characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: description

text: atlantic

text: Southern Ocean

text: metagenome-assembled genome

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured Planktomarina sp.

characteristic: organism

text: uncultured Planktomarina sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: ERR3525250_binner12_Refined_61

characteristic: title


status: PUBLIC

tag: attribute

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run ERR3525250 of study ERP117360.

text: atlantic

characteristic: environmental medium

text: Southern Ocean

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured euryarchaeote

text: 22 environmental metagenomic surface water (20 m depth) samples from two transects to the Southern and Atlantic Ocean (RV Polarstern ANT-XXVIII/4 and ANT-XXVIII/5 in 2012). Samples were filtered on 0.2µm polycarbonate filters and stored at -80°C until extraction and sequencing unsing an Illumina HiSeq 25002500.

characteristic: project name

characteristic: sample derived from

text: uncultured euryarchaeote

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR3525250_concoct_25


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run ERR3525247 of study ERP117360.

characteristic: description

text: atlantic

text: Southern Ocean

text: metagenome-assembled genome

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured Gammaproteobacteria bacterium

characteristic: organism

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: ERR3525247_concoct_80

characteristic: title


text: EMG

text: public

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: atlantic

characteristic: environmental medium

text: Southern Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Candidatus Puniceispirillum sp.

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: ERR3525250_metabat2_39


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run ERR3525249 of study ERP117360.

characteristic: description

text: atlantic

text: Southern Ocean

text: metagenome-assembled genome

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured Flavobacteriaceae bacterium

text: uncultured Flavobacteriaceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR3525249_binner13_Refined_1


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

text: public

text: JOSEPH SCHUBERT | JONAH WALKER

text: UNIVERSITY OF SYDNEY | SANGER INSTITUTE, UNIVERSITY OF CAMBRIDGE

characteristic: collecting institution

characteristic: collection date

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Queensland

characteristic: geographic location (region and locality)

text: NOT PROVIDED

characteristic: habitat

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: juvenile

characteristic: lifestage

text: unidentified

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

text: unidentified

text: NOT COLLECTED

characteristic: sex

text: NOT APPLICABLE

text: N

characteristic: symbiont

characteristic: title

characteristic: tolid


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: JOSEPH SCHUBERT | JONAH WALKER

text: Australia

text: Queensland

text: NOT PROVIDED

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: adult

text: unidentified

text: WHOLE ORGANISM

text: ToL

characteristic: project name

text: unidentified

text: MALE

text: NOT APPLICABLE

text: N


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

text: public

text: JOSEPH SCHUBERT | JONAH WALKER

characteristic: collecting institution

characteristic: collection date

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Queensland

text: NOT PROVIDED

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: adult

text: unidentified

text: WHOLE ORGANISM

text: ToL

text: unidentified

text: FEMALE

text: NOT APPLICABLE

text: N


text: Sanger Institute

text: NOT PROVIDED

text: Tree of Life Programme

text: public

text: JOSEPH SCHUBERT | JONAH WALKER

text: Australia

text: New South Wales

characteristic: geographic location (region and locality)

text: NOT PROVIDED

characteristic: habitat

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: adult

characteristic: lifestage

text: unidentified

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

text: unidentified

text: MALE

characteristic: sex

text: NOT APPLICABLE

text: N


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

text: JOSEPH SCHUBERT | JONAH WALKER

text: Australia

text: New South Wales

text: NOT PROVIDED

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: adult

text: unidentified

text: WHOLE ORGANISM

text: ToL

text: unidentified

text: FEMALE

text: NOT APPLICABLE

text: N

characteristic: symbiont

characteristic: title

characteristic: tolid


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: JOSEPH SCHUBERT | JONAH WALKER

characteristic: collecting institution

text: Australia

text: Western Australia

text: NOT PROVIDED

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: adult

text: unidentified

text: WHOLE ORGANISM

text: ToL

characteristic: project name

text: unidentified

text: MALE

text: NOT APPLICABLE

text: N


text: Sanger Institute

text: NOT PROVIDED

text: Tree of Life Programme

text: public

text: JOSEPH SCHUBERT | JONAH WALKER

characteristic: collection date

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Western Australia

characteristic: geographic location (region and locality)

text: NOT PROVIDED

characteristic: habitat

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: adult

text: unidentified

text: WHOLE ORGANISM

text: ToL

text: unidentified

text: FEMALE

text: NOT APPLICABLE

text: N


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: NOT PROVIDED

text: Tree of Life Programme

text: public

text: JOSEPH SCHUBERT | JONAH WALKER

text: Australia

text: South Australia

text: NOT PROVIDED

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: adult

characteristic: lifestage

text: unidentified

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

text: unidentified

text: MALE

characteristic: sex

text: NOT APPLICABLE

text: N


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: JOSEPH SCHUBERT | JONAH WALKER

text: Australia

text: South Australia

text: NOT PROVIDED

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: adult

text: unidentified

text: WHOLE ORGANISM

text: ToL

text: unidentified

text: FEMALE

text: NOT APPLICABLE

text: N

characteristic: symbiont

characteristic: title

characteristic: tolid


text: Sanger Institute

text: NOT PROVIDED

text: Tree of Life Programme

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: JOSEPH SCHUBERT | JONAH WALKER

characteristic: collecting institution

characteristic: collection date

text: Australia

characteristic: geographic location (country and/or sea)

text: New South Wales

text: NOT PROVIDED

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: not collected

text: unidentified

text: WHOLE ORGANISM

text: ToL

characteristic: project name

text: unidentified

text: NOT COLLECTED

text: NOT APPLICABLE

text: N


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: NOT PROVIDED

text: Tree of Life Programme

text: public

text: JOSEPH SCHUBERT | JONAH WALKER

text: Australia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Victoria

characteristic: geographic location (region and locality)

text: NOT PROVIDED

characteristic: habitat

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: adult

text: unidentified

text: WHOLE ORGANISM

text: ToL

text: unidentified

text: FEMALE

text: NOT APPLICABLE

text: N


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

text: JOSEPH SCHUBERT | JONAH WALKER

text: Australia

text: Victoria

text: NOT PROVIDED

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: adult

characteristic: lifestage

text: unidentified

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

text: unidentified

text: MALE

characteristic: sex

text: NOT APPLICABLE

text: N


text: Sanger Institute

text: NOT PROVIDED

text: Tree of Life Programme

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: JOSEPH SCHUBERT | JONAH WALKER

