characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

characteristic: collection date

text: CheckM v1.1.2

text: This sample represents a Pool HV Metagenome-Assembled Genome (MAG) from the metagenomic run(s): SRR3184006,SRR3184007,SRR3184008,SRR3184009,SRR3184010,SRR3184011,SRR3184012,SRR3184013,SRR3184014,SRR3184015,SRR3184016,SRR3184017,SRR3184018,SRR3184019,SRR3184084,SRR3184085,SRR3184086,SRR3184087,SRR3184088,SRR3184089,SRR3184090,SRR3184091,SRR3184092,SRR3184093,SRR3184094,SRR3184095,SRR3184096,SRR3184097,SRR3184098,SRR3184099,SRR3184100,SRR3184101,SRR3184102,SRR3184103,SRR3184104,SRR3184105,SRR3184106,SRR3184107,SRR3184108,SRR3184109,SRR3184110,SRR3191608,SRR3191609,SRR3191610,SRR3191611,SRR3191612,SRR3191613,SRR3191614,SRR3191615,SRR3191616,SRR3191617,SRR3191618,SRR3191619,SRR3191620,SRR3191621.

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: uncultured Pseudomonas sp.

characteristic: organism

text: Skin Microbial Genome Catalogue

text: SAMN04359882,SAMN04359883,SAMN04359884,SAMN04359885,SAMN04359886,SAMN04359887,SAMN04359888,SAMN04359889,SAMN04359890,SAMN04359891,SAMN04359892,SAMN04359893,SAMN04359894,SAMN04359895,SAMN04360129,SAMN04360130

text: uncultured Pseudomonas sp.

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: EpKQy1kEWa_bin.10.MAG

characteristic: title


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: metaSPAdes v.3.13.0

text: MaxBin2, MetaBat2, Concoct with default parameter of the Metawrap pipeline. Bin refinement module used from metawrap with default parameters

text: metaWRAP v1.2.1

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: uncultured Acinetobacter sp.

text: Skin Microbial Genome Catalogue

characteristic: project name

characteristic: sample derived from

text: uncultured Acinetobacter sp.

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: 8mkohYUsBG_bin.19.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

characteristic: collection date

text: CheckM v1.1.2

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: uncultured Pseudomonas sp.

characteristic: organism

text: Skin Microbial Genome Catalogue

text: uncultured Pseudomonas sp.

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: 0qhubNDpsD_bin.31.MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: metaSPAdes v.3.13.0

text: metaWRAP v1.2.1

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: Nesterenkonia massiliensis

text: Skin Microbial Genome Catalogue

characteristic: project name

characteristic: sample derived from

text: Nesterenkonia massiliensis

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: qIXTHDQm9Q_bin.38.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

characteristic: collection date

text: CheckM v1.1.2

text: This sample represents a Pool HV Metagenome-Assembled Genome (MAG) from the metagenomic run(s): SRR3184247,SRR3184248,SRR3184249,SRR3184250,SRR3184251,SRR3184252,SRR3184253,SRR3184254,SRR3184255,SRR3184256,SRR3184257,SRR3184258,SRR3184259,SRR3184260,SRR3184328,SRR3184329,SRR3184330,SRR3184331,SRR3184332,SRR3184333,SRR3184334,SRR3184335,SRR3184336,SRR3184337,SRR3184338,SRR3184339,SRR3184340,SRR3191642,SRR3191643,SRR3191644,SRR3191645,SRR3191646,SRR3191647,SRR3191652.

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: Bacillus paralicheniformis

characteristic: organism

text: Skin Microbial Genome Catalogue

text: SAMN04359909,SAMN04359910,SAMN04359911,SAMN04359912,SAMN04359913,SAMN04359914,SAMN04359915,SAMN04359916,SAMN04359917,SAMN04359918,SAMN04359919,SAMN04359920,SAMN04359921,SAMN04359922,SAMN04360135,SAMN04360136,SAMN04360137

text: Bacillus paralicheniformis

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: kGKOcqob9d_bin.18.MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: metaSPAdes v.3.13.0

text: metaWRAP v1.2.1

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: uncultured Exiguobacterium sp.

text: Skin Microbial Genome Catalogue

characteristic: project name

characteristic: sample derived from

text: uncultured Exiguobacterium sp.

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: CXrXActtXK_bin.3.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

characteristic: collection date

text: CheckM v1.1.2

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: Micrococcus lylae

characteristic: organism

text: Skin Microbial Genome Catalogue

text: SAMN04359815,SAMN04359816,SAMN04359817,SAMN04359818,SAMN04359819,SAMN04359820,SAMN04359821,SAMN04359822,SAMN04359823,SAMN04359824,SAMN04359825,SAMN04359826,SAMN04359827,SAMN04359828,SAMN04359829,SAMN04359830,SAMN04359831

text: Micrococcus lylae

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: 9Mf3tLPlw8_bin.11.MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: metaSPAdes v.3.13.0

text: metaWRAP v1.2.1

text: not provided

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Pool Time Metagenome-Assembled Genome (MAG) from the metagenomic run(s): SRR1631537,SRR1631538,SRR1631539,SRR1631540,SRR1631541,SRR1631542,SRR1631543,SRR1631544,SRR1631545,SRR1631546,SRR1631547,SRR1631548,SRR1631549,SRR1631550,SRR3184986,SRR3184987,SRR3185168,SRR3185169.

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: Falseniella ignava

text: Skin Microbial Genome Catalogue

characteristic: project name

characteristic: sample derived from

text: Falseniella ignava

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: wFhy9xKc4b_bin.13.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

characteristic: collection date

text: CheckM v1.1.2

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: Mycobacterium gordonae

characteristic: organism

text: Skin Microbial Genome Catalogue

text: Mycobacterium gordonae

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: 5Bjf6zM5h2_bin.13.MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes v.3.13.0

text: metaWRAP v1.2.1

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: uncultured Pseudonocardia sp.

text: Skin Microbial Genome Catalogue

characteristic: project name

characteristic: sample derived from

text: uncultured Pseudonocardia sp.

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: fqzdzO3UoH_bin.15.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

characteristic: collection date

text: CheckM v1.1.2

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: uncultured Phenylobacterium sp.

characteristic: organism

text: Skin Microbial Genome Catalogue

text: uncultured Phenylobacterium sp.

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: AsRitGSwam_bin.2.MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: metaSPAdes v.3.13.0

text: metaWRAP v1.2.1

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: Streptococcus oralis

text: Skin Microbial Genome Catalogue

characteristic: project name

characteristic: sample derived from

text: Streptococcus oralis

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: sCrU8qolUq_bin.9.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the Metawrap pipeline. Bin refinement module used from metawrap with default parameters

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

characteristic: collection date

text: CheckM v1.1.2

text: This sample represents a Pool HV Metagenome-Assembled Genome (MAG) from the metagenomic run(s): SRR3187439,SRR3187440,SRR3187441,SRR3187442,SRR3187443,SRR3187444,SRR3187445,SRR3187446,SRR3187447,SRR3187448,SRR3187449,SRR3187450,SRR3187451,SRR3187452,SRR3187735,SRR3187736,SRR3187737,SRR3187738,SRR3187739,SRR3187740,SRR3187741,SRR3187742,SRR3187743,SRR3187744,SRR3187745,SRR3187746,SRR3187747,SRR3187748,SRR3187749,SRR3187750,SRR3187751,SRR3187752,SRR3187753,SRR3187754,SRR3187755,SRR3187756,SRR3187757,SRR3187758,SRR3187759,SRR3187760,SRR3187761,SRR3187762,SRR3187763,SRR3187764,SRR3187765,SRR3187766,SRR3187767,SRR3187768,SRR3187769,SRR3187770,SRR3187771,SRR3187772,SRR3187773,SRR3187774,SRR3188118,SRR3188119,SRR3188120,SRR3188121,SRR3188122,SRR3188123,SRR3188124.

