characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF AMSTERDAM

text: public

text: Lieke E. Vlaar

text: thale cress

text: replicate 3, no solA, P starvation conditions

text: Netherlands

text: growth chamber

text: not published

characteristic: isolation and growth condition

text: 8h dark, 16h light

characteristic: light regimen

characteristic: mineral nutrient regimen

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis

characteristic: organism common name

characteristic: plant developmental stage

text: in vitro solid medium culture

characteristic: plant growth medium

characteristic: plant structure

text: 1g/L sucrose

characteristic: rooting medium carbon

characteristic: rooting medium macronutrients

characteristic: rooting medium micronutrients

text: After exactly 11 days growth, 2h treatment with 1% EtOH

characteristic: rooting medium regulators

text: 0.04% agar

characteristic: rooting medium solidifier

text: healthy

characteristic: sample health state

characteristic: sample storage temperature

text: Arabidopsis thaliana

characteristic: title


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF AMSTERDAM

characteristic: Submitter Id

characteristic: air temperature regimen

text: Lieke E. Vlaar

characteristic: collection date

text: thale cress

characteristic: common name

text: replicate 4, no solA, P starvation conditions

characteristic: description

characteristic: genotype

text: Netherlands

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

text: not published

text: 8h dark, 16h light

text: seedlings were grown for 10 days in replete medium, and then transferred to P starvation conditions

text: Arabidopsis thaliana

text: Arabidopsis

text: in vitro solid medium culture

text: 1g/L sucrose

text: first 10 days: 0.825 g/L NH4NO3, 0.22 g/L CaCl2·2H2O, 0.185 g/L MgSO4·7H2O, 0.95 g/L KNO3, 0.085 g/L KH2PO4. Then 26h: 0.825 g/L NH4NO3, 0.22 g/L CaCl2·2H2O, 0.185 g/L MgSO4·7H2O, 0.95 g/L KNO3, 0.932 g/L KCl

text: 20x diluted MS basal salt micronutrient solution (Merck, Darmstadt, Germany)

text: 0.04% agar

text: healthy

unit: °C

text: Arabidopsis thaliana


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF AMSTERDAM

text: public

text: Lieke E. Vlaar

text: thale cress

text: replicate 5, no solA, P starvation conditions

text: Netherlands

text: growth chamber

text: not published

characteristic: isolation and growth condition

text: 8h dark, 16h light

characteristic: light regimen

characteristic: mineral nutrient regimen

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis

characteristic: organism common name

characteristic: plant developmental stage

text: in vitro solid medium culture

characteristic: plant growth medium

characteristic: plant structure

text: 1g/L sucrose

characteristic: rooting medium carbon

characteristic: rooting medium macronutrients

characteristic: rooting medium micronutrients

characteristic: rooting medium regulators

text: 0.04% agar

characteristic: rooting medium solidifier

text: healthy

characteristic: sample health state

characteristic: sample storage temperature

text: Arabidopsis thaliana

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: air temperature regimen

text: Lieke E. Vlaar

characteristic: collection date

text: thale cress

characteristic: common name

text: replicate 1, treated with solA, P starvation conditions

characteristic: description

characteristic: genotype

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

text: not published

text: 8h dark, 16h light

text: Arabidopsis thaliana

text: Arabidopsis

text: in vitro solid medium culture

text: 1g/L sucrose

text: After exactly 11 days growth, 2h treatment with 5uM solanoeclepin in 1% EtOH

text: 0.04% agar

text: healthy

text: Arabidopsis thaliana


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF AMSTERDAM

text: public

text: Lieke E. Vlaar

text: thale cress

text: replicate 2, treated with solA, P starvation conditions

text: Netherlands

text: growth chamber

text: not published

characteristic: isolation and growth condition

text: 8h dark, 16h light

characteristic: light regimen

characteristic: mineral nutrient regimen

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis

characteristic: organism common name

characteristic: plant developmental stage

text: in vitro solid medium culture

characteristic: plant growth medium

characteristic: plant structure

text: 1g/L sucrose

characteristic: rooting medium carbon

text: first 10 days: 0.825 g/L NH4NO3, 0.22 g/L CaCl2·2H2O, 0.185 g/L MgSO4·7H2O, 0.95 g/L KNO3, 0.085 g/L KH2PO4. Then 26h:0.825 g/L NH4NO3, 0.22 g/L CaCl2·2H2O, 0.185 g/L MgSO4·7H2O, 0.95 g/L KNO3, 0.932 g/L KCl

characteristic: rooting medium macronutrients

characteristic: rooting medium micronutrients

characteristic: rooting medium regulators

text: 0.04% agar

characteristic: rooting medium solidifier

text: healthy

characteristic: sample health state

characteristic: sample storage temperature

text: Arabidopsis thaliana

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: air temperature regimen

text: Lieke E. Vlaar

characteristic: collection date

text: thale cress

characteristic: common name

text: replicate 3, treated with solA, P starvation conditions

characteristic: description

characteristic: genotype

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

text: not published

text: 8h dark, 16h light

text: Arabidopsis thaliana

text: Arabidopsis

text: in vitro solid medium culture

text: 1g/L sucrose

text: 0.04% agar

text: healthy

text: Arabidopsis thaliana


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF AMSTERDAM

text: public

text: Lieke E. Vlaar

text: thale cress

text: replicate 4, treated with solA, P starvation conditions

text: Netherlands

text: growth chamber

text: not published

characteristic: isolation and growth condition

text: 8h dark, 16h light

characteristic: light regimen

characteristic: mineral nutrient regimen

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis

characteristic: organism common name

characteristic: plant developmental stage

text: in vitro solid medium culture

characteristic: plant growth medium

characteristic: plant structure

text: 1g/L sucrose

characteristic: rooting medium carbon

characteristic: rooting medium macronutrients

characteristic: rooting medium micronutrients

characteristic: rooting medium regulators

text: 0.04% agar

characteristic: rooting medium solidifier

text: healthy

characteristic: sample health state

characteristic: sample storage temperature

text: Arabidopsis thaliana

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: air temperature regimen

text: Lieke E. Vlaar

characteristic: collection date

text: thale cress

characteristic: common name

text: replicate 5, treated with solA, P starvation conditions

characteristic: description

characteristic: genotype

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

text: not published

text: 8h dark, 16h light

text: Arabidopsis thaliana

text: Arabidopsis

text: in vitro solid medium culture

text: 1g/L sucrose

text: 0.04% agar

text: healthy

text: Arabidopsis thaliana


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF AMSTERDAM

text: public

text: Lieke E. Vlaar

text: thale cress

text: replicate 1, no solA, N+P starvation conditions

text: Netherlands

text: growth chamber

text: not published

characteristic: isolation and growth condition

text: 8h dark, 16h light

characteristic: light regimen

text: seedlings were grown for 10 days in replete medium, and then transferred to N+P starvation conditions

characteristic: mineral nutrient regimen

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis

characteristic: organism common name

characteristic: plant developmental stage

text: in vitro solid medium culture

characteristic: plant growth medium

characteristic: plant structure

text: 1g/L sucrose

characteristic: rooting medium carbon

text: first 10 days: 0.825 g/L NH4NO3, 0.22 g/L CaCl2·2H2O, 0.185 g/L MgSO4·7H2O, 0.95 g/L KNO3, 0.085 g/L KH2PO4. Then 26h: 0.22 g/L CaCl2·2H2O, 0.185 g/L MgSO4·7H2O, 0.397 g/L KCl

