status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELLENIC CENTRE FOR MARINE RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:HELLENIC CENTRE FOR MARINE RESEARCH

characteristic: Submitter Id

characteristic: collection date

text: Sample from the motile fraction (100 um) of the ARMS plates in Katza-1 amplified for the 18S rRNA

characteristic: description

text: Yes

characteristic: environmental sample

text: Israel

characteristic: geographic location (country and/or sea)

text: Eilat

characteristic: geographic location (region and locality)

text: 29.52, 34.93

characteristic: lat lon

text: marine metagenome

characteristic: organism

text: marine metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HELLENIC CENTRE FOR MARINE RESEARCH

text: public

text: Sample from the motile fraction (500 um) of the ARMS plates in Katza-1 amplified for the 18S rRNA

text: Yes

text: Israel

text: Eilat

text: 29.52, 34.93

text: marine metagenome

text: marine metagenome


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELLENIC CENTRE FOR MARINE RESEARCH

text: public

text: Sample from the sessile fraction (45 um) of the ARMS plates in Katza-1 amplified for the 18S rRNA

text: Yes

text: Israel

text: Eilat

text: 29.52, 34.93

text: marine metagenome

text: marine metagenome


text: HELLENIC CENTRE FOR MARINE RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Sample from the motile fraction (100 um) of the ARMS plates in Katza-2 amplified for the 18S rRNA

text: Yes

text: Israel

text: Eilat

text: 29.52, 34.93

text: marine metagenome

text: marine metagenome


text: HELLENIC CENTRE FOR MARINE RESEARCH

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Sample from the motile fraction (500 um) of the ARMS plates in Katza-2 amplified for the 18S rRNA

text: Yes

text: Israel

text: Eilat

text: 29.52, 34.93

text: marine metagenome

text: marine metagenome


text: HELLENIC CENTRE FOR MARINE RESEARCH

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Sample from the sessile fraction (45 um) of the ARMS plates in Katza-2 amplified for the 18S rRNA

text: Yes

text: Israel

text: Eilat

text: 29.52, 34.93

text: marine metagenome

text: marine metagenome


text: HELLENIC CENTRE FOR MARINE RESEARCH

text: public

characteristic: collection date

text: Sample from the motile fraction (100 um) of the ARMS plates in NR-1 amplified for the 18S rRNA

characteristic: description

text: Yes

text: Israel

text: Eilat

text: 29.5, 34.9

text: marine metagenome

text: marine metagenome


text: HELLENIC CENTRE FOR MARINE RESEARCH

text: public

text: Sample from the motile fraction (500 um) of the ARMS plates in NR-1 amplified for the 18S rRNA

text: Yes

characteristic: environmental sample

text: Israel

characteristic: geographic location (country and/or sea)

text: Eilat

text: 29.5, 34.9

text: marine metagenome

text: marine metagenome


text: HELLENIC CENTRE FOR MARINE RESEARCH

text: public

text: Sample from the sessile fraction (45 um) of the ARMS plates in NR-1 amplified for the 18S rRNA

text: Yes

text: Israel

text: Eilat

characteristic: geographic location (region and locality)

text: 29.5, 34.9

characteristic: lat lon

text: marine metagenome

text: marine metagenome


text: HELLENIC CENTRE FOR MARINE RESEARCH

text: public

text: Sample from the motile fraction (100 um) of the ARMS plates in NR-2 amplified for the 18S rRNA

text: Yes

text: Israel

text: Eilat

text: 29.5, 34.9

text: marine metagenome

characteristic: organism

text: marine metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HELLENIC CENTRE FOR MARINE RESEARCH

text: public

text: Sample from the motile fraction (500 um) of the ARMS plates in NR-2 amplified for the 18S rRNA

text: Yes

text: Israel

text: Eilat

text: 29.5, 34.9

text: marine metagenome

text: marine metagenome


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELLENIC CENTRE FOR MARINE RESEARCH

text: public

text: Sample from the sessile fraction (45 um) of the ARMS plates in NR-2 amplified for the 18S rRNA

text: Yes

text: Israel

text: Eilat

text: 29.5, 34.9

text: marine metagenome

text: marine metagenome


text: HELLENIC CENTRE FOR MARINE RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Sample from the motile fraction (100 um) of the ARMS plates in Katza-1 amplified for the COI

text: Yes

text: Israel

text: Eilat

text: 29.52, 34.93

text: marine metagenome

text: marine metagenome


text: HELLENIC CENTRE FOR MARINE RESEARCH

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Sample from the motile fraction (500 um) of the ARMS plates in Katza-1 amplified for the COI

text: Yes

text: Israel

text: Eilat

text: 29.52, 34.93

text: marine metagenome

text: marine metagenome


text: HELLENIC CENTRE FOR MARINE RESEARCH

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Sample from the sessile fraction (45 um) of the ARMS plates in Katza-1 amplified for the COI

text: Yes

text: Israel

text: Eilat

text: 29.52, 34.93

text: marine metagenome

text: marine metagenome


text: HELLENIC CENTRE FOR MARINE RESEARCH

text: public

characteristic: collection date

text: Sample from the motile fraction (100 um) of the ARMS plates in Katza-2 amplified for the COI

characteristic: description

text: Yes

text: Israel

text: Eilat

text: 29.52, 34.93

text: marine metagenome

text: marine metagenome


text: HELLENIC CENTRE FOR MARINE RESEARCH

text: public

text: Sample from the motile fraction (500 um) of the ARMS plates in Katza-2 amplified for the COI

text: Yes

characteristic: environmental sample

text: Israel

characteristic: geographic location (country and/or sea)

text: Eilat

text: 29.52, 34.93

text: marine metagenome

text: marine metagenome


text: HELLENIC CENTRE FOR MARINE RESEARCH

text: public

text: Sample from the sessile fraction (45 um) of the ARMS plates in Katza-2 amplified for the COI

text: Yes

text: Israel

text: Eilat

characteristic: geographic location (region and locality)

text: 29.52, 34.93

characteristic: lat lon

text: marine metagenome

text: marine metagenome


text: HELLENIC CENTRE FOR MARINE RESEARCH

text: public

text: Sample from the motile fraction (100 um) of the ARMS plates in NR-1 amplified for the COI

text: Yes

text: Israel

text: Eilat

text: 29.5, 34.9

text: marine metagenome

characteristic: organism

text: marine metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HELLENIC CENTRE FOR MARINE RESEARCH

text: public

text: Sample from the motile fraction (500 um) of the ARMS plates in NR-1 amplified for the COI

text: Yes

text: Israel

text: Eilat

text: 29.5, 34.9

text: marine metagenome

text: marine metagenome


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELLENIC CENTRE FOR MARINE RESEARCH

text: public

text: Sample from the sessile fraction (45 um) of the ARMS plates in NR-1 amplified for the COI

text: Yes

text: Israel

text: Eilat

text: 29.5, 34.9

text: marine metagenome

text: marine metagenome


text: HELLENIC CENTRE FOR MARINE RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Sample from the motile fraction (100 um) of the ARMS plates in NR-2 amplified for the COI

text: Yes

text: Israel

text: Eilat

text: 29.5, 34.9

text: marine metagenome

text: marine metagenome


text: HELLENIC CENTRE FOR MARINE RESEARCH

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Sample from the motile fraction (500 um) of the ARMS plates in NR-2 amplified for the COI

text: Yes

text: Israel

text: Eilat

text: 29.5, 34.9

text: marine metagenome

text: marine metagenome


text: HELLENIC CENTRE FOR MARINE RESEARCH

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Sample from the sessile fraction (45 um) of the ARMS plates in NR-2 amplified for the COI

text: Yes

text: Israel

text: Eilat

text: 29.5, 34.9

text: marine metagenome

text: marine metagenome


text: IDIBAPS

text: public

text: human

characteristic: common name

text: DNA extracted from IV tumor cases from FFPE tissue.

