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characteristic: virus identifier


characteristic: ENA-CHECKLIST

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text: public

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characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

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text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (longitude)

text: Europe / Ireland / Mayo

text: human

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

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characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/MO-NVRL-S22IRL00432687/2022

characteristic: title


text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

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characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Europe / Ireland / Mayo

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not applicable

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characteristic: isolation source host-associated

text: active surveillance in response to outbreak

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text: hCoV-19/Ireland/MO-NVRL-S22IRL00432689/2022

characteristic: virus identifier


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text: Europe / Ireland / Mayo

text: human

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/MO-NVRL-S22IRL00432409/2022

characteristic: title


text: NVRL

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characteristic: broker name

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text: not provided

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characteristic: geographic location (country and/or sea)

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text: Europe / Ireland / Mayo

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: female

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text: hCoV-19/Ireland/MO-NVRL-S22IRL00432722/2022

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

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text: Ireland

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text: Europe / Ireland / Offaly

text: human

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/OY-NVRL-S22IRL00430261/2022

characteristic: title


text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Europe / Ireland / Offaly

characteristic: geographic location (region and locality)

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text: human

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text: not provided

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text: male

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text: not provided

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text: hCoV-19/Ireland/OY-NVRL-S22IRL00430286/2022

characteristic: virus identifier


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text: National Virus Reference Laboratory

text: not provided

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text: Ireland

characteristic: geographic location (longitude)

text: Europe / Ireland / Offaly

text: human

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/OY-NVRL-S22IRL00409076/2022

characteristic: title


text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

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text: Ireland

characteristic: geographic location (country and/or sea)

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text: Europe / Ireland / Offaly

characteristic: geographic location (region and locality)

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text: human

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text: not provided

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text: hCoV-19/Ireland/OY-NVRL-S22IRL00409359/2022

characteristic: virus identifier


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text: National Virus Reference Laboratory

text: not provided

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text: Ireland

characteristic: geographic location (longitude)

text: Europe / Ireland / Offaly

text: human

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/OY-NVRL-S22IRL00432307/2022

characteristic: title


text: NVRL

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text: Irish Consortium for Sequencing Covid

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text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

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text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Europe / Ireland / Offaly

characteristic: geographic location (region and locality)

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text: human

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text: not provided

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text: female

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text: hCoV-19/Ireland/OY-NVRL-S22IRL00432310/2022

characteristic: virus identifier


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text: Ireland

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text: Europe / Ireland / Offaly

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text: not provided

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characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/OY-NVRL-S22IRL00432303/2022

characteristic: title


text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

characteristic: collector name

text: Human coronavirus 2019

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text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Europe / Ireland / Roscommon

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

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text: hCoV-19/Ireland/RN-NVRL-S22IRL00430491/2022

characteristic: virus identifier


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text: Europe / Ireland / Sligo

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text: Homo sapiens

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text: female

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text: hCoV-19/Ireland/SO-NVRL-S22IRL00409874/2022

characteristic: title


text: NVRL

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characteristic: geographic location (country and/or sea)

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text: Europe / Ireland / Sligo

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text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (longitude)

text: Europe / Ireland / Sligo

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text: not provided

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characteristic: host health state

text: Homo sapiens

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text: Europe / Ireland / Sligo

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text: human

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text: Europe / Ireland / Sligo

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text: not provided

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text: Homo sapiens

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text: female

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/SO-NVRL-S22IRL00432406/2022

characteristic: title


text: NVRL

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text: Europe / Ireland / Sligo

characteristic: geographic location (region and locality)

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text: human

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text: hCoV-19/Ireland/SO-NVRL-S22IRL00432755/2022

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text: Europe / Ireland / Tipperary

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text: Homo sapiens

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text: hCoV-19/Ireland/TA-NVRL-S22IRL00430572/2022

characteristic: title


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text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

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text: human

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text: hCoV-19/Ireland/TA-NVRL-S22IRL00409373/2022

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text: National Virus Reference Laboratory

text: not provided

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text: Europe / Ireland / Tipperary

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text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

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text: male

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characteristic: title


text: NVRL

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text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

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text: Ireland

characteristic: geographic location (country and/or sea)

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text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

