characteristic: Aluminium porewater (10 cm depth) (µmol/L)

characteristic: Aluminium surface water (µmol/L)

characteristic: Ammonium porewater (10 cm depth) (µmol/L)

characteristic: Ammonium surface water (mg/L)

characteristic: Azolla filiculoides cover (%)

characteristic: Calcium porewater (10 cm depth) (µmol/L)

characteristic: Calcium surface water (µmol/L)

characteristic: Chara spp cover (%)

characteristic: Diffusive carbon dioxide emissions (mg/m2/d)

characteristic: Diffusive methane emissions (mg/m2/d)

text: Not Dredged

characteristic: Dredging treatment

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: Ebullitive methane emissions (mg/m2/d)

characteristic: External Id

characteristic: Filamentous algae cover (%)

characteristic: Floating algae beds cover (%)

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Iron porewater (10 cm depth) (µmol/L)

characteristic: Iron surface water (µmol/L)

text: LMB added

characteristic: LMB treatment

characteristic: Lemna spp cover (%)

characteristic: Magnesium porewater (10 cm depth) (µmol/L)

characteristic: Magnesium surface water (µmol/L)

characteristic: Manganese porewater (10 cm depth) (µmol/L)

characteristic: Manganese surface water (µmol/L)

characteristic: Methane porewater (10 cm depth) (mmol/L)

characteristic: Nitrate/nitrite surface water (mg/L)

characteristic: Organic matter content (%)

characteristic: P fractionation iron-bound P (mmol/L)

characteristic: P fractionation loosely available P (mmol/L)

characteristic: SRA accession

text: Sample from Radboud mesocosm nr 16 of top 1 cm of sediment, sampled on 17 June 2021, sequencing the bacterial 16S rRNA gene V4 region

text: Shallow lake

text: Sediment top 1 cm

text: Sediment

text: Netherlands

text: metagenome

text: metagenome

text: metagenome

text: sediment

text: Novaseq 6000

text: Radboud sediment bacterial 16S mesocosm 16

text: dnp


status: PUBLIC

unit: µmol/L

tag: attribute

characteristic: Aluminium porewater (10 cm depth) (µmol/L)

characteristic: Aluminium surface water (µmol/L)

characteristic: Ammonium porewater (10 cm depth) (µmol/L)

characteristic: Ammonium surface water (mg/L)

characteristic: Azolla filiculoides cover (%)

characteristic: Calcium porewater (10 cm depth) (µmol/L)

characteristic: Calcium surface water (µmol/L)

characteristic: Chara spp cover (%)

characteristic: Diffusive carbon dioxide emissions (mg/m2/d)

characteristic: Diffusive methane emissions (mg/m2/d)

text: Dredged

characteristic: Dredging treatment

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: Ebullitive methane emissions (mg/m2/d)

characteristic: External Id

characteristic: Filamentous algae cover (%)

characteristic: Floating algae beds cover (%)

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No LMB added

unit: mmol/L

characteristic: P fractionation total plant available P (mmol/L)

characteristic: Phosphate surface water (mg/L)

characteristic: Potamogeton crispus cover (%)

characteristic: Potassium porewater (10 cm depth) (µmol/L)

characteristic: Potassium surface water (µmol/L)

unit: µmol/h/g

characteristic: Potential methane production (µmol/h/g)

characteristic: Silicate porewater (10 cm depth) (µmol/L)

characteristic: Silicate surface water (µmol/L)

characteristic: Sodium porewater (10 cm depth) (µmol/L)

characteristic: Sulphur porewater (10 cm depth) (µmol/L)

characteristic: Total Phosporus porewater (10 cm depth) (µmol/L)

characteristic: archaeal 16S gene copy number (copies/mg)

text: Sample from Radboud mesocosm nr 1 of sediment layer 1-11 cm, sampled on 17 June 2021, sequencing the archaeal 16S rRNA gene V4-V5 region

text: Shallow lake

text: Sediment 1-11 cm

text: Sediment

text: Netherlands

characteristic: geographic location (country and/or sea)

text: metagenome

text: metagenome

text: Arch519F (CAGCCGCCGCGGTAA) and Arch915R (GTGCTCCCCCGCCAATTCCT)

text: metagenome

text: sediment

text: Novaseq 6000

text: Radboud sediment archaeal 16S mesocosm 1

text: ndp


characteristic: Aluminium porewater (10 cm depth) (µmol/L)

characteristic: Aluminium surface water (µmol/L)

characteristic: Ammonium porewater (10 cm depth) (µmol/L)

characteristic: Ammonium surface water (mg/L)

characteristic: Azolla filiculoides cover (%)

characteristic: Calcium porewater (10 cm depth) (µmol/L)

characteristic: Calcium surface water (µmol/L)

characteristic: Chara spp cover (%)

characteristic: Diffusive carbon dioxide emissions (mg/m2/d)

characteristic: Diffusive methane emissions (mg/m2/d)

text: Not Dredged

characteristic: Dredging treatment

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: Ebullitive methane emissions (mg/m2/d)

characteristic: External Id

characteristic: Filamentous algae cover (%)

text: RADBOUD UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Iron porewater (10 cm depth) (µmol/L)

characteristic: Iron surface water (µmol/L)

text: No LMB added

characteristic: LMB treatment

characteristic: Lemna spp cover (%)

characteristic: Magnesium porewater (10 cm depth) (µmol/L)

characteristic: Magnesium surface water (µmol/L)

characteristic: Manganese porewater (10 cm depth) (µmol/L)

characteristic: Manganese surface water (µmol/L)

characteristic: Methane porewater (10 cm depth) (mmol/L)

characteristic: Nitrate/nitrite surface water (mg/L)

characteristic: Organic matter content (%)

characteristic: P fractionation iron-bound P (mmol/L)

characteristic: P fractionation loosely available P (mmol/L)

characteristic: SRA accession

text: Sample from Radboud mesocosm nr 2 of sediment layer 1-11 cm, sampled on 17 June 2021, sequencing the archaeal 16S rRNA gene V4-V5 region

text: Shallow lake

text: Sediment 1-11 cm

text: Sediment

text: Netherlands

text: metagenome

text: metagenome

text: metagenome

text: sediment

text: Novaseq 6000

text: Radboud sediment archaeal 16S mesocosm 2

text: ndnp


characteristic: Aluminium porewater (10 cm depth) (µmol/L)

characteristic: Aluminium surface water (µmol/L)

characteristic: Ammonium porewater (10 cm depth) (µmol/L)

characteristic: Ammonium surface water (mg/L)

characteristic: Azolla filiculoides cover (%)

characteristic: Calcium porewater (10 cm depth) (µmol/L)

characteristic: Calcium surface water (µmol/L)

characteristic: Chara spp cover (%)

characteristic: Diffusive carbon dioxide emissions (mg/m2/d)

characteristic: Diffusive methane emissions (mg/m2/d)

text: Dredged

characteristic: Dredging treatment

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: Ebullitive methane emissions (mg/m2/d)

characteristic: External Id

characteristic: Filamentous algae cover (%)

characteristic: Floating algae beds cover (%)

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: LMB added

characteristic: P fractionation total plant available P (mmol/L)

characteristic: Phosphate surface water (mg/L)

characteristic: Potamogeton crispus cover (%)

characteristic: Potassium porewater (10 cm depth) (µmol/L)

characteristic: Potassium surface water (µmol/L)

characteristic: Potential methane production (µmol/h/g)

characteristic: Silicate porewater (10 cm depth) (µmol/L)

characteristic: Silicate surface water (µmol/L)

characteristic: Sodium porewater (10 cm depth) (µmol/L)

characteristic: Sulphur porewater (10 cm depth) (µmol/L)

characteristic: Total Phosporus porewater (10 cm depth) (µmol/L)

characteristic: archaeal 16S gene copy number (copies/mg)

text: Sample from Radboud mesocosm nr 3 of sediment layer 1-11 cm, sampled on 17 June 2021, sequencing the archaeal 16S rRNA gene V4-V5 region

text: Shallow lake

text: Sediment 1-11 cm

text: Sediment

text: Netherlands

characteristic: geographic location (country and/or sea)

text: metagenome

text: metagenome

text: metagenome

text: sediment

text: Novaseq 6000

text: Radboud sediment archaeal 16S mesocosm 3

text: dp


characteristic: Aluminium porewater (10 cm depth) (µmol/L)

characteristic: Aluminium surface water (µmol/L)

characteristic: Ammonium porewater (10 cm depth) (µmol/L)

characteristic: Ammonium surface water (mg/L)

characteristic: Azolla filiculoides cover (%)

characteristic: Calcium porewater (10 cm depth) (µmol/L)

characteristic: Calcium surface water (µmol/L)

characteristic: Chara spp cover (%)

characteristic: Diffusive carbon dioxide emissions (mg/m2/d)

characteristic: Diffusive methane emissions (mg/m2/d)

text: Not Dredged

characteristic: Dredging treatment

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: Ebullitive methane emissions (mg/m2/d)

characteristic: External Id

characteristic: Filamentous algae cover (%)

text: RADBOUD UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Iron porewater (10 cm depth) (µmol/L)

characteristic: Iron surface water (µmol/L)

text: LMB added

characteristic: LMB treatment

characteristic: Lemna spp cover (%)

characteristic: Magnesium porewater (10 cm depth) (µmol/L)

characteristic: Magnesium surface water (µmol/L)

characteristic: Manganese porewater (10 cm depth) (µmol/L)

characteristic: Manganese surface water (µmol/L)

characteristic: Methane porewater (10 cm depth) (mmol/L)

characteristic: Nitrate/nitrite surface water (mg/L)

characteristic: Organic matter content (%)

characteristic: P fractionation iron-bound P (mmol/L)

characteristic: P fractionation loosely available P (mmol/L)

characteristic: SRA accession

text: Sample from Radboud mesocosm nr 4 of sediment layer 1-11 cm, sampled on 17 June 2021, sequencing the archaeal 16S rRNA gene V4-V5 region

text: Shallow lake

text: Sediment 1-11 cm

text: Sediment

text: Netherlands

text: metagenome

text: metagenome

text: metagenome

text: sediment

text: Novaseq 6000

text: Radboud sediment archaeal 16S mesocosm 4

text: dnp


characteristic: Aluminium porewater (10 cm depth) (µmol/L)

characteristic: Aluminium surface water (µmol/L)

characteristic: Ammonium porewater (10 cm depth) (µmol/L)

characteristic: Ammonium surface water (mg/L)

characteristic: Azolla filiculoides cover (%)

characteristic: Calcium porewater (10 cm depth) (µmol/L)

characteristic: Calcium surface water (µmol/L)

characteristic: Chara spp cover (%)

characteristic: Diffusive carbon dioxide emissions (mg/m2/d)

characteristic: Diffusive methane emissions (mg/m2/d)

text: Not Dredged

characteristic: Dredging treatment

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: Ebullitive methane emissions (mg/m2/d)

characteristic: External Id

characteristic: Filamentous algae cover (%)

characteristic: Floating algae beds cover (%)