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: Intravascular lymphoma


text: public

tag: Namespace:IFEVA (CONICET-UBA), Facultad de Agronomia (FAUBA), Universidad de Buenos Aires (UBA)

unit: day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: cultivar

text: Protocols: At least 50 seedlings were pooled from three independent petri dishes for RNA extraction. Arabidopsis thaliana seeds were surfaced sterilized and sown in petri dishes with agarified (0.8% Bacto Agar) 0.5x MS medium, containing 1% sucrose and 0.05% MES at pH 5.7. After stratification for 3 days at 4°C, seedlings were grown in a CU-22L growth chamber (Percival) under 21°C and a 12/12 h (day/night) light cycle. For treatment, 7 days-old seedlings were subjected to changes in temperature only during the light period. Long-term heat consisted of an entrainment treatment of 5 heat cycles (day 37C, night 21C, 12/12 h; age at harvest 12 days). Controls were kept at 21C (age at harvest 12 days). Total RNA was isolated from biologically duplicated samples using the the Plant-RNAeasy kit (Invitrogen), following provider's instructions. Libraries were prepared with the corresponding Illumina library preparation kit, following provider’s instructions.

text: seedling development stage

characteristic: developmental stage

text: drm2-2; cmt3-11

characteristic: genotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole organism

characteristic: organism part

text: Arabidopsis thaliana


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: IFEVA (CONICET-UBA), Facultad de Agronomia (FAUBA), Universidad de Buenos Aires (UBA)

text: public

text: ArrayExpress

text: thale cress

text: seedling development stage

text: drm2-2; cmt3-11

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: whole organism

text: Arabidopsis thaliana

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: thale cress

text: seedling development stage

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole organism

text: Arabidopsis thaliana


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: thale cress

text: seedling development stage

text: wild type genotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole organism

text: Arabidopsis thaliana


text: public

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

characteristic: description

text: seedling development stage

text: warm/hot temperature regimen

characteristic: environmental stress

text: drm2-2; cmt3-11

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole organism

text: Arabidopsis thaliana


characteristic: ENA-CHECKLIST

text: public

text: ArrayExpress

text: thale cress

characteristic: cultivar

text: seedling development stage

characteristic: developmental stage

text: warm/hot temperature regimen

characteristic: genotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole organism

characteristic: organism part

text: Arabidopsis thaliana


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: ArrayExpress

text: thale cress

text: seedling development stage

text: warm/hot temperature regimen

text: wild type genotype

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: whole organism

text: Arabidopsis thaliana

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:INSERM U1242 OSS (Oncogenesis, Stress and Signaling) - Universite de Rennes1

unit: year

text: ArrayExpress

characteristic: cell line

text: human

text: Protocols: MP41 cell line was obtained from Decaudin’s lab at Curie Institute, Paris, France. Mel202 and 92.1 cell line were obtained from European Collection of Authenticated Cell Cultures (ECACC) (Merck). All cell lines were maintained in humidified air (37°C, 5% CO2). Uveal melanoma cell lines were maintained in RPMI-1640 medium (GibcoTM, ThermoFisher, MA) supplemented with 20% Fetal Bovine Serum (FBS) (EurobioScientific) and 1% Penicillin-Streptomycin (PS) antibiotics (GibcoTM, ThermoFisher). All cell lines have been routinely tested for mycoplasma contamination (Mycoplasma contamination detection kit; rep-pt1; InvivoGen). Experiments were performed on MP41 cells according to the protocol published by Judy Lieberman’s lab (Tan SM, Lieberman J. Capture and identification of mirna targets by biotin pulldown and RNA-seq. In: Methods in Molecular Biology. 2016. p. 211-28.) but with minor modifications. 15 millions of MP41 cells were seeded in 3 X 150mm dishes 5 millions each) and were transfected the next day with 100nM of biotinylated miR-16 or miR-CTR (Dharmacon). Next, they were harvested ~24h post transfection. Cells from the 3 dishes were treated separately. Meanwhile, magnetic beads (Streptavidine Dynabeads™ M-280 DYNAL™, ThermoFisher Scientific) were washed and blocked according to the protocol. Cell lysate and washed beads were incubated for 4 hours at 4°C on a rotating agitator. All next steps: the precipitation and the purification of coupled RNA was performed according to the protocol. We pooled the 3 same conditions (from the 3 transfected plates) in the end of the RNA purification. Purified RNA was quantified using quantified using a NanoDrop 1000 Spectrophotometer (ThermoFisher Scientific) Experiments were performed on MP41 cells according to the protocol published by Judy Lieberman’s lab (Tan SM, Lieberman J. Capture and identification of mirna targets by biotin pulldown and RNA-seq. In: Methods in Molecular Biology. 2016. p. 211-28.).

text: adult

text: uveal melanoma

characteristic: disease

text: Homo sapiens

text: Homo sapiens

text: eye

text: Homo sapiens

text: female

characteristic: sex

text: biotinylated miR-16 transfection

characteristic: treatment


characteristic: ENA-CHECKLIST

text: INSERM U1242 OSS (Oncogenesis, Stress and Signaling) - Universite de Rennes1

text: public

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: human

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: uveal melanoma

text: Homo sapiens

text: Homo sapiens

text: eye

text: Homo sapiens

text: female

text: miR-Control

text: biotinylated miR-Control transfection


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: ArrayExpress

text: thale cress

characteristic: cultivar

text: Protocols: At least 50 seedlings were pooled from three independent petri dishes for RNA extraction. For treatment, 7 days-old seedlings were subjected to changes in temperature only during the light period. Long-term heat consisted of an entrainment treatment of 5 heat cycles (day 37C, night 21C, 12/12 h; final age 12 days). This was followed by 3 days of recovery at 21C in recovery samples (age at harvest 15 days). Total RNA was isolated from biologically duplicated samples using the the Plant-RNAeasy kit (Invitrogen), following provider's instructions. Libraries were prepared with the corresponding Illumina library preparation kit, following provider’s instructions.

text: seedling development stage

text: wild type genotype

characteristic: genotype

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: whole organism

characteristic: organism part

text: Arabidopsis thaliana

text: recovery after long term heat stress

characteristic: stimulus

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: thale cress

text: seedling development stage

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole organism

text: Arabidopsis thaliana

text: recovery after long term heat stress


characteristic: ENA-CHECKLIST

text: public

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

text: seedling development stage

text: drm2-2; cmt3-11

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole organism

text: Arabidopsis thaliana

text: recovery after long term heat stress


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

tag: Namespace:Institute of Botany, the Chinese Academy of Sciences, Beijing

unit: week

text: ArrayExpress

text: thale cress

text: Protocols: Total RNA was isolated from two-week-old wild-type and atnusg mutant young leaves. For total RNA isolation, frozen sample was ground in liquid nitrogen, and total RNA were extracted using Trizol reagent plus RNeasy mini kit,according to the manufacturer’s instructions mRNA was enriched using oligo-(dT) primer for nuclear-encoded genes and reverse-transcribed using random hexamers primers. The double-stranded cDNA was purified using AMPure XP beads and treated with End Prep Enzyme Mix to repair both ends and to add a dA-tail in one reaction, followed by T-A ligation to add adaptors to both ends. Size selection of adaptor-ligated DNA was performed using AMPure XP beads, and ~360-bp fragments (with an approximate insert size of 300 bp) were recovered. The library was then constructed and sequenced using an Illumina platform