text: Australia

text: New South Wales

text: NOT PROVIDED

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: juvenile

text: unidentified

text: WHOLE ORGANISM

text: ToL

text: unidentified

text: NOT COLLECTED

text: NOT APPLICABLE

text: N

characteristic: symbiont

characteristic: title

characteristic: tolid


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: NOT PROVIDED

text: Tree of Life Programme

text: public

text: JOSEPH SCHUBERT | JONAH WALKER

characteristic: collecting institution

characteristic: collection date

text: Australia

characteristic: geographic location (country and/or sea)

text: Western Australia

text: NOT PROVIDED

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: juvenile

text: unidentified

text: WHOLE ORGANISM

text: ToL

characteristic: project name

text: unidentified

text: MALE

text: NOT APPLICABLE

text: N


text: Sanger Institute

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC center name

text: public

text: JOSEPH SCHUBERT | JONAH WALKER

text: Australia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Queensland

characteristic: geographic location (region and locality)

text: NOT PROVIDED

characteristic: habitat

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: juvenile

text: unidentified

text: WHOLE ORGANISM

characteristic: sample same as

text: unidentified

text: NOT COLLECTED

text: NOT APPLICABLE

text: N


text: Sanger Institute

text: Tree of Life Programme

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: JOSEPH SCHUBERT | JONAH WALKER

text: Australia

text: Queensland

text: NOT PROVIDED

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: adult

characteristic: lifestage

text: unidentified

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: unidentified

text: MALE

characteristic: sex

text: NOT APPLICABLE

text: N


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: Tree of Life Programme

text: public

text: JOSEPH SCHUBERT | JONAH WALKER

characteristic: collecting institution

characteristic: collection date

text: Australia

text: Queensland

text: NOT PROVIDED

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: adult

text: unidentified

text: WHOLE ORGANISM

text: unidentified

text: FEMALE

text: NOT APPLICABLE

text: N

characteristic: symbiont

characteristic: title

characteristic: tolid


text: Sanger Institute

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC center name

text: public

text: JOSEPH SCHUBERT | JONAH WALKER

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: New South Wales

characteristic: geographic location (region and locality)

text: NOT PROVIDED

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: adult

text: unidentified

text: WHOLE ORGANISM

characteristic: project name

text: unidentified

text: MALE

text: NOT APPLICABLE

text: N


text: Sanger Institute

text: Tree of Life Programme

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: JOSEPH SCHUBERT | JONAH WALKER

text: Australia

text: New South Wales

text: NOT PROVIDED

characteristic: habitat

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: adult

characteristic: lifestage

text: unidentified

characteristic: organism

text: WHOLE ORGANISM

characteristic: sample same as

text: unidentified

text: FEMALE

text: NOT APPLICABLE

text: N


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: Tree of Life Programme

text: public

text: JOSEPH SCHUBERT | JONAH WALKER

characteristic: collecting institution

characteristic: collection date

text: Australia

text: Western Australia

text: NOT PROVIDED

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: adult

text: unidentified

text: WHOLE ORGANISM

characteristic: organism part

text: unidentified

text: MALE

characteristic: sex

text: NOT APPLICABLE

text: N

characteristic: symbiont


text: Sanger Institute

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC center name

text: public

text: JOSEPH SCHUBERT | JONAH WALKER

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Western Australia

text: NOT PROVIDED

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: adult

text: unidentified

text: WHOLE ORGANISM

text: unidentified

text: FEMALE

text: NOT APPLICABLE

text: N

characteristic: title

characteristic: tolid


text: Sanger Institute

text: Tree of Life Programme

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: JOSEPH SCHUBERT | JONAH WALKER

text: Australia

text: South Australia

characteristic: geographic location (region and locality)

text: NOT PROVIDED

characteristic: habitat

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: adult

characteristic: lifestage

text: unidentified

text: LEG

characteristic: project name

characteristic: sample derived from

text: unidentified

text: MALE

text: NOT APPLICABLE

text: N


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: Tree of Life Programme

text: public

text: JOSEPH SCHUBERT | JONAH WALKER

characteristic: collecting institution

characteristic: collection date

text: Australia

text: South Australia

text: NOT PROVIDED

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: adult

text: unidentified

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

characteristic: sample same as

text: unidentified

text: FEMALE

characteristic: sex

text: NOT APPLICABLE

text: N


text: Sanger Institute

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC center name

text: public

text: JOSEPH SCHUBERT | JONAH WALKER

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: New South Wales

text: NOT PROVIDED

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: not collected

text: unidentified

text: WHOLE ORGANISM

text: unidentified

text: NOT COLLECTED

text: NOT APPLICABLE

text: N

characteristic: symbiont

characteristic: title

characteristic: tolid


text: Sanger Institute

text: Tree of Life Programme

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: JOSEPH SCHUBERT | JONAH WALKER

text: Australia

text: Victoria

characteristic: geographic location (region and locality)

text: NOT PROVIDED

characteristic: habitat

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: adult

characteristic: lifestage

text: unidentified

text: WHOLE ORGANISM

characteristic: project name

text: unidentified

text: FEMALE

text: NOT APPLICABLE

text: N


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: Tree of Life Programme

text: public

text: JOSEPH SCHUBERT | JONAH WALKER

characteristic: collecting institution

characteristic: collection date

text: Australia

text: Victoria

text: NOT PROVIDED

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: adult

text: unidentified

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

characteristic: sample same as

text: unidentified

text: MALE

text: NOT APPLICABLE

text: N


text: Sanger Institute

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC center name

text: public

text: JOSEPH SCHUBERT | JONAH WALKER

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: New South Wales

text: NOT PROVIDED

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: juvenile

text: unidentified

text: WHOLE ORGANISM

text: unidentified

text: NOT COLLECTED

characteristic: sex

text: NOT APPLICABLE

text: N

characteristic: symbiont


text: Sanger Institute

text: Tree of Life Programme

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: JOSEPH SCHUBERT | JONAH WALKER

text: Australia

text: Western Australia

characteristic: geographic location (region and locality)