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: LMB added

characteristic: P fractionation total plant available P (mmol/L)

characteristic: Phosphate surface water (mg/L)

characteristic: Potamogeton crispus cover (%)

characteristic: Potassium porewater (10 cm depth) (µmol/L)

characteristic: Potassium surface water (µmol/L)

characteristic: Potential methane production (µmol/h/g)

characteristic: Silicate porewater (10 cm depth) (µmol/L)

characteristic: Silicate surface water (µmol/L)

characteristic: Sodium porewater (10 cm depth) (µmol/L)

characteristic: Sulphur porewater (10 cm depth) (µmol/L)

characteristic: Total Phosporus porewater (10 cm depth) (µmol/L)

characteristic: archaeal 16S gene copy number (copies/mg)

text: Sample from Radboud mesocosm nr 5 of sediment layer 1-11 cm, sampled on 17 June 2021, sequencing the archaeal 16S rRNA gene V4-V5 region

text: Shallow lake

text: Sediment 1-11 cm

text: Sediment

text: Netherlands

characteristic: geographic location (country and/or sea)

text: metagenome

text: metagenome

text: metagenome

text: sediment

text: Novaseq 6000

text: Radboud sediment archaeal 16S mesocosm 5

text: dnp


characteristic: Aluminium porewater (10 cm depth) (µmol/L)

characteristic: Aluminium surface water (µmol/L)

characteristic: Ammonium porewater (10 cm depth) (µmol/L)

characteristic: Ammonium surface water (mg/L)

characteristic: Azolla filiculoides cover (%)

characteristic: Calcium porewater (10 cm depth) (µmol/L)

characteristic: Calcium surface water (µmol/L)

characteristic: Chara spp cover (%)

characteristic: Diffusive carbon dioxide emissions (mg/m2/d)

characteristic: Diffusive methane emissions (mg/m2/d)

text: Dredged

characteristic: Dredging treatment

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: Ebullitive methane emissions (mg/m2/d)

characteristic: External Id

characteristic: Filamentous algae cover (%)

text: RADBOUD UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Iron porewater (10 cm depth) (µmol/L)

characteristic: Iron surface water (µmol/L)

text: LMB added

characteristic: LMB treatment

characteristic: Lemna spp cover (%)

characteristic: Magnesium porewater (10 cm depth) (µmol/L)

characteristic: Magnesium surface water (µmol/L)

characteristic: Manganese porewater (10 cm depth) (µmol/L)

characteristic: Manganese surface water (µmol/L)

characteristic: Methane porewater (10 cm depth) (mmol/L)

characteristic: Nitrate/nitrite surface water (mg/L)

characteristic: Organic matter content (%)

characteristic: P fractionation iron-bound P (mmol/L)

characteristic: P fractionation loosely available P (mmol/L)

characteristic: SRA accession

text: Sample from Radboud mesocosm nr 6 of sediment layer 1-11 cm, sampled on 17 June 2021, sequencing the archaeal 16S rRNA gene V4-V5 region

text: Shallow lake

text: Sediment 1-11 cm

text: Sediment

text: Netherlands

text: metagenome

text: metagenome

text: metagenome

text: sediment

text: Novaseq 6000

text: Radboud sediment archaeal 16S mesocosm 6

text: dp


characteristic: Aluminium porewater (10 cm depth) (µmol/L)

characteristic: Aluminium surface water (µmol/L)

characteristic: Ammonium porewater (10 cm depth) (µmol/L)

characteristic: Ammonium surface water (mg/L)

characteristic: Azolla filiculoides cover (%)

characteristic: Calcium porewater (10 cm depth) (µmol/L)

characteristic: Calcium surface water (µmol/L)

characteristic: Chara spp cover (%)

characteristic: Diffusive carbon dioxide emissions (mg/m2/d)

characteristic: Diffusive methane emissions (mg/m2/d)

text: Dredged

characteristic: Dredging treatment

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: Ebullitive methane emissions (mg/m2/d)

characteristic: External Id

characteristic: Filamentous algae cover (%)

characteristic: Floating algae beds cover (%)

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No LMB added

characteristic: P fractionation total plant available P (mmol/L)

characteristic: Phosphate surface water (mg/L)

characteristic: Potamogeton crispus cover (%)

characteristic: Potassium porewater (10 cm depth) (µmol/L)

characteristic: Potassium surface water (µmol/L)

characteristic: Potential methane production (µmol/h/g)

characteristic: Silicate porewater (10 cm depth) (µmol/L)

characteristic: Silicate surface water (µmol/L)

characteristic: Sodium porewater (10 cm depth) (µmol/L)

characteristic: Sulphur porewater (10 cm depth) (µmol/L)

characteristic: Total Phosporus porewater (10 cm depth) (µmol/L)

characteristic: archaeal 16S gene copy number (copies/mg)

text: Sample from Radboud mesocosm nr 7 of sediment layer 1-11 cm, sampled on 17 June 2021, sequencing the archaeal 16S rRNA gene V4-V5 region

text: Shallow lake

text: Sediment 1-11 cm

text: Sediment

text: Netherlands

characteristic: geographic location (country and/or sea)

text: metagenome

text: metagenome

text: metagenome

text: sediment

text: Novaseq 6000

text: Radboud sediment archaeal 16S mesocosm 7

text: ndp


characteristic: Aluminium porewater (10 cm depth) (µmol/L)

characteristic: Aluminium surface water (µmol/L)

characteristic: Ammonium porewater (10 cm depth) (µmol/L)

characteristic: Ammonium surface water (mg/L)

characteristic: Azolla filiculoides cover (%)

characteristic: Calcium porewater (10 cm depth) (µmol/L)

characteristic: Calcium surface water (µmol/L)

characteristic: Chara spp cover (%)

characteristic: Diffusive carbon dioxide emissions (mg/m2/d)

characteristic: Diffusive methane emissions (mg/m2/d)

text: Dredged

characteristic: Dredging treatment

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: Ebullitive methane emissions (mg/m2/d)

characteristic: External Id

characteristic: Filamentous algae cover (%)

text: RADBOUD UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Iron porewater (10 cm depth) (µmol/L)

characteristic: Iron surface water (µmol/L)

text: LMB added

characteristic: LMB treatment

characteristic: Lemna spp cover (%)

characteristic: Magnesium porewater (10 cm depth) (µmol/L)

characteristic: Magnesium surface water (µmol/L)

characteristic: Manganese porewater (10 cm depth) (µmol/L)

characteristic: Manganese surface water (µmol/L)

characteristic: Methane porewater (10 cm depth) (mmol/L)

characteristic: Nitrate/nitrite surface water (mg/L)

characteristic: Organic matter content (%)

characteristic: P fractionation iron-bound P (mmol/L)

characteristic: P fractionation loosely available P (mmol/L)

characteristic: SRA accession

text: Sample from Radboud mesocosm nr 8 of sediment layer 1-11 cm, sampled on 17 June 2021, sequencing the archaeal 16S rRNA gene V4-V5 region

text: Shallow lake

text: Sediment 1-11 cm

text: Sediment

text: Netherlands

text: metagenome

text: metagenome

text: metagenome

text: sediment

text: Novaseq 6000

text: Radboud sediment archaeal 16S mesocosm 8

text: dp


characteristic: Aluminium porewater (10 cm depth) (µmol/L)

characteristic: Aluminium surface water (µmol/L)

characteristic: Ammonium porewater (10 cm depth) (µmol/L)

characteristic: Ammonium surface water (mg/L)

characteristic: Azolla filiculoides cover (%)

characteristic: Calcium porewater (10 cm depth) (µmol/L)

characteristic: Calcium surface water (µmol/L)

characteristic: Chara spp cover (%)

characteristic: Diffusive carbon dioxide emissions (mg/m2/d)

characteristic: Diffusive methane emissions (mg/m2/d)

text: Dredged

characteristic: Dredging treatment

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: Ebullitive methane emissions (mg/m2/d)

characteristic: External Id

characteristic: Filamentous algae cover (%)

characteristic: Floating algae beds cover (%)