characteristic: description

text: seedling developmental stage

characteristic: developmental stage

characteristic: ecotype

text: atnusg mutant

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: leaf

text: Arabidopsis thaliana


text: Institute of Botany, the Chinese Academy of Sciences, Beijing

text: public

text: ArrayExpress

text: thale cress

text: seedling developmental stage

text: atnusg mutant

characteristic: genotype

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: leaf

characteristic: organism part

text: Arabidopsis thaliana

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: thale cress

text: seedling developmental stage

text: wild type genotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: leaf

text: Arabidopsis thaliana


E-MTAB-10989:Sample 1

characteristic: ENA-CHECKLIST

text: public

characteristic: SRA accession

text: E-MTAB-10989:Sample 1

tag: Namespace:Immuno-genomics & Systems Biology laboratory, Institute of Life Sciences (ILS), Bhubaneswar, Odisha, India-751023. Manipal Academy of Higher Education, Manipal,

characteristic: Submitter Id

text: ArrayExpress

characteristic: cell line

text: dendritic cell

characteristic: cell type

text: house mouse

text: Protocols: DC Cell lines (CD8+ cDC1 control and NCoR1 KD) were grown in IMDM medium supplemented with 10% FBS and antibiotic solution, 5 x 10-5 M b-mercaptoethanol, sodium bicarbonate and HEPES. The cells were maintained at 37°C in a humidified incubator with 5% CO2. These DCs were dissociated with a short incubation of 2-3 min in a nonenzymatic, 5 mM EDTA in 20 mM HEPES buffer. Cells were plated in 6-well plates at a density of 5 x 105 cells/ml overnight. The cells were then challenged with different activation media containing IFNg, TLR3 agonist pIC, and CpG+pIC+IFNg for 2hr or 6hr. For performing RT-qPCR analysis the cells were washed in the plate once with PBS followed by addition of RNA-later (RLT) buffer (Qiagen) for lysis of cells. The plates were then stored at -80oC until further RNA isolation and processing of samples. mRNA was isolated from 2ug of total RNA using magnetic beads mRNA isolation kit (PolyA mRNA isolation Module, NEB) RNA-seq library preparation was performed using mRNA library preparation kit (NEB)

characteristic: immunophenotype

text: Mus musculus

text: Mus musculus

text: spleen

text: wild type

characteristic: phenotype

text: empty vector

characteristic: rna interference

text: Mus musculus

text: Sample 1


E-MTAB-10989:Sample 10

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Immuno-genomics & Systems Biology laboratory, Institute of Life Sciences (ILS), Bhubaneswar, Odisha, India-751023. Manipal Academy of Higher Education, Manipal,