characteristic: rooting medium macronutrients

characteristic: rooting medium micronutrients

characteristic: rooting medium regulators

text: 0.04% agar

characteristic: rooting medium solidifier

text: healthy

characteristic: sample health state

characteristic: sample storage temperature

text: Arabidopsis thaliana

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: air temperature regimen

text: Lieke E. Vlaar

characteristic: collection date

text: thale cress

characteristic: common name

text: replicate 2, no solA, N+P starvation conditions

characteristic: description

characteristic: genotype

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

text: not published

text: 8h dark, 16h light

text: Arabidopsis thaliana

text: Arabidopsis

text: in vitro solid medium culture

text: 1g/L sucrose

text: 0.04% agar

text: healthy

text: Arabidopsis thaliana


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF AMSTERDAM

text: public

text: Lieke E. Vlaar

text: thale cress

text: replicate 3, no solA, N+P starvation conditions

text: Netherlands

text: growth chamber

text: not published

characteristic: isolation and growth condition

text: 8h dark, 16h light

characteristic: light regimen

characteristic: mineral nutrient regimen

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis

characteristic: organism common name

characteristic: plant developmental stage

text: in vitro solid medium culture

characteristic: plant growth medium

characteristic: plant structure

text: 1g/L sucrose

characteristic: rooting medium carbon

characteristic: rooting medium macronutrients

characteristic: rooting medium micronutrients

text: After exactly 11 days growth, 2h treatment with 1% EtOH

characteristic: rooting medium regulators

text: 0.04% agar

characteristic: rooting medium solidifier

text: healthy

characteristic: sample health state

characteristic: sample storage temperature

text: Arabidopsis thaliana

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: air temperature regimen

text: Lieke E. Vlaar

characteristic: collection date

text: thale cress

characteristic: common name

text: replicate 4, no solA, N+P starvation conditions

characteristic: description

characteristic: genotype

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

text: not published

text: 8h dark, 16h light

text: Arabidopsis thaliana

text: Arabidopsis

text: in vitro solid medium culture

text: 1g/L sucrose

text: 0.04% agar

text: healthy

text: Arabidopsis thaliana


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF AMSTERDAM

text: public

text: Lieke E. Vlaar

text: thale cress

text: replicate 5, no solA, N+P starvation conditions

text: Netherlands

text: growth chamber

text: not published

characteristic: isolation and growth condition

text: 8h dark, 16h light

characteristic: light regimen

characteristic: mineral nutrient regimen

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis

characteristic: organism common name

characteristic: plant developmental stage

text: in vitro solid medium culture

characteristic: plant growth medium

characteristic: plant structure

text: 1g/L sucrose

characteristic: rooting medium carbon

characteristic: rooting medium macronutrients

characteristic: rooting medium micronutrients

characteristic: rooting medium regulators

text: 0.04% agar

characteristic: rooting medium solidifier

text: healthy

characteristic: sample health state

characteristic: sample storage temperature

text: Arabidopsis thaliana

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: air temperature regimen

text: Lieke E. Vlaar

characteristic: collection date

text: thale cress

characteristic: common name

text: replicate 1, treated with solA, N+P starvation conditions

characteristic: description

characteristic: genotype

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

text: not published

text: 8h dark, 16h light

text: Arabidopsis thaliana

text: Arabidopsis

text: in vitro solid medium culture

text: 1g/L sucrose

text: 20x diluted MS basal salt micronutrient solution (Merck, Darmstadt, Germany)

text: After exactly 11 days growth, 2h treatment with 5uM solanoeclepin A in 1% EtOH

text: 0.04% agar

text: healthy

text: Arabidopsis thaliana


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF AMSTERDAM

text: public

text: Lieke E. Vlaar

text: thale cress

text: replicate 2, treated with solA, N+P starvation conditions

text: Netherlands

text: growth chamber

text: not published

characteristic: isolation and growth condition

text: 8h dark, 16h light

characteristic: light regimen

characteristic: mineral nutrient regimen

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis

characteristic: organism common name

characteristic: plant developmental stage

text: in vitro solid medium culture

characteristic: plant growth medium

characteristic: plant structure

text: 1g/L sucrose

characteristic: rooting medium carbon

text: first 10 days: 0.825 g/L NH4NO3, 0.22 g/L CaCl2·2H2O, 0.185 g/L MgSO4·7H2O, 0.95 g/L KNO3, 0.085 g/L KH2PO4. Then 26h:0.22 g/L CaCl2·2H2O, 0.185 g/L MgSO4·7H2O, 0.397 g/L KCl

characteristic: rooting medium macronutrients

characteristic: rooting medium micronutrients

characteristic: rooting medium regulators

text: 0.04% agar

characteristic: rooting medium solidifier

text: healthy

characteristic: sample health state

characteristic: sample storage temperature

text: Arabidopsis thaliana

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: air temperature regimen

text: Lieke E. Vlaar

characteristic: collection date

text: thale cress

characteristic: common name

text: replicate 3, treated with solA, N+P starvation conditions

characteristic: description

characteristic: genotype

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

text: not published

text: 8h dark, 16h light

text: Arabidopsis thaliana

text: Arabidopsis

text: in vitro solid medium culture

text: 1g/L sucrose

text: 0.04% agar

text: healthy

text: Arabidopsis thaliana


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF AMSTERDAM

text: public

text: Lieke E. Vlaar

text: thale cress

text: replicate 4, treated with solA, N+P starvation conditions

text: Netherlands

text: growth chamber

text: not published

characteristic: isolation and growth condition

text: 8h dark, 16h light

characteristic: light regimen

characteristic: mineral nutrient regimen

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis

characteristic: organism common name

characteristic: plant developmental stage

text: in vitro solid medium culture

characteristic: plant growth medium

characteristic: plant structure

text: 1g/L sucrose

characteristic: rooting medium carbon

characteristic: rooting medium macronutrients

characteristic: rooting medium micronutrients

characteristic: rooting medium regulators

text: 0.04% agar

characteristic: rooting medium solidifier

text: healthy

characteristic: sample health state

characteristic: sample storage temperature

text: Arabidopsis thaliana

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: air temperature regimen

text: Lieke E. Vlaar

characteristic: collection date

text: thale cress

characteristic: common name

text: replicate 5, treated with solA, N+P starvation conditions

characteristic: description

characteristic: genotype

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

text: not published

text: 8h dark, 16h light

text: Arabidopsis thaliana

text: Arabidopsis

text: in vitro solid medium culture

text: 1g/L sucrose

text: 0.04% agar

text: healthy

text: Arabidopsis thaliana


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF AMSTERDAM

text: public

text: Lieke E. Vlaar

text: thale cress

text: replicate 1, no solA, N starvation conditions

text: Netherlands

text: growth chamber

text: not published

characteristic: isolation and growth condition

text: 8h dark, 16h light

characteristic: light regimen

text: seedlings were grown for 10 days in replete medium, and then transferred to N starvation conditions

characteristic: mineral nutrient regimen

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis

characteristic: organism common name

characteristic: plant developmental stage

text: in vitro solid medium culture

characteristic: plant growth medium

characteristic: plant structure

text: 1g/L sucrose

characteristic: rooting medium carbon

text: first 10 days: 0.825 g/L NH4NO3, 0.22 g/L CaCl2·2H2O, 0.185 g/L MgSO4·7H2O, 0.95 g/L KNO3, 0.085 g/L KH2PO4. Then 26h: 0.22 g/L CaCl2·2H2O, 0.185 g/L MgSO4·7H2O, 0.085 g/L KH2PO4, 0.35 g/L KCl

