryam Zaheri, Stefan Schmutz, Kevin Steiner, Riccarda Capaul, Guido Bloemberg, Michael Huber, Alexandra Trkola, Christian Beisel, Tobias Schär, Ina Nissen, Natascha Santacroce, Rebecca Denes, Mirjam Feldkamp, Elodie Burcklen, Chaoran Chen, Sarah Nadeau, Louis du Plessis, Ivan Topolsky, Kim Philipp Jablonski, Lara Fuhrmann, David Dreifuss, Pelin Burcak Icer, Matteo Carrara, Shuqing Yu, Franziska Singer, Niko Beerenwinkel, Tanja Stadler

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba64fc3/2022

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


text: THE UNIVERSITY OF MELBOURNE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:THE UNIVERSITY OF MELBOURNE

characteristic: Submitter Id

characteristic: cell type

text: human

characteristic: common name

text: Long read single cell sequencing of cortical projection neurons using nanopore high accuracy Q20 protocol.

characteristic: description

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-CHECKLIST

text: THE UNIVERSITY OF MELBOURNE

text: public

text: human

text: Long read single cell sequencing of cortical projection neurons using nanopore LSK110 protocol.

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-FIRST-PUBLIC

text: THE UNIVERSITY OF MELBOURNE

text: public

text: A549, H1975, h2228, H8383, Hcc827

text: human

text: Long read single cell sequencing of 5 cancer cell lines (raw data published in Tian et al 2021)

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-LAST-UPDATE

text: public

tag: Namespace:LONDON SCHOOL OF HYGIENE AND TROPICAL MEDICINE

characteristic: collection date

text: Hospital patient

text: Portugal

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: Lisbon

characteristic: isolation source

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


characteristic: External Id

text: LONDON SCHOOL OF HYGIENE AND TROPICAL MEDICINE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Hospital patient

text: Portugal

text: diseased

text: homo sapiens

characteristic: isolate

text: Lisbon

text: Klebsiella pneumoniae

characteristic: organism

text: Klebsiella pneumoniae


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: PRT

characteristic: Submitter Id

text: Hospital patient

text: Klebsiella

characteristic: genus

text: Portugal

text: Homo sapiens

characteristic: host

text: diseased

text: homo sapiens

text: Lisbon

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

characteristic: title

type: AMR curated data - CABBAGE

value: colistin

value: broth dilution

value: mg/L

value: Klebsiella pneumoniae


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: collection date

text: Hospital patient

characteristic: description

text: Portugal

text: diseased

text: homo sapiens

text: Centre

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


characteristic: External Id

text: public

text: Hospital patient

text: Portugal

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: North

characteristic: isolation source

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Waste water

text: Portugal

text: homo sapiens

characteristic: isolate

text: Lisbon

text: Klebsiella pneumoniae

characteristic: organism

text: Klebsiella pneumoniae


text: Infravec

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: African malaria mosquito

characteristic: common name

text: Anopheles rDNA are located on the sex chromosomes, often exclusively on the X chromosome, as for the Anopheles gambiae G3 and Anopheles arabiensis Dongola strains. This exclusively X-linked rDNA locus was used to develop a transgenic An. Gambiae G3 strain (?2-Ppo1) that expresses the I-Ppo1 endonuclease during male meiosis, which targets and cleaves An. gambiae 28S rDNA (Galizi et al., 2014). The rDNA locus of An. gambiae ASEMBO strain is located in both the X- and Y-chromosomes. To test whether recombination can occur between the rDNA loci of the An. gambiae sex chromosomes, Introgression of the An. gambiae YASEMBO into the transgenic meiotic rDNA-cleaving An. gambiae ?2-Ppo1 G3 strain was perfrmed. Backcrossing of the transgenic male offspring over multiple generations was conducted to selectively cleave the YASEMBO rDNA, while uncleaved XG3 chromosome was introduced every generation through backcrossing of wildtype An. gambiae G3 females. Sequencing was then conducted to assess whether after 24 generations of rDNA cleavage, this had resulted in repair, deletions, or other mutations of rDNA copies.

characteristic: infravec request number

text: Anopheles gambiae str. PEST

text: Anopheles gambiae str. PEST

characteristic: study accession

text: Anopheles gambiae ASEMBO sex chromosome evolution


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: GISAID Accession ID

text: Institute of Medical Virology, Zürich, Switzerland

text: public

text: SIB

characteristic: broker name

text: Universität Zürich, Zürich, Switzerland

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

text: ZH

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba65382/2022

characteristic: sample capture status

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: Stadtspital Waid, Zürich, Switzerland

text: Switzerland

characteristic: geographic location (country and/or sea)

text: ZH

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6522f/2022

characteristic: isolate

characteristic: organism

text: active surveillance not initiated by an outbreak


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: GISAID Accession ID

text: public

text: SIB

characteristic: broker name

text: Stadtspital Triemli, Zürich, Switzerland

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

text: ZH

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba651bd/2022

text: Severe acute respiratory syndrome coronavirus 2


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SIB

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba651bf/2022

characteristic: sample capture status

characteristic: title