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: Methylobacterium radiotolerans

characteristic: organism

text: Skin Microbial Genome Catalogue

text: SAMN04360062,SAMN04360063,SAMN04360064,SAMN04360065,SAMN04360066,SAMN04360067,SAMN04360068,SAMN04360069,SAMN04360070,SAMN04360071,SAMN04360072,SAMN04360073,SAMN04360074,SAMN04360075,SAMN04360076,SAMN04360077,SAMN04360078

text: Methylobacterium radiotolerans

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: NERSuDNQqx_bin.2.MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: metaSPAdes v.3.13.0

text: metaWRAP v1.2.1

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: Staphylococcus schleiferi

text: Skin Microbial Genome Catalogue

characteristic: project name

characteristic: sample derived from

text: Staphylococcus schleiferi

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: hsh8qkeR7Z_bin.21.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

characteristic: collection date

text: CheckM v1.1.2

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: uncultured Cellvibrionales bacterium

characteristic: organism

text: Skin Microbial Genome Catalogue

text: uncultured Cellvibrionales bacterium

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: EQTbRQ2hqo_bin.8.MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: metaSPAdes v.3.13.0

text: metaWRAP v1.2.1

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Pool HV Metagenome-Assembled Genome (MAG) from the metagenomic run(s): SRR3184383,SRR3184384,SRR3184385,SRR3184386,SRR3184387,SRR3184388,SRR3184389,SRR3184390,SRR3184391,SRR3184392,SRR3184393,SRR3184394,SRR3184395,SRR3184396,SRR3184397,SRR3184491,SRR3184492,SRR3184493,SRR3184494,SRR3184495,SRR3184496,SRR3184497,SRR3184498,SRR3184499,SRR3191653,SRR3191654,SRR3191655,SRR3191656,SRR3191657,SRR3191658,SRR3191659,SRR3191660,SRR3191661,SRR3191662,SRR3191663,SRR3191664,SRR3191665,SRR3191666,SRR3191667,SRR3191668.

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: uncultured Micrococcus sp.

text: Skin Microbial Genome Catalogue

characteristic: project name

text: SAMN04359940,SAMN04359941,SAMN04359942,SAMN04359943,SAMN04359944,SAMN04359945,SAMN04359946,SAMN04359947,SAMN04359948,SAMN04359949,SAMN04359950,SAMN04359951,SAMN04360138,SAMN04360139,SAMN04360140,SAMN04360141,SAMN04360142

characteristic: sample derived from

text: uncultured Micrococcus sp.

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: VhI2ujv0TH_bin.1.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

text: not provided

characteristic: collection date

text: CheckM v1.1.2

text: This sample represents a Pool Time Metagenome-Assembled Genome (MAG) from the metagenomic run(s): SRR1631537,SRR1631538,SRR1631539,SRR1631540,SRR1631541,SRR1631542,SRR1631543,SRR1631544,SRR1631545,SRR1631546,SRR1631547,SRR1631548,SRR1631549,SRR1631550,SRR3184986,SRR3184987,SRR3185168,SRR3185169.

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: uncultured Ileibacterium sp.

characteristic: organism

text: Skin Microbial Genome Catalogue

text: uncultured Ileibacterium sp.

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: ugS3fGpEPm_bin.17.MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: metaSPAdes v.3.13.0

text: metaWRAP v1.2.1

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: uncultured Corynebacterium sp.

text: Skin Microbial Genome Catalogue

characteristic: project name

characteristic: sample derived from

text: uncultured Corynebacterium sp.

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: kYsyUcuiaT_bin.18.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

characteristic: collection date

text: CheckM v1.1.2

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: Fusicatenibacter saccharivorans

characteristic: organism

text: Skin Microbial Genome Catalogue

text: Fusicatenibacter saccharivorans

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: MY0ywXOdGT_bin.8.MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: metaSPAdes v.3.13.0

text: metaWRAP v1.2.1

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: uncultured Porphyromonas sp.

text: Skin Microbial Genome Catalogue

characteristic: project name

text: SAMN04359994,SAMN04359995,SAMN04359996,SAMN04359997,SAMN04359998,SAMN04359999,SAMN04360000,SAMN04360001,SAMN04360002,SAMN04360003,SAMN04360004,SAMN04360005,SAMN04360006,SAMN04360007,SAMN04360008,SAMN04360009,SAMN04360010

characteristic: sample derived from

text: uncultured Porphyromonas sp.

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: rfhJd5zLSv_bin.10.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

characteristic: collection date

text: CheckM v1.1.2

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: uncultured Leuconostoc sp.

characteristic: organism

text: Skin Microbial Genome Catalogue

text: uncultured Leuconostoc sp.

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: 7eDUVyrZHh_bin.16.MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: metaSPAdes v.3.13.0

text: MaxBin2, MetaBat2, Concoct with default parameter of the Metawrap pipeline. Bin refinement module used from metawrap with default parameters

text: metaWRAP v1.2.1

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: uncultured Micrococcus sp.

text: Skin Microbial Genome Catalogue

characteristic: project name

characteristic: sample derived from

text: uncultured Micrococcus sp.

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: 6HiazVSk7d_bin.21.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

characteristic: collection date

text: CheckM v1.1.2

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: uncultured Candidatus Saccharibacteria bacterium

characteristic: organism

text: Skin Microbial Genome Catalogue

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: ZZEVbxAAOO_bin.25.MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: metaSPAdes v.3.13.0

text: metaWRAP v1.2.1

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: uncultured Staphylococcaceae bacterium

text: Skin Microbial Genome Catalogue

characteristic: project name

characteristic: sample derived from

text: uncultured Staphylococcaceae bacterium

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: 16ZELyzkmn_bin.35.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

characteristic: collection date

text: CheckM v1.1.2

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: uncultured Alloprevotella sp.

characteristic: organism

text: Skin Microbial Genome Catalogue

text: SAMN04360096,SAMN04360097,SAMN04360098,SAMN04360099,SAMN04360100,SAMN04360101,SAMN04360102,SAMN04360103,SAMN04360104,SAMN04360105,SAMN04360106,SAMN04360107,SAMN04360108,SAMN04360109,SAMN04360110,SAMN04360111

text: uncultured Alloprevotella sp.

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: sQ8DMpM8vM_bin.21.MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: metaSPAdes v.3.13.0

text: metaWRAP v1.2.1

text: not provided

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: Campylobacter ureolyticus

text: Skin Microbial Genome Catalogue

characteristic: project name

characteristic: sample derived from

text: Campylobacter ureolyticus

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: tYBd7NbyTZ_bin.28.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

text: not provided

characteristic: collection date

text: CheckM v1.1.2

text: This sample represents a Pool Site Metagenome-Assembled Genome (MAG) from the metagenomic run(s): SRR3181894,SRR3181895,SRR3181896,SRR3182295,SRR3182296,SRR3182297,SRR3182298,SRR3183425,SRR3183426,SRR3183427,SRR3183428,SRR3183429,SRR3183430,SRR3183431,SRR3183788,SRR3183789,SRR3183790,SRR3183791,SRR3184006,SRR3184007,SRR3184008,SRR3184247,SRR3184248,SRR3184383,SRR3184384,SRR3184801,SRR3184947,SRR3184948,SRR3184949,SRR3184950,SRR3184951,SRR3187093,SRR3187439,SRR3187440,SRR3187441,SRR3187442,SRR3187443.