characteristic: rooting medium macronutrients

characteristic: rooting medium micronutrients

characteristic: rooting medium regulators

text: 0.04% agar

characteristic: rooting medium solidifier

text: healthy

characteristic: sample health state

characteristic: sample storage temperature

text: Arabidopsis thaliana

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: air temperature regimen

text: Lieke E. Vlaar

characteristic: collection date

text: thale cress

characteristic: common name

text: replicate 2, no solA, N starvation conditions

characteristic: description

characteristic: genotype

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

text: not published

text: 8h dark, 16h light

text: Arabidopsis thaliana

text: Arabidopsis

text: in vitro solid medium culture

text: 1g/L sucrose

text: 0.04% agar

text: healthy

text: Arabidopsis thaliana


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF AMSTERDAM

text: public

text: Lieke E. Vlaar

text: thale cress

text: replicate 3, no solA, N starvation conditions

text: Netherlands

text: growth chamber

text: not published

characteristic: isolation and growth condition

text: 8h dark, 16h light

characteristic: light regimen

characteristic: mineral nutrient regimen

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis

characteristic: organism common name

characteristic: plant developmental stage

text: in vitro solid medium culture

characteristic: plant growth medium

characteristic: plant structure

text: 1g/L sucrose

characteristic: rooting medium carbon

characteristic: rooting medium macronutrients

characteristic: rooting medium micronutrients

characteristic: rooting medium regulators

text: 0.04% agar

characteristic: rooting medium solidifier

text: healthy

characteristic: sample health state

characteristic: sample storage temperature

text: Arabidopsis thaliana

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: air temperature regimen

text: Lieke E. Vlaar

characteristic: collection date

text: thale cress

characteristic: common name

text: replicate 4, no solA, N starvation conditions

characteristic: description

characteristic: genotype

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

text: not published

text: 8h dark, 16h light

text: Arabidopsis thaliana

text: Arabidopsis

text: in vitro solid medium culture

text: 1g/L sucrose

text: 0.04% agar

text: healthy

text: Arabidopsis thaliana


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF AMSTERDAM

text: public

text: Lieke E. Vlaar

text: thale cress

text: replicate 5, no solA, N starvation conditions

text: Netherlands

text: growth chamber

text: not published

characteristic: isolation and growth condition

text: 8h dark, 16h light

characteristic: light regimen

characteristic: mineral nutrient regimen

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis

characteristic: organism common name

characteristic: plant developmental stage

text: in vitro solid medium culture

characteristic: plant growth medium

characteristic: plant structure

text: 1g/L sucrose

characteristic: rooting medium carbon

characteristic: rooting medium macronutrients

characteristic: rooting medium micronutrients

text: After exactly 11 days growth, 2h treatment with 1% EtOH

characteristic: rooting medium regulators

text: 0.04% agar

characteristic: rooting medium solidifier

text: healthy

characteristic: sample health state

characteristic: sample storage temperature

text: Arabidopsis thaliana

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: air temperature regimen

text: after 14 days, 1% EtOH was administered for 2h before harvest

characteristic: chemical administration

characteristic: collection date

text: tomato

characteristic: common name

text: 1/2 MS

characteristic: culture rooting medium

text: replicate 1, no solA, root

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

text: 1/2 MS for 14 days post germination

text: 8h dark, 16h light

text: Solanum lycopersicum

text: Tomato

text: in vitro solid medium

text: 1 mL or solid medium per plant. 1 sample = 1 seedling

characteristic: rooting conditions

text: 0.825 g/L NH4NO3, 0.22 g/L CaCl2·2H2O, 0.185 g/L MgSO4·7H2O, 0.95 g/L KNO3, 0.085 g/L KH2PO4

text: 0.04% agar

text: healthy

text: Solanum lycopersicum

text: Moneymaker

characteristic: subspecific genetic lineage rank


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: tomato

text: 1/2 MS

text: replicate 2, no solA, root

text: Netherlands

text: growth chamber

text: 1/2 MS for 14 days post germination

characteristic: isolation and growth condition

text: 8h dark, 16h light

characteristic: light regimen

text: Solanum lycopersicum

characteristic: organism

text: Tomato

characteristic: organism common name

characteristic: plant developmental stage

text: in vitro solid medium

characteristic: plant growth medium

characteristic: plant structure

characteristic: rooting medium macronutrients

text: 20x diluted MS basal salt micronutrient solution (Merck, Darmstadt, Germany)

characteristic: rooting medium micronutrients

text: 0.04% agar

characteristic: rooting medium solidifier

text: healthy

characteristic: sample health state

text: Solanum lycopersicum

text: Moneymaker

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: air temperature regimen

characteristic: chemical administration

characteristic: collection date

text: tomato

characteristic: common name

text: 1/2 MS

characteristic: culture rooting medium

text: replicate 3, no solA, root

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

text: 1/2 MS for 14 days post germination

text: 8h dark, 16h light

text: Solanum lycopersicum

text: Tomato

text: in vitro solid medium

characteristic: rooting conditions

text: 0.04% agar

text: healthy

text: Solanum lycopersicum

text: Moneymaker

characteristic: subspecific genetic lineage rank


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: tomato

text: 1/2 MS

text: replicate 4, no solA, root

text: Netherlands

text: growth chamber

text: 1/2 MS for 14 days post germination

characteristic: isolation and growth condition

text: 8h dark, 16h light

characteristic: light regimen

text: Solanum lycopersicum

characteristic: organism

text: Tomato

characteristic: organism common name

characteristic: plant developmental stage

text: in vitro solid medium

characteristic: plant growth medium

characteristic: plant structure

characteristic: rooting medium macronutrients

characteristic: rooting medium micronutrients

text: 0.04% agar

characteristic: rooting medium solidifier

text: healthy

characteristic: sample health state

text: Solanum lycopersicum

text: Moneymaker

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: air temperature regimen

characteristic: chemical administration

characteristic: collection date

text: tomato

characteristic: common name

text: 1/2 MS

characteristic: culture rooting medium

text: replicate 5, no solA, root

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

text: 1/2 MS for 14 days post germination

text: 8h dark, 16h light

text: Solanum lycopersicum

text: Tomato

text: in vitro solid medium

characteristic: rooting conditions

text: 0.04% agar

text: healthy

text: Solanum lycopersicum

text: Moneymaker

characteristic: subspecific genetic lineage rank


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: tomato

text: 1/2 MS

text: replicate 1, no solA, shoot

text: Netherlands

text: growth chamber

text: 1/2 MS for 14 days post germination

characteristic: isolation and growth condition

text: 8h dark, 16h light

characteristic: light regimen

text: Solanum lycopersicum

characteristic: organism

text: Tomato

characteristic: organism common name

characteristic: plant developmental stage

text: in vitro solid medium

characteristic: plant growth medium

characteristic: plant structure

characteristic: rooting medium macronutrients

characteristic: rooting medium micronutrients

text: 0.04% agar

characteristic: rooting medium solidifier

text: healthy

characteristic: sample health state

text: Solanum lycopersicum

text: Moneymaker

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: air temperature regimen

characteristic: chemical administration

characteristic: collection date

text: tomato

characteristic: common name

text: 1/2 MS

characteristic: culture rooting medium

text: replicate 2, no solA, shoot

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

text: 1/2 MS for 14 days post germination

text: 8h dark, 16h light

text: Solanum lycopersicum

text: Tomato

text: in vitro solid medium

characteristic: rooting conditions

text: 0.04% agar

text: healthy

text: Solanum lycopersicum

text: Moneymaker

characteristic: subspecific genetic lineage rank


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: tomato

text: 1/2 MS

text: replicate 3, no solA, shoot

text: Netherlands

text: growth chamber

text: 1/2 MS for 14 days post germination

characteristic: isolation and growth condition

text: 8h dark, 16h light

characteristic: light regimen

text: Solanum lycopersicum

characteristic: organism

text: Tomato

characteristic: organism common name

characteristic: plant developmental stage

text: in vitro solid medium

characteristic: plant growth medium

characteristic: plant structure

characteristic: rooting medium macronutrients

characteristic: rooting medium micronutrients

text: 0.04% agar

characteristic: rooting medium solidifier

text: healthy

characteristic: sample health state

text: Solanum lycopersicum

text: Moneymaker

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: air temperature regimen

characteristic: chemical administration

characteristic: collection date

text: tomato

characteristic: common name

text: 1/2 MS

characteristic: culture rooting medium

text: replicate 4, no solA, shoot

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

text: 1/2 MS for 14 days post germination

text: 8h dark, 16h light

text: Solanum lycopersicum

text: Tomato

text: in vitro solid medium

characteristic: rooting conditions

text: 0.04% agar

text: healthy

text: Solanum lycopersicum

text: Moneymaker

characteristic: subspecific genetic lineage rank


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: tomato

text: 1/2 MS

text: replicate 5, no solA, shoot

text: Netherlands

text: growth chamber

text: 1/2 MS for 14 days post germination

characteristic: isolation and growth condition

text: 8h dark, 16h light

characteristic: light regimen

text: Solanum lycopersicum

characteristic: organism

text: Tomato

characteristic: organism common name

characteristic: plant developmental stage

text: in vitro solid medium

characteristic: plant growth medium

characteristic: plant structure

characteristic: rooting medium macronutrients

characteristic: rooting medium micronutrients

text: 0.04% agar

characteristic: rooting medium solidifier

text: healthy

characteristic: sample health state

text: Solanum lycopersicum

text: Moneymaker

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: air temperature regimen

text: after 14 days, 5uM solanoeclepin A in 1% EtOH was administered for 2h before harvest