text: NOT PROVIDED

characteristic: habitat

text: JOSEPH SCHUBERT

text: UNIVERSITY OF SYDNEY

text: juvenile

text: unidentified

text: WHOLE ORGANISM

text: unidentified

text: MALE

text: NOT APPLICABLE

text: N

characteristic: title

characteristic: tolid


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Anthony Smith, NICD

text: public

text: EnteroBase

characteristic: broker name

text: EnteroBase

text: A. Smith, National Institute for Communicable Diseases

characteristic: collection date

text: Whole genome sequencing data uploaded by EnteroBase user

characteristic: description

text: South Africa

text: Western Cape

text: Human, Stool

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Agona

characteristic: serovar

characteristic: strain


text: Anthony Smith, NICD

characteristic: INSDC center name

text: public

text: EnteroBase

text: EnteroBase

text: South Africa

characteristic: geographic location (country and/or sea)

text: KwaZulu-Natal

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Typhimurium


text: Anthony Smith, NICD

text: public

characteristic: INSDC status

text: EnteroBase

text: EnteroBase

text: South Africa

text: Western Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Newport


text: Anthony Smith, NICD

text: public

characteristic: SRA accession

text: EnteroBase

text: EnteroBase

text: South Africa

text: Eastern Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica


text: Anthony Smith, NICD

text: public

characteristic: Submitter Id

text: EnteroBase

text: EnteroBase

text: South Africa

text: Eastern Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Bovismorbificans


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa

text: Western Cape

characteristic: geographic location (region and locality)

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Typhimurium


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa

text: Western Cape

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Dublin


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa

text: Western Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Dublin


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa

text: Western Cape

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Typhimurium


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa

text: KwaZulu-Natal

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Bovismorbificans


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa

text: Western Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa

text: Western Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Chester


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa

text: Eastern Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Typhimurium


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa

text: Eastern Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Saintpaul


E-MTAB-11263:clf-29 lhp1-4 1

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BPMP, CNRS

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-11263:clf-29 lhp1-4 1

tag: Namespace:BPMP, CNRS

unit: week

characteristic: age

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: cultivar

text: Protocols: Samples were collected in liquid nitrogen Plants are grown in hydroponics on 0.3 mM KNO3 for 5 weeks Trizol Reagent and purification on columns mRNA selection using Poly-A tail

text: mid rosette growth stage

characteristic: developmental stage

text: clf-29 lhp1-4

characteristic: genotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: root

characteristic: organism part

text: Arabidopsis thaliana

text: clf-29 lhp1-4 1


E-MTAB-11263:clf-29 lhp1-4 2

characteristic: ENA-CHECKLIST

text: BPMP, CNRS

characteristic: INSDC center name

text: public

text: E-MTAB-11263:clf-29 lhp1-4 2

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: description

text: mid rosette growth stage

text: clf-29 lhp1-4

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: root

text: Arabidopsis thaliana

text: clf-29 lhp1-4 2

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: BPMP, CNRS

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: thale cress

text: mid rosette growth stage

text: wild type genotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: root

text: Arabidopsis thaliana


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: National Veterinary Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:National Veterinary Institute

text: Carbapenem-resistant Enterobacter asburiae sampled from Swedish feed mill in 2019 carrying blaIMI-2 gene.

text: Enterobacter asburiae

text: Enterobacter asburiae


text: National Veterinary Institute

text: public

text: Carbapenem-resistant Enterobacter mori isolated from human clinical sample in 2018 carrying blaIMI-2 gene.

text: Enterobacter mori

text: Enterobacter mori


text: National Veterinary Institute

text: public

text: Carbapenem-resistant Enterobacter ludwigii isolated from human clinical sample in 2020 carrying blaIMI-2 gene.

text: Enterobacter ludwigii

text: Enterobacter ludwigii


text: National Veterinary Institute

text: public

text: Carbapenem-resistant Enterobacter mori isolated from human clinical sample in 2020 carrying blaIMI-2 gene.

text: Enterobacter mori

text: Enterobacter mori


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

text: public

tag: Namespace:Tree of Life Programme

text: JONAH WALKER

text: SANGER INSTITUTE, UNIVERSITY OF CAMBRIDGE

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Cambridgeshire | Cambridge | Oxford Road

characteristic: geographic location (region and locality)

text: BRICK WALL

characteristic: habitat

text: JONAH WALKER

text: adult

characteristic: lifestage

text: Salticus scenicus

text: WHOLE ORGANISM

text: ToL

characteristic: project name

text: Salticus scenicus

text: NOT COLLECTED

characteristic: sex

text: N

characteristic: symbiont

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Sanger Institute

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: JONAH WALKER

text: United Kingdom

text: BRICK WALL

text: JONAH WALKER

text: adult

text: Pseudeuophrys lanigera

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

text: Pseudeuophrys lanigera

text: NOT COLLECTED

text: N

characteristic: title


characteristic: External Id

text: Sanger Institute

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: JONAH WALKER

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: BRICK WALL

text: JONAH WALKER

text: adult

text: Salticus scenicus

text: WHOLE ORGANISM

characteristic: sample same as

text: Salticus scenicus

text: NOT COLLECTED

text: N


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Sanger Institute

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: JONAH WALKER

text: United Kingdom

text: BRICK WALL

characteristic: habitat

text: JONAH WALKER

text: adult

characteristic: lifestage

text: Pseudeuophrys lanigera

text: WHOLE ORGANISM

characteristic: project name

text: Pseudeuophrys lanigera

text: NOT COLLECTED

characteristic: sex

text: N

characteristic: symbiont

characteristic: tolid


P. halstedii

characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: P. halstedii

tag: Namespace:Senckenberg Biodiversity and Climate Research Institute

characteristic: Submitter Id

text: P. halstedii infection in sunflower time points and transcriptome

characteristic: description

text: Plasmopara halstedii

characteristic: organism

text: Plasmopara halstedii

text: Plasmopara halstedii

characteristic: title


text: modern DNA

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Victoria Univerisity of Wellington

text: public

tag: Namespace:Victoria Univerisity of Wellington

text: Victoria University of Wellington, New Zealand

text: squirefish

characteristic: common name

text: fin clip sample Austrlation snapper (Chrysopgrys auratus)

text: New Zealand

characteristic: geographic location (country and/or sea)

text: Hauraki Gulf

characteristic: geographic location (region and locality)