text: public

text: E-MTAB-10989:Sample 10

text: ArrayExpress

characteristic: broker name

text: dendritic cell

text: house mouse

characteristic: common name

characteristic: description

text: Mus musculus

text: Mus musculus

text: spleen

text: wild type

text: empty vector

text: Mus musculus

text: Sample 10


E-MTAB-10989:Sample 11

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-10989:Sample 11

text: ArrayExpress

text: dendritic cell

text: house mouse

text: Mus musculus

characteristic: organism

text: Mus musculus

text: spleen

characteristic: organism part

text: NCoR1 knockdown

text: NCoR1 siRNA

text: Mus musculus

text: Sample 11

characteristic: title


E-MTAB-10989:Sample 12

characteristic: ENA-CHECKLIST

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10989:Sample 12

characteristic: Submitter Id

text: ArrayExpress

text: dendritic cell

text: house mouse

text: Mus musculus

text: Mus musculus

text: spleen

text: NCoR1 knockdown

text: NCoR1 siRNA

text: Mus musculus

text: Sample 12


E-MTAB-10989:Sample 13

text: public

text: E-MTAB-10989:Sample 13

text: ArrayExpress

characteristic: cell line

text: dendritic cell

characteristic: cell type

text: house mouse

characteristic: immunophenotype

text: Mus musculus

text: Mus musculus

text: spleen

text: wild type

characteristic: phenotype

text: empty vector

characteristic: rna interference

text: Mus musculus

text: Sample 13


E-MTAB-10989:Sample 14

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-10989:Sample 14

text: ArrayExpress

characteristic: broker name

text: dendritic cell

text: house mouse

characteristic: common name

text: Mus musculus

text: Mus musculus

text: spleen

text: wild type

text: empty vector

text: Mus musculus

text: Sample 14


E-MTAB-10989:Sample 15

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-10989:Sample 15

text: ArrayExpress

text: dendritic cell

text: house mouse

characteristic: description

text: Mus musculus

characteristic: organism

text: Mus musculus

text: spleen

characteristic: organism part

text: NCoR1 knockdown

text: NCoR1 siRNA

text: Mus musculus

text: Sample 15


E-MTAB-10989:Sample 16

characteristic: ENA-CHECKLIST

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10989:Sample 16

text: ArrayExpress

text: dendritic cell

text: house mouse

text: Mus musculus

text: Mus musculus

text: spleen

text: NCoR1 knockdown

text: NCoR1 siRNA

text: Mus musculus

text: Sample 16

characteristic: title


E-MTAB-10989:Sample 2

text: public

text: E-MTAB-10989:Sample 2

characteristic: Submitter Id

text: ArrayExpress

characteristic: cell line

text: dendritic cell

characteristic: cell type

text: house mouse

characteristic: immunophenotype

text: Mus musculus

text: Mus musculus

text: spleen

text: wild type

characteristic: phenotype

text: empty vector

text: Mus musculus

text: Sample 2


E-MTAB-10989:Sample 3

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-10989:Sample 3

text: ArrayExpress

characteristic: broker name

text: dendritic cell

text: house mouse

text: Mus musculus

text: Mus musculus

text: spleen

text: NCoR1 knockdown

text: NCoR1 siRNA

characteristic: rna interference

text: Mus musculus

text: Sample 3


E-MTAB-10989:Sample 4

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-10989:Sample 4

text: ArrayExpress

text: dendritic cell

text: house mouse

characteristic: common name

characteristic: description

text: Mus musculus

characteristic: organism

text: Mus musculus

text: spleen

text: NCoR1 knockdown

text: NCoR1 siRNA

text: Mus musculus

text: Sample 4


E-MTAB-10989:Sample 5

characteristic: ENA-CHECKLIST

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10989:Sample 5

text: ArrayExpress

text: dendritic cell

text: house mouse

text: Mus musculus

text: Mus musculus

text: spleen

characteristic: organism part

text: wild type

text: empty vector

text: Mus musculus

text: Sample 5


E-MTAB-10989:Sample 6

text: public

text: E-MTAB-10989:Sample 6

characteristic: Submitter Id

text: ArrayExpress

characteristic: cell line

text: dendritic cell

characteristic: cell type

text: house mouse

characteristic: immunophenotype

text: Mus musculus

text: Mus musculus

text: spleen

text: wild type

text: empty vector

text: Mus musculus

text: Sample 6

characteristic: title


E-MTAB-10989:Sample 7

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-10989:Sample 7

text: ArrayExpress

characteristic: broker name

text: dendritic cell

text: house mouse

text: Mus musculus

text: Mus musculus

text: spleen

text: NCoR1 knockdown

characteristic: phenotype

text: NCoR1 siRNA

text: Mus musculus

text: Sample 7


E-MTAB-10989:Sample 8

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-10989:Sample 8

text: ArrayExpress

text: dendritic cell

text: house mouse

characteristic: common name

characteristic: description

text: Mus musculus

text: Mus musculus

text: spleen

text: NCoR1 knockdown

text: NCoR1 siRNA

characteristic: rna interference

text: Mus musculus

text: Sample 8


E-MTAB-10989:Sample 9

characteristic: ENA-CHECKLIST

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-10989:Sample 9

text: ArrayExpress

text: dendritic cell

text: house mouse

text: Mus musculus

characteristic: organism

text: Mus musculus

text: spleen

text: wild type

text: empty vector

text: Mus musculus

text: Sample 9


text: Helmholtz Center Munich

text: public

tag: Namespace:Helmholtz Center Munich

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: date palm

text: Khalas

characteristic: cultivar

text: Protocols: Harvested plant material of both experiments (total leaves, whole roots) was immediately cut into small pieces, homogenized in liquid nitrogen to fine powder and stored at -80°C until further analyses. About two years old seedlings of micro-propagated Phoenix dactylifera, cv Khalas and Nabut Saif were purchased from Date Palm Developments Ltd. (Sommerset, U.K.). They were directly planted in 5 L pots filled with 70% quartz gravel (3 - 5mm diameter, Quarzwerke GmbH, Frechen, Germany) and covered by 3 - 5 cm soil substrate (Floragard Vertriebs-GmbH, Oldenburg, Germany). Seedlings were grown in walk-in phytotrons (area: 9.5 m2), each containing four plexiglas subchambers (volume: 0.9 m3 each) (Vanzo et al., 2015), at the Research Unit Environmental Simulation (EUS), Helmholtz Zentrum München (Neuherberg, Germany) at ambient CO2 from 6th June to 27th July 2016. The initial conditions were 30°C (12/12 h, day/night), 50% relative humidity, and then changed to experimental conditions (12/12 h day/night regime: rh 5%/30%, temperature 40/20°C, soil temperature 15°C) within 3 days. After 2 weeks of acclimation, salt treatment started with successive increasing concentrations every second day from 100 mM to 200, 400 and 600 mM NaCl. RNA isolation for RNAseq was done as described in Paoletti et al. 2021. At the Biomedicum Functional Genomics Unit (FuGU, Helsinki, Finland), the shoot total RNA was ribo-depleted using ribo-zero rRNA removal (Plant leaf) (Illumina) and the root total RNA was ribo-depleted using ribo-zero rRNA removal (Plant Seed/Root) (Illumina). The total RNA input amounts used for ribo-depletion were 200 ng for shoot and 1 µg for root. The NEBnext ultra directional (polyA purification) Kit was used for library construction.

text: LP.04 four leaves visible stage

characteristic: developmental stage

text: control

characteristic: environmental stress

text: wild type genotype

characteristic: genotype

text: Phoenix dactylifera

text: Phoenix dactylifera

text: root

characteristic: organism part

text: salt tolerant

text: Phoenix dactylifera


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Helmholtz Center Munich

characteristic: INSDC center name

text: public

text: ArrayExpress

characteristic: broker name

text: date palm

text: Khalas

text: LP.04 four leaves visible stage

text: salt treatment

text: wild type genotype

text: Phoenix dactylifera

text: Phoenix dactylifera

text: root

text: salt tolerant

characteristic: phenotype

text: Phoenix dactylifera

characteristic: title


characteristic: ENA-CHECKLIST

text: Helmholtz Center Munich

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: date palm

characteristic: common name

text: Nabut Saif

characteristic: description

text: LP.04 four leaves visible stage

text: control

text: wild type genotype

text: Phoenix dactylifera

text: Phoenix dactylifera

text: root

text: salt sensitive

text: Phoenix dactylifera


text: Helmholtz Center Munich

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: date palm

text: Nabut Saif

characteristic: cultivar

text: LP.04 four leaves visible stage

characteristic: developmental stage

text: salt treatment

text: wild type genotype

text: Phoenix dactylifera

characteristic: organism

text: Phoenix dactylifera

text: root

text: salt sensitive

text: Phoenix dactylifera


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Helmholtz Center Munich

text: public

text: ArrayExpress

text: date palm

text: Khalas

text: LP.04 four leaves visible stage

text: control

characteristic: environmental stress

text: wild type genotype

characteristic: genotype

text: Phoenix dactylifera

text: Phoenix dactylifera

text: shoot

characteristic: organism part

text: salt tolerant

text: Phoenix dactylifera


characteristic: ENA-CHECKLIST

text: Helmholtz Center Munich

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

characteristic: broker name

text: date palm

text: Khalas

text: LP.04 four leaves visible stage

text: salt treatment

text: wild type genotype

text: Phoenix dactylifera

text: Phoenix dactylifera

text: shoot

text: salt tolerant

characteristic: phenotype

text: Phoenix dactylifera

characteristic: title


text: Helmholtz Center Munich

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: date palm

characteristic: common name

text: Nabut Saif

characteristic: description

text: LP.04 four leaves visible stage

text: control

text: wild type genotype

text: Phoenix dactylifera

text: Phoenix dactylifera

text: shoot

text: salt sensitive

text: Phoenix dactylifera


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Helmholtz Center Munich

text: public

characteristic: age

text: ArrayExpress

text: date palm

text: Nabut Saif

characteristic: cultivar

text: LP.04 four leaves visible stage

characteristic: developmental stage

text: salt treatment

text: wild type genotype

text: Phoenix dactylifera

characteristic: organism

text: Phoenix dactylifera

text: shoot

text: salt sensitive

text: Phoenix dactylifera


characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

text: public

tag: Namespace:Department of Biochemistry University of Cambridge

text: ArrayExpress

text: Protocols: 2X10(7)exponentially growing (5h post-inoculation) and early post-diauxic phase (13h post-inoculation) cells were harvested by centrifugation at 1000 x g for 5 min at 4°C. Total RNA was isolated from using an RNeasy Mini kit (Qiagen, 74104). After the QC procedures of total RNA, mRNA is enriched using oligo(dT) beads. Enriched mRNA is fragmented randomly by adding fragmentation buffer, then the cDNA is first synthesized by using random hexamers primer, after which a custom second-strand synthesis buffer (Illumina), dNTPs, RNase H and DNA polymerase I are added to initiate the second-strand synthesis. Second, after a series of terminal repair, A ligation and sequencing adaptor ligation, the double-stranded cDNA library is completed through size selection and PCR enrichment.