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text: human

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text: hCoV-19/Ireland/TA-NVRL-S22IRL00426602/2022

characteristic: virus identifier


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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

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text: Europe / Ireland / Tipperary

text: human

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

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text: female

text: not provided

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/TA-NVRL-S22IRL00426497/2022

characteristic: title


text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

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characteristic: geographic location (country and/or sea)

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text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

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text: human

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text: hCoV-19/Ireland/TA-NVRL-S22IRL00426594/2022

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text: National Virus Reference Laboratory

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text: Europe / Ireland / Tipperary

text: human

text: not provided

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characteristic: host health state

text: Homo sapiens

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text: male

text: not provided

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/TA-NVRL-S22IRL00432588/2022

characteristic: title


text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

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text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

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text: human

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text: not provided

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text: not applicable

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text: hCoV-19/Ireland/TA-NVRL-S22IRL00432644/2022

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

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characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

text: human

text: not provided

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characteristic: host health state

text: Homo sapiens

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text: female

text: not provided

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/TA-NVRL-S22IRL00432589/2022

characteristic: title


text: NVRL

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characteristic: broker name

text: National Virus Reference Laboratory

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text: not provided

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text: Human coronavirus 2019

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text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

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text: human

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text: not provided

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characteristic: virus identifier


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characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

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text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (longitude)

text: Europe / Ireland / Tipperary

text: human

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

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text: female

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text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/TA-NVRL-S22IRL00432653/2022

characteristic: title


text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Europe / Ireland / Tipperary

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: active surveillance in response to outbreak

characteristic: sample capture status

text: hCoV-19/Ireland/TA-NVRL-S22IRL00432647/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (longitude)

text: Europe / Ireland / Waterford

text: human

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/WD-NVRL-S22IRL00432717/2022

characteristic: title


text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Europe / Ireland / Waterford

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/WD-NVRL-S22IRL00432685/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (longitude)

text: Europe / Ireland / Waterford

text: human

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/WD-NVRL-S22IRL00432718/2022

characteristic: title


text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Europe / Ireland / Wicklow

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/WW-NVRL-S22IRL00426378/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (longitude)

text: Europe / Ireland / Wicklow

text: human

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/WW-NVRL-S22IRL00426379/2022

characteristic: title


text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Europe / Ireland / Wexford

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/WX-NVRL-S22IRL00430621/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (longitude)

text: Europe / Ireland / Wexford

text: human

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/WX-NVRL-S22IRL00430595/2022

characteristic: title


text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Europe / Ireland / Wexford

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/WX-NVRL-S22IRL00432401/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (longitude)

text: Europe / Ireland / Wexford

text: human

text: not provided

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/WX-NVRL-S22IRL00432405/2022

characteristic: title


text: public

tag: Namespace:INSTITUTE OF APPLIED BIOSCIENCES - CERTH

characteristic: Submitter Id

text: General Hospital of Drama

characteristic: collecting institution

text: not provided

characteristic: collector name

characteristic: common name

text: Greece

characteristic: geographic location (country and/or sea)

text: Drama

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: Homo sapiens

text: male

characteristic: host sex

characteristic: host subject id

text: RNA

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSTITUTE OF APPLIED BIOSCIENCES - CERTH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: General Hospital of Serres

text: not provided

characteristic: description

text: Greece

text: Serres

text: human

text: not provided

text: Homo sapiens

text: female

text: RNA


text: public

characteristic: Submitter Id

text: General Hospital of Serres

characteristic: collecting institution

text: not provided

characteristic: collector name

characteristic: common name

text: Greece

text: Serres

text: human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

text: RNA

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: General Hospital of Chalkidiki

text: not provided

text: Greece

characteristic: geographic location (country and/or sea)

text: Chalkidiki

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: Homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

text: RNA

characteristic: sample capture status


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: General Hospital of Xanthi

characteristic: collecting institution

text: not provided

characteristic: description

text: Greece

text: Xanthi

text: human

text: not provided

text: Homo sapiens

text: female

text: RNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: General Hospital of Xanthi

text: not provided

characteristic: collector name

characteristic: common name

text: Greece

text: Xanthi

text: human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

text: RNA

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: Thessaloniki General Hospital G.Papanikolaou