text: Pagrus auratus

text: Pagrus auratus


text: modern DNA

text: Victoria Univerisity of Wellington

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: squirefish

text: New Zealand

text: Northland

text: Pagrus auratus

text: Pagrus auratus


text: modern DNA

text: Victoria Univerisity of Wellington

text: public

text: squirefish

text: New Zealand

text: Bay of Plenty

text: Pagrus auratus

text: Pagrus auratus


text: modern DNA

text: Victoria Univerisity of Wellington

text: public

text: squirefish

text: New Zealand

text: East Cape

text: Pagrus auratus

text: Pagrus auratus


text: modern DNA

text: Victoria Univerisity of Wellington

text: public

text: squirefish

text: New Zealand

text: Gisbourne

text: Pagrus auratus

text: Pagrus auratus


text: modern DNA

text: Victoria Univerisity of Wellington

text: public

text: squirefish

text: New Zealand

text: Hawkes Bay

text: Pagrus auratus

text: Pagrus auratus


text: modern DNA

text: Victoria Univerisity of Wellington

text: public

text: squirefish

text: New Zealand

text: Tasman Bay

text: Pagrus auratus

text: Pagrus auratus


text: modern DNA

text: Victoria Univerisity of Wellington

text: public

text: squirefish

text: New Zealand

text: Karamea Bight

text: Pagrus auratus

text: Pagrus auratus


text: modern DNA

text: Victoria Univerisity of Wellington

text: public

text: squirefish

text: New Zealand

text: Kapiti Coast

text: Pagrus auratus

text: Pagrus auratus


text: modern DNA

text: Victoria Univerisity of Wellington

text: public

text: squirefish

text: New Zealand

text: West Coast

text: Pagrus auratus

text: Pagrus auratus


text: ancient DNA

text: Victoria Univerisity of Wellington

text: public

text: 1280-1450 CE

text: Cross Creek

text: Te Papa museum, Wellington, New Zealand

text: squirefish

text: bone sample Austrlation snapper (Chrysopgrys auratus)

text: New Zealand

text: Bay of Plenty

text: Pagrus auratus

text: Pagrus auratus


text: ancient DNA

text: Victoria Univerisity of Wellington

text: public

text: 1280-1450 CE

text: Sunde

text: Te Papa museum, Wellington, New Zealand

text: squirefish

text: New Zealand

text: Hauraki Gulf

text: Pagrus auratus

text: Pagrus auratus


text: ancient DNA

text: Victoria Univerisity of Wellington

text: public

text: 1280-1450 CE

text: Hotwater beach

text: Te Papa museum, Wellington, New Zealand

text: squirefish

text: New Zealand

text: Bay of Plenty

text: Pagrus auratus

text: Pagrus auratus


text: ancient DNA

text: Victoria Univerisity of Wellington

text: public

text: 1650-1800 CE

text: Mana Island North

text: Te Papa museum, Wellington, New Zealand

text: squirefish

text: New Zealand

text: Kapiti Coast

text: Pagrus auratus

text: Pagrus auratus


text: ancient DNA

text: Victoria Univerisity of Wellington

text: public

text: 1280-1450 CE

text: Mana Island South

text: Te Papa museum, Wellington, New Zealand

text: squirefish

text: New Zealand

text: Kapiti Coast

text: Pagrus auratus

text: Pagrus auratus


text: ancient DNA

text: Victoria Univerisity of Wellington

text: public

text: 1280-1450 CE

text: Rotokura

text: Te Papa museum, Wellington, New Zealand

text: squirefish

text: New Zealand

text: Tasman Bay

text: Pagrus auratus

text: Pagrus auratus


text: public

tag: Namespace:Centre for Genomic Regulation (CRG), The Barcelona Institute for Science and Technology (BIST), Barcelona , Catalonia, Spain.

unit: hour

characteristic: age

text: ArrayExpress

characteristic: broker name

text: fruit fly

text: Protocols: Tissues were dissected in PBS1x Tissues were fixed for 10 min in 1%FA and sonicated 20 minutes ON/OFF with a bioruptor high intensity FLEA-ChIP protocol

text: L3 larva

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: eye disc

characteristic: organism part

text: Drosophila melanogaster

text: mixed

characteristic: sex

text: Canton S

characteristic: strain


characteristic: External Id

text: Centre for Genomic Regulation (CRG), The Barcelona Institute for Science and Technology (BIST), Barcelona , Catalonia, Spain.

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: fruit fly

characteristic: description

text: L3 larva

text: wild type genotype

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: eye disc

text: Drosophila melanogaster

text: mixed

text: Canton S


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: ArrayExpress

text: fruit fly

characteristic: common name

text: pupal stage

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: eye

text: Drosophila melanogaster

text: mixed

text: Canton S

characteristic: title


characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: age

text: ArrayExpress

characteristic: broker name

text: fruit fly

text: pupal stage

characteristic: developmental stage

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: eye disc

text: Drosophila melanogaster

text: mixed

text: Canton S


characteristic: External Id

text: public

text: ArrayExpress

text: fruit fly

text: L3 larva

text: wild type genotype

characteristic: genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: prothoracic leg disc

characteristic: organism part

text: Drosophila melanogaster

text: mixed

characteristic: sex

text: Canton S

characteristic: strain


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: fruit fly

characteristic: description

text: pupal stage

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: leg

text: Drosophila melanogaster

text: mixed

text: Canton S


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: ArrayExpress

text: fruit fly

characteristic: common name

text: pupal stage

text: wild type genotype

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: lateral geniculate body

text: Drosophila melanogaster

text: mixed

text: Canton S


characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: age

text: ArrayExpress

characteristic: broker name

text: fruit fly

text: pupal stage

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: prothoracic leg disc

text: Drosophila melanogaster

text: mixed

text: Canton S

characteristic: title


characteristic: External Id

text: public

text: ArrayExpress

text: fruit fly

text: L3 larva

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: wing disc

characteristic: organism part

text: Drosophila melanogaster

text: mixed

characteristic: sex

text: Canton S


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: fruit fly

text: pupal stage

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: wing

text: Drosophila melanogaster

text: mixed

text: Canton S

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: ArrayExpress

text: fruit fly

characteristic: common name

characteristic: description

text: pupal stage

text: wild type genotype

text: Drosophila melanogaster

text: Drosophila melanogaster

text: wing disc

text: Drosophila melanogaster

text: mixed

text: Canton S


text: ETH ZURICH

characteristic: INSDC center name

text: public

characteristic: INSDC status

tag: Namespace:ETH ZURICH

text: mouse gut

characteristic: environment (biome)