text: mck1 deletion

characteristic: genotype

text: glucose-starved (early post diauxic shift)

characteristic: growth condition

text: early post-diauxic phase

characteristic: growth stage

text: Saccharomyces cerevisiae S288C

text: Saccharomyces cerevisiae S288C

text: whole organism

characteristic: organism part

characteristic: replicate

text: Saccharomyces cerevisiae S288C

characteristic: strain


text: Department of Biochemistry University of Cambridge

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: mck1 deletion

text: early post-diauxic phase

text: Saccharomyces cerevisiae S288C

text: Saccharomyces cerevisiae S288C

text: whole organism

text: Saccharomyces cerevisiae S288C

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: ArrayExpress

characteristic: description

text: mck1 deletion

text: glucose-replete (exponential)

text: exponential phase

text: Saccharomyces cerevisiae S288C

characteristic: organism

text: Saccharomyces cerevisiae S288C

text: whole organism

text: Saccharomyces cerevisiae S288C


characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

text: public

text: ArrayExpress

text: mck1 and slt2 deletions

characteristic: genotype

text: early post-diauxic phase

text: Saccharomyces cerevisiae S288C

text: Saccharomyces cerevisiae S288C

text: whole organism

text: Saccharomyces cerevisiae S288C


text: public

text: ArrayExpress

text: mck1 and slt2 deletions

text: glucose-replete (exponential)

characteristic: growth condition

text: exponential phase

characteristic: growth stage

text: Saccharomyces cerevisiae S288C

text: Saccharomyces cerevisiae S288C

text: whole organism

characteristic: organism part

characteristic: replicate

text: Saccharomyces cerevisiae S288C


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: slt2 deletion

text: early post-diauxic phase

text: Saccharomyces cerevisiae S288C

text: Saccharomyces cerevisiae S288C

text: whole organism

text: Saccharomyces cerevisiae S288C

characteristic: strain


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: slt2 deletion

text: glucose-replete (exponential)

text: exponential phase

text: Saccharomyces cerevisiae S288C

text: Saccharomyces cerevisiae S288C

text: whole organism

text: Saccharomyces cerevisiae S288C

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: ArrayExpress

characteristic: description

text: wild-type

text: early post-diauxic phase

text: Saccharomyces cerevisiae S288C

characteristic: organism

text: Saccharomyces cerevisiae S288C

text: whole organism

text: Saccharomyces cerevisiae S288C


characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

text: public

text: ArrayExpress

text: wild-type

characteristic: genotype

text: glucose-replete (exponential)

text: exponential phase

text: Saccharomyces cerevisiae S288C

text: Saccharomyces cerevisiae S288C

text: whole organism

text: Saccharomyces cerevisiae S288C


E-MTAB-11028:Sample 1

text: public

text: E-MTAB-11028:Sample 1

tag: Namespace:Institute of Immunobiology, Kantonsspital St. Gallen, St. Gallen, Switzerland

text: 8 to 12

characteristic: age

text: ArrayExpress

text: house mouse

characteristic: common name

text: Protocols: BALB/c mice were injected with CFZ (16 mg/kg, i.v.), CFZ and atRA (CFZ: 16 mg/kg i.v., atRA: 1 mg/kg i.v.) or Captisol (vehicle, i.v.) (2 mice per cohort). ECGs were recorded under anesthesia at the end of 1h treatment and the mice were sacrificed by cervical dislocation. Euthanized animals were perfused with 20 ml of PBS and small heart tissue pieces were digested three times for 20 min at 37°C with 120 µg/ml collagenase P (Roche), 25 µg/ml DNase I (Applichem, Germany) in medium (RPMI-1640 containing 5% FCS (Sigma-Aldrich, Switzerland) and10 mM HEPES (Sigma-Aldrich, Switzerland). To eliminate remaining erythrocytes, the cell suspensions were incubated with MACS anti-Ter119 microbeads (Miltenyi Biotec, Germany) and passed through a MACS LS column (Miltenyi Biotec, Germany). Unbound single cell suspensions were stained with Live/Dead Fixable e780 Aqua staining. Live cells were sorted with a BD FACS Melody cell sorter (BD Biosciences, CA, USA). cDNA library generation was performed following the established commercial protocol for Chromium Single Cell 3’ Reagent Kit (v3 Chemistry).

text: adult

characteristic: developmental stage

text: wild type genotype

text: mouse 1

characteristic: individual

text: Mus musculus

text: Mus musculus

text: heart

characteristic: organism part

text: Mus musculus

text: female

characteristic: sex

text: Balb/c

text: Sample 1


E-MTAB-11028:Sample 2

text: Institute of Immunobiology, Kantonsspital St. Gallen, St. Gallen, Switzerland

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11028:Sample 2

characteristic: Submitter Id

text: 8 to 12

text: ArrayExpress

text: house mouse

text: adult

text: wild type genotype

text: mouse 2

text: Mus musculus

text: Mus musculus

text: heart

text: Mus musculus

text: female

text: Balb/c

characteristic: strain

text: Sample 2


E-MTAB-11028:Sample 3

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-11028:Sample 3

text: 8 to 12

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: description

text: adult

text: wild type genotype

text: mouse 3

text: Mus musculus

characteristic: organism

text: Mus musculus

text: heart

text: Mus musculus

text: female

text: Balb/c

text: Sample 3

characteristic: title


E-MTAB-11028:Sample 4

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-11028:Sample 4

text: 8 to 12

characteristic: age

text: ArrayExpress

text: house mouse

characteristic: common name

text: adult

text: wild type genotype

characteristic: genotype

text: mouse 4

text: Mus musculus

text: Mus musculus

text: heart

text: Mus musculus

text: female

text: Balb/c

text: Sample 4


E-MTAB-11028:Sample 5

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-11028:Sample 5

text: 8 to 12

text: ArrayExpress

text: house mouse

text: adult

characteristic: developmental stage

text: wild type genotype

text: mouse 5

characteristic: individual

text: Mus musculus

text: Mus musculus

text: heart

characteristic: organism part

text: Mus musculus

text: female

characteristic: sex

text: Balb/c

text: Sample 5


E-MTAB-11028:Sample 6

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11028:Sample 6

characteristic: Submitter Id

text: 8 to 12

text: ArrayExpress

text: house mouse

text: adult

text: wild type genotype

text: mouse 6

text: Mus musculus

text: Mus musculus

text: heart

text: Mus musculus

text: female

text: Balb/c

characteristic: strain

text: Sample 6


characteristic: ENA-CHECKLIST

characteristic: External Id

text: public

text: 54444:51db5f48-99bc-4d05-a72d-d7e4511a82a6

tag: Namespace:Max Planck Institute for Marine Microbiology

text: GFBIO

characteristic: broker name

characteristic: collection date

text: PS101/226-1 Bottom water CTD

characteristic: description

text: oceanic abissopelagic zone biome [ENVO:01000038]

characteristic: environment (biome)

text: mid-ocean ridge [ENVO:00000406]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: organism

text: S-D-Bact-0341-b-S-17 / S-D-Bact-0785-a-A-21

characteristic: pcr primers

text: Microbial community from deep-sea non-buoyant hydrothermal plumes of the Gakkel Ridge (Central Arctic Ocean); M. Molari was benefited with the ERC advanced investigation grant ABYSS (294757) and with the JPIOcean (BMBF grant 03F0707A-G)

characteristic: project name

text: PS101/226-1 Bottom water CTD

characteristic: sample description

text: sediment metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: title

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Max Planck Institute for Marine Microbiology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54443:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

text: PS101/188-1 Below Plume CTD

characteristic: description

characteristic: environment (biome)

text: hydrothermal plume [ENVO:01000130]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

text: Arctic Ocean

text: mimarks-survey

text: sediment metagenome

text: PS101/188-1 Below Plume CTD

text: sediment metagenome

text: Illumina MiSeq

text: true

text: 16S rRNA

text: water


text: public

text: 54442:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

text: PS101/188-1 Plume CTD

text: hydrothermal plume [ENVO:01000130]

text: sea water [ENVO:00002149]

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: organism

characteristic: pcr primers

characteristic: project name

text: PS101/188-1 Plume CTD

characteristic: sample description

text: sediment metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: title

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54441:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

text: PS101/188-1 Above Plume CTD

characteristic: description

characteristic: environment (biome)

text: hydrothermal plume [ENVO:01000130]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

text: Arctic Ocean

text: mimarks-survey

text: sediment metagenome

text: PS101/188-1 Above Plume CTD

text: sediment metagenome

text: Illumina MiSeq

text: true

text: 16S rRNA

text: water


text: public

text: 54440:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

text: PS101/177-1 Bottom water CTD

text: hydrothermal plume [ENVO:01000130]

text: sea water [ENVO:00002149]