text: not provided

text: Greece

characteristic: geographic location (country and/or sea)

text: Thessaloniki

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: Homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

text: RNA

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: not provided

characteristic: description

text: Greece

text: Thessaloniki

text: human

text: not provided

text: Homo sapiens

text: male

text: RNA

text: Severe acute respiratory syndrome coronavirus 2


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: General Hospital of Katerini

text: not provided

characteristic: collector name

characteristic: common name

text: Greece

text: Katerini

text: human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

text: RNA

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

text: public

text: General Hospital of Katerini

text: not provided

text: Greece

characteristic: geographic location (country and/or sea)

text: Katerini

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: Homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

text: RNA

characteristic: sample capture status


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: University General Hospital of Thessaloniki, AHEPA

characteristic: collecting institution

text: not provided

characteristic: description

text: Greece

text: Thessaloniki

text: human

text: not provided

text: Homo sapiens

text: female

text: RNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: not provided

characteristic: collector name

characteristic: common name

text: Greece

text: Thessaloniki

text: human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

text: RNA

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: General hospital of Goumenissa

text: not provided

text: Greece

characteristic: geographic location (country and/or sea)

text: Kilkis

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: Homo sapiens

text: male

characteristic: host sex

characteristic: host subject id

text: RNA

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: General hospital of Goumenissa

characteristic: collecting institution

text: not provided

characteristic: description

text: Greece

text: Goumenissa

text: human

text: not provided

text: Homo sapiens

text: female

text: RNA


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Department of Microbiology, Medical School, Aristotle University of Thessaloniki, Thessaloniki, Greece

text: not provided

characteristic: collector name

characteristic: common name

text: Greece

text: Chalkidiki

text: human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: RNA

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

text: public

text: not provided

text: Greece

characteristic: geographic location (country and/or sea)

text: Giannitsa

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

characteristic: host subject id

text: RNA

characteristic: sample capture status


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: not provided

characteristic: description

text: Greece

text: Kria Vrisi

text: human

text: not provided

text: Homo sapiens

text: not provided

text: RNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: General hospital of Goumenissa

text: not provided

characteristic: collector name

characteristic: common name

text: Greece

text: Kilkis

text: human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

text: RNA

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: General hospital of Goumenissa

text: not provided

text: Greece

characteristic: geographic location (country and/or sea)

text: Goumenissa

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

text: Homo sapiens

text: male

characteristic: host sex

characteristic: host subject id

text: RNA

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Theageneio Hospital of Thessaloniki

characteristic: collecting institution

text: not provided

characteristic: description

text: Greece

text: Thessaloniki

text: human

text: not provided

text: Homo sapiens

text: not provided

text: RNA


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Anthony Smith, NICD

text: public

tag: Namespace:Anthony Smith, NICD

text: EnteroBase

characteristic: broker name

text: EnteroBase

text: A. Smith, National Institute for Communicable Diseases

text: Whole genome sequencing data uploaded by EnteroBase user

text: South Africa, Western Cape

characteristic: geographic location

text: Human, Stool

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Newport

characteristic: serovar

characteristic: strain

characteristic: title


characteristic: ENA-CHECKLIST

text: Anthony Smith, NICD

characteristic: INSDC center name

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Eastern Cape

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis


characteristic: ENA-FIRST-PUBLIC

text: Anthony Smith, NICD

characteristic: INSDC first public

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Western Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis


text: Anthony Smith, NICD

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: EnteroBase

text: EnteroBase

text: South Africa, Eastern Cape

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Dublin


text: Anthony Smith, NICD

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: EnteroBase

text: EnteroBase

text: South Africa, Eastern Cape

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Alachua


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

characteristic: description

text: South Africa, Eastern Cape

text: Human, Other

text: Salmonella enterica

text: Salmonella enterica

text: Dublin


characteristic: ENA-LAST-UPDATE

text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Eastern Cape

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Typhimurium


characteristic: External Id

text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Western Cape

text: Human, Other

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis


text: Anthony Smith, NICD

text: public

text: EnteroBase

characteristic: broker name

text: EnteroBase

text: South Africa, Gauteng

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Typhimurium


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Eastern Cape

characteristic: geographic location

text: Human, Urine

text: Salmonella enterica

text: Salmonella enterica

text: Typhimurium


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Northern Cape

text: Human, Stool

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Poona


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Western Cape

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Typhimurium

characteristic: serovar


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Western Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Muenchen