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: uncultured Xanthomonadaceae bacterium

characteristic: organism

text: Skin Microbial Genome Catalogue

text: SAMN04359747,SAMN04359781,SAMN04359815,SAMN04359849,SAMN04359882,SAMN04359909,SAMN04359940,SAMN04359966,SAMN04359994,SAMN04360028,SAMN04360062

text: uncultured Xanthomonadaceae bacterium

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: TctwZLRTrK_bin.7.MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes v.3.13.0

text: metaWRAP v1.2.1

text: not provided

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: uncultured Actinomyces sp.

text: Skin Microbial Genome Catalogue

characteristic: project name

text: SAMN04359759,SAMN04359793,SAMN04359827,SAMN04359861,SAMN04359892,SAMN04359919,SAMN04359977,SAMN04360006,SAMN04360040,SAMN04360074,SAMN04360107,SAMN04360142

characteristic: sample derived from

text: uncultured Actinomyces sp.

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: YSbNyl2jJB_bin.12.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

text: not provided

characteristic: collection date

text: CheckM v1.1.2

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: Streptococcus mutans

characteristic: organism

text: Skin Microbial Genome Catalogue

text: Streptococcus mutans

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: kNHPwAnfK3_bin.39.MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: metaSPAdes v.3.13.0

text: metaWRAP v1.2.1

text: not provided

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: uncultured Psychrobacter sp.

text: Skin Microbial Genome Catalogue

characteristic: project name

characteristic: sample derived from

text: uncultured Psychrobacter sp.

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: vLV91YX4HA_bin.53.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

text: not provided

characteristic: collection date

text: CheckM v1.1.2

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: uncultured Actinomyces sp.

characteristic: organism

text: Skin Microbial Genome Catalogue

text: uncultured Actinomyces sp.

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: 08RxfOTakB_bin.6.MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: metaSPAdes v.3.13.0

text: MaxBin2, MetaBat2, Concoct with default parameter of the Metawrap pipeline. Bin refinement module used from metawrap with default parameters

text: metaWRAP v1.2.1

text: not provided

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: uncultured Actinobaculum sp.

text: Skin Microbial Genome Catalogue

characteristic: project name

characteristic: sample derived from

text: uncultured Actinobaculum sp.

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: qr58jkBuJe_bin.62.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

text: not provided

characteristic: collection date

text: CheckM v1.1.2

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: Gordonia bronchialis

characteristic: organism

text: Skin Microbial Genome Catalogue

text: Gordonia bronchialis

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: vqGdmh9Yf2_bin.68.MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: metaSPAdes v.3.13.0

text: metaWRAP v1.2.1

text: not provided

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: uncultured Kocuria sp.

text: Skin Microbial Genome Catalogue

characteristic: project name

characteristic: sample derived from

text: uncultured Kocuria sp.

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Im86wBCoDP_bin.76.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

text: not provided

characteristic: collection date

text: CheckM v1.1.2

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: uncultured Haemophilus sp.

characteristic: organism

text: Skin Microbial Genome Catalogue

text: uncultured Haemophilus sp.

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: Wmoz0mH80H_bin.78.MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: metaSPAdes v.3.13.0

text: metaWRAP v1.2.1

text: not provided

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Pool Time Metagenome-Assembled Genome (MAG) from the metagenomic run(s): SRR1631537,SRR1631538,SRR1631539,SRR1631540,SRR1631541,SRR1631542,SRR1631543,SRR1631544,SRR1631545,SRR1631546,SRR1631547,SRR1631548,SRR1631549,SRR1631550,SRR3184986,SRR3184987,SRR3185168,SRR3185169.

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: uncultured Porphyromonas sp.

text: Skin Microbial Genome Catalogue

characteristic: project name

characteristic: sample derived from

text: uncultured Porphyromonas sp.

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: dfyplJ5hpi_bin.32.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

text: not provided

characteristic: collection date

text: CheckM v1.1.2

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: uncultured Rothia sp.

characteristic: organism

text: Skin Microbial Genome Catalogue

text: uncultured Rothia sp.

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: 41K0WT6IWA_bin.8.MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: metaSPAdes v.3.13.0

text: metaWRAP v1.2.1

text: not provided

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: uncultured Granulicatella sp.

text: Skin Microbial Genome Catalogue

characteristic: project name

characteristic: sample derived from

text: uncultured Granulicatella sp.

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: DnPr25QUng_bin.86.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

text: not provided

characteristic: collection date

text: CheckM v1.1.2

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: Skin Microbial Genome Catalogue

text: SAMN04359751,SAMN04359785,SAMN04359819,SAMN04359853,SAMN04359885,SAMN04359970,SAMN04359998,SAMN04360032,SAMN04360066,SAMN04360099,SAMN04360135,SAMN04360138

text: uncultured Lachnospiraceae bacterium

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: 9xKKfHuXT3_bin.27.MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes v.3.13.0

text: metaWRAP v1.2.1

text: not provided

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: Stenotrophomonas maltophilia

text: Skin Microbial Genome Catalogue

characteristic: project name

characteristic: sample derived from

text: Stenotrophomonas maltophilia

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: RyeJoPAFE0_bin.29.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

text: not provided

characteristic: collection date

text: CheckM v1.1.2

text: This sample represents a Pool Site Metagenome-Assembled Genome (MAG) from the metagenomic run(s): SRR3182032,SRR3182033,SRR3182034,SRR3182035,SRR3182036,SRR3183283,SRR3183284,SRR3183285,SRR3183592,SRR3183593,SRR3183594,SRR3183595,SRR3183596,SRR3183880,SRR3183881,SRR3183882,SRR3184338,SRR3184339,SRR3184340,SRR3184498,SRR3184499,SRR3185149,SRR3185150,SRR3185151,SRR3185152,SRR3185153,SRR3187139,SRR3187140,SRR3187141,SRR3187142,SRR3187143,SRR3188124,SRR3189150,SRR3189151,SRR3189152,SRR3189153,SRR3189154,SRR3191617,SRR3191618,SRR3191619,SRR3191620,SRR3191621,SRR3191699,SRR3191700,SRR3191701,SRR3191702,SRR3191703.

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: uncultured Psychrobacter sp.

characteristic: organism

text: Skin Microbial Genome Catalogue

text: SAMN04359763,SAMN04359797,SAMN04359831,SAMN04359864,SAMN04359922,SAMN04359951,SAMN04360010,SAMN04360044,SAMN04360078,SAMN04360111,SAMN04360130,SAMN04360148

text: uncultured Psychrobacter sp.

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: iOw9ipA67E_bin.14.MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: metaSPAdes v.3.13.0

text: MaxBin2, MetaBat2, Concoct with default parameter of the Metawrap pipeline. Bin refinement module used from metawrap with default parameters

text: metaWRAP v1.2.1

text: not provided

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: uncultured Stenotrophomonas sp.

text: Skin Microbial Genome Catalogue

characteristic: project name

characteristic: sample derived from

text: uncultured Stenotrophomonas sp.

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: JtgDid2MmW_bin.9.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

text: not provided

characteristic: collection date

text: CheckM v1.1.2

text: This sample represents a Pool Site Metagenome-Assembled Genome (MAG) from the metagenomic run(s): SRR3182027,SRR3182028,SRR3182029,SRR3182030,SRR3182031,SRR3182383,SRR3182384,SRR3182385,SRR3183587,SRR3183588,SRR3183589,SRR3183590,SRR3183591,SRR3184108,SRR3184109,SRR3184110,SRR3184335,SRR3184336,SRR3184337,SRR3184497,SRR3185144,SRR3185145,SRR3185146,SRR3185147,SRR3185148,SRR3187133,SRR3187134,SRR3187135,SRR3187136,SRR3187137,SRR3187138,SRR3188118,SRR3188119,SRR3188120,SRR3188121,SRR3188122,SRR3188123,SRR3189145,SRR3189146,SRR3189147,SRR3189148,SRR3189149,SRR3191694,SRR3191695,SRR3191696,SRR3191697,SRR3191698.