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: LMB added

characteristic: P fractionation total plant available P (mmol/L)

characteristic: Phosphate surface water (mg/L)

characteristic: Potamogeton crispus cover (%)

characteristic: Potassium porewater (10 cm depth) (µmol/L)

characteristic: Potassium surface water (µmol/L)

characteristic: Potential methane production (µmol/h/g)

characteristic: Silicate porewater (10 cm depth) (µmol/L)

characteristic: Silicate surface water (µmol/L)

characteristic: Sodium porewater (10 cm depth) (µmol/L)

characteristic: Sulphur porewater (10 cm depth) (µmol/L)

characteristic: Total Phosporus porewater (10 cm depth) (µmol/L)

characteristic: archaeal 16S gene copy number (copies/mg)

text: Sample from Radboud mesocosm nr 9 of sediment layer 1-11 cm, sampled on 17 June 2021, sequencing the archaeal 16S rRNA gene V4-V5 region

text: Shallow lake

text: Sediment 1-11 cm

text: Sediment

text: Netherlands

characteristic: geographic location (country and/or sea)

text: metagenome

text: metagenome

text: metagenome

text: sediment

text: Novaseq 6000

text: Radboud sediment archaeal 16S mesocosm 9

text: dp


characteristic: Aluminium porewater (10 cm depth) (µmol/L)

characteristic: Aluminium surface water (µmol/L)

characteristic: Ammonium porewater (10 cm depth) (µmol/L)

characteristic: Ammonium surface water (mg/L)

characteristic: Azolla filiculoides cover (%)

characteristic: Calcium porewater (10 cm depth) (µmol/L)

characteristic: Calcium surface water (µmol/L)

characteristic: Chara spp cover (%)

characteristic: Diffusive carbon dioxide emissions (mg/m2/d)

characteristic: Diffusive methane emissions (mg/m2/d)

text: Not Dredged

characteristic: Dredging treatment

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: Ebullitive methane emissions (mg/m2/d)

characteristic: External Id

characteristic: Filamentous algae cover (%)

text: RADBOUD UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Iron porewater (10 cm depth) (µmol/L)

characteristic: Iron surface water (µmol/L)

text: No LMB added

characteristic: LMB treatment

characteristic: Lemna spp cover (%)

characteristic: Magnesium porewater (10 cm depth) (µmol/L)

characteristic: Magnesium surface water (µmol/L)

characteristic: Manganese porewater (10 cm depth) (µmol/L)

characteristic: Manganese surface water (µmol/L)

characteristic: Methane porewater (10 cm depth) (mmol/L)

characteristic: Nitrate/nitrite surface water (mg/L)

characteristic: Organic matter content (%)

characteristic: P fractionation iron-bound P (mmol/L)

characteristic: P fractionation loosely available P (mmol/L)

characteristic: SRA accession

text: Sample from Radboud mesocosm nr 10 of sediment layer 1-11 cm, sampled on 17 June 2021, sequencing the archaeal 16S rRNA gene V4-V5 region

text: Shallow lake

text: Sediment 1-11 cm

text: Sediment

text: Netherlands

text: metagenome

text: metagenome

text: Arch519F (CAGCCGCCGCGGTAA) and Arch915R (GTGCTCCCCCGCCAATTCCT)

text: metagenome

text: sediment

text: Novaseq 6000

text: Radboud sediment archaeal 16S mesocosm 10

text: ndnp


characteristic: Aluminium porewater (10 cm depth) (µmol/L)

characteristic: Aluminium surface water (µmol/L)

characteristic: Ammonium porewater (10 cm depth) (µmol/L)

characteristic: Ammonium surface water (mg/L)

characteristic: Azolla filiculoides cover (%)

characteristic: Calcium porewater (10 cm depth) (µmol/L)

characteristic: Calcium surface water (µmol/L)

characteristic: Chara spp cover (%)

characteristic: Diffusive carbon dioxide emissions (mg/m2/d)

characteristic: Diffusive methane emissions (mg/m2/d)

text: Not Dredged

characteristic: Dredging treatment

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: Ebullitive methane emissions (mg/m2/d)

characteristic: External Id

characteristic: Filamentous algae cover (%)

characteristic: Floating algae beds cover (%)

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: LMB added

characteristic: P fractionation total plant available P (mmol/L)

characteristic: Phosphate surface water (mg/L)

characteristic: Potamogeton crispus cover (%)

characteristic: Potassium porewater (10 cm depth) (µmol/L)

characteristic: Potassium surface water (µmol/L)

characteristic: Potential methane production (µmol/h/g)

characteristic: Silicate porewater (10 cm depth) (µmol/L)

characteristic: Silicate surface water (µmol/L)

characteristic: Sodium porewater (10 cm depth) (µmol/L)

characteristic: Sulphur porewater (10 cm depth) (µmol/L)

characteristic: Total Phosporus porewater (10 cm depth) (µmol/L)

characteristic: archaeal 16S gene copy number (copies/mg)

text: Sample from Radboud mesocosm nr 11 of sediment layer 1-11 cm, sampled on 17 June 2021, sequencing the archaeal 16S rRNA gene V4-V5 region

text: Shallow lake

text: Sediment 1-11 cm

text: Sediment

text: Netherlands

characteristic: geographic location (country and/or sea)

text: metagenome

text: metagenome

text: metagenome

text: sediment

text: Novaseq 6000

text: Radboud sediment archaeal 16S mesocosm 11

text: dnp


characteristic: Aluminium porewater (10 cm depth) (µmol/L)

characteristic: Aluminium surface water (µmol/L)

characteristic: Ammonium porewater (10 cm depth) (µmol/L)

characteristic: Ammonium surface water (mg/L)

characteristic: Azolla filiculoides cover (%)

characteristic: Calcium porewater (10 cm depth) (µmol/L)

characteristic: Calcium surface water (µmol/L)

characteristic: Chara spp cover (%)

characteristic: Diffusive carbon dioxide emissions (mg/m2/d)

characteristic: Diffusive methane emissions (mg/m2/d)

text: Dredged

characteristic: Dredging treatment

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: Ebullitive methane emissions (mg/m2/d)

characteristic: External Id

characteristic: Filamentous algae cover (%)

text: RADBOUD UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Iron porewater (10 cm depth) (µmol/L)

characteristic: Iron surface water (µmol/L)

text: No LMB added

characteristic: LMB treatment

characteristic: Lemna spp cover (%)

characteristic: Magnesium porewater (10 cm depth) (µmol/L)

characteristic: Magnesium surface water (µmol/L)

characteristic: Manganese porewater (10 cm depth) (µmol/L)

characteristic: Manganese surface water (µmol/L)

characteristic: Methane porewater (10 cm depth) (mmol/L)

characteristic: Nitrate/nitrite surface water (mg/L)

characteristic: Organic matter content (%)

characteristic: P fractionation iron-bound P (mmol/L)

characteristic: P fractionation loosely available P (mmol/L)

characteristic: SRA accession

text: Sample from Radboud mesocosm nr 12 of sediment layer 1-11 cm, sampled on 17 June 2021, sequencing the archaeal 16S rRNA gene V4-V5 region

text: Shallow lake

text: Sediment 1-11 cm

text: Sediment

text: Netherlands

text: metagenome

text: metagenome

text: metagenome

text: sediment

text: Novaseq 6000

text: Radboud sediment archaeal 16S mesocosm 12

text: ndp


characteristic: Aluminium porewater (10 cm depth) (µmol/L)

characteristic: Aluminium surface water (µmol/L)

characteristic: Ammonium porewater (10 cm depth) (µmol/L)

characteristic: Ammonium surface water (mg/L)

characteristic: Azolla filiculoides cover (%)

characteristic: Calcium porewater (10 cm depth) (µmol/L)

characteristic: Calcium surface water (µmol/L)

characteristic: Chara spp cover (%)

characteristic: Diffusive carbon dioxide emissions (mg/m2/d)

characteristic: Diffusive methane emissions (mg/m2/d)

text: Not Dredged

characteristic: Dredging treatment

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: Ebullitive methane emissions (mg/m2/d)

characteristic: External Id

characteristic: Filamentous algae cover (%)

characteristic: Floating algae beds cover (%)

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No LMB added

characteristic: P fractionation total plant available P (mmol/L)

characteristic: Phosphate surface water (mg/L)

characteristic: Potamogeton crispus cover (%)

characteristic: Potassium porewater (10 cm depth) (µmol/L)

characteristic: Potassium surface water (µmol/L)

characteristic: Potential methane production (µmol/h/g)

characteristic: Silicate porewater (10 cm depth) (µmol/L)

characteristic: Silicate surface water (µmol/L)

characteristic: Sodium porewater (10 cm depth) (µmol/L)

characteristic: Sulphur porewater (10 cm depth) (µmol/L)

characteristic: Total Phosporus porewater (10 cm depth) (µmol/L)

characteristic: archaeal 16S gene copy number (copies/mg)

text: Sample from Radboud mesocosm nr 13 of sediment layer 1-11 cm, sampled on 17 June 2021, sequencing the archaeal 16S rRNA gene V4-V5 region

text: Shallow lake

text: Sediment 1-11 cm

text: Sediment

text: Netherlands

characteristic: geographic location (country and/or sea)

text: metagenome

text: metagenome

text: metagenome

text: sediment

text: Novaseq 6000

text: Radboud sediment archaeal 16S mesocosm 13

text: ndnp


characteristic: Aluminium porewater (10 cm depth) (µmol/L)

characteristic: Aluminium surface water (µmol/L)

characteristic: Ammonium porewater (10 cm depth) (µmol/L)

characteristic: Ammonium surface water (mg/L)

characteristic: Azolla filiculoides cover (%)

characteristic: Calcium porewater (10 cm depth) (µmol/L)

characteristic: Calcium surface water (µmol/L)

characteristic: Chara spp cover (%)

characteristic: Diffusive carbon dioxide emissions (mg/m2/d)

