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characteristic: ENA-FIRST-PUBLIC

text: Dr. Risch

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

text: Dr. Risch Ostschweiz AG, Lagerstrasse 30, 9470 Buchs

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-Risch-0910R13549/2022

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: Dr. Risch

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Nadia Wohlwend, Faina Wehrli, Dominique Fabien Hilti, Sinem Kas, Martin Risch, Thomas Bodmer, Lorenz Risch

text: Switzerland

text: BE

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-Risch-0808R13451/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Dr. Risch

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GR

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GR-Risch-0830R13412/2022

characteristic: organism

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: Dr. Risch

characteristic: INSDC center name

text: public

text: SIB

text: Switzerland

text: TG

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/TG-Risch-0907R13551/2022

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Dr. Risch

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: JU

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/JU-Risch-0721R13430/2022


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: Dr. Risch

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: TI

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/TI-Risch-0910R13553/2022

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Dr. Risch

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-Risch-0725R13432/2022

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: Dr. Risch

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: ZH

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-Risch-0908R13594/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Dr. Risch

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-Risch-0806R13443/2022

characteristic: organism

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: Dr. Risch

characteristic: INSDC center name

text: public

text: SIB

text: Liechtenstein

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Liechtenstein/FL-Risch-0902R13539/2022

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: University of Copenhagen

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

tag: Namespace:University of Copenhagen

characteristic: Submitter Id

text: tempreate biome

characteristic: broad-scale environmental context

characteristic: collection date

unit: m

characteristic: depth

characteristic: description

characteristic: elevation

text: beech forest soil

characteristic: environmental medium

text: Denmark

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Denmark, Sjælland, Strødam

characteristic: geographic location (region and locality)

text: temperate woodland biome

characteristic: local environmental context

text: soil metagenome

characteristic: project name

unit: g

characteristic: sample weight for DNA extraction

text: soil metagenome

text: Illumina

characteristic: sequencing method

text: A horizon

characteristic: soil horizon

text: Luvisol

characteristic: soil type

text: frozen

characteristic: storage conditions (fresh/frozen/other)


case 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KCL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: case 1

characteristic: Submitter Id

text: Guy's and St. Thomas' NHS Foundation Trust

characteristic: collecting institution

text: Luke Blagdon Snell

characteristic: collector name

text: nose and throat swab

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: Case 1

characteristic: host subject id

text: nose and throat swab

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: case 1

characteristic: title


case 2 dec 2020

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KCL

characteristic: INSDC center name

text: public

text: case 2 dec 2020

characteristic: collection date

text: Luke Blagdon Snell

text: nose and throat swab

characteristic: description

text: United Kingdom

text: human

text: diseased

text: Homo sapiens

text: male

text: Case 2

text: nose and throat swab

text: case 2 dec 2020


case 2 jan 2022

text: KCL

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: case 2 jan 2022

characteristic: Submitter Id

characteristic: collecting institution

text: Luke Blagdon Snell

characteristic: collector name

text: nose and throat swab

text: United Kingdom

text: human

text: diseased

text: Homo sapiens

text: male

text: Case 2

text: nose and throat swab

text: case 2 jan 2022


case 3

text: KCL

text: public

text: case 3

text: Luke Blagdon Snell

text: nose and throat swab

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: Case 3

characteristic: host subject id

text: nose and throat swab

characteristic: isolate

text: case 3


case 4 post treatment

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KCL

characteristic: INSDC center name

text: public

text: case 4 post treatment

text: Luke Blagdon Snell

text: nose and throat swab

text: United Kingdom

text: human

text: diseased

text: Homo sapiens

text: female

text: Case 4

text: nose and throat swab

characteristic: organism

text: case 4 post treatment

characteristic: title


case 5 apr 2022

text: KCL

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: case 5 apr 2022

characteristic: Submitter Id

characteristic: collection date

text: Luke Blagdon Snell

text: nose and throat swab

characteristic: description

text: United Kingdom

text: human

text: diseased

text: Homo sapiens

text: male

text: Case 5

text: nose and throat swab

text: case 5 apr 2022


case 5 jul 2022

text: KCL

text: public

text: case 5 jul 2022

characteristic: collecting institution

text: Luke Blagdon Snell

characteristic: collector name

text: nose and throat swab

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: Case 5

text: nose and throat swab

text: case 5 jul 2022


case 6

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KCL

characteristic: INSDC center name

text: public

text: case 6

text: Luke Blagdon Snell

text: nose and throat swab

text: United Kingdom

text: human

text: diseased

text: Homo sapiens

text: female

text: Case 6

characteristic: host subject id

text: nose and throat swab

characteristic: isolate

text: case 6


text: DTU-GE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

characteristic: broker name

text: North Carolina State University/Sophia Kathariou

text: natural environment

text: USA

text: California

characteristic: geographic location (region and locality)