characteristic: strain


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Western Cape

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis

characteristic: title


characteristic: ENA-CHECKLIST

text: Istituto Italiano di Tecnologia - I

text: public

tag: Namespace:Istituto Italiano di Tecnologia - I

text: Riccardo Jesu

text: Acquario di Genova

characteristic: collecting institution

characteristic: collection date

text: Pyxis arachnoides arachnoides Male individual 06

text: Madagascar

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Coastal region of southwestern Madagascar

characteristic: geographic location (region and locality)

text: Spiny forest

characteristic: habitat

text: adult

characteristic: lifestage

text: Pyxis arachnoides arachnoides

text: Whole blood

characteristic: organism part

text: ORG.one

characteristic: project name

text: Pyxis arachnoides arachnoides

text: Male

characteristic: sex


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Istituto Italiano di Tecnologia - I

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Riccardo Jesu

text: Acquario di Genova

text: Pyxis arachnoides arachnoides Male individual 12

characteristic: description

text: Italy

text: Genoa (Captive Hatch)

text: Artificial Habitat

text: adult

text: Pyxis arachnoides arachnoides

text: Whole blood

text: ORG.one

text: Pyxis arachnoides arachnoides

text: Male


characteristic: ENA-CHECKLIST

text: SC

text: public

text: SC

characteristic: broker name

text: Lighthouse Lab in Glasgow

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Samples prepared at Lighthouse Lab in Glasgow by Harper VanSteenhouse, Yumi Kasai, David Gray, Carol Clugston, Anna Dominiczak and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SC

text: Rosalind Franklin Laboratory

text: not provided

text: Samples prepared at Rosalind Franklin Laboratory by Donald Fraser, Suki Lee, Rob Howes, The Rosalind Franklin Laboratory and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

text: United Kingdom

text: Wales

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Human

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

text: SC

text: public

text: SC

characteristic: broker name

text: Rosalind Franklin Laboratory

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: SC

text: Rosalind Franklin Laboratory

text: not provided

text: United Kingdom

text: Scotland

text: Human

text: not provided

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Lighthouse Lab in Glasgow

characteristic: collecting institution

characteristic: collection date

text: not provided

text: United Kingdom

text: Scotland

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Human

text: not provided

text: not provided

text: not provided


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

tag: Namespace:Okinawa Institute of Science and Technology Graduate University (OIST)

text: C. Cañestro, Barcelona University, Spain

text: High-molecular weight DNA extracted from a male individual (ID: Bar2) of the Oikopleura dioica species of zooplankton. The individual was related to a laboratory strain established from a mediterranean population near Barcelona, Spain.

characteristic: description

text: adult

text: Spain

characteristic: geographic location (country and/or sea)

text: Mediterranean sea, near Barcelona, Spain

text: Laboratory strain cultivated at the C. Cañestro laboratory, Barcelona University

text: Oikopleura dioica

text: Oikopleura dioica

text: male

characteristic: sex

text: Genomic DNA from a single Oikopleura dioica male (Bar2)


characteristic: ENA-CHECKLIST

text: Okinawa Institute of Science and Technology Graduate University (OIST)

text: public

text: A. Nishino, Hirosaki University, Japan

text: High-molecular weight DNA extracted from a male wild-type individual (ID: AOM-5) of the Oikopleura dioica species of zooplankton, sampled from the Aomori prefecture, Japan.

text: adult

text: Japan

text: Temperate North Pacific, Aomori prefecture, Japan

text: Wild population in the Aomori prefecture, Japan

text: Oikopleura dioica

characteristic: organism

text: Oikopleura dioica

text: male

text: Genomic DNA from a single Oikopleura dioica male (AOM-5)

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: A. Nishino, Hirosaki University, Japan

text: High-molecular weight DNA extracted from a male wild-type individual (ID: AOM-10) of the Oikopleura dioica species of zooplankton, sampled from the Aomori prefecture, Japan.