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: organism

characteristic: pcr primers

characteristic: project name

text: PS101/177-1 Bottom water CTD

characteristic: sample description

text: sediment metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: title

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54439:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

text: PS101/177-1 Below Plume CTD

characteristic: description

characteristic: environment (biome)

text: hydrothermal plume [ENVO:01000130]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

text: Arctic Ocean

text: mimarks-survey

text: sediment metagenome

text: PS101/177-1 Below Plume CTD

text: sediment metagenome

text: Illumina MiSeq

text: true

text: 16S rRNA

text: water


text: public

text: 54438:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

text: PS101/177-1 Plume CTD

text: hydrothermal plume [ENVO:01000130]

text: sea water [ENVO:00002149]

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: organism

characteristic: pcr primers

characteristic: project name

text: PS101/177-1 Plume CTD

characteristic: sample description

text: sediment metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: title

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54437:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

text: PS101/177-1 Plume CTD

characteristic: description

characteristic: environment (biome)

text: hydrothermal plume [ENVO:01000130]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

text: Arctic Ocean

text: mimarks-survey

text: sediment metagenome

text: PS101/177-1 Plume CTD

text: sediment metagenome

text: Illumina MiSeq

text: true

text: 16S rRNA

text: water


text: public

text: 54436:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

text: PS101/159-1 Bottom water CTD

text: hydrothermal plume [ENVO:01000130]

text: sea water [ENVO:00002149]

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: organism

characteristic: pcr primers

characteristic: project name

text: PS101/159-1 Bottom water CTD

characteristic: sample description

text: sediment metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: title

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54435:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

text: PS101/159-1 Below Plume CTD

characteristic: description

characteristic: environment (biome)

text: hydrothermal plume [ENVO:01000130]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

text: Arctic Ocean

text: mimarks-survey

text: sediment metagenome

text: PS101/159-1 Below Plume CTD

text: sediment metagenome

text: Illumina MiSeq

text: true

text: 16S rRNA

text: water


text: public

text: 54434:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

text: PS101/159-1 Plume CTD

text: hydrothermal plume [ENVO:01000130]

text: sea water [ENVO:00002149]

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: organism

characteristic: pcr primers

characteristic: project name

text: PS101/159-1 Plume CTD

characteristic: sample description

text: sediment metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: title

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54433:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

text: PS101/159-1 Plume CTD

characteristic: description

characteristic: environment (biome)

text: hydrothermal plume [ENVO:01000130]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

text: Arctic Ocean

text: mimarks-survey

text: sediment metagenome

text: PS101/159-1 Plume CTD

text: sediment metagenome

text: Illumina MiSeq

text: true

text: 16S rRNA

text: water


text: public

text: 54432:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

text: PS101/159-1 Plume CTD

text: hydrothermal plume [ENVO:01000130]

text: sea water [ENVO:00002149]

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: organism

characteristic: pcr primers

characteristic: project name

text: PS101/159-1 Plume CTD

characteristic: sample description

text: sediment metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: title

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54431:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

text: PS101/159-1 Plume CTD

characteristic: description

characteristic: environment (biome)

text: hydrothermal plume [ENVO:01000130]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

text: Arctic Ocean

text: mimarks-survey

text: sediment metagenome

text: PS101/159-1 Plume CTD

text: sediment metagenome

text: Illumina MiSeq

text: true

text: 16S rRNA

text: water


text: public

text: 54430:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

text: PS101/159-1 Above Plume CTD

text: oceanic abissopelagic zone biome [ENVO:01000038]

text: hydrothermal plume [ENVO:01000130]

text: sea water [ENVO:00002149]

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: organism

characteristic: pcr primers

characteristic: project name

text: PS101/159-1 Above Plume CTD

characteristic: sample description

text: sediment metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: title

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54429:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

text: PS101/139-1 Bottom water CTD

characteristic: description

characteristic: environment (biome)

text: hydrothermal plume [ENVO:01000130]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

text: Arctic Ocean

text: mimarks-survey

text: sediment metagenome

text: S-D-Bact-0341-b-S-17 / S-D-Bact-0785-a-A-21

text: Microbial community from deep-sea non-buoyant hydrothermal plumes of the Gakkel Ridge (Central Arctic Ocean); M. Molari was benefited with the ERC advanced investigation grant ABYSS (294757) and with the JPIOcean (BMBF grant 03F0707A-G)

text: PS101/139-1 Bottom water CTD

text: sediment metagenome

text: Illumina MiSeq

text: true

text: 16S rRNA

text: water


text: Max Planck Institute for Marine Microbiology

text: public

text: 54428:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

text: PS101/139-1 Below Plume CTD

text: hydrothermal plume [ENVO:01000130]

text: sea water [ENVO:00002149]

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: organism

characteristic: pcr primers

characteristic: project name

text: PS101/139-1 Below Plume CTD

characteristic: sample description

text: sediment metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: title

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54427:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

text: PS101/139-1 Plume CTD

characteristic: description

characteristic: environment (biome)

text: hydrothermal plume [ENVO:01000130]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

text: Arctic Ocean

text: mimarks-survey

text: sediment metagenome

text: PS101/139-1 Plume CTD

text: sediment metagenome

text: Illumina MiSeq

text: true

text: 16S rRNA

text: water


text: public

text: 54426:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

text: PS101/139-1 Above Plume CTD

text: hydrothermal plume [ENVO:01000130]

text: sea water [ENVO:00002149]

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: organism

characteristic: pcr primers

characteristic: project name

text: PS101/139-1 Above Plume CTD

characteristic: sample description

text: sediment metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: title

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54425:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

text: PS101/112-1 Internal Reference CTD

characteristic: description

characteristic: environment (biome)

text: mid-ocean ridge [ENVO:00000406]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

text: Arctic Ocean

text: mimarks-survey

text: sediment metagenome

text: PS101/112-1 Internal Reference CTD

text: sediment metagenome

text: Illumina MiSeq

text: true

text: 16S rRNA

text: water


text: public

text: 54424:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

text: PS101/55-1 External Reference CTD

text: microbial community [PCO:1000004]

text: sea water [ENVO:00002149]

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: organism

characteristic: pcr primers

characteristic: project name

text: PS101/55-1 External Reference CTD

characteristic: sample description

text: sediment metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: title

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54423:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

text: PS86/74-1 External Reference CTD

characteristic: description

characteristic: environment (biome)

text: microbial community [PCO:1000004]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

text: Arctic Ocean

text: mimarks-survey

text: sediment metagenome

text: PS86/74-1 External Reference CTD

text: sediment metagenome

text: Illumina MiSeq

text: true

text: 16S rRNA

text: water


text: public

text: 54422:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

text: PS86/74-1 External Reference CTD

text: microbial community [PCO:1000004]

text: sea water [ENVO:00002149]

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: organism

characteristic: pcr primers

characteristic: project name

text: PS86/74-1 External Reference CTD

characteristic: sample description

text: sediment metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: title

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54421:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

text: PS86/69-1 Plume CTD

characteristic: description

characteristic: environment (biome)

text: hydrothermal plume [ENVO:01000130]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

text: Arctic Ocean

text: mimarks-survey

text: sediment metagenome

text: PS86/69-1 Plume CTD

text: sediment metagenome

text: Illumina MiSeq

text: true

text: 16S rRNA

text: water


text: public

text: 54420:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

text: PS86/69-1 Above Plume CTD

text: hydrothermal plume [ENVO:01000130]

text: sea water [ENVO:00002149]