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: uncultured Anaerococcus sp.

characteristic: organism

text: Skin Microbial Genome Catalogue

text: SAMN04359762,SAMN04359796,SAMN04359830,SAMN04359895,SAMN04359921,SAMN04359950,SAMN04360009,SAMN04360043,SAMN04360077,SAMN04360110,SAMN04360147

text: uncultured Anaerococcus sp.

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: RnGgPYTvE4_bin.5.MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: metaSPAdes v.3.13.0

text: metaWRAP v1.2.1

text: not provided

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Pool Time Metagenome-Assembled Genome (MAG) from the metagenomic run(s): SRR1621001,SRR3181997,SRR3181998,SRR3181999,SRR3182000,SRR3182001,SRR3182002,SRR3182003,SRR3182004,SRR3182005,SRR3182006,SRR3182125,SRR3182126,SRR3182127,SRR3182128,SRR3182129,SRR3182130,SRR3182131,SRR3182132,SRR3182133,SRR3182134.

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: uncultured Porphyromonas sp.

text: Skin Microbial Genome Catalogue

characteristic: project name

characteristic: sample derived from

text: uncultured Porphyromonas sp.

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ils9kvTNqr_bin.25.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

text: not provided

characteristic: collection date

text: CheckM v1.1.2

text: This sample represents a Pool Time Metagenome-Assembled Genome (MAG) from the metagenomic run(s): SRR1631537,SRR1631538,SRR1631539,SRR1631540,SRR1631541,SRR1631542,SRR1631543,SRR1631544,SRR1631545,SRR1631546,SRR1631547,SRR1631548,SRR1631549,SRR1631550,SRR3184986,SRR3184987,SRR3185168,SRR3185169.

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: Skin Microbial Genome Catalogue

text: uncultured Clostridia bacterium

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: 7PkdMwDRcy_bin.37.MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: metaSPAdes v.3.13.0

text: metaWRAP v1.2.1

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: Salinicoccus qingdaonensis

text: Skin Microbial Genome Catalogue

characteristic: project name

text: SAMN04359764,SAMN04359765,SAMN04359766,SAMN04359767,SAMN04359768,SAMN04359769,SAMN04359770,SAMN04359771,SAMN04359772,SAMN04359773,SAMN04359774,SAMN04359775,SAMN04359776,SAMN04359777,SAMN04359778,SAMN04359779,SAMN04359780

characteristic: sample derived from

text: Salinicoccus qingdaonensis

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: mwMqYjxNTS_bin.13.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIH/NHGRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v.3.13.0

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.2.1

characteristic: binning software

characteristic: collection date

text: CheckM v1.1.2

text: human-associated habitat

text: human skin

text: skin

text: USA

text: metagenome-assembled genome

text: human skin

characteristic: isolation source

text: human skin metagenome

text: Faecalibacterium prausnitzii

characteristic: organism

text: Skin Microbial Genome Catalogue

text: Faecalibacterium prausnitzii

text: Illumina

text: multi-marker approach

text: Metagenome-assembled genome: YC39qDea9p_bin.14.MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIH/NHGRI

text: public

text: metaSPAdes v.3.13.0

text: metaWRAP v1.2.1

text: not provided

characteristic: completeness score

text: CheckM v1.1.2

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Pool Time Metagenome-Assembled Genome (MAG) from the metagenomic run(s): SRR1620996,SRR3182032,SRR3182033,SRR3182034,SRR3182035,SRR3182036,SRR3182291,SRR3182292,SRR3182293,SRR3182294.

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: human skin

characteristic: environment (feature)

text: skin

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: human skin

text: human skin metagenome

characteristic: metagenomic source

text: Jeotgalicoccus marinus

text: Skin Microbial Genome Catalogue

characteristic: project name

characteristic: sample derived from

text: Jeotgalicoccus marinus

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: VH8NOi5sr4_bin.11.MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Cantacuzino NIMMRD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Cantacuzino NIMMRD

characteristic: Submitter Id

characteristic: collection date

text: Romania

text: diseased

characteristic: host health state

text: Home sapiens

characteristic: host scientific name

characteristic: isolate

text: blood

characteristic: isolation source

characteristic: lat lon

text: Klebsiella pneumoniae U-0608239

characteristic: organism

text: Klebsiella pneumoniae U-0608239

characteristic: strain

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Cantacuzino NIMMRD

text: public

text: Romania

characteristic: geographic location (country and/or sea)

text: diseased

text: Home sapiens

text: plague

text: Klebsiella pneumoniae U-0608239

text: Klebsiella pneumoniae U-0608239


characteristic: External Id

text: Cantacuzino NIMMRD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Romania

text: diseased

text: Home sapiens

text: bronchi

text: Klebsiella pneumoniae U-0608239

text: Klebsiella pneumoniae U-0608239


text: Cantacuzino NIMMRD

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Romania

text: diseased

text: Home sapiens

text: urine

text: Klebsiella pneumoniae U-0608239

text: Klebsiella pneumoniae U-0608239


text: public

tag: Namespace:Wellcome - MRC Cambridge Stem Cell Institute and Department of Surgery, University of Cambridge

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: forward programmed hepatocyte

characteristic: cell type

text: human

characteristic: common name

text: Protocols: Human fetal liver tissue was dissected from third trimester embryos, from patients undergoing elective termination. RNA was extracted using the GenElute Mammalian Total RNA kit (Sigma). Library preparation was performed by the NGS library facility of the Wellcome - MRC Cambridge Stem Cell Institute (Cambridge, UK).

characteristic: description

text: embryo

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: differentiated in vitro from human embryonic stem cells

characteristic: growth condition

text: Homo sapiens

text: Homo sapiens

text: inner cell mass

characteristic: organism part

text: embryonic stem cell

characteristic: progenitor cell type

characteristic: replicate

text: Homo sapiens


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Wellcome - MRC Cambridge Stem Cell Institute and Department of Surgery, University of Cambridge

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ArrayExpress

text: forward programmed hepatocyte

text: human

text: embryo

text: normal

text: wild type genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: inner cell mass

text: embryonic stem cell

text: Homo sapiens

characteristic: title


text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: fetal liver cell

characteristic: cell type

text: human

characteristic: common name

text: Protocols: FoP-Heps were differentiated from hESCs by overexpression of a combination of 4 TFs (HNF1A, FOXA3, HNF6, RORc). RNA was extracted using the GenElute Mammalian Total RNA kit (Sigma). Library preparation was performed by the NGS library facility of the Wellcome - MRC Cambridge Stem Cell Institute (Cambridge, UK).