characteristic: chemical administration

characteristic: collection date

text: tomato

characteristic: common name

text: 1/2 MS

characteristic: culture rooting medium

text: replicate 1, treated with solA, root

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

text: 1/2 MS for 14 days post germination

text: 8h dark, 16h light

text: Solanum lycopersicum

text: Tomato

text: in vitro solid medium

characteristic: rooting conditions

text: 0.04% agar

text: healthy

text: Solanum lycopersicum

text: Moneymaker

characteristic: subspecific genetic lineage rank


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: tomato

text: 1/2 MS

text: replicate 2, treated with solA, root

text: Netherlands

text: growth chamber

text: 1/2 MS for 14 days post germination

characteristic: isolation and growth condition

text: 8h dark, 16h light

characteristic: light regimen

text: Solanum lycopersicum

characteristic: organism

text: Tomato

characteristic: organism common name

characteristic: plant developmental stage

text: in vitro solid medium

characteristic: plant growth medium

characteristic: plant structure

characteristic: rooting medium macronutrients

characteristic: rooting medium micronutrients

text: 0.04% agar

characteristic: rooting medium solidifier

text: healthy

characteristic: sample health state

text: Solanum lycopersicum

text: Moneymaker

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: air temperature regimen

characteristic: chemical administration

characteristic: collection date

text: tomato

characteristic: common name

text: 1/2 MS

characteristic: culture rooting medium

text: replicate 3, treated with solA, root

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

text: 1/2 MS for 14 days post germination

text: 8h dark, 16h light

text: Solanum lycopersicum

text: Tomato

text: in vitro solid medium

characteristic: rooting conditions

text: 0.04% agar

text: healthy

text: Solanum lycopersicum

text: Moneymaker

characteristic: subspecific genetic lineage rank


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: tomato

text: 1/2 MS

text: replicate 4, treated with solA, root

text: Netherlands

text: growth chamber

text: 1/2 MS for 14 days post germination

characteristic: isolation and growth condition

text: 8h dark, 16h light

characteristic: light regimen

text: Solanum lycopersicum

characteristic: organism

text: Tomato

characteristic: organism common name

characteristic: plant developmental stage

text: in vitro solid medium

characteristic: plant growth medium

characteristic: plant structure

characteristic: rooting medium macronutrients

characteristic: rooting medium micronutrients

text: 0.04% agar

characteristic: rooting medium solidifier

text: healthy

characteristic: sample health state

text: Solanum lycopersicum

text: Moneymaker

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: air temperature regimen

characteristic: chemical administration

characteristic: collection date

text: tomato

characteristic: common name

text: 1/2 MS

characteristic: culture rooting medium

text: replicate 5, treated with solA, root

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

text: 1/2 MS for 14 days post germination

text: 8h dark, 16h light

text: Solanum lycopersicum

text: Tomato

text: in vitro solid medium

characteristic: rooting conditions

text: 0.04% agar

text: healthy

text: Solanum lycopersicum

text: Moneymaker

characteristic: subspecific genetic lineage rank


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: tomato

text: 1/2 MS

text: replicate 1, treated with solA, shoot

text: Netherlands

text: growth chamber

text: 1/2 MS for 14 days post germination

characteristic: isolation and growth condition

text: 8h dark, 16h light

characteristic: light regimen

text: Solanum lycopersicum

characteristic: organism

text: Tomato

characteristic: organism common name

characteristic: plant developmental stage

text: in vitro solid medium

characteristic: plant growth medium

characteristic: plant structure

characteristic: rooting medium macronutrients

characteristic: rooting medium micronutrients

text: 0.04% agar

characteristic: rooting medium solidifier

text: healthy

characteristic: sample health state

text: Solanum lycopersicum

text: Moneymaker

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: air temperature regimen

characteristic: chemical administration

characteristic: collection date

text: tomato

characteristic: common name

text: 1/2 MS

characteristic: culture rooting medium

text: replicate 2, treated with solA, shoot

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

text: 1/2 MS for 14 days post germination

text: 8h dark, 16h light

text: Solanum lycopersicum

text: Tomato

text: in vitro solid medium

characteristic: rooting conditions

text: 0.04% agar

text: healthy

text: Solanum lycopersicum

text: Moneymaker

characteristic: subspecific genetic lineage rank


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: tomato

text: 1/2 MS

text: replicate 3, treated with solA, shoot

text: Netherlands

text: growth chamber

text: 1/2 MS for 14 days post germination

characteristic: isolation and growth condition

text: 8h dark, 16h light

characteristic: light regimen

text: Solanum lycopersicum

characteristic: organism

text: Tomato

characteristic: organism common name

characteristic: plant developmental stage

text: in vitro solid medium

characteristic: plant growth medium

characteristic: plant structure

characteristic: rooting medium macronutrients

characteristic: rooting medium micronutrients

text: 0.04% agar

characteristic: rooting medium solidifier

text: healthy

characteristic: sample health state

text: Solanum lycopersicum

text: Moneymaker

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: air temperature regimen

characteristic: chemical administration

characteristic: collection date

text: tomato

characteristic: common name

text: 1/2 MS

characteristic: culture rooting medium

text: replicate 4, treated with solA, shoot

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: growth chamber

characteristic: growth facility

text: 1/2 MS for 14 days post germination

text: 8h dark, 16h light

text: Solanum lycopersicum

text: Tomato

text: in vitro solid medium

characteristic: rooting conditions

text: 0.04% agar

text: healthy

text: Solanum lycopersicum

text: Moneymaker

characteristic: subspecific genetic lineage rank


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF AMSTERDAM

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: tomato

text: 1/2 MS

text: replicate 5, treated with solA, shoot

text: Netherlands

text: growth chamber

text: 1/2 MS for 14 days post germination

characteristic: isolation and growth condition

text: 8h dark, 16h light

characteristic: light regimen

text: Solanum lycopersicum

characteristic: organism

text: Tomato

characteristic: organism common name

characteristic: plant developmental stage

text: in vitro solid medium

characteristic: plant growth medium

characteristic: plant structure

characteristic: rooting medium macronutrients

characteristic: rooting medium micronutrients

text: 0.04% agar

characteristic: rooting medium solidifier

text: healthy

characteristic: sample health state

text: Solanum lycopersicum

text: Moneymaker

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF MAINZ

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF MAINZ

characteristic: Submitter Id

text: Germany

characteristic: geographic location (country and/or sea)

text: Gimbsheim

characteristic: geographic location (region and locality)

text: Barbus barbus

characteristic: host scientific name

text: Pomphorhynchus laevis

text: Pomphorhynchus laevis

text: female

characteristic: sex

text: RNA-Seq host-dependent parasite maturation


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF MAINZ

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Germany

text: Gimbsheim

text: Barbus barbus

text: Pomphorhynchus laevis

characteristic: organism

text: Pomphorhynchus laevis

text: male


text: UNIVERSITY OF MAINZ

text: public

text: Germany

text: Gieselwerder

text: Anguilla anguilla

text: Pomphorhynchus laevis

text: Pomphorhynchus laevis

text: female


text: UNIVERSITY OF MAINZ

text: public

text: Germany

text: Gieselwerder

text: Anguilla anguilla

text: Pomphorhynchus laevis

text: Pomphorhynchus laevis

text: male


E-MTAB-10853:Sample 2

text: UNIVERSITY OF CAMBRIDGE

text: public

text: E-MTAB-10853:Sample 2

tag: Namespace:UNIVERSITY OF CAMBRIDGE

unit: week

characteristic: age

text: ArrayExpress

characteristic: broker name

text: bone marrow cell

text: house mouse

characteristic: common name

text: Protocols: Bone marrow cells were harvested from individual animals and were stored at -150C. Samples were prepared upon thawing and FACS sorted on the basis of GFP positive (marker of RUNX1-RUNX1T1(9a)) and c-Kit (marker of early progenitors) standard protocol as per 10X genomics v2 kit was followed standard protocol as per 10X genomics v2 kit was followed