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: organism

characteristic: pcr primers

characteristic: project name

text: PS86/69-1 Above Plume CTD

characteristic: sample description

text: sediment metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: title

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54419:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

text: PS86/66-1 Bottom water CTD

characteristic: description

characteristic: environment (biome)

text: hydrothermal plume [ENVO:01000130]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

text: Arctic Ocean

text: mimarks-survey

text: sediment metagenome

text: PS86/66-1 Bottom water CTD

text: sediment metagenome

text: Illumina MiSeq

text: true

text: 16S rRNA

text: water


text: public

text: 54418:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

text: PS86/66-1 Plume CTD

text: hydrothermal plume [ENVO:01000130]

text: sea water [ENVO:00002149]

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: organism

characteristic: pcr primers

characteristic: project name

text: PS86/66-1 Plume CTD

characteristic: sample description

text: sediment metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: title

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54417:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

text: PS86/66-1 Above Plume CTD

characteristic: description

characteristic: environment (biome)

text: hydrothermal plume [ENVO:01000130]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

text: Arctic Ocean

text: mimarks-survey

text: sediment metagenome

text: PS86/66-1 Above Plume CTD

text: sediment metagenome

text: Illumina MiSeq

text: true

text: 16S rRNA

text: water


text: public

text: 54416:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

text: PS86/57-1 Below Plume CTD

text: oceanic abissopelagic zone biome [ENVO:01000038]

text: hydrothermal plume [ENVO:01000130]

text: sea water [ENVO:00002149]

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: organism

characteristic: pcr primers

characteristic: project name

text: PS86/57-1 Below Plume CTD

characteristic: sample description

text: sediment metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: title

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54415:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

text: PS86/57-1 Plume CTD

characteristic: description

characteristic: environment (biome)

text: hydrothermal plume [ENVO:01000130]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

text: Arctic Ocean

text: mimarks-survey

text: sediment metagenome

text: S-D-Bact-0341-b-S-17 / S-D-Bact-0785-a-A-21

text: PS86/57-1 Plume CTD

text: sediment metagenome

text: Illumina MiSeq

text: true

text: 16S rRNA

text: water


text: Max Planck Institute for Marine Microbiology

text: public

text: 54414:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

text: PS86/57-1 Above Plume CTD

text: hydrothermal plume [ENVO:01000130]

text: sea water [ENVO:00002149]

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: organism

characteristic: pcr primers

text: Microbial community from deep-sea non-buoyant hydrothermal plumes of the Gakkel Ridge (Central Arctic Ocean); M. Molari was benefited with the ERC advanced investigation grant ABYSS (294757) and with the JPIOcean (BMBF grant 03F0707A-G)

characteristic: project name

text: PS86/57-1 Above Plume CTD

characteristic: sample description

text: sediment metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: title

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54413:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

text: PS86/55-1 Bottom water CTD

characteristic: description

characteristic: environment (biome)

text: hydrothermal plume [ENVO:01000130]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

text: Arctic Ocean

text: mimarks-survey

text: sediment metagenome

text: PS86/55-1 Bottom water CTD

text: sediment metagenome

text: Illumina MiSeq

text: true

text: 16S rRNA

text: water


text: public

text: 54412:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

text: PS86/55-1 Plume CTD

text: hydrothermal plume [ENVO:01000130]

text: sea water [ENVO:00002149]

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: organism

characteristic: pcr primers

characteristic: project name

text: PS86/55-1 Plume CTD

characteristic: sample description

text: sediment metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: title

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54411:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

text: PS86/55-1 Above Plume CTD

characteristic: description

characteristic: environment (biome)

text: hydrothermal plume [ENVO:01000130]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

text: Arctic Ocean

text: mimarks-survey

text: sediment metagenome

text: PS86/55-1 Above Plume CTD

text: sediment metagenome

text: Illumina MiSeq

text: true

text: 16S rRNA

text: water


text: public

text: 54410:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

text: PS86/52-1 Internal Reference CTD

text: mid-ocean ridge [ENVO:00000406]

text: sea water [ENVO:00002149]

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: organism

characteristic: pcr primers

characteristic: project name

text: PS86/52-1 Internal Reference CTD

characteristic: sample description

text: sediment metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: title

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54409:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

text: PS86/23-1 Bottom water CTD

characteristic: description

characteristic: environment (biome)

text: hydrothermal plume [ENVO:01000130]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

text: Arctic Ocean

text: mimarks-survey

text: sediment metagenome

text: PS86/23-1 Bottom water CTD

text: sediment metagenome

text: Illumina MiSeq

text: true

text: 16S rRNA

text: water


text: public

text: 54408:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

text: PS86/23-1 Plume CTD

text: hydrothermal plume [ENVO:01000130]

text: sea water [ENVO:00002149]

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: sediment metagenome

characteristic: organism

characteristic: pcr primers

characteristic: project name

text: PS86/23-1 Plume CTD

characteristic: sample description

text: sediment metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to INSDC

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

characteristic: title

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54407:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

text: PS101/230-1 Bottom water at vents CTD in situ pumps

characteristic: description

characteristic: environment (biome)

text: mid-ocean ridge [ENVO:00000406]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

text: Arctic Ocean

text: metatranscriptome

text: seawater metagenome

text: seawater metagenome

text: Illumina HiSeq 1500

text: true

text: water


text: public

text: 54406:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

text: mid-ocean ridge [ENVO:00000406]

text: sea water [ENVO:00002149]

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metatranscriptome

characteristic: investigation type

text: seawater metagenome

characteristic: organism

characteristic: project name

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text: seawater metagenome

text: Illumina HiSeq 1500

characteristic: sequencing method

text: true

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characteristic: title

text: water

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characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54405:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

characteristic: broker name

characteristic: collection date

text: PS101/188-1 plume CTD in situ pumps

characteristic: description

text: hydrothermal plume [ENVO:01000130]

text: sea water [ENVO:00002149]

text: water

text: Arctic Ocean

text: metatranscriptome

text: seawater metagenome

text: PS101/188-1 plume CTD in situ pumps

text: seawater metagenome

text: Illumina HiSeq 1500

text: true

text: water


text: public

text: 54404:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

text: PS101/181-1 plume CTD in situ pumps

characteristic: environment (biome)

text: hydrothermal plume [ENVO:01000130]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metatranscriptome

characteristic: investigation type

text: seawater metagenome

characteristic: organism

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text: PS101/181-1 plume CTD in situ pumps

characteristic: sample description

text: seawater metagenome

text: Illumina HiSeq 1500

characteristic: sequencing method

text: true

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54403:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

text: PS101/181-1 plume CTD in situ pumps

text: oceanic abissopelagic zone biome [ENVO:01000038]

text: hydrothermal plume [ENVO:01000130]

text: sea water [ENVO:00002149]

text: water

text: Arctic Ocean

text: metatranscriptome

text: seawater metagenome

text: PS101/181-1 plume CTD in situ pumps

text: seawater metagenome

text: Illumina HiSeq 1500

text: true

characteristic: submitted to INSDC

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text: water

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text: public

text: 54402:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

characteristic: broker name

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text: PS101/181-1 above plume CTD in situ pumps

characteristic: description

characteristic: environment (biome)

text: hydrothermal plume [ENVO:01000130]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

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text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metatranscriptome

characteristic: investigation type

text: seawater metagenome

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text: seawater metagenome

text: Illumina HiSeq 1500

text: true

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characteristic: ENA-CHECKLIST