characteristic: description

text: third trimester fetus

text: normal

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens


text: DEEP, Stockholm University

text: public

tag: Namespace:DEEP, Stockholm University

text: Rubia cordifolia sample BO005a

text: Rubia cordifolia

text: Rubia cordifolia

text: P.A. Luke & W.R.Q Luke 9510 (UPS)

characteristic: specimen voucher

text: Rubia cordifolia sample BO005a


characteristic: ENA-CHECKLIST

text: DEEP, Stockholm University

text: public

text: Prismatomeris fragrans sample CA031

text: Prismatomeris fragrans

text: Prismatomeris fragrans

text: Kainulainen et al. 39 (S)

text: Prismatomeris fragrans sample CA031


characteristic: ENA-FIRST-PUBLIC

text: DEEP, Stockholm University

text: public

text: Faramea multiflora sample DB007a

text: Faramea multiflora

text: Faramea multiflora

text: Salino 3825 (MO )

text: Faramea multiflora sample DB007a


characteristic: ENA-LAST-UPDATE

text: DEEP, Stockholm University

text: public

text: Paracorynanthe antankarana sample DE066a

text: Paracorynanthe antankarana

text: Paracorynanthe antankarana

text: B. Bremer et al. 5156 (S)


characteristic: External Id

text: DEEP, Stockholm University

text: public

text: Carpacoce spermacocea sample DE067

text: Carpacoce spermacocea

text: Carpacoce spermacocea

text: Bremer et al. 4385 (UPS)

text: Carpacoce spermacocea sample DE067


text: DEEP, Stockholm University

characteristic: INSDC center name

text: public

text: Cinchona calisaya sample DE068

text: Cinchona calisaya

text: Cinchona calisaya

text: S.G. Razafimandimbison & A. Razafimanantsoa 471 (UPS)

text: Cinchona calisaya sample DE068


text: DEEP, Stockholm University

characteristic: INSDC first public

text: public

text: Saldinia pallida sample AA052a

text: Saldinia pallida

text: Saldinia pallida

text: Bremer et al. 4038-BB38 (UPS)

text: Saldinia pallida sample AA052a


text: DEEP, Stockholm University

characteristic: INSDC last update

text: public

text: Rubia cordifolia sample BO005b

text: Rubia cordifolia

text: Rubia cordifolia

text: P.A. Luke & W.R.Q Luke 9510 (UPS)

text: Rubia cordifolia sample BO005b


text: DEEP, Stockholm University

text: public

text: Paracorynanthe antankarana sample DE066b

text: Paracorynanthe antankarana

characteristic: organism

text: Paracorynanthe antankarana

text: B. Bremer et al. 5156 (S)


text: DEEP, Stockholm University

text: public

text: Saldinia pallida sample AA052b

text: Saldinia pallida

text: Saldinia pallida

text: Bremer et al. 4038-BB38 (UPS)

text: Saldinia pallida sample AA052b

characteristic: title


text: DEEP, Stockholm University

text: public

characteristic: INSDC status

text: Faramea multiflora sample DB007b

text: Faramea multiflora

text: Faramea multiflora

text: Salino 3825 (MO)

text: Faramea multiflora sample DB007b


text: DEEP, Stockholm University

text: public

characteristic: SRA accession

text: Danais nigra sample DB070

text: Danais nigra

text: Danais nigra

text: N. S. Rasoanaivo & A. J. Tahinarivony 69 (S)

text: Danais nigra sample DB070


text: DEEP, Stockholm University

text: public

characteristic: Submitter Id

text: Gaertnera obovata sample CI009

text: Gaertnera obovata

text: Gaertnera obovata

text: Razafimandimbison et al. 980 (S)

text: Gaertnera obovata sample CI009


text: DEEP, Stockholm University

text: public

text: Puffia gerrardii sample CM050

text: Puffia gerrardii

text: Puffia gerrardii

text: Razafimandimbison et al. 1244 (S)

text: Puffia gerrardii sample CM050


text: DEEP, Stockholm University

text: public

text: Cyanoneuron cyaneum sample BZ084

text: Cyanoneuron cyaneum

text: Cyanoneuron cyaneum

text: Bogner 1457 (L)

text: Cyanoneuron cyaneum sample BZ084


text: DEEP, Stockholm University

text: public

text: Exallage chrysotricha sample BZ040

text: Exallage chrysotricha

text: Exallage chrysotricha

text: Lin Qinzhong 2004180 (MO)

text: Exallage chrysotricha sample BZ040


text: DEEP, Stockholm University

text: public

text: Psychotria mahonii sample AG024

text: Psychotria mahonii

text: Psychotria mahonii

text: Luke 8370 (UPS)

text: Psychotria mahonii sample AG024


text: DEEP, Stockholm University

text: public

text: Alseis lugonis sample BD032

text: Alseis lugonis

text: Alseis lugonis

text: Bremer et al. 3353 (UPS)

text: Alseis lugonis sample BD032


text: DEEP, Stockholm University

text: public

text: Craterispermum sp. sample CK013

text: Craterispermum sp. ck13

text: Craterispermum sp. ck13

text: Razafimandimbison et al. 1168 (S)

text: Craterispermum sp. sample CK013


text: DEEP, Stockholm University

text: public

text: Psychotria ankarensis sample AF076

text: Psychotria ankarensis

text: Psychotria ankarensis

text: Razafimandimbison et al. 405 (UPS)

text: Psychotria ankarensis sample AF076


text: DEEP, Stockholm University

text: public

text: Serissa foetida sample C0005

text: Serissa japonica

text: Serissa japonica

text: Bremer 2735 (UPS)

text: Serissa foetida sample C0005


text: DEEP, Stockholm University

text: public

text: Rudgea recurva sample AE034

text: Rudgea recurva

text: Rudgea recurva

text: Pirani et al. 4899 (SPF)

text: Rudgea recurva sample AE034


text: DEEP, Stockholm University

text: public

text: Leptostigma pilosum sample CX099

text: Leptostigma pilosum

text: Leptostigma pilosum

text: Asplund 7171 (UPS)

text: Leptostigma pilosum sample CX099


text: DEEP, Stockholm University

text: public

text: Urophyllum arboreum sample BA031

text: Urophyllum arboreum

text: Urophyllum arboreum

text: Boeea 7887 (S)

text: Urophyllum arboreum sample BA031


text: DEEP, Stockholm University

text: public

text: Seychellea sechellarum sample CM080

text: Seychellea sechellarum

text: Seychellea sechellarum

text: C. Morel 57a (SEY)

text: Seychellea sechellarum sample CM080


text: DEEP, Stockholm University

text: public

text: Diodella sarmentosa sample CG025

text: Diodella sarmentosa

text: Diodella sarmentosa

text: Bremer et al. 5229 (S)

text: Diodella sarmentosa sample CG025


text: DEEP, Stockholm University

text: public

text: Phyllis nobla sample CY051

text: Phyllis nobla

text: Phyllis nobla

text: Wikstr�m et al. 76 (S)

text: Phyllis nobla sample CY051


text: DEEP, Stockholm University

text: public

text: Mycetia bracteata sample CD007

text: Mycetia bracteata

text: Mycetia bracteata

text: Steward & Cheo 1105 (S)

text: Mycetia bracteata sample CD007


text: DEEP, Stockholm University

text: public

text: Amphidasya longicalycina sample AX027

text: Amphidasya longicalycina

text: Amphidasya longicalycina

text: Huber 2963 (CR)

text: Amphidasya longicalycina sample AX027


text: DEEP, Stockholm University

text: public

text: Chamaepentas hindsioides sample AI014

text: Chamaepentas hindsioides

text: Chamaepentas hindsioides

text: Iversen et al. 85101 (UPS)

text: Chamaepentas hindsioides sample AI014


text: DEEP, Stockholm University

text: public

text: Ophiorrhiza darwinii sample CY100

text: Ophiorrhiza darwinii

text: Ophiorrhiza darwinii

text: Swenson et al. 1411 (S)

text: Ophiorrhiza darwinii sample CY100


text: DEEP, Stockholm University

text: public

text: Craterispermum schweinfurthii sample CL038

text: Craterispermum schweinfurthii

text: Craterispermum schweinfurthii

text: J. D & E. G. Chapman 9364 (UPS)


text: DEEP, Stockholm University

text: public

text: Nertera dichondrifolia sample CY003

text: Nertera dichondrifolia

text: Nertera dichondrifolia

text: Tibell NZ119 (UPS)

text: Nertera dichondrifolia sample CY003


text: DEEP, Stockholm University

text: public

text: Glionnetia sericea sample CA098

text: Glionnetia sericea

text: Glionnetia sericea

text: Beaver 3 (S)