characteristic: description

text: adult

characteristic: developmental stage

text: Kat2a fl/fl Mx1-Cre+/-

characteristic: genotype

text: injected into irradiated C57BL/6 mice

characteristic: growth condition

text: c-Kit positive, GFP positive

characteristic: immunophenotype

text: Mus musculus

text: Mus musculus

text: bone marrow

characteristic: organism part

text: Kat2a knockout

characteristic: phenotype

text: Mus musculus

text: female

characteristic: strain

text: Sample 2


E-MTAB-10853:Sample 4

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10853:Sample 4

characteristic: Submitter Id

text: ArrayExpress

text: bone marrow cell

text: house mouse

text: adult

text: Kat2a fl/fl Mx1-Cre+/-

text: injected into irradiated C57BL/6 mice

text: c-Kit positive, GFP positive

text: Mus musculus

text: Mus musculus

text: bone marrow

text: Kat2a knockout

text: Mus musculus

text: female

characteristic: sex

text: Sample 4

characteristic: title


E-MTAB-10853:Sample 1

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-10853:Sample 1

characteristic: age

text: ArrayExpress

characteristic: broker name

text: bone marrow cell

text: house mouse

characteristic: common name

text: adult

text: Kat2a fl/fl Mx1-Cre-/-

text: injected into irradiated C57BL/6 mice

text: c-Kit positive, GFP positive

text: Mus musculus

characteristic: organism

text: Mus musculus

text: bone marrow

text: wild type

text: Mus musculus

text: female

text: Sample 1


E-MTAB-10853:Sample 3

text: UNIVERSITY OF CAMBRIDGE

text: public

text: E-MTAB-10853:Sample 3

text: ArrayExpress

text: bone marrow cell

text: house mouse

characteristic: description

text: adult

characteristic: developmental stage

text: Kat2a fl/fl Mx1-Cre-/-

characteristic: genotype

text: injected into irradiated C57BL/6 mice

characteristic: growth condition

text: c-Kit positive, GFP positive

characteristic: immunophenotype

text: Mus musculus

text: Mus musculus

text: bone marrow

characteristic: organism part

text: wild type

characteristic: phenotype

text: Mus musculus

text: female

characteristic: strain

text: Sample 3


text: Streptococcus agalactiae)

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Streptococcus agalactiae)

text: Streptococcus agalactiae

text: Streptococcus agalactiae

characteristic: title


text: Streptococcus agalactiae)

characteristic: ArrayExpress-Species

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Streptococcus agalactiae)

characteristic: common name

text: Streptococcus agalactiae

characteristic: organism

text: Streptococcus agalactiae


text: Streptococcus agalactiae)

text: SC

text: public

text: Streptococcus agalactiae)

text: Streptococcus agalactiae

text: Streptococcus agalactiae


text: Mouse Cell-line

characteristic: ArrayExpress-PHENOTYPE

text: unknown

characteristic: ArrayExpress-SEX

text: Unknown

characteristic: GENDER

text: SC

text: public

text: Mouse Cell-line

characteristic: PHENOTYPE

text: house mouse

text: Mus musculus

text: Mus musculus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

tag: Namespace:Centre for Genomic Regulation (CRG), The Barcelona Institute for Science and Technology (BIST), Barcelona , Catalonia, Spain.

unit: hour

characteristic: age

text: ArrayExpress

characteristic: broker name

text: fruit fly

text: Protocols: Imaginal tissues were dissected in PBS 1x and incubated for 1h in a 10x trypsin solution (Sigma T4174) at room temperature in a rotating wheel. Cells were vigorously pipetted and kept on ice in Schneider’s insect medium. To discard dead cells, DAPI was added to the sample at 1 μg/mL final concentration. Cells were sorted in a FACSAria (BD) with the 85 μm nozzle Imaginal tissues were dissected in PBS 1x Flies were grown in standard media at 25ºC. RNA from sorted cells was extracted with ZR-RNA MicroPrep Kit from Zymo Research following the manufacturer’s instructions Sequencing libraries were prepared using TruSeq Stranded mRNA Library Preparation Kit from Illumina and following the manufacturer’s instructions.

characteristic: description

text: third instar larva stage

characteristic: developmental stage

text: w-; p{GawB}rn[GAL4-5]/UAS-GFP

characteristic: genotype

text: GFP-positive

characteristic: immunophenotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: antennal disc

characteristic: organism part

text: Drosophila melanogaster

text: mixed

characteristic: sex


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Centre for Genomic Regulation (CRG), The Barcelona Institute for Science and Technology (BIST), Barcelona , Catalonia, Spain.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: fruit fly

text: third instar larva stage

text: w-; p{GawB}rn[GAL4-5]/UAS-GFP

text: GFP-positive

text: Drosophila melanogaster

text: Drosophila melanogaster

text: antennal disc

text: Drosophila melanogaster

text: mixed

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: age

text: ArrayExpress

text: fruit fly

characteristic: common name

text: pupal stage

text: w-; p{GawB}rn[GAL4-5]/UAS-GFP

text: GFP-positive

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: antennal disc

text: Drosophila melanogaster

text: mixed


text: public

text: ArrayExpress

characteristic: broker name

text: fruit fly

characteristic: description

text: third instar larva stage

characteristic: developmental stage

text: w-; en-GAL4:UAS-GFP/+

characteristic: genotype

text: GFP-positive

characteristic: immunophenotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: wing disc anterior compartment

text: Drosophila melanogaster

text: mixed


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: ArrayExpress

text: fruit fly

text: pupal stage

text: w-; en-GAL4:UAS-GFP/+

text: GFP-positive

text: Drosophila melanogaster

text: Drosophila melanogaster

text: wing disc anterior compartment

characteristic: organism part

text: Drosophila melanogaster

text: mixed

characteristic: sex


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: fruit fly

text: third instar larva stage

text: w-; ap-GAL4:UAS-GFP/+

text: GFP-positive

text: Drosophila melanogaster

text: Drosophila melanogaster

text: wing disc dorsal compartment

text: Drosophila melanogaster

text: mixed


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: age

text: ArrayExpress

text: fruit fly

characteristic: common name

text: pupal stage

text: w-; ap-GAL4:UAS-GFP/+

text: GFP-positive

text: Drosophila melanogaster

text: Drosophila melanogaster

text: wing disc dorsal compartment

text: Drosophila melanogaster

text: mixed

characteristic: title


text: public

text: ArrayExpress

characteristic: broker name

text: fruit fly

characteristic: description

text: third instar larva stage

characteristic: developmental stage

text: w-; GMR-GAL4/+;UAS-GFP/+

characteristic: genotype

text: GFP-positive

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: eye disc

text: Drosophila melanogaster

text: mixed


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: ArrayExpress

text: fruit fly

text: pupal stage

text: w-; GMR-GAL4/+;UAS-GFP/+

text: GFP-positive

characteristic: immunophenotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: eye disc