text: adult

text: Japan

text: Oikopleura dioica

text: Oikopleura dioica

text: male

text: Genomic DNA from a single Oikopleura dioica male (AOM-10)


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Aki Masunaga, Okinawa Institute of Science and Technology Graduate University, Japan

text: High-molecular weight DNA extracted from a male individual (ID: O9) of the Oikopleura dioica species of zooplankton. The individual was related to the laboratory strain established from a western Japanese population that was used to produce the OSKA2016 reference genome (data released elsewhere).

text: adult

text: Japan

text: Temperate North Pacific, Hyogo prefecture, Japan

text: Laboratory strain provided by H. Nishida, Osaka University

text: Oikopleura dioica

text: Oikopleura dioica

text: male

text: Genomic DNA from a single Oikopleura dioica male (O9)


text: public

text: High-molecular weight DNA extracted from a male wild-type individual (ID: KUM-M3) of the Oikopleura dioica species of zooplankton, sampled from the Kume island, Okinawa prefecture, Japan.

text: adult

text: Japan

text: Subtropical North Pacific, Okinawa prefecture, Japan

text: Wild population in the Okinawa prefecture, Japan

text: Oikopleura dioica

text: Oikopleura dioica

text: male

text: Genomic DNA from a single Oikopleura dioica male (KUM-M3)


text: HANYANG UNIVERSITY

text: public

tag: Namespace:HANYANG UNIVERSITY

text: fecal environment

characteristic: environment (biome)

text: feces

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: South Korea

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: Child gut microbiome

characteristic: project name

text: human gut metagenome

text: Illumina

characteristic: sequencing method

text: Child gut microbiome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: zenghp

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-02-09-2022-09:01:19:898-69048

text: human

characteristic: common name

text: gDNA

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: Female

characteristic: sex


text: zenghp

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-02-09-2022-09:01:19:898-69049

characteristic: Submitter Id

text: human

text: gDNA

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Female

characteristic: title


characteristic: GISAID Accession ID

text: public

tag: Namespace:Institute for Infectious Diseases, Bern, Switzerland

text: SIB

characteristic: broker name

text: MCL Medizinische Laboratorien, Hauptstandort Niederwangen; Niederwangen, Switzerland

characteristic: collecting institution

characteristic: collection date

text: Lea Stauber, Christian Baumann, Miguel A Terrazos Miani, Sonja Gempeler, Loïc Borcard, Stefan Neuenschwander, Cora Sägesser, Pascal Bittel, Peter Keller, Franziska Suter-Riniker, Stephen L Leib, Alban Ramette

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-8733-4822/2022

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute for Infectious Diseases, Bern, Switzerland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-8734-8347/2022


text: public

tag: Namespace:INTERDISCIPLINARY CENTRE OF MARINE AND ENVIRONMENT

text: In this study we present the evolution of the sole microbiome in a hatchery life cycle

characteristic: description

text: bacterium

characteristic: organism

text: bacterium

characteristic: title


text: INTERDISCIPLINARY CENTRE OF MARINE AND ENVIRONMENT

text: public

text: bacterium

text: bacterium

text: sole microbiome in a hatchery life cycle


text: zenghp

text: public

text: ena-SAMPLE-TAB-02-09-2022-10:37:05:695-69156

text: human

characteristic: common name

text: gDNA

text: Homo sapiens

text: Homo sapiens

text: Female

characteristic: sex


text: zenghp

text: public

text: ena-SAMPLE-TAB-02-09-2022-10:37:05:695-69158

text: human

text: gDNA

text: Homo sapiens

text: Homo sapiens

text: Male


text: zenghp

text: public

text: ena-SAMPLE-TAB-02-09-2022-10:37:05:695-69159

text: human

text: gDNA

text: Homo sapiens

text: Homo sapiens

text: Female


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/CE-NVRL-S22IRL00434826/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

text: Europe / Ireland / Clare

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CE-NVRL-S22IRL00435136/2022

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/CE-NVRL-S22IRL00435187/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

text: Europe / Ireland / Clare

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CE-NVRL-S22IRL00435126/2022

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/CE-NVRL-S22IRL00435193/2022

characteristic: virus identifier