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text: Max Planck Institute for Marine Microbiology

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54401:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

text: PS101/112-1 background CTD in situ pumps

text: mid-ocean ridge [ENVO:00000406]

text: sea water [ENVO:00002149]

text: water

text: Arctic Ocean

text: metatranscriptome

text: seawater metagenome

characteristic: project name

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text: seawater metagenome

text: Illumina HiSeq 1500

characteristic: sequencing method

text: true

text: water


text: public

text: 54400:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

characteristic: broker name

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text: mid-ocean ridge [ENVO:00000406]

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text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: metatranscriptome

text: seawater metagenome

text: Microbial community from deep-sea non-buoyant hydrothermal plumes of the Gakkel Ridge (Central Arctic Ocean); M. Molari was benefited with the ERC advanced investigation grant ABYSS (294757) and with the JPIOcean (BMBF grant 03F0707A-G)

text: seawater metagenome

text: Illumina HiSeq 1500

text: true

characteristic: submitted to INSDC

characteristic: title

text: water

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characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54399:51db5f48-99bc-4d05-a72d-d7e4511a82a6

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text: GFBIO

text: mid-ocean ridge [ENVO:00000406]

text: sea water [ENVO:00002149]

text: water

text: Arctic Ocean

characteristic: geographic location (longitude)

text: metatranscriptome

characteristic: investigation type

text: seawater metagenome

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text: seawater metagenome

text: Illumina HiSeq 1500

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text: mid-ocean ridge [ENVO:00000406]

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text: sea water [ENVO:00002149]

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text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

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characteristic: geographic location (latitude)

text: metatranscriptome

text: seawater metagenome

characteristic: project name

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text: seawater metagenome

text: Illumina HiSeq 1500

characteristic: sequencing method

text: true

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54397:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

text: PS101/55-1 seawater CTD in situ pumps

text: microbial community [PCO:1000004]

text: sea water [ENVO:00002149]

text: water

text: Arctic Ocean

text: metatranscriptome

text: seawater metagenome

text: PS101/55-1 seawater CTD in situ pumps

text: seawater metagenome

text: Illumina HiSeq 1500

text: true

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text: water

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text: public

text: 54396:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

characteristic: broker name

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text: PS101/55-1 seawater CTD in situ pumps

characteristic: description

characteristic: environment (biome)

text: microbial community [PCO:1000004]

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text: sea water [ENVO:00002149]

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text: water

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text: Arctic Ocean

characteristic: geographic location (country and/or sea)

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characteristic: geographic location (longitude)

text: metatranscriptome

characteristic: investigation type

text: seawater metagenome

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text: PS101/55-1 seawater CTD in situ pumps

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54395:51db5f48-99bc-4d05-a72d-d7e4511a82a6

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text: GFBIO

text: PS101/55-1 seawater CTD in situ pumps

text: microbial community [PCO:1000004]

text: sea water [ENVO:00002149]

text: water

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text: sea water [ENVO:00002149]

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text: water

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text: Arctic Ocean

characteristic: geographic location (country and/or sea)

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characteristic: geographic location (latitude)

text: metatranscriptome

text: seawater metagenome

text: PS101/55-1 seawater CTD in situ pumps

text: seawater metagenome

text: Illumina HiSeq 1500

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characteristic: submitted to INSDC

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text: water

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characteristic: ENA-CHECKLIST

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54393:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

text: PS101/230-1 Bottom water at vents CTD in situ pumps

text: mid-ocean ridge [ENVO:00000406]

text: sea water [ENVO:00002149]

text: water

text: Arctic Ocean

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: seawater metagenome

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text: seawater metagenome

text: Illumina MiSeq

text: true

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text: public

text: 54392:51db5f48-99bc-4d05-a72d-d7e4511a82a6

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characteristic: broker name

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text: mid-ocean ridge [ENVO:00000406]

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text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: metagenome

text: seawater metagenome

characteristic: project name

characteristic: sample description

text: seawater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

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characteristic: ENA-CHECKLIST

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54391:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

text: PS101/188-1 plume CTD in situ pumps

text: oceanic abissopelagic zone biome [ENVO:01000038]

text: hydrothermal plume [ENVO:01000130]

text: sea water [ENVO:00002149]

text: water

text: Arctic Ocean

text: metagenome

text: seawater metagenome

text: PS101/188-1 plume CTD in situ pumps

text: seawater metagenome

text: Illumina MiSeq

text: true

characteristic: submitted to INSDC

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text: public

text: 54390:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

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text: PS101/188-1 plume CTD in situ pumps

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characteristic: environment (biome)

text: hydrothermal plume [ENVO:01000130]

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text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

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text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: seawater metagenome

characteristic: organism

text: PS101/188-1 plume CTD in situ pumps

text: seawater metagenome

text: Illumina MiSeq

text: true

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characteristic: ENA-CHECKLIST

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characteristic: External Id

text: Max Planck Institute for Marine Microbiology

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54389:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

text: PS101/188-1 plume CTD in situ pumps

text: hydrothermal plume [ENVO:01000130]

text: sea water [ENVO:00002149]

text: water

text: Arctic Ocean

text: metagenome

text: seawater metagenome

characteristic: project name

text: PS101/188-1 plume CTD in situ pumps

characteristic: sample description

text: seawater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

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text: 54388:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

characteristic: broker name

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text: PS101/181-1 plume CTD in situ pumps

characteristic: description

characteristic: environment (biome)

text: hydrothermal plume [ENVO:01000130]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: metagenome

text: seawater metagenome

text: PS101/181-1 plume CTD in situ pumps

text: seawater metagenome

text: Illumina MiSeq

text: true

characteristic: submitted to INSDC

characteristic: title

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54387:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

text: PS86/55-1 plume CTD in situ pumps

text: hydrothermal plume [ENVO:01000130]

text: sea water [ENVO:00002149]

text: water

text: Arctic Ocean

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: seawater metagenome

characteristic: organism

text: PS86/55-1 plume CTD in situ pumps

text: seawater metagenome

text: Illumina MiSeq

text: true

text: water


text: public

text: 54386:51db5f48-99bc-4d05-a72d-d7e4511a82a6

text: GFBIO

characteristic: broker name

characteristic: collection date

text: PS86/55-1 above plume CTD in situ pumps

characteristic: description

characteristic: environment (biome)

text: hydrothermal plume [ENVO:01000130]

characteristic: environment (feature)

text: sea water [ENVO:00002149]

characteristic: environment (material)

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: metagenome

text: seawater metagenome

text: Microbial community from deep-sea non-buoyant hydrothermal plumes of the Gakkel Ridge (Central Arctic Ocean); M. Molari was benefited with the ERC advanced investigation grant ABYSS (294757) and with the JPIOcean (BMBF grant 03F0707A-G)

characteristic: project name

text: PS86/55-1 above plume CTD in situ pumps

characteristic: sample description

text: seawater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

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characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: 54385:51db5f48-99bc-4d05-a72d-d7e4511a82a6

characteristic: Submitter Id

text: GFBIO

text: PS86/43-1 plume CTD in situ pumps

text: hydrothermal plume [ENVO:01000130]

text: sea water [ENVO:00002149]

text: water

text: Arctic Ocean

text: metagenome

text: seawater metagenome

text: PS86/43-1 plume CTD in situ pumps

text: seawater metagenome

text: Illumina MiSeq

text: true

characteristic: submitted to INSDC

characteristic: title

text: water

characteristic: water environmental package