text: not provided

text: natural environment

text: Listeria monocytogenes

characteristic: organism

text: Listeria monocytogenes

text: not provided

characteristic: serovar

text: Lm

characteristic: title


characteristic: ENA-CHECKLIST

text: DTU-GE

text: public

text: DTU-GE

text: bear isolate

characteristic: description

text: USA

characteristic: geographic location (country and/or sea)

text: North Carolina

text: Ursidae

characteristic: host scientific name

text: bear isolate

text: Listeria monocytogenes

text: Listeria monocytogenes

text: not provided

text: Lm


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

characteristic: INSDC center name

text: public

text: DTU-GE

text: natural environment

text: USA

text: Virginia

text: not provided

text: natural environment

text: Listeria monocytogenes

text: Listeria monocytogenes

text: atypical

text: Lm


text: DTU-GE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: DTU-GE

text: natural environment

text: USA

text: Virginia

text: not provided

text: natural environment

text: Listeria monocytogenes

text: Listeria monocytogenes

text: Lm


text: DTU-GE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: DTU-GE

text: natural environment

text: USA

text: Virginia

text: not provided

text: natural environment

text: Listeria monocytogenes

text: Listeria monocytogenes

text: not provided

text: Lm


text: Tromsoe Ecosystem Genomics

text: public

tag: Namespace:Tromsoe Ecosystem Genomics

characteristic: Submitter Id

text: Mortensnes 16S sequence library 1 (TEG-012 mam2_EG10)

text: Metazoa environmental sample

text: Metazoa environmental sample


text: Tromsoe Ecosystem Genomics

text: public

text: Mortensnes 16S sequence library 2 (TEG-012 mam4_EG10)

text: Metazoa environmental sample

text: Metazoa environmental sample


text: Skurnik

text: public

text: EnteroBase

characteristic: broker name

text: EnteroBase

text: M. Skurnik, University of Helsinki

text: Whole genome sequencing data uploaded by EnteroBase user

text: Finland, Uusimaa, Helsinki

characteristic: geographic location

text: Human, peritoneal puncture fluid

text: Escherichia coli

text: Escherichia coli

characteristic: strain


text: public

tag: Namespace:Laboratory of Genomics and Bioinformatics, Comenius University Science Park

text: Science Park of Comenius University of Bratislava

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Slovakia

unit: year

characteristic: host age

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: RNA

characteristic: isolate

text: Nasopharyngeal swab

characteristic: isolation source-host associated

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Laboratory of Genomics and Bioinformatics, Comenius University Science Park

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Slovakia

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: RNA

text: Nasopharyngeal swab


text: public

characteristic: Submitter Id

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Slovakia

characteristic: host age

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: RNA

text: Nasopharyngeal swab


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: not provided

text: Slovakia

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: RNA

characteristic: isolate

text: Nasopharyngeal swab

characteristic: isolation source-host associated

characteristic: organism

characteristic: sample capture status


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: broker name

text: not provided

text: Slovakia

characteristic: geographic location (country and/or sea)

unit: month

text: Human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: RNA

text: Nasopharyngeal swab


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UMR 1137 IAME

text: public

tag: Namespace:UMR 1137 IAME

text: coli

characteristic: common name

characteristic: description

text: France

text: homo sapiens

text: Faeces

text: Escherichia coli

text: Escherichia coli

text: NILS01:D /STw 69 /STp 3 / O25:H18

characteristic: strain


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UMR 1137 IAME

text: public

text: coli

text: France

text: homo sapiens

text: Faeces

characteristic: isolate

text: Escherichia coli

text: Escherichia coli

text: NILS02:B1 /STw 224 /STp 730 / O173:H23


text: UMR 1137 IAME

characteristic: INSDC center name

text: public

text: coli

text: France

text: homo sapiens

text: Faeces

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: NILS03:A /STw 216 /STp 960 / O11:H4


text: UMR 1137 IAME

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: coli

text: France

text: homo sapiens

text: Faeces

text: Escherichia coli

text: Escherichia coli

text: NILS04:A /STw 46 /STp 398 / O9:H4


text: UMR 1137 IAME

text: public

characteristic: INSDC status

characteristic: SRA accession

text: coli

text: France

text: homo sapiens

text: Faeces

text: Escherichia coli

text: Escherichia coli

text: NILS05:E /STw 543 /STp 864 / O169:H9


text: UMR 1137 IAME

text: public

characteristic: Submitter Id

text: coli

text: France

text: homo sapiens

text: Faeces

text: Escherichia coli

text: Escherichia coli

text: NILS06:A /STw 10 /STp 2 / O9:H9


text: UMR 1137 IAME

text: public

text: coli

text: France

characteristic: geographic location (country and/or sea)

text: homo sapiens

text: Faeces

text: Escherichia coli

text: Escherichia coli

text: NILS07:A /STw 10 /STp 835 / O105:H6


text: UMR 1137 IAME

text: public

text: coli

text: France

text: homo sapiens

characteristic: host scientific name

text: Faeces

text: Escherichia coli

text: Escherichia coli

text: NILS08:A /STw 10 /STp 836 / O107:H27