text: mouse caecum

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: adult

characteristic: host life stage

text: F

characteristic: host sex

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: mouse gut metagenome

characteristic: organism

text: Rearing environment persistently modulates the phenotype of mice

characteristic: project name

text: mouse gut metagenome

text: Illumina

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ETH ZURICH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: description

text: mouse gut

text: mouse caecum

text: caecal content

text: Switzerland

text: adult

text: F

text: host-associated

text: metagenome

text: mouse gut metagenome

text: mouse gut metagenome

text: Illumina

characteristic: title


text: ETH ZURICH

text: public

text: mouse gut

characteristic: environment (biome)

text: mouse caecum

characteristic: environment (feature)

text: caecal content

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: adult

characteristic: host life stage

text: M

characteristic: host sex

characteristic: host subject id

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: metagenome

text: mouse gut metagenome

text: mouse gut metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ETH ZURICH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: mouse gut

text: mouse caecum

text: caecal content

text: Switzerland

text: adult

text: M

text: host-associated

text: metagenome

characteristic: investigation type

text: mouse gut metagenome

characteristic: organism

characteristic: project name

text: mouse gut metagenome

text: Illumina

characteristic: sequencing method


text: ETH ZURICH

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: description

text: Blank/Mock

characteristic: environment (biome)

text: Blank/Mock

characteristic: environment (feature)

text: Blank/Mock

characteristic: environment (material)

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: host-associated

text: metagenome

text: mouse gut metagenome

text: mouse gut metagenome

text: Illumina

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ETH ZURICH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Blank/Mock

text: Blank/Mock

text: Blank/Mock

text: Switzerland

text: TODO

characteristic: host sex

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

text: metagenome

text: mouse gut metagenome

text: mouse gut metagenome

text: Illumina


text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Department of Microbiology, Tumor, and Cell Biology, Karolinska Institute; Science for Life Laboratory, Sweden

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: hepatocyte

text: human

characteristic: common name

text: Protocols: Cells were harvest using trypsin-EDTA solution (Sigma). Trypsin was subsequently inactivated with a minimum of 3-fold surplus of culture medium. Cells were pelleted and washed once with 1xPBS. Genomic DNA of was extracted using Quick-DNA kit (Zymo Research) according to manufacturer’s protocol. The genomic DNA was used to perform Xdrop. In short, the genomic DNA was compartmentalized into droplets and enriched for the target region. The target-enriched DNA molecules were further used for droplet multiple displacement amplification (dMDA). Afterwards, amplified DNA was treated by T7 Endonuclease I, followed by size selection, end-repair, barcoding, and adaptor ligation.

characteristic: description

text: adult

characteristic: developmental stage

text: hepatocellular carcinoma

characteristic: disease

text: Cas9 deletion of the intergenic region between tRNA-Cys-GCA-2-3 and tRNA-Cys-GCA-2-4

characteristic: genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: liver

characteristic: organism part

text: Homo sapiens


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Department of Microbiology, Tumor, and Cell Biology, Karolinska Institute; Science for Life Laboratory, Sweden

characteristic: INSDC center name

text: public

text: ArrayExpress

text: hepatocyte

text: human

text: adult

text: hepatocellular carcinoma

text: Cas9 deletion of tRNA-Cys-GCA-2-3 and tRNA-Cys-GCA-2-4

text: Homo sapiens

text: Homo sapiens

text: liver

text: Homo sapiens

characteristic: title


E-MTAB-11329:Sample 1

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11329:Sample 1

tag: Namespace:Mendel center for Plant Genomics and Proteomics, Central European Institute of Technology (CEITEC), Masaryk University, Kamenice, 62500 Brno, Czech Republic

unit: day

characteristic: age

text: ArrayExpress

text: thale cress

text: Protocols: 7-day old seedlings post-treatment were collected and frozen immediately in liquid nitrogen and stored at -80°C for further processing. Plants were grown under 16h light. Total RNA is extracted using the Trizol method followed by DNase treatment as per the manufacturer's instructions. RNA Integrity is quantified using an Agilent 2100 Bioanalyzer and RNA 6000 pico kit. RNA quality RIN > 8 were selected for library preparation. Libraries are prepared using NEBNext® Ultra II RNA Library Prep Kit for Illumina® as per the manufacturer's protocol with a starting concentration of 2ug.

text: seedling development stage

characteristic: ecotype

text: wild type genotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole organism

text: biological replicate

characteristic: replicate

text: Arabidopsis thaliana

text: Sample 1


E-MTAB-11329:Sample 2

text: Mendel center for Plant Genomics and Proteomics, Central European Institute of Technology (CEITEC), Masaryk University, Kamenice, 62500 Brno, Czech Republic

text: public

characteristic: SRA accession

text: E-MTAB-11329:Sample 2

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

characteristic: description

text: seedling development stage

characteristic: developmental stage

text: wild type genotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole organism

text: biological replicate

text: Arabidopsis thaliana

text: Sample 2


E-MTAB-11329:Sample 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11329:Sample 3

text: ArrayExpress

text: thale cress

text: seedling development stage

text: wild type genotype

characteristic: genotype

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: whole organism

characteristic: organism part

text: biological replicate

text: Arabidopsis thaliana

text: Sample 3


E-MTAB-11329:Sample 4

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11329:Sample 4

text: ArrayExpress

text: thale cress

text: seedling development stage

text: wild type genotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole organism

text: biological replicate

text: Arabidopsis thaliana

text: Sample 4

characteristic: title


E-MTAB-11329:Sample 5

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11329:Sample 5

characteristic: age

text: ArrayExpress

text: thale cress

text: seedling development stage

characteristic: ecotype

text: wild type genotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole organism

text: biological replicate

characteristic: replicate

text: Arabidopsis thaliana

text: Sample 5


E-MTAB-11329:Sample 6

text: public

characteristic: SRA accession

text: E-MTAB-11329:Sample 6

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

characteristic: description

text: seedling development stage

text: wild type genotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: whole organism

text: biological replicate

text: Arabidopsis thaliana

text: Sample 6


WGF

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: VRIJE UNIVERSITEIT BRUSSEL

text: public

text: WGF

tag: Namespace:VRIJE UNIVERSITEIT BRUSSEL

text: Vrije Universiteit Brussel and CERELA-CONICET

text: fruit surface of white guava fruits

text: Argentina

characteristic: geographic location (country and/or sea)

text: Tucum�n province

characteristic: geographic location (region and locality)

text: metagenome

characteristic: organism

text: metagenome

text: white guava fruits


MFC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VRIJE UNIVERSITEIT BRUSSEL