text: Glionnetia sericea sample CA098


text: DEEP, Stockholm University

text: public

text: Ronabea latifolia sample AZ001

text: Ronabea latifolia

text: Ronabea latifolia

text: Contreras 9152 (S)

text: Ronabea latifolia sample AZ001


text: DEEP, Stockholm University

text: public

text: Pagamea capitata sample CA030

text: Pagamea capitata

text: Pagamea capitata

text: Pipoly 9176 (MEXU)

text: Pagamea capitata sample CA030


text: DEEP, Stockholm University

text: public

text: Luculia pinceana sample AZ040

text: Luculia pinceana

text: Luculia pinceana

text: Thin et al. 3061 (AAU)

text: Luculia pinceana sample AZ040


text: DEEP, Stockholm University

text: public

text: Lasianthus strigosus sample CH072

text: Lasianthus strigosus

text: Lasianthus strigosus

text: Bremer & Bremer 3902 (UPS)

text: Lasianthus strigosus sample CH072


text: DEEP, Stockholm University

text: public

text: Dunnia sinensis sample BC005

text: Dunnia sinensis

text: Dunnia sinensis

text: Xinhui 16 (in Ge et al, 2002)

text: Dunnia sinensis sample BC005


text: DEEP, Stockholm University

text: public

text: Schizocolea linderi sample CH081b

text: Schizocolea linderi

text: Schizocolea linderi

text: Adam 20116 (UPS)

text: Schizocolea linderi sample CH081b


text: DEEP, Stockholm University

text: public

text: Plocama dubia sample AH009

text: Plocama dubia

text: Plocama dubia

text: Rafei & Zangooei 25651 (FUHM)

text: Plocama dubia sample AH009


text: DEEP, Stockholm University

text: public

text: Spermadictyon suaveolens sample B0110

text: Spermadictyon suaveolens

text: Spermadictyon suaveolens

text: Bremer 3133 (UPS)

text: Spermadictyon suaveolens sample B0110


text: DEEP, Stockholm University

text: public

text: Kelloggia galioides sample T0054a

text: Kelloggia galioides

text: Kelloggia galioides

text: Holmgren et al. 2437 (UPS)

text: Kelloggia galioides sample T0054a


text: DEEP, Stockholm University

text: public

text: Schradera rotundata sample CA038

text: Schradera rotundata

text: Schradera rotundata

text: Gentry 5641 (S)

text: Schradera rotundata sample CA038


text: DEEP, Stockholm University

text: public

text: Mitchella repens sample BZ092

text: Mitchella repens

text: Mitchella repens

text: Atha and Gonzalez 1443a (MEXU)

text: Mitchella repens sample BZ092


text: DEEP, Stockholm University

text: public

text: Normandia neocaledonica sample DE075

text: Normandia neocaledonica

text: Normandia neocaledonica

text: Selling 125b (S)

text: Normandia neocaledonica sample DE075


text: DEEP, Stockholm University

text: public

text: Paederia ciliata sample CA022

text: Paederia ciliata

text: Paederia ciliata

text: Campos et al. 4919 (MEXU)

text: Paederia ciliata sample CA022


text: DEEP, Stockholm University

text: public

text: Colletoecema dewevrei sample BD002a

text: Colletoecema dewevrei

text: Colletoecema dewevrei

text: Lisowski 47195 (K)

text: Colletoecema dewevrei sample BD002a


text: DEEP, Stockholm University

text: public

text: Theligonum japonicum sample BV076a

text: Theligonum japonicum

text: Theligonum japonicum

text: Togashi 6807 (P)

text: Theligonum japonicum sample BV076a


text: DEEP, Stockholm University

text: public

text: Appunia guatemalensis sample AQ075

text: Appunia guatemalensis

text: Appunia guatemalensis

text: Contreras 8983 (S)

text: Appunia guatemalensis sample AQ075


text: DEEP, Stockholm University

text: public

text: Raritebe palicoureoides sample AY100

text: Raritebe palicoureoides

text: Raritebe palicoureoides

text: Antonio 1697 (AAU)

text: Raritebe palicoureoides sample AY100


text: DEEP, Stockholm University

text: public

text: Theligonum japonicum sample BV076b

text: Theligonum japonicum

text: Theligonum japonicum

text: Togashi 6807 (P)

text: Theligonum japonicum sample BV076b


text: DEEP, Stockholm University

text: public

text: Schizocolea linderi sample CH081a

text: Schizocolea linderi

text: Schizocolea linderi

text: Adam 20116 (UPS)

text: Schizocolea linderi sample CH081a


text: DEEP, Stockholm University

text: public

text: Argostemma elatostemma sample BL040

text: Argostemma elatostemma

text: Argostemma elatostemma

text: Bremer and Bremer 1722 (S)

text: Argostemma elatostemma sample BL040


text: DEEP, Stockholm University

text: public

text: Rennellia subsessilis sample CB078

text: Rennellia subsessilis

text: Rennellia subsessilis

text: Y.W. Low & Wong LYW 359 (KLU)

text: Rennellia subsessilis sample CB078


text: DEEP, Stockholm University

text: public

text: Sherardia arvensis sample AG064

text: Sherardia arvensis

text: Sherardia arvensis

text: Andreasen 345 (SBT)

text: Sherardia arvensis sample AG064


text: DEEP, Stockholm University

text: public

text: Schradera nervulosa sample CX040

text: Schradera nervulosa

text: Schradera nervulosa

text: Puff 961216-2/2 (WU)

text: Schradera nervulosa sample CX040


text: DEEP, Stockholm University

text: public

text: Pseudopyxis heterophylla sample BX093

text: Pseudopyxis heterophylla

text: Pseudopyxis heterophylla

text: K.�. Dahlstrand s.n. (GB)

text: Pseudopyxis heterophylla sample BX093


text: DEEP, Stockholm University

text: public

text: Otiophora caerulea sample AP063

text: Otiophora caerulea

text: Otiophora caerulea

text: Dessein 367 (BR)

text: Otiophora caerulea sample AP063


text: DEEP, Stockholm University

text: public

text: Ophiorrhiza mungos sample CZ012

text: Ophiorrhiza mungos

text: Ophiorrhiza mungos

text: USA Typhus Commission 525 (S)

text: Ophiorrhiza mungos sample CZ012


text: DEEP, Stockholm University

text: public

text: Gynochthodes officinalis sample BZ099

text: Gynochthodes officinalis

text: Gynochthodes officinalis

text: Kr�ger et al. 9 (S)

text: Gynochthodes officinalis sample BZ099


text: DEEP, Stockholm University

text: public

text: Didymaea alsinoides sample M0004

text: Didymaea alsinoides

text: Didymaea alsinoides

text: Keller 1901 (CAS)

text: Didymaea alsinoides sample M0004


text: DEEP, Stockholm University

text: public

text: Plocama tinctoria sample AH008

text: Plocama tinctoria

text: Plocama tinctoria

text: Thulin 10946 (UPS)

text: Plocama tinctoria sample AH008


text: DEEP, Stockholm University

text: public

text: Airosperma vanuense sample AP035

text: Airosperma vanuense

text: Airosperma vanuense

text: Smith 8214 (P)

text: Airosperma vanuense sample AP035


text: DEEP, Stockholm University

text: public

text: Sabicea marojejyensis sample CG080

text: Sabicea marojejyensis

text: Sabicea marojejyensis

text: Bremer et al. 5293 (S)

text: Sabicea marojejyensis sample CG080


text: DEEP, Stockholm University

text: public

text: Anthospermum thymoides sample DE070

text: Anthospermum thymoides

text: Anthospermum thymoides

text: Thureborn et al. 33 (S)