characteristic: organism part

text: Drosophila melanogaster

text: mixed


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: fruit fly

text: third instar larva stage

text: w-; ubiRFP/+;p{GawB}C68a/+;UAS-GFP/+

text: GFP-positive

text: Drosophila melanogaster

text: Drosophila melanogaster

text: female genital disc

text: Drosophila melanogaster

text: female

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: fruit fly

characteristic: common name

text: pupal stage

text: w-; ubiRFP/+;p{GawB}C68a/+;UAS-GFP/+

text: GFP-positive

text: Drosophila melanogaster

text: Drosophila melanogaster

text: female genital disc

text: Drosophila melanogaster

text: female


text: public

text: ArrayExpress

characteristic: broker name

text: fruit fly

characteristic: description

text: third instar larva stage

characteristic: developmental stage

text: w-; p{GawB}rn[GAL4-5]/UAS-GFP

characteristic: genotype

text: GFP-positive

text: Drosophila melanogaster

text: Drosophila melanogaster

text: prothoracic leg disc

text: Drosophila melanogaster

text: mixed

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: ArrayExpress

text: fruit fly

text: pupal stage

text: w-; p{GawB}rn[GAL4-5]/UAS-GFP

text: GFP-positive

characteristic: immunophenotype

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: prothoracic leg disc

text: Drosophila melanogaster

text: mixed


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: fruit fly

text: third instar larva stage

text: w-; ubiRFP/+;p{GawB}C68a/+;UAS-GFP/+

text: GFP-positive

text: Drosophila melanogaster

text: Drosophila melanogaster

text: male genital disc

characteristic: organism part

text: Drosophila melanogaster

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: fruit fly

text: pupal stage

text: w-; ubiRFP/+;p{GawB}C68a/+;UAS-GFP/+

text: GFP-positive

text: Drosophila melanogaster

text: Drosophila melanogaster

text: male genital disc

text: Drosophila melanogaster

text: male

characteristic: sex


text: public

text: ArrayExpress

characteristic: broker name

text: fruit fly

characteristic: common name

characteristic: description

text: third instar larva stage

characteristic: developmental stage

text: w-; en-GAL4:UAS-GFP/+

characteristic: genotype

text: GFP-positive

text: Drosophila melanogaster

text: Drosophila melanogaster

text: wing disc posterior compartment

text: Drosophila melanogaster

text: mixed


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: ArrayExpress

text: fruit fly

text: pupal stage

text: w-; en-GAL4:UAS-GFP/+

text: GFP-positive

characteristic: immunophenotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: wing disc posterior compartment

text: Drosophila melanogaster

text: mixed

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: fruit fly

text: third instar larva stage

text: w-; ap-GAL4:UAS-GFP/+

text: GFP-positive

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: wing disc ventral compartment

text: Drosophila melanogaster

text: mixed


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: fruit fly

text: pupal stage

text: w-; ap-GAL4:UAS-GFP/+

text: GFP-positive

text: Drosophila melanogaster

text: Drosophila melanogaster

text: wing disc ventral compartment

characteristic: organism part

text: Drosophila melanogaster

text: mixed


text: public

text: ArrayExpress

characteristic: broker name

text: fruit fly

characteristic: common name

characteristic: description

text: third instar larva stage

characteristic: developmental stage

text: w-; nub-GAL4/+;UAS-GFP/+

text: GFP-positive

text: Drosophila melanogaster

text: Drosophila melanogaster

text: wing disc

text: Drosophila melanogaster

text: mixed

characteristic: sex


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: ArrayExpress

text: fruit fly

text: pupal stage

text: w-; nub-GAL4/+;UAS-GFP/+

characteristic: genotype

text: GFP-positive

characteristic: immunophenotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: wing disc

text: Drosophila melanogaster

text: mixed


SAMI00000018-TEST TITLE CENTER seq31

text: KLE TEch

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SAMI00000018-TEST TITLE CENTER seq31

tag: Namespace:KLE TEch

text: rice

text: Oryza sativa

text: Oryza sativa

text: TEST TITLE CENTER seq31

characteristic: title


SAMI00000019-TEST TITLE CENTER seq3xxxx

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: KLE TEch

text: public

text: SAMI00000019-TEST TITLE CENTER seq3xxxx

characteristic: Submitter Id

text: rice

text: Oryza sativa

characteristic: organism

text: Oryza sativa

text: TEST TITLE CENTER seq3xxxx


text: mixed

characteristic: ArrayExpress-SEX

text: Diploscapter coronatus

characteristic: ArrayExpress-SPECIES

text: Mixed

characteristic: GENDER

text: SC

text: public

text: Diploscapter coronatus

characteristic: common name

text: Diploscapter coronatus

text: Diploscapter coronatus


text: mixed

text: Panagrolaimus sp. PS1579

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Mixed

text: SC

text: public

text: Panagrolaimus sp. PS1579

text: Panagrolaimus sp. PS1579

text: Panagrolaimus sp. PS1579


characteristic: INSDC center name

text: public

tag: Namespace:Plant Genome and Systems Biology, Helmholtz Center Munich - Research Center for Environmental Health

unit: day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Gransden

characteristic: cultivar

text: Protocols: Material for RNA extraction was harvested after 3, 5, 9, 12, and 14 days of growth, always at the same time of the day. The samples were frozen in liquid nitrogen and stored at -80°C until further processing. Three starting cultures of each strain were used to initiate parallel cultures (biological replicates) used for RNA extraction. Phenotypic characterization of the plant material has been performed using light microscopy and image analysis using ImageJ software. All five strains were grown in parallel in the same cultivation room. Starting cultures of protonemata were maintained on minimal media (BCD) at 16-h light [70-80 mmol m-2 s-1]/8-h dark at 25°C. Total RNA was extracted from frozen material using the RNeasy lipid tissue mini kit (Qiagen) with few modifications. Briefly, the frozen tissue was thoroughly homogenized using a tissuelyser with pre-frozen blocks. Approximately 120 μg of powdered tissue was lysed in 1 mL of QIAzol lysis reagent. Two hundred μL of chloroform was added and the mixture was centrifuged at 4°C. The aqueous phase was collected, 1.5 volumes of 100% (v/v) ethanol was added, and the mixture was vortexed. After binding of the RNA to the RNeasy mini spin column, on-column DNase I treatment was performed to remove genomic DNA. The column was washed with the RPE buffer (Qiagen), dried, and RNA eluted in 45 μL of ribonuclease-free water. The concentration of RNA was measured and RNA integrity was further assessed using an Agilent 2100 Bioanalyzer (DE54704553; Agilent Technologies) with an RNA 6000 LabChip kit. The RNA samples were stored at -80°C until sent for sequencing. Strand-specific TruSeqTM RNAseq library construction of 74 libraries was performed at The Norwegian High Throughput Sequencing Centre in Oslo.

characteristic: description

text: gametophyte

characteristic: developmental stage

characteristic: genotype

text: Physcomitrella patens

text: Physcomitrium patens

text: protonema

characteristic: organism part

text: primary protonema

characteristic: sampling site

text: Physcomitrium patens


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Plant Genome and Systems Biology, Helmholtz Center Munich - Research Center for Environmental Health

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: Gransden

text: gametophyte

text: Physcomitrella patens

text: Physcomitrium patens

text: protonema

text: primary protonema

text: Physcomitrium patens

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: ArrayExpress

text: Gransden

text: gametophyte

text: deltaLOOP

text: Physcomitrella patens

characteristic: organism

text: Physcomitrium patens

text: protonema

text: primary protonema

text: Physcomitrium patens


text: public

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Gransden

characteristic: cultivar

characteristic: description

text: gametophyte

text: wild type genotype

text: Physcomitrella patens

text: Physcomitrium patens

text: protonema

text: primary protonema

text: Physcomitrium patens


text: public

text: ArrayExpress

text: Gransden

text: gametophyte

characteristic: developmental stage

characteristic: genotype

text: Physcomitrella patens

text: Physcomitrium patens

text: mixed protonema and gametophore bud

characteristic: organism part

text: secondary protonema and gametophore bud

characteristic: sampling site

text: Physcomitrium patens


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ArrayExpress

text: Gransden

text: gametophyte

text: deltaLOOP

text: Physcomitrella patens

text: Physcomitrium patens

text: mixed protonema and gametophore bud

text: secondary protonema and gametophore bud

text: Physcomitrium patens


text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: Gransden

text: gametophyte

text: wild type genotype

text: Physcomitrella patens

text: Physcomitrium patens

text: mixed protonema and gametophore bud

text: secondary protonema and gametophore bud

text: Physcomitrium patens

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: ArrayExpress

text: Gransden

text: gametophyte

text: Physcomitrella patens

characteristic: organism

text: Physcomitrium patens

text: mixed protonema; gametophore bud and gametophore

text: mixed secondary protonema; gametophore bud and gametophore

text: Physcomitrium patens


text: public

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Gransden

characteristic: cultivar

characteristic: description

text: gametophyte

text: deltaLOOP

text: Physcomitrella patens

text: Physcomitrium patens

text: Physcomitrium patens


text: public

text: ArrayExpress

text: Gransden

text: gametophyte

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Physcomitrella patens

text: Physcomitrium patens

characteristic: organism part

characteristic: sampling site

text: Physcomitrium patens


E-MTAB-10908:Sample 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10908:Sample 1