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: MFC

text: surface of closed medlar flowers

text: Argentina

text: Tucum�n province

text: metagenome

text: metagenome

text: closed medlar flowers


MFO

text: VRIJE UNIVERSITEIT BRUSSEL

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: MFO

text: surface of open medlar flowers

text: Argentina

text: Tucum�n province

text: metagenome

text: metagenome

text: open medlar flowers

characteristic: title


PFA

text: VRIJE UNIVERSITEIT BRUSSEL

text: public

characteristic: SRA accession

text: PFA

text: fruit surface of almost ripe passion fruits

text: Argentina

text: Tucum�n province

text: metagenome

text: metagenome

text: almost ripe passion fruits


PFR

text: VRIJE UNIVERSITEIT BRUSSEL

text: public

text: PFR

characteristic: Submitter Id

text: fruit surface of ripe passion fruits

text: Argentina

text: Tucum�n province

text: metagenome

text: metagenome

text: ripe passion fruits


PAU

text: VRIJE UNIVERSITEIT BRUSSEL

text: public

text: PAU

text: fruit surface of unripe papaya fruits

text: Argentina

text: Tucum�n province

text: metagenome

text: metagenome

text: unripe papaya fruits


PAA

text: VRIJE UNIVERSITEIT BRUSSEL

text: public

text: PAA

text: fruit surface of almost ripe papaya fruits

text: Argentina

text: Tucum�n province

text: metagenome

text: metagenome

text: almost ripe papaya fruits


text: VRIJE UNIVERSITEIT BRUSSEL

text: public

text: fruit surface of ripe papaya fruits

text: Argentina

text: Tucum�n province

text: metagenome

text: metagenome

text: ripe papaya fruits


text: public

tag: Namespace:INRES Molecular Biology of the Rhizosphere

text: low

characteristic: carbon level

characteristic: collection date

text: rhizosphere

characteristic: compartment

text: 16S amplicons

text: sandy soil

characteristic: environment (biome)

text: maize rhizosphere

characteristic: environment (feature)

text: climate chamber

characteristic: environment (material)

text: Germany

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: investigation type

text: uncultured prokaryote

characteristic: project name

text: base

characteristic: root section

text: primary

characteristic: root type

characteristic: sample name

text: uncultured prokaryote

text: Illumina HiSeq

characteristic: sequencing method

text: soil

characteristic: soil environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRES Molecular Biology of the Rhizosphere

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: medium

characteristic: carbon level

text: rhizosphere

text: 16S amplicons

characteristic: description

text: sandy soil

text: maize rhizosphere

text: climate chamber

text: Germany

characteristic: geographic location (country and/or sea)

text: uncultured prokaryote

characteristic: organism

text: tip

text: primary

text: uncultured prokaryote

text: Illumina HiSeq

text: soil

characteristic: title


text: public

text: low

characteristic: collection date

text: rhizosphere

characteristic: compartment

text: 16S amplicons

text: sandy soil

characteristic: environment (biome)

text: maize rhizosphere

characteristic: environment (feature)

text: climate chamber

characteristic: environment (material)

text: Germany

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: investigation type

text: uncultured prokaryote

characteristic: project name

text: base

characteristic: root section

text: seminal

characteristic: root type

characteristic: sample name

text: uncultured prokaryote

text: Illumina HiSeq

characteristic: sequencing method

text: soil


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: medium

characteristic: carbon level

text: rhizosphere

text: 16S amplicons

characteristic: description

text: sandy soil

text: maize rhizosphere

text: climate chamber

text: Germany

characteristic: geographic location (country and/or sea)

text: uncultured prokaryote

characteristic: organism

text: tip

text: seminal

text: uncultured prokaryote

text: Illumina HiSeq

text: soil

characteristic: soil environmental package


text: public

text: low

characteristic: collection date

text: rhizosphere

characteristic: compartment

text: 16S amplicons

text: sandy soil

characteristic: environment (biome)

text: maize rhizosphere

characteristic: environment (feature)

text: climate chamber

characteristic: environment (material)

text: Germany

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: investigation type

text: uncultured prokaryote

characteristic: project name

text: base

characteristic: root section

text: crown 3

characteristic: root type

characteristic: sample name

text: uncultured prokaryote

text: Illumina HiSeq

text: soil

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: medium

characteristic: carbon level

text: rhizosphere

text: 16S amplicons

characteristic: description

text: sandy soil

text: maize rhizosphere

text: climate chamber

text: Germany

characteristic: geographic location (country and/or sea)

text: uncultured prokaryote

characteristic: organism

text: tip

text: crown 3

text: uncultured prokaryote

text: Illumina HiSeq

characteristic: sequencing method

text: soil


text: public

text: low

characteristic: collection date

text: rhizosphere

characteristic: compartment

text: 16S amplicons

text: sandy soil

characteristic: environment (biome)

text: maize rhizosphere

characteristic: environment (feature)

text: climate chamber

characteristic: environment (material)

text: Germany

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: investigation type

text: uncultured prokaryote

characteristic: project name

text: base

characteristic: root section

text: crown 2

characteristic: root type

characteristic: sample name

text: uncultured prokaryote

text: Illumina HiSeq

text: soil

characteristic: soil environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: medium

characteristic: carbon level

text: rhizosphere

text: 16S amplicons

characteristic: description

text: sandy soil

text: maize rhizosphere

text: climate chamber

text: Germany

characteristic: geographic location (country and/or sea)

text: uncultured prokaryote

characteristic: organism

text: tip

text: crown 2

text: uncultured prokaryote

text: Illumina HiSeq

text: soil

characteristic: title


text: public

text: low

characteristic: collection date

text: rhizosphere

characteristic: compartment

text: 16S amplicons

text: sandy soil

characteristic: environment (biome)

text: maize rhizosphere

characteristic: environment (feature)

text: climate chamber

characteristic: environment (material)

text: Germany

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: investigation type

text: uncultured prokaryote

characteristic: project name

text: base

characteristic: root section

text: crown 1

characteristic: root type

characteristic: sample name

text: uncultured prokaryote

text: Illumina HiSeq

characteristic: sequencing method

text: soil


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: medium

characteristic: carbon level

text: rhizosphere

text: 16S amplicons

characteristic: description

text: sandy soil

text: maize rhizosphere

text: climate chamber

text: Germany

characteristic: geographic location (country and/or sea)