text: Anthospermum thymoides sample DE070


text: DEEP, Stockholm University

text: public

text: Coccocypselum condalia sample BA061

text: Coccocypselum condalia

text: Coccocypselum condalia

text: Persson, C. & Gustafsson, C. 246 (GB)

text: Coccocypselum condalia sample BA061


text: DEEP, Stockholm University

text: public

text: Rondeletia intermixta sample AG098

text: Rondeletia intermixta

text: Rondeletia intermixta

text: Rova et al. 2245 (GB)

text: Rondeletia intermixta sample AG098


text: DEEP, Stockholm University

text: public

text: Deppea grandiflora sample CC071

text: Deppea grandiflora

text: Deppea grandiflora

text: Marino Rosas R. 1015 (P)

text: Deppea grandiflora sample CC071


text: DEEP, Stockholm University

text: public

text: Cruckshanksia pumila sample DA042

text: Cruckshanksia pumila

text: Cruckshanksia pumila

text: Taylor et al. 10679 (MO)

text: Cruckshanksia pumila sample DA042


text: DEEP, Stockholm University

text: public

text: Opercularia volubilis sample CY089

text: Opercularia volubilis

text: Opercularia volubilis

text: B.J. Lepschi & B.A. Fuhrer BJL 3671 (P)

text: Opercularia volubilis sample CY089


text: DEEP, Stockholm University

text: public

text: Galium polyacanthum sample DE065

text: Galium polyacanthum

text: Galium polyacanthum

text: Thureborn et al. 32 (S)

text: Galium polyacanthum sample DE065


text: DEEP, Stockholm University

text: public

text: Payera decaryi sample DB077

text: Payera decaryi

text: Payera decaryi

text: Kr�ger & Razafimandimbison 74 (S)

text: Payera decaryi sample DB077


text: DEEP, Stockholm University

text: public

text: Acranthera grandiflora sample BD003

text: Acranthera grandiflora

text: Acranthera grandiflora

text: J. Klackenberg & R. Lundin 541 (S)

text: Acranthera grandiflora sample BD003


text: DEEP, Stockholm University

text: public

text: Triainolepis xerophila sample DE064

text: Triainolepis xerophila

text: Triainolepis xerophila

text: Thureborn et al. 11 (S)

text: Triainolepis xerophila sample DE064


text: DEEP, Stockholm University

text: public

text: Coprosma rhamnoides sample CY012

text: Coprosma rhamnoides

text: Coprosma rhamnoides

text: Tibell NZ46 (UPS)

text: Coprosma rhamnoides sample CY012


text: DEEP, Stockholm University

text: public

text: Lecananthus erubescens sample BZ091

text: Lecananthus erubescens

text: Lecananthus erubescens

text: Van Niel 3406 (L)

text: Lecananthus erubescens sample BZ091


text: DEEP, Stockholm University

text: public

text: Coptosapelta diffusa sample AY008

text: Coptosapelta diffusa

text: Coptosapelta diffusa

text: Steward et al 594 (S)

text: Coptosapelta diffusa sample AY008


text: DEEP, Stockholm University

text: public

text: Trichostachys microcarpa sample BE046

text: Trichostachys microcarpa

text: Trichostachys microcarpa

text: Masens 834 (BR)

text: Trichostachys microcarpa sample BE046


text: DEEP, Stockholm University

text: public

text: Pomax umbellata sample DE074

text: Pomax umbellata

text: Pomax umbellata

text: Halford Q9744 (BRI)

text: Pomax umbellata sample DE074


text: DEEP, Stockholm University

text: public

text: Leptodermis potaninii sample P0085

text: Leptodermis potaninii

text: Leptodermis potaninii

text: Andreasen 230 (UPS)

text: Leptodermis potaninii sample P0085


text: DEEP, Stockholm University

text: public

text: Wendlandia dasythyrsa sample BE034

text: Wendlandia dasythyrsa

text: Wendlandia dasythyrsa

text: Christensen, H. M. 460 (AAU)

text: Wendlandia dasythyrsa sample BE034


text: DEEP, Stockholm University

text: public

text: Molopanthera paniculata sample AV015

text: Molopanthera paniculata

text: Molopanthera paniculata

text: Williams & Assis 6861 (S)

text: Molopanthera paniculata sample AV015


text: DEEP, Stockholm University

text: public

text: Mouretia larsenii sample CH091

text: Mouretia larsenii

text: Mouretia larsenii

text: van Beusekom 4743 (P)

text: Mouretia larsenii sample CH091


text: DEEP, Stockholm University

text: public

text: Colletoecema dewevrei sample BD002b

text: Colletoecema dewevrei

text: Colletoecema dewevrei

text: Lisowski 47195 (K)

text: Colletoecema dewevrei sample BD002b


text: DEEP, Stockholm University

text: public

text: Oldenlandia herbacea sample DE079

text: Oldenlandia herbacea

text: Oldenlandia herbacea

text: Thureborn et al. 27 (S)

text: Oldenlandia herbacea sample DE079


text: DEEP, Stockholm University

text: public

text: Indian mulberry

text: Morinda citrifolia sample CV018

text: Morinda citrifolia

text: Morinda citrifolia

text: Razafimandimbison 1212a (S)

text: Morinda citrifolia sample CV018


text: DEEP, Stockholm University

text: public

text: Ixora javanica sample CX014

text: Ixora javanica

text: Ixora javanica

text: Puff 000512-1/2 (WU)

text: Ixora javanica sample CX014


text: DEEP, Stockholm University

text: public

text: Neurocalyx zeylanicus sample CH086

text: Neurocalyx zeylanicus

text: Neurocalyx zeylanicus

text: Bremer & Bremer 937 (S)

text: Neurocalyx zeylanicus sample CH086


text: DEEP, Stockholm University

text: public

text: Lasianthus sp. sample CQ058

text: unidentified

text: unidentified

text: Razafimandimbison et al. 718 (S)

text: Lasianthus sp. sample CQ058


text: DEEP, Stockholm University

text: public

text: Palicourea alpina sample BH070

text: Palicourea alpina

text: Palicourea alpina

text: Rova 2246 (GB)

text: Palicourea alpina sample BH070


text: DEEP, Stockholm University

text: public

text: Neohymenopogon parasiticus sample BK078

text: Neohymenopogon parasiticus

text: Neohymenopogon parasiticus

text: Bremer 2743 (UPS)

text: Neohymenopogon parasiticus sample BK078


text: DEEP, Stockholm University

text: public

text: Calycosia lageniformis sample CL028

text: Calycosia lageniformis

text: Calycosia lageniformis

text: Callmander et al. 962 (S)

text: Calycosia lageniformis sample CL028


text: DEEP, Stockholm University

text: public

text: Kelloggia galioides sample T0054b

text: Kelloggia galioides

text: Kelloggia galioides

text: Holmgren et al. 2437 (UPS)

text: Kelloggia galioides sample T0054b


text: DEEP, Stockholm University

text: public

text: Perama hirsuta sample AM028

text: Perama hirsuta

text: Perama hirsuta

text: Andersson et al. 1990 (GB)

text: Perama hirsuta sample AM028


text: DEEP, Stockholm University

text: public

text: Temnopteryx sericea sample AS084

text: Temnopteryx sericea

text: Temnopteryx sericea

text: Tabak 999 (WAG)

text: Temnopteryx sericea sample AS084


text: DEEP, Stockholm University

text: public

text: Clarkella nana sample BU095

text: Clarkella nana

text: Clarkella nana

text: Maxwell 02-252 (MO)

text: Clarkella nana sample BU095


text: DEEP, Stockholm University

text: public

text: Durringtonia paludosa sample DE081

text: Durringtonia paludosa

text: Durringtonia paludosa

text: Thompson 18m11 (BRI)

text: Durringtonia paludosa sample DE081


text: DEEP, Stockholm University

text: public

text: Galopina aspera sample CX098

text: Galopina aspera

text: Galopina aspera

text: Phillipson 1461 (UPS)

text: Galopina aspera sample CX098


text: DEEP, Stockholm University

text: public

text: Lerchea bracteata sample AX046

text: Lerchea bracteata

text: Lerchea bracteata

text: Axelius 343 (S)

text: Lerchea bracteata sample AX046


text: DEEP, Stockholm University

text: public

text: Schismatoclada marojejyensis sample DC094

text: Schismatoclada marojejyensis

text: Schismatoclada marojejyensis

text: Bremer et al. 5309 (S)