tag: Namespace:Institute of Immunobiology, Kantonsspital St. Gallen, St. Gallen, Switzerland

text: ArrayExpress

text: fibroblast

text: house mouse

characteristic: common name

text: Protocols: Ccl19-Cre x R26R-EYFP mice were subcutaneously injected in one flank with 5 mg of LPS from E.coli (Sigma) together with 100 mg Ovalbumin grade VI (Sigma). Mice were sacrificed at day 3 post administration and brachial lymph nodes were removed for further lymph node stromal cell isolation and scRNA sequencing analysis. Brachial lymph nodes were transferred into a 24-well dish filled with RPMI 1640 medium containing 2% FCS, 20 mM Hepes (all from Lonza), 1 mg/ml Collagenase D (Sigma), 25 µg/ml DNAse I (Applichem) and Dispase (Roche). Dissociated tissues were incubated at 37°C for 30 minutes. After enzymatic digestion, cell suspensions were washed with PBS containing 0.5% FCS and 10 mM EDTA. Stromal cells were enriched by depleting CD45+ hematopoietic cells and TER119+ erythrocytes using MACS microbeads (Miltenyi, Germany). Cells were sorted for EYFP+CD31-CD45- reticular cells and processed using the 10x Chromium (10X Genomics) system. cDNA library generation was performed following the established commercial protocol for Chromium Single Cell 3’ Reagent Kit (v3 Chemistry).

text: adult

text: C57BL/6N-Tg(Ccl19-Cre) x R26-EYFP

characteristic: immunophenotype

characteristic: individual

text: Mus musculus

text: Mus musculus

text: brachial lymph node

text: Mus musculus

text: female

characteristic: sex

characteristic: strain

text: Sample 1


E-MTAB-10908:Sample 2

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute of Immunobiology, Kantonsspital St. Gallen, St. Gallen, Switzerland

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10908:Sample 2

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: fibroblast

text: house mouse

text: adult

text: C57BL/6N-Tg(Ccl19-Cre) x R26-EYFP

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brachial lymph node

text: Mus musculus

text: female

text: Sample 2

characteristic: title


E-MTAB-10908:Sample 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-10908:Sample 3

text: ArrayExpress

characteristic: broker name

text: fibroblast

text: house mouse

characteristic: description

text: adult

characteristic: developmental stage

text: C57BL/6N-Tg(Ccl19-Cre) x R26-EYFP

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: brachial lymph node

characteristic: organism part

text: Mus musculus

text: female

text: Sample 3


E-MTAB-10908:Sample 4

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-10908:Sample 4

text: ArrayExpress

text: fibroblast

text: house mouse

characteristic: common name

text: adult

text: C57BL/6N-Tg(Ccl19-Cre) x R26-EYFP

characteristic: immunophenotype

characteristic: individual

text: Mus musculus

text: Mus musculus

text: brachial lymph node

text: Mus musculus

text: female

characteristic: sex

characteristic: strain

text: Sample 4


WT

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: WT

tag: Namespace:School of Life Sciences, University of Dundee

characteristic: Submitter Id

characteristic: collecting institution

text: Natalie Wiedemar

characteristic: collector name

text: malaria parasite P. falciparum

text: intra-erythrocytic stage

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: isolate

text: Plasmodium falciparum

text: Plasmodium falciparum

text: Pf Dd2 wildtype parasites


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: School of Life Sciences, University of Dundee

characteristic: INSDC first public

text: public

text: Natalie Wiedemar

text: malaria parasite P. falciparum

text: intra-erythrocytic stage

text: United Kingdom

text: Plasmodium falciparum

characteristic: organism

text: Plasmodium falciparum

text: Pf Dd2 parasites resistant to KRS inhibitors, clone Res 1

characteristic: title


characteristic: INSDC last update

text: public

text: Natalie Wiedemar

text: malaria parasite P. falciparum

characteristic: common name

text: intra-erythrocytic stage

text: United Kingdom

text: Plasmodium falciparum

text: Plasmodium falciparum

text: Pf Dd2 parasites resistant to KRS inhibitors, clone Res 2


characteristic: ENA-LAST-UPDATE

text: public

text: Natalie Wiedemar

text: malaria parasite P. falciparum

text: intra-erythrocytic stage

text: United Kingdom

text: Plasmodium falciparum

text: Plasmodium falciparum

text: Pf Dd2 parasites resistant to KRS inhibitors, clone Res 3


New-Mu-Nang

characteristic: External Id

text: CENTER FOR AGRICULTURAL BIOTECHNOLOGY

text: public

text: New-Mu-Nang

tag: Namespace:CENTER FOR AGRICULTURAL BIOTECHNOLOGY

text: Kanlayanee Suvittawat

characteristic: collected by

characteristic: collection date

text: DNA extracted from cigar leaf of the banana cultivar New-Mu-Nang from Kasetsart University collection at Pak-Chong, Thailand

characteristic: description

unit: m

characteristic: elevation

text: 500 Mb

characteristic: estimated size

characteristic: extrachromosomal elements

text: Thailand

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Pak Chong district, Nakhon Ratchassima province

characteristic: geographic location (region and locality)

text: experimental garden

characteristic: growth facility

text: Kanlayanee Suvittawat

characteristic: identified by

text: Plantation

characteristic: isolation and growth condition

characteristic: number of replicons

text: Musa ABI Group

text: Cultivated banana New-Mu-Nang

characteristic: organism common name

text: mature

characteristic: plant developmental stage

text: soil

characteristic: plant growth medium

text: unfolding leaf

characteristic: plant structure

characteristic: ploidy

text: vegetative propagation (sucker)

characteristic: propagation

text: Musa ABI Group

text: NewMuNang

characteristic: source material identifiers

text: New-Mu-Nang banana cultivar from Thailand


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF ZUERICH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF ZUERICH

characteristic: Submitter Id

characteristic: collection date

text: plant metagenome

characteristic: common name

text: soil ctr 30

characteristic: description

text: ecosystem

characteristic: environment (biome)

text: environment associated with a plant part or small plant

characteristic: environment (feature)

text: environment determined by a plant substance

characteristic: environment (material)

text: Switzerland

characteristic: geographic location (country and/or sea)

text: wild strawberry

characteristic: host common name

characteristic: host taxid

text: metagenome

characteristic: investigation type

text: plant metagenome

characteristic: organism

text: rhizosphere

characteristic: plant product

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: plant metagenome

text: Illumina

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF ZUERICH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: plant metagenome

text: LN_exp 463

text: ecosystem

text: Switzerland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: wild strawberry

text: metagenome

text: plant metagenome

text: rhizosphere

text: plant-associated

text: plant metagenome

text: Illumina


text: UNIVERSITY OF ZUERICH

text: public

characteristic: collection date

text: plant metagenome

characteristic: common name

text: LN_exp 310

characteristic: description

text: ecosystem

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Switzerland

characteristic: geographic location (country and/or sea)

text: wild strawberry

characteristic: host common name

characteristic: host taxid

text: metagenome

characteristic: investigation type

text: plant metagenome

characteristic: organism

text: rhizosphere

characteristic: plant product

text: plant-associated

text: plant metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF ZUERICH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: plant metagenome

text: LN_exp 11

text: ecosystem

text: Switzerland

text: wild strawberry

text: metagenome

text: plant metagenome

text: rhizosphere

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: plant metagenome

text: Illumina

characteristic: sequencing method

characteristic: title


text: UNIVERSITY OF ZUERICH

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: plant metagenome

characteristic: common name

text: LN_exp 454

characteristic: description

text: ecosystem

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: wild strawberry

characteristic: host common name

text: metagenome

text: plant metagenome

text: rhizosphere

text: plant-associated

text: plant metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF ZUERICH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: plant metagenome