characteristic: Diffusive methane emissions (mg/m2/d)

text: Dredged

characteristic: Dredging treatment

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: Ebullitive methane emissions (mg/m2/d)

characteristic: External Id

characteristic: Filamentous algae cover (%)

text: RADBOUD UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Iron porewater (10 cm depth) (µmol/L)

characteristic: Iron surface water (µmol/L)

text: No LMB added

characteristic: LMB treatment

characteristic: Lemna spp cover (%)

characteristic: Magnesium porewater (10 cm depth) (µmol/L)

characteristic: Magnesium surface water (µmol/L)

characteristic: Manganese porewater (10 cm depth) (µmol/L)

characteristic: Manganese surface water (µmol/L)

characteristic: Methane porewater (10 cm depth) (mmol/L)

characteristic: Nitrate/nitrite surface water (mg/L)

characteristic: Organic matter content (%)

characteristic: P fractionation iron-bound P (mmol/L)

characteristic: P fractionation loosely available P (mmol/L)

characteristic: SRA accession

text: Sample from Radboud mesocosm nr 14 of sediment layer 1-11 cm, sampled on 17 June 2021, sequencing the archaeal 16S rRNA gene V4-V5 region

text: Shallow lake

text: Sediment 1-11 cm

text: Sediment

text: Netherlands

text: metagenome

text: metagenome

text: metagenome

text: sediment

text: Novaseq 6000

text: Radboud sediment archaeal 16S mesocosm 14

text: ndp


characteristic: Aluminium porewater (10 cm depth) (µmol/L)

characteristic: Aluminium surface water (µmol/L)

characteristic: Ammonium porewater (10 cm depth) (µmol/L)

characteristic: Ammonium surface water (mg/L)

characteristic: Azolla filiculoides cover (%)

characteristic: Calcium porewater (10 cm depth) (µmol/L)

characteristic: Calcium surface water (µmol/L)

characteristic: Chara spp cover (%)

characteristic: Diffusive carbon dioxide emissions (mg/m2/d)

characteristic: Diffusive methane emissions (mg/m2/d)

text: Not Dredged

characteristic: Dredging treatment

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: Ebullitive methane emissions (mg/m2/d)

characteristic: External Id

characteristic: Filamentous algae cover (%)

characteristic: Floating algae beds cover (%)

text: RADBOUD UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No LMB added

characteristic: P fractionation total plant available P (mmol/L)

characteristic: Phosphate surface water (mg/L)

characteristic: Potamogeton crispus cover (%)

characteristic: Potassium porewater (10 cm depth) (µmol/L)

characteristic: Potassium surface water (µmol/L)

characteristic: Potential methane production (µmol/h/g)

characteristic: Silicate porewater (10 cm depth) (µmol/L)

characteristic: Silicate surface water (µmol/L)

characteristic: Sodium porewater (10 cm depth) (µmol/L)

characteristic: Sulphur porewater (10 cm depth) (µmol/L)

characteristic: Total Phosporus porewater (10 cm depth) (µmol/L)

characteristic: archaeal 16S gene copy number (copies/mg)

text: Sample from Radboud mesocosm nr 15 of sediment layer 1-11 cm, sampled on 17 June 2021, sequencing the archaeal 16S rRNA gene V4-V5 region

text: Shallow lake

text: Sediment 1-11 cm

text: Sediment

text: Netherlands

characteristic: geographic location (country and/or sea)

text: metagenome

text: metagenome

text: metagenome

text: sediment

text: Novaseq 6000

text: Radboud sediment archaeal 16S mesocosm 15

text: ndnp


characteristic: Aluminium porewater (10 cm depth) (µmol/L)

characteristic: Aluminium surface water (µmol/L)

characteristic: Ammonium porewater (10 cm depth) (µmol/L)

characteristic: Ammonium surface water (mg/L)

characteristic: Azolla filiculoides cover (%)

characteristic: Calcium porewater (10 cm depth) (µmol/L)

characteristic: Calcium surface water (µmol/L)

characteristic: Chara spp cover (%)

characteristic: Diffusive carbon dioxide emissions (mg/m2/d)

characteristic: Diffusive methane emissions (mg/m2/d)

text: Not Dredged

characteristic: Dredging treatment

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: Ebullitive methane emissions (mg/m2/d)

characteristic: External Id

characteristic: Filamentous algae cover (%)

text: RADBOUD UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Iron porewater (10 cm depth) (µmol/L)

characteristic: Iron surface water (µmol/L)

text: LMB added

characteristic: LMB treatment

characteristic: Lemna spp cover (%)

characteristic: Magnesium porewater (10 cm depth) (µmol/L)

characteristic: Magnesium surface water (µmol/L)

characteristic: Manganese porewater (10 cm depth) (µmol/L)

characteristic: Manganese surface water (µmol/L)

characteristic: Methane porewater (10 cm depth) (mmol/L)

characteristic: Nitrate/nitrite surface water (mg/L)

characteristic: Organic matter content (%)

characteristic: P fractionation iron-bound P (mmol/L)

characteristic: P fractionation loosely available P (mmol/L)

characteristic: SRA accession

text: Sample from Radboud mesocosm nr 16 of sediment layer 1-11 cm, sampled on 17 June 2021, sequencing the archaeal 16S rRNA gene V4-V5 region

text: Shallow lake

text: Sediment 1-11 cm

text: Sediment

text: Netherlands

text: metagenome

text: metagenome

text: metagenome

text: sediment

text: Novaseq 6000

text: Radboud sediment archaeal 16S mesocosm 16

text: dnp


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF HELSINKI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:UNIVERSITY OF HELSINKI

characteristic: Submitter Id

text: ninespine stickleback

characteristic: common name

text: nine-spined stickleback

characteristic: description

text: Finland

characteristic: geographic location (country and/or sea)

text: Baltic Sea

characteristic: geographic location (region and locality)

text: marine

characteristic: isolation source

text: 60.202, 25.182

characteristic: lat lon

text: Pungitius pungitius

characteristic: organism

text: Pungitius pungitius

text: Whole-genome sequencing of wild nine-spined sticklebacks

characteristic: title


text: UNIVERSITY OF HELSINKI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ninespine stickleback

text: nine-spined stickleback

text: Finland

text: Baltic Sea

text: marine

text: 60.202, 25.183

text: Pungitius pungitius

text: Pungitius pungitius


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF HELSINKI

text: public

characteristic: SRA accession

text: ninespine stickleback

text: nine-spined stickleback

text: Finland

text: Baltic Sea

text: marine

text: 60.202, 25.184

text: Pungitius pungitius

text: Pungitius pungitius


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF HELSINKI

text: public

text: ninespine stickleback

text: nine-spined stickleback

text: Finland

text: Baltic Sea

text: marine

text: 60.202, 25.185

text: Pungitius pungitius

text: Pungitius pungitius


characteristic: External Id

text: UNIVERSITY OF HELSINKI

characteristic: INSDC center name

text: public

text: ninespine stickleback

text: nine-spined stickleback

text: Finland

text: Baltic Sea

text: marine

text: 60.202, 25.186

text: Pungitius pungitius

text: Pungitius pungitius


text: UNIVERSITY OF HELSINKI

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: ninespine stickleback

text: nine-spined stickleback

text: Finland

text: Baltic Sea

text: marine

text: 60.202, 25.187

text: Pungitius pungitius

text: Pungitius pungitius


text: UNIVERSITY OF HELSINKI

text: public

text: ninespine stickleback

characteristic: common name

text: nine-spined stickleback

characteristic: description

text: Finland

text: Baltic Sea

text: marine

text: 60.202, 25.188

text: Pungitius pungitius

text: Pungitius pungitius


text: UNIVERSITY OF HELSINKI

text: public

text: ninespine stickleback

text: nine-spined stickleback

text: Finland

characteristic: geographic location (country and/or sea)

text: Baltic Sea

characteristic: geographic location (region and locality)

text: marine

text: 60.202, 25.189

text: Pungitius pungitius

text: Pungitius pungitius


text: UNIVERSITY OF HELSINKI

text: public

text: ninespine stickleback

text: nine-spined stickleback

text: Finland

text: Baltic Sea

text: marine

characteristic: isolation source

text: 60.202, 25.190

characteristic: lat lon

text: Pungitius pungitius

text: Pungitius pungitius


text: UNIVERSITY OF HELSINKI

text: public

text: ninespine stickleback

text: nine-spined stickleback

text: Finland

text: Baltic Sea

text: marine

text: 60.202, 25.191

text: Pungitius pungitius

characteristic: organism

text: Pungitius pungitius

characteristic: title


text: UNIVERSITY OF HELSINKI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ninespine stickleback

text: nine-spined stickleback

text: Finland

text: Baltic Sea

text: marine

text: 60.202, 25.192

text: Pungitius pungitius

text: Pungitius pungitius


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF HELSINKI

text: public

characteristic: SRA accession

text: ninespine stickleback

text: nine-spined stickleback

text: Finland

text: Baltic Sea

text: marine

text: 60.202, 25.193

text: Pungitius pungitius

text: Pungitius pungitius


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF HELSINKI

text: public

text: ninespine stickleback

text: nine-spined stickleback

text: Finland

text: Baltic Sea

text: marine

text: 60.202, 25.194

text: Pungitius pungitius

text: Pungitius pungitius


characteristic: External Id

text: UNIVERSITY OF HELSINKI

characteristic: INSDC center name

text: public

text: ninespine stickleback

text: nine-spined stickleback

text: Finland

text: Baltic Sea

text: marine

text: 60.202, 25.195

text: Pungitius pungitius

text: Pungitius pungitius


text: UNIVERSITY OF HELSINKI

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: ninespine stickleback

text: nine-spined stickleback

text: Finland

text: Baltic Sea

text: marine

text: 60.202, 25.196

text: Pungitius pungitius

text: Pungitius pungitius


text: UNIVERSITY OF HELSINKI

text: public

text: ninespine stickleback

characteristic: common name

text: nine-spined stickleback

characteristic: description

text: Finland

text: Baltic Sea

text: marine

text: 60.202, 25.197

text: Pungitius pungitius

text: Pungitius pungitius


text: UNIVERSITY OF HELSINKI

text: public

text: ninespine stickleback

text: nine-spined stickleback

text: Finland

characteristic: geographic location (country and/or sea)