E-MTAB-11894:Sample 1

text: public

text: E-MTAB-11894:Sample 1

tag: Namespace:Ghent University Department of Pharmaceutical Sciences Laboratory of Pharmaceutical Sciences

text: ArrayExpress

characteristic: broker name

text: Protocols: Evolved bacterial lineages were grown in tryptic soy broth medium over night, pelleted, and immediately submitted to DNA extraction. Genomic DNA was extracted from 2 mL planktonic cultures. The pellet was resuspended in TE buffer (10 mM Tris-HCl pH 8 + 1 mM EDTA pH 8). 100 µL cell suspension was added to 500 µL lysis buffer (50 mM Tris-HCl pH 8, 70 mM EDTA pH 8, 1% sodium dodecyl sulfate) with 0.5 µg/mL pronase (Roche, Germany) containing acid-washed glass beads (Sigma-Aldrich, USA). After vortexing, the tubes were incubated at 37°C for 1 hour. 200 µL saturated ammonium acetate was added, vortexed, then 600 µL chloroform was added, and vortexed. After centrifuging for 5 minutes 400 µL of the top aqueous phase was transferred to a new tube containing 1 mL 100% ethanol. This was mixed by inversion and centrifuged for 5 minutes. The pellet was washed with 70% ethanol, and air-dried. The DNA was dissolved in low-EDTA-TE buffer (10 mM Tris-HCl pH 8 + 0.1 mM EDTA pH 8 + 0.5 µg/mL) containing RNase A (Qiagen, Germany), incubated at 37°C for 1 hour. NEBNext Ultra II library prep with 460-1000 ng input, according to the protocol with size selection using ampure XP beads after adapter ligation. PCR-free.

text: wild type genotype

characteristic: genotype

text: planktonic no antibiotics

characteristic: growth condition

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: whole organism

characteristic: organism part

text: Pseudomonas aeruginosa

characteristic: strain

text: Sample 1


E-MTAB-11894:Sample 17

characteristic: ENA-CHECKLIST

text: Ghent University Department of Pharmaceutical Sciences Laboratory of Pharmaceutical Sciences

text: public

text: E-MTAB-11894:Sample 17

text: ArrayExpress

characteristic: description

text: wild type genotype

text: planktonic no antibiotics

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa

text: Sample 17


E-MTAB-11894:Sample 18

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-11894:Sample 18

text: ArrayExpress

text: wild type genotype

text: biofilm no antibiotics

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa

text: Sample 18


E-MTAB-11894:Sample 19

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-11894:Sample 19

text: ArrayExpress

text: wild type genotype

text: biofilm no antibiotics

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa

text: Sample 19


E-MTAB-11894:Sample 2

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-11894:Sample 2

text: ArrayExpress

text: wild type genotype

text: biofilm no antibiotics

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa

text: Sample 2


E-MTAB-11894:Sample 20

text: public

text: E-MTAB-11894:Sample 20

text: ArrayExpress

text: wild type genotype

text: biofilm no antibiotics

text: Pseudomonas aeruginosa

characteristic: organism

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa

text: Sample 20

characteristic: title


E-MTAB-11894:Sample 21

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11894:Sample 21

text: ArrayExpress

text: wild type genotype

text: biofilm no antibiotics

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa

text: Sample 21


E-MTAB-11894:Sample 22

text: public

text: E-MTAB-11894:Sample 22

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: wild type genotype

text: biofilm tobramycin

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa

text: Sample 22


E-MTAB-11894:Sample 23

text: public

text: E-MTAB-11894:Sample 23

text: ArrayExpress

text: wild type genotype

characteristic: genotype

text: biofilm tobramycin

characteristic: growth condition

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa

text: Sample 23


E-MTAB-11894:Sample 24

text: public

text: E-MTAB-11894:Sample 24

text: ArrayExpress

text: wild type genotype

text: biofilm tobramycin

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: whole organism

characteristic: organism part

text: Pseudomonas aeruginosa

characteristic: strain

text: Sample 24


E-MTAB-11894:Sample 25

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-11894:Sample 25

text: ArrayExpress

characteristic: description

text: wild type genotype

text: biofilm tobramycin

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa

text: Sample 25


E-MTAB-11894:Sample 26

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-11894:Sample 26

text: ArrayExpress

text: wild type genotype

text: planktonic no antibiotics

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa

text: Sample 26


E-MTAB-11894:Sample 27

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-11894:Sample 27

text: ArrayExpress

text: wild type genotype

text: biofilm no antibiotics

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa

text: Sample 27


E-MTAB-11894:Sample 28

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-11894:Sample 28

text: ArrayExpress

text: wild type genotype

text: biofilm no antibiotics

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa

text: Sample 28


E-MTAB-11894:Sample 29

text: public

text: E-MTAB-11894:Sample 29

text: ArrayExpress

text: wild type genotype

text: biofilm no antibiotics

text: Pseudomonas aeruginosa

characteristic: organism

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa

text: Sample 29

characteristic: title


E-MTAB-11894:Sample 3

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11894:Sample 3

text: ArrayExpress

text: wild type genotype

text: biofilm no antibiotics

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa

text: Sample 3


E-MTAB-11894:Sample 30

text: public

text: E-MTAB-11894:Sample 30

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: wild type genotype

text: biofilm no antibiotics

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa

text: Sample 30


E-MTAB-11894:Sample 31

text: public

text: E-MTAB-11894:Sample 31

text: ArrayExpress

text: wild type genotype

characteristic: genotype

text: biofilm tobramycin

characteristic: growth condition

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa

text: Sample 31


E-MTAB-11894:Sample 32

text: public

text: E-MTAB-11894:Sample 32

text: ArrayExpress

text: wild type genotype

text: biofilm tobramycin

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: whole organism

characteristic: organism part

text: Pseudomonas aeruginosa

characteristic: strain

text: Sample 32


E-MTAB-11894:Sample 33

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-11894:Sample 33

text: ArrayExpress

characteristic: description

text: wild type genotype

text: biofilm tobramycin

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa

text: Sample 33


E-MTAB-11894:Sample 34

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-11894:Sample 34

text: ArrayExpress

text: wild type genotype

text: biofilm tobramycin

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa

text: Sample 34


E-MTAB-11894:Sample 35

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-11894:Sample 35

text: ArrayExpress

text: wild type genotype

text: planktonic no antibiotics

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa

text: Sample 35


E-MTAB-11894:Sample 36

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-11894:Sample 36

text: ArrayExpress

text: wild type genotype

text: biofilm no antibiotics

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa

text: Sample 36


E-MTAB-11894:Sample 37

text: public

text: E-MTAB-11894:Sample 37

text: ArrayExpress

text: wild type genotype

text: biofilm no antibiotics

text: Pseudomonas aeruginosa

characteristic: organism

text: Pseudomonas aeruginosa

text: whole organism

text: Pseudomonas aeruginosa

text: Sample 37

characteristic: title