text: uncultured prokaryote

characteristic: organism

text: tip

text: crown 1

text: uncultured prokaryote

text: Illumina HiSeq

text: soil

characteristic: soil environmental package


text: public

text: high

characteristic: collection date

text: rhizosphere

characteristic: compartment

text: 16S amplicons

text: sandy soil

characteristic: environment (biome)

text: maize rhizosphere

characteristic: environment (feature)

text: climate chamber

characteristic: environment (material)

text: Germany

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: investigation type

text: uncultured prokaryote

characteristic: project name

text: tip

characteristic: root section

text: crown 3

characteristic: root type

characteristic: sample name

text: uncultured prokaryote

text: Illumina HiSeq

text: soil

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: bulk

characteristic: carbon level

text: bulk soil

text: 16S amplicons

characteristic: description

text: sandy soil

text: maize rhizosphere

text: climate chamber

text: Germany

characteristic: geographic location (country and/or sea)

text: uncultured prokaryote

characteristic: organism

text: bulk

text: bulk

text: P1 B

text: uncultured prokaryote

text: Illumina HiSeq

characteristic: sequencing method

text: soil


text: public

text: low

characteristic: collection date

text: rhizosphere

characteristic: compartment

text: 16S amplicons

text: sandy soil

characteristic: environment (biome)

text: maize rhizosphere

characteristic: environment (feature)

text: climate chamber

characteristic: environment (material)

text: Germany

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: investigation type

text: uncultured prokaryote

characteristic: project name

text: base

characteristic: root section

text: primary

characteristic: root type

characteristic: sample name

text: uncultured prokaryote

text: Illumina HiSeq

text: soil

characteristic: soil environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: high

characteristic: carbon level

text: rhizosphere

text: 16S amplicons

characteristic: description

text: sandy soil

text: maize rhizosphere

text: climate chamber

text: Germany

characteristic: geographic location (country and/or sea)

text: uncultured prokaryote

characteristic: organism

text: tip

text: crown 4

text: uncultured prokaryote

text: Illumina HiSeq

text: soil

characteristic: title


text: public

text: bulk

characteristic: collection date

text: bulk soil

characteristic: compartment

text: 16S amplicons

text: sandy soil

characteristic: environment (biome)

text: maize rhizosphere

characteristic: environment (feature)

text: climate chamber

characteristic: environment (material)

text: Germany

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: investigation type

text: uncultured prokaryote

characteristic: project name

text: bulk

characteristic: root section

text: bulk

characteristic: root type

text: P2 B

characteristic: sample name

text: uncultured prokaryote

text: Illumina HiSeq

characteristic: sequencing method

text: soil


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: bulk

characteristic: carbon level

text: bulk soil

text: 16S amplicons

characteristic: description

text: sandy soil

text: maize rhizosphere

text: climate chamber

text: Germany

characteristic: geographic location (country and/or sea)

text: uncultured prokaryote

characteristic: organism

text: bulk

text: bulk

text: P3 B

text: uncultured prokaryote

text: Illumina HiSeq

text: soil

characteristic: soil environmental package


text: public

text: low

characteristic: collection date

text: rhizosphere

characteristic: compartment

text: ITS amplicons

text: sandy soil

characteristic: environment (biome)

text: maize rhizosphere

characteristic: environment (feature)

text: climate chamber

characteristic: environment (material)

text: Germany

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: uncultured fungus

characteristic: project name

text: base

characteristic: root section

text: primary

characteristic: root type

characteristic: sample name

text: uncultured fungus

text: Illumina MiSeq

text: soil

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: medium

characteristic: carbon level

text: rhizosphere

text: ITS amplicons

characteristic: description

text: sandy soil

text: maize rhizosphere

text: climate chamber

text: Germany

characteristic: geographic location (country and/or sea)

text: eukaryote

text: uncultured fungus

characteristic: organism

text: tip

text: primary

text: uncultured fungus

text: Illumina MiSeq

characteristic: sequencing method

text: soil


text: public

text: low

characteristic: collection date

text: rhizosphere

characteristic: compartment

text: ITS amplicons

text: sandy soil

characteristic: environment (biome)

text: maize rhizosphere

characteristic: environment (feature)

text: climate chamber

characteristic: environment (material)

text: Germany

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: uncultured fungus

characteristic: project name

text: base

characteristic: root section

text: seminal

characteristic: root type

characteristic: sample name

text: uncultured fungus

text: Illumina MiSeq

text: soil

characteristic: soil environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: medium

characteristic: carbon level

text: rhizosphere

text: ITS amplicons

characteristic: description

text: sandy soil

text: maize rhizosphere

text: climate chamber

text: Germany

characteristic: geographic location (country and/or sea)

text: eukaryote

text: uncultured fungus

characteristic: organism

text: tip

text: seminal

text: uncultured fungus

text: Illumina MiSeq

text: soil

characteristic: title


text: public

text: low

characteristic: collection date

text: rhizosphere

characteristic: compartment

text: ITS amplicons

text: sandy soil

characteristic: environment (biome)

text: maize rhizosphere

characteristic: environment (feature)

text: climate chamber

characteristic: environment (material)

text: Germany

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: uncultured fungus

characteristic: project name

text: base

characteristic: root section

text: crown 3

characteristic: root type

characteristic: sample name

text: uncultured fungus

text: Illumina MiSeq

characteristic: sequencing method

text: soil


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: medium

characteristic: carbon level

text: rhizosphere

text: ITS amplicons

characteristic: description

text: sandy soil

text: maize rhizosphere

text: climate chamber

text: Germany

characteristic: geographic location (country and/or sea)

text: eukaryote

text: uncultured fungus

characteristic: organism

text: tip

text: crown 3

text: uncultured fungus

text: Illumina MiSeq

text: soil

characteristic: soil environmental package


text: public

text: medium

characteristic: collection date

text: rhizosphere

characteristic: compartment

text: ITS amplicons

text: sandy soil

characteristic: environment (biome)

text: maize rhizosphere

characteristic: environment (feature)

text: climate chamber

characteristic: environment (material)