text: Baltic Sea

characteristic: geographic location (region and locality)

text: marine

text: 60.202, 25.198

text: Pungitius pungitius

text: Pungitius pungitius


text: UNIVERSITY OF HELSINKI

text: public

text: ninespine stickleback

text: nine-spined stickleback

text: Finland

text: Baltic Sea

text: marine

characteristic: isolation source

text: 60.202, 25.199

characteristic: lat lon

text: Pungitius pungitius

text: Pungitius pungitius


text: UNIVERSITY OF HELSINKI

text: public

text: ninespine stickleback

text: nine-spined stickleback

text: Finland

text: Baltic Sea

text: marine

text: 60.202, 25.200

text: Pungitius pungitius

characteristic: organism

text: Pungitius pungitius

characteristic: title


text: UNIVERSITY OF HELSINKI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ninespine stickleback

text: nine-spined stickleback

text: Finland

text: Baltic Sea

text: marine

text: 60.202, 25.201

text: Pungitius pungitius

text: Pungitius pungitius


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF HELSINKI

text: public

characteristic: SRA accession

text: ninespine stickleback

text: nine-spined stickleback

text: Finland

text: Baltic Sea

text: marine

text: 60.202, 25.202

text: Pungitius pungitius

text: Pungitius pungitius


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF HELSINKI

text: public

text: ninespine stickleback

text: nine-spined stickleback

text: Finland

text: Baltic Sea

text: marine

text: 60.202, 25.203

text: Pungitius pungitius

text: Pungitius pungitius


characteristic: External Id

text: UNIVERSITY OF HELSINKI

characteristic: INSDC center name

text: public

text: ninespine stickleback

text: nine-spined stickleback

text: Finland

text: Rytilampi

text: pond

text: 66.384, 29.320

text: Pungitius pungitius

text: Pungitius pungitius


text: UNIVERSITY OF HELSINKI

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: ninespine stickleback

text: nine-spined stickleback

text: Sweden

text: Baltic Sea

text: pond

text: 55.716, 13.439

text: Pungitius pungitius

text: Pungitius pungitius


characteristic: GISAID Accession ID

text: public

tag: Namespace:Institute for Infectious Diseases, Bern, Switzerland

text: SIB

characteristic: broker name

text: Spital Tiefenau; Bern, Switzerland

characteristic: collecting institution

characteristic: collection date

text: Stefan Neuenschwander, Christian Baumann, Miguel A Terrazos Miani, Sonja Gempeler, Loïc Borcard, Lea Stauber, Cora Sägesser, Pascal Bittel, Peter Keller, Franziska Suter-Riniker, Stephen L Leib, Alban Ramette

characteristic: collector name

text: Switzerland

text: BE

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-220718_os_80/2022

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Center for Neuropathology, LMU Munich

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Center for Neuropathology, LMU Munich

text: human

characteristic: common name

text: snap-frozen sample of the medial frontal gyrus

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Male

characteristic: sex

text: cerebral cortex + appending white matter, hg38 aligned

characteristic: tissue type

text: PSP case 1

characteristic: title


characteristic: External Id

text: Center for Neuropathology, LMU Munich

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: human

text: Homo sapiens

text: Homo sapiens

text: Female

text: cerebral cortex + appending white matte, hg38 alignedr

text: PSP case 2


text: Center for Neuropathology, LMU Munich

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Male

text: PSP case 3


text: Center for Neuropathology, LMU Munich

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Female

text: PSP case 4


text: Center for Neuropathology, LMU Munich

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Female

text: CBD case 1


text: Center for Neuropathology, LMU Munich

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Male

text: CBD case 2


text: Center for Neuropathology, LMU Munich

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Female

text: CBD case 3


text: Center for Neuropathology, LMU Munich

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Male

text: CBD case 4


text: Center for Neuropathology, LMU Munich

text: public

text: human

text: snap-frozen sample of the superior frontal gyrus

text: Homo sapiens

text: Homo sapiens

text: Male

text: control case 1


text: Center for Neuropathology, LMU Munich

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Male

text: cerebral cortex + appending white matter

text: control case 2


text: Center for Neuropathology, LMU Munich

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Female

text: control case 3


text: Center for Neuropathology, LMU Munich

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Female

text: control case 4


text: Center for Neuropathology, LMU Munich

text: public

text: human

text: Homo sapiens

text: Homo sapiens

text: Male

text: control case 5


text: Clinical Microbiomics

text: public

tag: Namespace:Clinical Microbiomics

characteristic: collection date

text: Effects of 2-fucosyllactose (2FL) on the infant microbiome. Cohorts consists of breastfed and formula fed infants

text: human

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Test Formula

characteristic: host diet

text: female

characteristic: host sex

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human feces metagenome

text: Shotgun metagenomics of infant formula study

characteristic: project name

text: human feces metagenome

text: Illumina

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Microbiomics

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: description

text: human

text: gut

text: stool

text: USA

text: not collected

text: not collected

text: Control Formula

text: male

text: human-gut

text: metagenome

text: human feces metagenome

characteristic: organism

text: human feces metagenome

text: Illumina

characteristic: title


text: Clinical Microbiomics

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

characteristic: collection date

text: human

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Test Formula

text: male

text: human-gut

text: metagenome

text: human feces metagenome

text: human feces metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Microbiomics

text: public

text: human

text: gut

text: stool

text: USA

text: not collected

text: not collected

text: Control Formula

characteristic: host diet

text: female

characteristic: host sex

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human feces metagenome

characteristic: project name

text: human feces metagenome

text: Illumina

characteristic: sequencing method


text: Clinical Microbiomics

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: human

text: gut

text: stool

text: USA

text: not collected

text: not collected

text: Breastfed

text: female

text: human-gut

text: metagenome

text: human feces metagenome

characteristic: organism

text: human feces metagenome

text: Illumina

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Microbiomics

text: public

text: human

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Breastfed

text: male

text: human-gut

text: metagenome

text: human feces metagenome

text: human feces metagenome

text: Illumina


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Whitney Laboratory for Marine Bioscience

text: RNA isolated from comb rows

text: Beroe ovata

text: Beroe ovata

text: B.ovata comb row sample 3


text: STOCKHOLM UNIVERSITY

text: public

characteristic: SRA accession

tag: Namespace:STOCKHOLM UNIVERSITY

characteristic: Submitter Id

text: Spain

text: Santa Maria de Trassierra, Córdoba

characteristic: geographic location (region and locality)

text: 37°55'55.1N, 4°52'59.9W

characteristic: lat lon

text: Linum tenue

text: Linum tenue

text: leaf

characteristic: tissue type


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF CAMBRIDGE

text: public

tag: Namespace:UNIVERSITY OF CAMBRIDGE

unit: week

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

text: Protocols: 3 week old Arabidopsis thaliana seedlings were grown on ½ MS media containing 1% sucrose and kept in the dark for 48 hours prior to harvesting. Approximately 10 g of tissue. Prior to dark growth, plants were grown at 23 oC under 16 hours of light in controlled environment chambers. Seedlings were grown on plates for 3 weeks. DNA was extracted as in Naish et al., Science 2021 DNA was converted into an Oxford Nanopore sequencing library using kits.

characteristic: description

text: seedling developmental stage

characteristic: developmental stage

characteristic: ecotype

text: wild type genotype

characteristic: genotype

text: long day length regimen

characteristic: growth condition

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: whole organism

characteristic: organism part

text: Arabidopsis thaliana

characteristic: title


characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC center name

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text: public

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tag: Namespace:Laboratorio di Microbiologia, Dipartimento di Medicina di Laboratorio EOLAB, Ente Ospedaliero Cantonale, Bellinzona, Switzerland

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text: SIB

text: Laboratorio di Diagnostica Molecolare, Servizio di Genetica Medica EOLAB, Ente Ospedaliero Cantonale; Via Mirasole 22/A, 6500 Bellinzona

characteristic: collecting institution

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text: Spina Valeria Romina, Gloria Gaudio, Gladys Martinetti Lucchini, Christian Beisel, Tobias Schär, Ina Nissen, Natascha Santacroce, Rebecca Denes, Mirjam Feldkamp, Elodie Burcklen, Chaoran Chen, Sarah Nadeau, Louis du Plessis, Ivan Topolsky, Kim Philipp Jablonski, Lara Fuhrmann, David Dreifuss, Pelin Burcak Icer, Matteo Carrara, Shuqing Yu, Franziska Singer, Niko Beerenwinkel, Tanja Stadler

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: TI

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

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text: Homo sapiens

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text: restricted access

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text: restricted access

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text: hCoV-19/Switzerland/TI-EOC-38002106/2022

characteristic: isolate

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text: active surveillance not initiated by an outbreak


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

characteristic: GISAID Accession ID

text: Laboratorio di Microbiologia, Dipartimento di Medicina di Laboratorio EOLAB, Ente Ospedaliero Cantonale, Bellinzona, Switzerland

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characteristic: organism

characteristic: title


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text: Switzerland

characteristic: geographic location (country and/or sea)