text: LN_exp 423

text: ecosystem

text: Switzerland

text: wild strawberry

characteristic: host taxid

text: metagenome

characteristic: investigation type

text: plant metagenome

characteristic: organism

text: rhizosphere

characteristic: plant product

text: plant-associated

text: plant metagenome

text: Illumina


text: UNIVERSITY OF ZUERICH

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: plant metagenome

characteristic: common name

text: LN_exp 70

characteristic: description

text: ecosystem

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Switzerland

text: wild strawberry

text: metagenome

text: plant metagenome

text: rhizosphere

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: plant metagenome

text: Illumina

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF ZUERICH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: plant metagenome

text: LN_exp 15

text: ecosystem

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: wild strawberry

characteristic: host common name

text: metagenome

text: plant metagenome

text: rhizosphere

text: plant-associated

text: plant metagenome

text: Illumina


text: UNIVERSITY OF ZUERICH

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: plant metagenome

characteristic: common name

text: LN_exp 112

characteristic: description

text: ecosystem

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Switzerland

text: wild strawberry

characteristic: host taxid

text: metagenome

characteristic: investigation type

text: plant metagenome

characteristic: organism

text: rhizosphere

characteristic: plant product

text: plant-associated

text: plant metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF ZUERICH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: plant metagenome

text: LN_exp 77

text: ecosystem

text: Switzerland

text: wild strawberry

text: metagenome

text: plant metagenome

text: rhizosphere

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: plant metagenome

text: Illumina

characteristic: sequencing method

characteristic: title


text: UNIVERSITY OF ZUERICH

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: plant metagenome

characteristic: common name

text: soil ctr 17

characteristic: description

text: ecosystem

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: wild strawberry

characteristic: host common name

text: metagenome

text: plant metagenome

text: rhizosphere

text: plant-associated

text: plant metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF ZUERICH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: plant metagenome

text: LN_exp 306

text: ecosystem

text: Switzerland

text: wild strawberry

characteristic: host taxid

text: metagenome

characteristic: investigation type

text: plant metagenome

characteristic: organism

text: rhizosphere

characteristic: plant product

text: plant-associated

text: plant metagenome

text: Illumina


text: UNIVERSITY OF ZUERICH

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: plant metagenome

characteristic: common name

text: LN_exp 268

characteristic: description

text: ecosystem

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Switzerland

text: wild strawberry

text: metagenome

text: plant metagenome

text: rhizosphere

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: plant metagenome

text: Illumina

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF ZUERICH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: plant metagenome

text: LN_exp 223

text: ecosystem

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: wild strawberry

characteristic: host common name

text: metagenome

text: plant metagenome

text: rhizosphere

text: plant-associated

text: plant metagenome

text: Illumina


text: UNIVERSITY OF ZUERICH

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: plant metagenome

characteristic: common name

text: LN_exp 252

characteristic: description

text: ecosystem

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Switzerland

text: wild strawberry

characteristic: host taxid

text: metagenome

characteristic: investigation type

text: plant metagenome

characteristic: organism

text: rhizosphere

characteristic: plant product

text: plant-associated

text: plant metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF ZUERICH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: plant metagenome

text: LN_exp 165

text: ecosystem

text: Switzerland

text: wild strawberry

text: metagenome

text: plant metagenome

text: rhizosphere

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: plant metagenome

text: Illumina

characteristic: sequencing method

characteristic: title


text: UNIVERSITY OF ZUERICH

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: plant metagenome

characteristic: common name

text: soil ctr 12

characteristic: description

text: ecosystem

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: wild strawberry

characteristic: host common name

text: metagenome

text: plant metagenome

text: rhizosphere

text: plant-associated

text: plant metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF ZUERICH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: plant metagenome

text: LN_exp 274

text: ecosystem

text: Switzerland

text: wild strawberry

characteristic: host taxid

text: metagenome

characteristic: investigation type

text: plant metagenome

characteristic: organism

text: rhizosphere

characteristic: plant product

text: plant-associated

text: plant metagenome

text: Illumina


text: UNIVERSITY OF ZUERICH

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: plant metagenome

characteristic: common name

text: LN_exp 65

characteristic: description

text: ecosystem

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Switzerland

text: wild strawberry

text: metagenome

text: plant metagenome

text: rhizosphere

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: plant metagenome

text: Illumina

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF ZUERICH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: plant metagenome

text: LN_exp 429

text: ecosystem

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: wild strawberry

characteristic: host common name

text: metagenome

text: plant metagenome

text: rhizosphere

text: plant-associated

text: plant metagenome

text: Illumina


text: UNIVERSITY OF ZUERICH

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: plant metagenome

characteristic: common name

text: LN_exp 202

characteristic: description

text: ecosystem

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Switzerland

text: wild strawberry

characteristic: host taxid

text: metagenome

characteristic: investigation type

text: plant metagenome

characteristic: organism

text: rhizosphere

characteristic: plant product

text: plant-associated

text: plant metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF ZUERICH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: plant metagenome

text: LN_exp 488

text: ecosystem

text: Switzerland

text: wild strawberry

text: metagenome

text: plant metagenome

text: rhizosphere

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: plant metagenome

text: Illumina

characteristic: sequencing method

characteristic: title


text: UNIVERSITY OF ZUERICH

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: plant metagenome

characteristic: common name

text: LN_exp 168

characteristic: description

text: ecosystem

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: wild strawberry

characteristic: host common name

text: metagenome

text: plant metagenome

text: rhizosphere

text: plant-associated

text: plant metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF ZUERICH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: plant metagenome

text: LN_exp 78

text: ecosystem

text: Switzerland

text: wild strawberry

characteristic: host taxid

text: metagenome

characteristic: investigation type

text: plant metagenome

characteristic: organism

text: rhizosphere

characteristic: plant product

text: plant-associated

text: plant metagenome

text: Illumina


text: UNIVERSITY OF ZUERICH

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: plant metagenome

characteristic: common name

text: LN_exp 114

characteristic: description

text: ecosystem

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Switzerland

text: wild strawberry

text: metagenome

text: plant metagenome

text: rhizosphere

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: plant metagenome

text: Illumina

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF ZUERICH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: plant metagenome

text: LN_exp 288

text: ecosystem

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: wild strawberry

characteristic: host common name

text: metagenome

text: plant metagenome

text: rhizosphere

text: plant-associated

text: plant metagenome

text: Illumina


text: UNIVERSITY OF ZUERICH

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: plant metagenome

characteristic: common name

text: LN_exp 428

characteristic: description

text: ecosystem

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Switzerland

text: wild strawberry

characteristic: host taxid

text: metagenome

characteristic: investigation type

text: plant metagenome

characteristic: organism

text: rhizosphere

characteristic: plant product

text: plant-associated

text: plant metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF ZUERICH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: plant metagenome

text: LN_exp 282

text: ecosystem

text: Switzerland

text: wild strawberry

text: metagenome

text: plant metagenome

text: rhizosphere

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: plant metagenome

text: Illumina

characteristic: sequencing method

characteristic: title


text: UNIVERSITY OF ZUERICH

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: plant metagenome

characteristic: common name

text: LN_exp 459

characteristic: description

text: ecosystem

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: wild strawberry

characteristic: host common name

text: metagenome

text: plant metagenome

text: rhizosphere

text: plant-associated

text: plant metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF ZUERICH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: plant metagenome

text: soil ctr 16

text: ecosystem

text: Switzerland

text: wild strawberry

characteristic: host taxid

text: metagenome

characteristic: investigation type

text: plant metagenome

characteristic: organism

text: rhizosphere

characteristic: plant product

text: plant-associated

text: plant metagenome

text: Illumina


text: UNIVERSITY OF ZUERICH

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: plant metagenome

characteristic: common name

text: LN_exp 54

characteristic: description

text: ecosystem

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Switzerland

text: wild strawberry

text: metagenome

text: plant metagenome

text: rhizosphere

text: plant-associated

characteristic: plant-associated environmental package

characteristic: project name

text: plant metagenome

text: Illumina

characteristic: sequencing method

characteristic: title