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text: hCoV-19/Switzerland/TI-EOC-38002111/2022


characteristic: ENA-CHECKLIST

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text: hCoV-19/Switzerland/TI-EOC-38002114/2022

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text: Severe acute respiratory syndrome coronavirus 2

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text: public

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text: hCoV-19/Switzerland/TI-EOC-38002095/2022

characteristic: organism

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text: public

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characteristic: collecting institution

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characteristic: GISAID Accession ID

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text: public

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text: hCoV-19/Switzerland/TI-EOC-38002098/2022

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characteristic: ENA-CHECKLIST

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characteristic: External Id

text: public

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text: hCoV-19/Switzerland/TI-EOC-38002097/2022

characteristic: organism

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characteristic: GISAID Accession ID

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text: public

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characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

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text: hCoV-19/Switzerland/TI-EOC-38002103/2022


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: public

text: SIB

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text: hCoV-19/Switzerland/TI-EOC-38002101/2022

characteristic: isolate

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characteristic: GISAID Accession ID

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text: public

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text: SIB

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text: Switzerland

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characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: public

text: SIB

text: Laboratorio di Diagnostica Molecolare, Servizio di Genetica Medica EOLAB, Ente Ospedaliero Cantonale; Via Mirasole 22/A, 6500 Bellinzona

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

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text: restricted access

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text: hCoV-19/Switzerland/TI-EOC-38002102/2022


characteristic: GISAID Accession ID

characteristic: INSDC center name

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text: public

text: SIB

text: Spina Valeria Romina, Gloria Gaudio, Gladys Martinetti Lucchini, Christian Beisel, Tobias Schär, Ina Nissen, Natascha Santacroce, Rebecca Denes, Mirjam Feldkamp, Elodie Burcklen, Chaoran Chen, Sarah Nadeau, Louis du Plessis, Ivan Topolsky, Kim Philipp Jablonski, Lara Fuhrmann, David Dreifuss, Pelin Burcak Icer, Matteo Carrara, Shuqing Yu, Franziska Singer, Niko Beerenwinkel, Tanja Stadler

text: Switzerland

text: TI

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

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text: restricted access

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text: restricted access

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text: hCoV-19/Switzerland/TI-EOC-38002099/2022

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Laboratorio di Microbiologia, Dipartimento di Medicina di Laboratorio EOLAB, Ente Ospedaliero Cantonale, Bellinzona, Switzerland

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Switzerland

text: TI

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text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/TI-EOC-38002105/2022

characteristic: organism

text: active surveillance not initiated by an outbreak

characteristic: title


characteristic: GISAID Accession ID

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text: public

text: SIB

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: TI

characteristic: geographic location (region and locality)

text: Human

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text: restricted access

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text: restricted access

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text: hCoV-19/Switzerland/TI-EOC-38002116/2022


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: public

text: SIB

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text: restricted access

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text: restricted access

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text: hCoV-19/Switzerland/TI-EOC-38002104/2022

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status


characteristic: GISAID Accession ID

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

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text: SIB

characteristic: broker name

text: Switzerland

text: TI

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/TI-EOC-38002108/2022

characteristic: organism

text: active surveillance in response to outbreak

characteristic: title


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: public

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characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

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characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

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text: restricted access

text: restricted access

text: hCoV-19/Switzerland/TI-EOC-38002100/2022


characteristic: GISAID Accession ID

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

text: SIB

text: Switzerland

text: TI

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text: hCoV-19/Switzerland/TI-EOC-38002107/2022

characteristic: isolate

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characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

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characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Switzerland

text: TI

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

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text: hCoV-19/Switzerland/TI-EOC-38002115/2022

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

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text: public

text: SIB

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: TI

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

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text: hCoV-19/Switzerland/TI-EOC-38002109/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Switzerland

text: TI

text: Human

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characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

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text: restricted access

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text: hCoV-19/Switzerland/TI-EOC-38002112/2022

characteristic: isolate

characteristic: sample capture status


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Laboratorio di Diagnostica Molecolare, Servizio di Genetica Medica EOLAB, Ente Ospedaliero Cantonale; Via Mirasole 22/A, 6500 Bellinzona

text: Switzerland

text: TI

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/TI-EOC-38002113/2022

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

characteristic: collecting institution

characteristic: collection date

text: Spina Valeria Romina, Gloria Gaudio, Gladys Martinetti Lucchini, Christian Beisel, Tobias Schär, Ina Nissen, Natascha Santacroce, Rebecca Denes, Mirjam Feldkamp, Elodie Burcklen, Chaoran Chen, Sarah Nadeau, Louis du Plessis, Ivan Topolsky, Kim Philipp Jablonski, Lara Fuhrmann, David Dreifuss, Pelin Burcak Icer, Matteo Carrara, Shuqing Yu, Franziska Singer, Niko Beerenwinkel, Tanja Stadler

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: TI

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/TI-EOC-38002093/2022


E-MTAB-12010:Sample 1

text: OXFORD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-12010:Sample 1

characteristic: age

text: ArrayExpress

text: thale cress

characteristic: common name

text: Protocols: Whole rosettes were frozen in liquid nitrogen and stored at -80C. Whole rosettes were used. Plants were grown in a controlled environment room under long day conditions at 20C daytime temperature 18C nighttime temperature. There was no specific treatment. None applied. DNA was extracted from whole rosettes using the CTAB method. Library construction was performed by Novogene.

characteristic: description

text: mid rosette growth stage

characteristic: developmental stage

text: Landsberg

characteristic: ecotype

characteristic: genotype

text: long day length regimen

characteristic: growth condition

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: rosette

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DALHOUSIE UNIVERSITY

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:DALHOUSIE UNIVERSITY

characteristic: Submitter Id

text: rural

characteristic: broad-scale environmental context

text: Baseline (before iron supplementation) fecal sample

text: Feces

characteristic: environmental medium

text: Cambodia

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagnome

characteristic: investigation type

text: Gut

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: Examining the relationship between the gut microbiome and Iron Supplementation in Cambodian women of reproductive age.

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: DALHOUSIE UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: rural

characteristic: collection date

text: Endpoint (12 weeks after baseline) fecal sample

characteristic: description

text: Feces

text: Cambodia

characteristic: geographic location (country and/or sea)

text: human-gut

text: metagnome

text: Gut

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Charite Universitaetsmedizin

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Charite Universitaetsmedizin

characteristic: Submitter Id

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens


Water (1)

text: Utrecht University

text: public

text: Water (1)

tag: Namespace:Utrecht University

text: dwarf banana

text: M. acuminata (Cavendish) innoculated with Water, replicate 1

text: Musa acuminata

characteristic: organism

text: Musa acuminata


Water (2)

text: Utrecht University

text: public

text: Water (2)

text: dwarf banana

text: M. acuminata (Cavendish) innoculated with Water, replicate 2

text: Musa acuminata

text: Musa acuminata


Water (3)

text: Utrecht University

text: public

text: Water (3)

text: dwarf banana

text: M. acuminata (Cavendish) innoculated with Water, replicate 3

text: Musa acuminata

text: Musa acuminata


FocTR4 (1)

text: Utrecht University

text: public

text: FocTR4 (1)

text: dwarf banana

text: M. acuminata (Cavendish) innoculated with Fusarium oxysporum f.sp. cubense (isolate TR4), replicate 1

text: Musa acuminata

text: Musa acuminata


FocTR4 (2)

text: Utrecht University

text: public

text: FocTR4 (2)

text: dwarf banana

text: M. acuminata (Cavendish) innoculated with Fusarium oxysporum f.sp. cubense (isolate TR4), replicate 2

text: Musa acuminata

text: Musa acuminata


FocTR4 (3)

text: Utrecht University

text: public

text: FocTR4 (3)

text: dwarf banana

text: M. acuminata (Cavendish) innoculated with Fusarium oxysporum f.sp. cubense (isolate TR4), replicate 3

text: Musa acuminata

text: Musa acuminata


FocR1 (1)

text: Utrecht University

text: public

text: FocR1 (1)

text: dwarf banana

text: M. acuminata (Cavendish) innoculated with Fusarium oxysporum f.sp. cubense (isolate R1), replicate 1

text: Musa acuminata

text: Musa acuminata


FocR1 (2)

text: Utrecht University

text: public

text: FocR1 (2)

text: dwarf banana

text: M. acuminata (Cavendish) innoculated with Fusarium oxysporum f.sp. cubense (isolate R1), replicate 2

text: Musa acuminata

text: Musa acuminata


FocR1 (3)

text: Utrecht University

text: public

text: FocR1 (3)

text: dwarf banana

text: M. acuminata (Cavendish) innoculated with Fusarium oxysporum f.sp. cubense (isolate R1), replicate 3

text: Musa acuminata

text: Musa acuminata


Int 0h (1)

text: Utrecht University

text: public

text: Int 0h (1)

text: dwarf banana

text: M. acuminata (Cavendish) innoculated with Fusarium oxysporum f.sp. cubense (isolate R1) and subsequently Fusarium oxysporum f.sp. cubense (isolate TR4), time point: 0 h, replicate 1

text: Musa acuminata

text: Musa acuminata


Int 0h (2)

text: Utrecht University

text: public

text: Int 0h (2)

text: dwarf banana

text: M. acuminata (Cavendish) innoculated with Fusarium oxysporum f.sp. cubense (isolate R1) and subsequently Fusarium oxysporum f.sp. cubense (isolate TR4), time point: 0 h, replicate 2

text: Musa acuminata

text: Musa acuminata


Int 0h (3)

text: Utrecht University

text: public

text: Int 0h (3)

text: dwarf banana

text: M. acuminata (Cavendish) innoculated with Fusarium oxysporum f.sp. cubense (isolate R1) and subsequently Fusarium oxysporum f.sp. cubense (isolate TR4), time point: 0 h, replicate 3

text: Musa acuminata

text: Musa acuminata


Int 3h (1)

text: Utrecht University

text: public

text: Int 3h (1)

text: dwarf banana

text: M. acuminata (Cavendish) innoculated with Fusarium oxysporum f.sp. cubense (isolate R1) and subsequently Fusarium oxysporum f.sp. cubense (isolate TR4), time point: 3 h, replicate 1

text: Musa acuminata

text: Musa acuminata


Int 3h (2)

text: Utrecht University

text: public

text: Int 3h (2)

text: dwarf banana

text: M. acuminata (Cavendish) innoculated with Fusarium oxysporum f.sp. cubense (isolate R1) and subsequently Fusarium oxysporum f.sp. cubense (isolate TR4), time point: 3 h, replicate 2

text: Musa acuminata

text: Musa acuminata


Int 3h (3)

text: Utrecht University

text: public

text: Int 3h (3)

text: dwarf banana

text: M. acuminata (Cavendish) innoculated with Fusarium oxysporum f.sp. cubense (isolate R1) and subsequently Fusarium oxysporum f.sp. cubense (isolate TR4), time point: 3 h, replicate 3

text: Musa acuminata

text: Musa acuminata


Int 27h (1)

text: Utrecht University

text: public

text: Int 27h (1)

text: dwarf banana

text: M. acuminata (Cavendish) innoculated with Fusarium oxysporum f.sp. cubense (isolate R1) and subsequently Fusarium oxysporum f.sp. cubense (isolate TR4), time point: 27 h, replicate 1

text: Musa acuminata

text: Musa acuminata


Int 27h (2)

text: Utrecht University

text: public

text: Int 27h (2)

text: dwarf banana

text: M. acuminata (Cavendish) innoculated with Fusarium oxysporum f.sp. cubense (isolate R1) and subsequently Fusarium oxysporum f.sp. cubense (isolate TR4), time point: 27 h, replicate 2

text: Musa acuminata

text: Musa acuminata


Int 27h (3)

text: Utrecht University

text: public

text: Int 27h (3)

text: dwarf banana

text: M. acuminata (Cavendish) innoculated with Fusarium oxysporum f.sp. cubense (isolate R1) and subsequently Fusarium oxysporum f.sp. cubense (isolate TR4), time point: 27 h, replicate 3

text: Musa acuminata

text: Musa acuminata


Int 51h (1)

text: Utrecht University

text: public

text: Int 51h (1)

text: dwarf banana

text: M. acuminata (Cavendish) innoculated with Fusarium oxysporum f.sp. cubense (isolate R1) and subsequently Fusarium oxysporum f.sp. cubense (isolate TR4), time point: 51 h, replicate 1

text: Musa acuminata

text: Musa acuminata


Int 51h (2)

text: Utrecht University

text: public

text: Int 51h (2)

text: dwarf banana

text: M. acuminata (Cavendish) innoculated with Fusarium oxysporum f.sp. cubense (isolate R1) and subsequently Fusarium oxysporum f.sp. cubense (isolate TR4), time point: 51 h, replicate 2

text: Musa acuminata

text: Musa acuminata


Int 51h (3)

text: Utrecht University

text: public

text: Int 51h (3)

text: dwarf banana

text: M. acuminata (Cavendish) innoculated with Fusarium oxysporum f.sp. cubense (isolate R1) and subsequently Fusarium oxysporum f.sp. cubense (isolate TR4), time point: 51 h, replicate 3

text: Musa acuminata

text: Musa acuminata


Race 1 (1)

text: Utrecht University

text: public

text: Race 1 (1)

text: Fusarium oxysporum f.sp. cubense Race 1 (CNPMF 000-8-01-R1) on culture, replicate 1

text: Fusarium oxysporum f. sp. cubense

text: Fusarium oxysporum f. sp. cubense


Race 1 (2)

text: Utrecht University

text: public

text: Race 1 (2)

text: Fusarium oxysporum f.sp. cubense Race 1 (CNPMF 000-8-01-R1) on culture, replicate 2

text: Fusarium oxysporum f. sp. cubense

text: Fusarium oxysporum f. sp. cubense


Race 1 (3)

text: Utrecht University

text: public

text: Race 1 (3)

text: Fusarium oxysporum f.sp. cubense Race 1 (CNPMF 000-8-01-R1) on culture, replicate 3

text: Fusarium oxysporum f. sp. cubense

text: Fusarium oxysporum f. sp. cubense


TR4 (1)

text: Utrecht University

text: public

text: TR4 (1)

text: Fusarium oxysporum f.sp. cubense TR4 (II5) on culture, replicate 1

text: Fusarium oxysporum f. sp. cubense

text: Fusarium oxysporum f. sp. cubense


TR4 (2)

text: Utrecht University

text: public

text: TR4 (2)

text: Fusarium oxysporum f.sp. cubense TR4 (II5) on culture, replicate 2

text: Fusarium oxysporum f. sp. cubense

text: Fusarium oxysporum f. sp. cubense


TR4 (3)

text: Utrecht University

text: public

text: TR4 (3)

text: Fusarium oxysporum f.sp. cubense TR4 (II5) on culture, replicate 3

text: Fusarium oxysporum f. sp. cubense

text: Fusarium oxysporum f. sp. cubense


text: Institut Pasteur

text: public

tag: Namespace:Institut Pasteur

text: Klebsiella variicola

text: Klebsiella variicola


text: Institut Pasteur

text: public

text: Klebsiella pneumoniae subsp. pneumoniae

text: Klebsiella pneumoniae subsp. pneumoniae


text: UNIVERSITY OF COLOGNE

text: public

tag: Namespace:UNIVERSITY OF COLOGNE

text: Germany, Giessen

characteristic: country

characteristic: genotype

text: Homo sapiens

characteristic: host

text: Yes

text: R-swab

text: Enterococcus faecium

text: Enterococcus faecium

text: VanB

characteristic: serovar


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF COLOGNE

characteristic: INSDC center name

text: public

text: Germany, Giessen

text: Homo sapiens

text: Yes

text: R-swab

text: Enterococcus faecium

text: Enterococcus faecium

text: VanA

characteristic: title


text: UNIVERSITY OF COLOGNE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Germany, Cologne

text: Homo sapiens

text: Yes

text: R-swab

text: Enterococcus faecium

text: Enterococcus faecium

text: VanB


characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF COLOGNE

text: public

text: Germany, Cologne

text: Homo sapiens

text: Yes

text: R-swab

text: Enterococcus faecium

text: Enterococcus faecium

text: VanA


characteristic: External Id

text: UNIVERSITY OF COLOGNE

text: public

text: Germany, Cologne

text: Homo sapiens

text: Yes

text: R-swab

text: Enterococcus faecium

text: Enterococcus faecium

text: VanAB


text: Instituto Nacional de Saude Doutor Ricardo Jorge I.P. (INSA) - Portugal

characteristic: CENTER NAME

characteristic: GISAID Accession ID

text: public

characteristic: INSDC status

tag: Namespace:NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE

characteristic: TITLE

text: not provided

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Portugal

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

text: not provided

characteristic: common name

text: Portugal

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: External Id

text: Health Board of Estonia

text: public

characteristic: INSDC status

text: ena-upload-cli v0.6.0 @ Galaxy

tag: Namespace:Health Board of Estonia

text: The Health Board of Estonia

characteristic: collecting institution

text: Aare Abroi, Radko Avi, Taavi Päll, Heiki Niglas , Merit Pauskar, Arina Shablinskaja, Eveli Kallas, Andrio Lahesaare, Kai Truusalu, Dagmar Hoidmets, Olga Sadikova, Kaspar Ratnik, Hanna Sepp, Liidia Dotsenko, Jevgenia Epštein, Heleene Suija, Katrin Kaarna, Lili Milani, Mait Metspalu, Ott Eric Oopkaup, Ivar Koppel, Erik Jaaniso, Ivan Kuzmin, Uku Raudvere, Tuuli Reisberg, Hedi Peterson, Ulvi Gerst Talas, Paul Naaber, Mari-Anne Härma, Irja Lutsar, Kristi Huik, Heleri Inno

characteristic: collector name

text: Nasopharyngeal/oropharyngeal swab from Estonian Covid-19 patient

characteristic: description

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Northern Estonia

characteristic: geographic location (region and locality)

unit: year

characteristic: host age

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: Homo sapiens

text: male

text: active surveillance not initiated by an outbreak

text: PCR tiled amplicon WGS of SARS-Cov-2, pre-selected subset from active surveillance


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Health Board of Estonia

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: ena-upload-cli v0.6.0 @ Galaxy

text: The Health Board of Estonia

text: Estonia

text: Northern Estonia

text: human

text: diseased

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host subject id

characteristic: isolate

characteristic: sample capture status


characteristic: External Id

text: Health Board of Estonia

text: public

characteristic: INSDC status

text: ena-upload-cli v0.6.0 @ Galaxy

characteristic: Submitter Id

text: The Health Board of Estonia

characteristic: collecting institution

characteristic: collector name

characteristic: description

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: North-Eastern Estonia

text: human

text: diseased

text: Homo sapiens

text: female

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Health Board of Estonia

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: ena-upload-cli v0.6.0 @ Galaxy

text: The Health Board of Estonia

text: Estonia

text: Central Estonia

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: Homo sapiens

text: female


characteristic: External Id

text: Health Board of Estonia

text: public

characteristic: INSDC status

text: ena-upload-cli v0.6.0 @ Galaxy

characteristic: Submitter Id

text: The Health Board of Estonia

characteristic: collecting institution

characteristic: collector name

characteristic: description

text: Estonia

text: Western Estonia

text: human

text: diseased

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

characteristic: host subject id

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Health Board of Estonia

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ena-upload-cli v0.6.0 @ Galaxy

text: The Health Board of Estonia

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Southern Estonia

text: human

text: diseased

text: Homo sapiens

text: female

characteristic: organism

characteristic: title


characteristic: External Id

text: Health Board of Estonia

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.6.0 @ Galaxy

characteristic: Submitter Id

text: The Health Board of Estonia

characteristic: collecting institution

characteristic: collector name

characteristic: description

text: Estonia

text: Northern Estonia

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Health Board of Estonia

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ena-upload-cli v0.6.0 @ Galaxy

text: The Health Board of Estonia

text: Estonia

text: Southern Estonia

text: human

text: diseased

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

characteristic: host subject id

characteristic: isolate

characteristic: sample capture status


characteristic: External Id

text: Health Board of Estonia

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.6.0 @ Galaxy

characteristic: Submitter Id

text: The Health Board of Estonia

characteristic: collecting institution

characteristic: collector name

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Southern Estonia

text: human

text: not provided

text: Homo sapiens

text: male

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Health Board of Estonia

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ena-upload-cli v0.6.0 @ Galaxy

text: The Health Board of Estonia

characteristic: description

text: Estonia

text: Southern Estonia

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female


characteristic: External Id

text: Health Board of Estonia

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.6.0 @ Galaxy

characteristic: Submitter Id

text: The Health Board of Estonia

characteristic: collecting institution

characteristic: collector name

text: Estonia

text: North-Eastern Estonia

text: human

text: diseased

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

characteristic: host subject id

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Health Board of Estonia

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ena-upload-cli v0.6.0 @ Galaxy

text: The Health Board of Estonia

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Northern Estonia

text: human

text: not provided

text: Homo sapiens

text: female

characteristic: organism

characteristic: title


characteristic: External Id

text: Health Board of Estonia

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.6.0 @ Galaxy

characteristic: Submitter Id

text: The Health Board of Estonia

characteristic: collecting institution

characteristic: collector name

characteristic: description

text: Estonia

text: Western Estonia

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: Homo sapiens

text: female


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Health Board of Estonia

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ena-upload-cli v0.6.0 @ Galaxy

text: The Health Board of Estonia

text: Estonia

text: human

text: diseased

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

characteristic: host subject id

characteristic: isolate

characteristic: sample capture status


characteristic: External Id

text: Health Board of Estonia

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.6.0 @ Galaxy

characteristic: Submitter Id

text: The Health Board of Estonia

characteristic: collecting institution

characteristic: collector name

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Northern Estonia

text: human

text: healthy

text: Homo sapiens

text: female

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF COLOGNE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Germany, Cologne

characteristic: country

characteristic: genotype

text: Homo sapiens

characteristic: host

text: Yes

text: R-swab

text: Enterococcus faecium

text: Enterococcus faecium

text: VanB

characteristic: serovar


characteristic: External Id

text: UNIVERSITY OF COLOGNE

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Germany, Lübeck

text: Homo sapiens

text: Yes

text: R-swab

text: Enterococcus faecium

text: Enterococcus faecium

text: VanB


text: UNIVERSITY OF COLOGNE

text: public

text: Germany, Lübeck

text: Homo sapiens

text: Yes

text: R-swab

text: Enterococcus faecium

text: Enterococcus faecium

text: VanA


text: UNIVERSITY OF COLOGNE

text: public

text: Germany, Tübingen

text: Homo sapiens

text: Yes

text: R-swab

text: Enterococcus faecium

text: Enterococcus faecium

text: VanB


text: UNIVERSITY OF COLOGNE

text: public

text: not provided, Cologne

text: Homo sapiens

text: Yes

text: R-swab

text: Enterococcus faecium

text: Enterococcus faecium

text: VanB


text: UNIVERSITY OF COLOGNE

text: public

text: Germany, Giessen

text: Homo sapiens

text: Yes

text: blood

text: Enterococcus faecium

text: Enterococcus faecium

text: VanB


text: UNIVERSITY OF COLOGNE

text: public

text: Germany, Giessen

text: Homo sapiens

text: Yes

text: blood

text: Enterococcus faecium

text: Enterococcus faecium

text: VanA


text: UNIVERSITY OF COLOGNE

text: public

text: not provided, Cologne

text: Homo sapiens

text: Yes

text: R-swab

text: Enterococcus faecium

text: Enterococcus faecium

text: VSE


text: UCSDMI

text: public

characteristic: description

text: TRUE

characteristic: elevation

text: Control

text: Negative

text: Sterile water blank

text: urban biome

text: research facility

text: sterile water

text: misc environment

text: USA:CA:San Diego

text: years

text: cm

text: kg

characteristic: latitude

characteristic: longitude

text: metagenome

text: UCSDMI

text: FALSE

text: TRUE

characteristic: public

text: control blank

text: metagenome

text: American Gut Project


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

text: public

text: TRUE

text: Control

text: Negative

text: Sterile water blank

text: urban biome

text: research facility

text: sterile water

text: misc environment

text: USA:CA:San Diego

text: years

text: cm

text: kg

text: metagenome

characteristic: organism

text: UCSDMI

text: FALSE

text: TRUE

text: control blank

text: metagenome

characteristic: title

text: American Gut Project


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:Latvian Biomedical Research and Study Centre

text: 16S rRNA sequencing of luminal metagenome of proximal small intestine after 10 weeks long metformin treatment

text: gut metagenome

text: gut metagenome

text: Gut microbiome of high-fat diet-induced type 2 diabetes mouse model in response to metformin treatment


tag: attribute

characteristic: External Id

text: Latvian Biomedical Research and Study Centre

text: public

text: 16S rRNA sequencing of luminal metagenome of distal small intestine after 10 weeks long metformin treatment

text: gut metagenome

text: gut metagenome


text: public

characteristic: INSDC status

text: 16S rRNA sequencing of luminal metagenome of cecum after 10 weeks long metformin treatment

text: gut metagenome

text: gut metagenome


text: public

characteristic: SRA accession

text: 16S rRNA sequencing of luminal metagenome of colon after 10 weeks long metformin treatment

text: gut metagenome

text: gut metagenome


text: public

characteristic: Submitter Id

text: 16S rRNA sequencing of mucosal metagenome of proximal small intestine after 10 weeks long metformin treatment

text: gut metagenome

text: gut metagenome


text: public

text: 16S rRNA sequencing of mucosal metagenome of distal small intestine after 10 weeks long metformin treatment

characteristic: description

text: gut metagenome

text: gut metagenome


text: public

text: 16S rRNA sequencing of mucosal metagenome of cecum after 10 weeks long metformin treatment

text: gut metagenome

text: gut metagenome


text: public

text: 16S rRNA sequencing of mucosal metagenome of colon after 10 weeks long metformin treatment

text: gut metagenome

text: gut metagenome


text: public

text: gut metagenome

text: gut metagenome


text: UNIVERSITY OF COLOGNE

text: public

text: Germany, Cologne

characteristic: country

characteristic: genotype

text: Homo sapiens

characteristic: host

text: Yes

text: blood

text: Enterococcus faecium

text: Enterococcus faecium

text: VSE

characteristic: serovar


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF COLOGNE

text: public

text: Germany, Cologne

text: Homo sapiens

text: Yes

text: blood

text: Enterococcus faecium

text: Enterococcus faecium

text: VanA


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF COLOGNE

text: public

text: not provided, Cologne

text: Homo sapiens

text: Yes

text: R-swab

text: Enterococcus faecium

text: Enterococcus faecium

text: VanB


characteristic: ENA-LAST-UPDATE

text: DALHOUSIE UNIVERSITY

text: public

text: rural

characteristic: broad-scale environmental context

characteristic: collection date

text: Endpoint (12 weeks after baseline) fecal sample

text: Feces

characteristic: environmental medium

text: Cambodia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagnome

characteristic: investigation type

text: Gut

characteristic: local environmental context

text: human gut metagenome

text: Examining the relationship between the gut microbiome and Iron Supplementation in Cambodian women of reproductive age.

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq

characteristic: sequencing method


characteristic: External Id

text: UNIVERSITY OF COLOGNE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Germany, Tübingen

characteristic: country

characteristic: genotype

text: Homo sapiens

text: Yes

text: blood

text: Enterococcus faecium

characteristic: organism

text: Enterococcus faecium

text: VanB

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

tag: Namespace:The First Affiliated Hospital, Zheng Zhou University.

text: BALF

characteristic: description

text: metagenome

text: metagenome

text: BALF


text: The First Affiliated Hospital, Zheng Zhou University.

text: public

text: BALF

text: metagenome

text: metagenome

text: BALF


text: GENOME INSTITUTE OF SINGAPORE

text: public

text: ena-SAMPLE-TAB-02-08-2022-08:52:14:861-12448

tag: Namespace:GENOME INSTITUTE OF SINGAPORE

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: GENOME INSTITUTE OF SINGAPORE

text: public

text: ena-SAMPLE-TAB-02-08-2022-08:52:14:861-12449

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: GENOME INSTITUTE OF SINGAPORE

text: public

text: ena-SAMPLE-TAB-02-08-2022-08:52:14:861-12450

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: GENOME INSTITUTE OF SINGAPORE

text: public

text: ena-SAMPLE-TAB-02-08-2022-08:52:14:861-12451

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: GENOME INSTITUTE OF SINGAPORE

text: public

text: ena-SAMPLE-TAB-02-08-2022-08:52:14:861-12452

text: Isolates

text: Escherichia coli

text: Escherichia coli