text: Germany

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: uncultured fungus

characteristic: project name

text: tip

characteristic: root section

text: crown 2

characteristic: root type

characteristic: sample name

text: uncultured fungus

text: Illumina MiSeq

text: soil

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: low

characteristic: carbon level

text: rhizosphere

text: ITS amplicons

characteristic: description

text: sandy soil

text: maize rhizosphere

text: climate chamber

text: Germany

characteristic: geographic location (country and/or sea)

text: eukaryote

text: uncultured fungus

characteristic: organism

text: base

text: crown 1

text: uncultured fungus

text: Illumina MiSeq

characteristic: sequencing method

text: soil


text: public

text: medium

characteristic: collection date

text: rhizosphere

characteristic: compartment

text: ITS amplicons

text: sandy soil

characteristic: environment (biome)

text: maize rhizosphere

characteristic: environment (feature)

text: climate chamber

characteristic: environment (material)

text: Germany

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: uncultured fungus

characteristic: project name

text: tip

characteristic: root section

text: crown 1

characteristic: root type

characteristic: sample name

text: uncultured fungus

text: Illumina MiSeq

text: soil

characteristic: soil environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: low

characteristic: carbon level

text: rhizosphere

text: ITS amplicons

characteristic: description

text: sandy soil

text: maize rhizosphere

text: climate chamber

text: Germany

characteristic: geographic location (country and/or sea)

text: eukaryote

text: uncultured fungus

characteristic: organism

text: base

text: crown 2

text: uncultured fungus

text: Illumina MiSeq

text: soil

characteristic: title


text: public

text: high

characteristic: collection date

text: rhizosphere

characteristic: compartment

text: ITS amplicons

text: sandy soil

characteristic: environment (biome)

text: maize rhizosphere

characteristic: environment (feature)

text: climate chamber

characteristic: environment (material)

text: Germany

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: uncultured fungus

characteristic: project name

text: tip

characteristic: root section

text: crown 3

characteristic: root type

characteristic: sample name

text: uncultured fungus

text: Illumina MiSeq

characteristic: sequencing method

text: soil


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: bulk

characteristic: carbon level

text: bulk soil

text: ITS amplicons

characteristic: description

text: sandy soil

text: maize rhizosphere

text: climate chamber

text: Germany

characteristic: geographic location (country and/or sea)

text: eukaryote

text: uncultured fungus

characteristic: organism

text: bulk

text: bulk

text: P1 B

text: uncultured fungus

text: Illumina MiSeq

text: soil

characteristic: soil environmental package


text: public

text: high

characteristic: collection date

text: rhizosphere

characteristic: compartment

text: ITS amplicons

text: sandy soil

characteristic: environment (biome)

text: maize rhizosphere

characteristic: environment (feature)

text: climate chamber

characteristic: environment (material)

text: Germany

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: uncultured fungus

characteristic: project name

text: tip

characteristic: root section

text: crown 4

characteristic: root type

characteristic: sample name

text: uncultured fungus

text: Illumina MiSeq

text: soil

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: bulk

characteristic: carbon level

text: bulk soil

text: ITS amplicons

characteristic: description

text: sandy soil

text: maize rhizosphere

text: climate chamber

text: Germany

characteristic: geographic location (country and/or sea)

text: eukaryote

text: uncultured fungus

characteristic: organism

text: bulk

text: bulk

text: P2 B

text: uncultured fungus

text: Illumina MiSeq

characteristic: sequencing method

text: soil


text: public

text: bulk

characteristic: collection date

text: bulk soil

characteristic: compartment

text: ITS amplicons

text: sandy soil

characteristic: environment (biome)

text: maize rhizosphere

characteristic: environment (feature)

text: climate chamber

characteristic: environment (material)

text: Germany

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: uncultured fungus

characteristic: project name

text: bulk

characteristic: root section

text: bulk

characteristic: root type

text: P3 B

characteristic: sample name

text: uncultured fungus

text: Illumina MiSeq

text: soil

characteristic: soil environmental package


E-MTAB-11344:H8N8 CAF 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11344:H8N8 CAF 1

tag: Namespace:Department of Gynecology and Obstetrics Molecular Gynecology Laboratory

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: breast invasive ductal carcinoma cell

text: house mouse

characteristic: common name

text: Protocols: H8N8 cells were treated with CAF (312,5 ng/ml cyclophosphamide, 15,6 ng/ml doxorubicin and 312,5 ng/ml 5-FU) in 10 cm plates for 48 hours in biological triplicates. Total RNA was extracted from G-2 cells with Qiazol (Qiagen) following the manufacturer's recommendations. mRNA sequencing libraries were generated with the NEXTflex™ Rapid Illumina Directional Kit according to the manufacturer’s instructions. The size of the generated libraries was estimated on High Sensitivity DNA chip (Agilent) using a Bioanalyser 2100 (Agilent).

characteristic: description

text: breast cancer

characteristic: disease

text: WAP-T-NP8; WAP-mutp53R270H

characteristic: genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: breast

characteristic: organism part

characteristic: replicate

text: Mus musculus

text: CAF (312,5 ng/ml cyclophosphamide, 15,6 ng/ml doxorubicin and 312,5 ng/ml 5-Fluorouracil)

characteristic: stimulus

text: BALB/c

characteristic: strain

text: H8N8 CAF 1

characteristic: title


E-MTAB-11344:H8N8 CAF 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Department of Gynecology and Obstetrics Molecular Gynecology Laboratory

characteristic: INSDC center name

text: public

text: E-MTAB-11344:H8N8 CAF 2

text: ArrayExpress

text: breast invasive ductal carcinoma cell

text: house mouse

text: breast cancer

text: WAP-T-NP8; WAP-mutp53R270H

text: Mus musculus

text: Mus musculus

text: breast

text: Mus musculus

text: BALB/c

text: H8N8 CAF 2


E-MTAB-11344:H8N8 CAF 3

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11344:H8N8 CAF 3

characteristic: Submitter Id

text: ArrayExpress

text: breast invasive ductal carcinoma cell

text: house mouse

text: breast cancer

text: WAP-T-NP8; WAP-mutp53R270H

text: Mus musculus

text: Mus musculus

text: breast

text: Mus musculus

text: BALB/c

text: H8N8 CAF 3


E-MTAB-11344:H8N8 Vehicle 1

text: public

text: E-MTAB-11344:H8N8 Vehicle 1

text: ArrayExpress

characteristic: broker name

text: breast invasive ductal carcinoma cell

text: house mouse

characteristic: common name

characteristic: description

text: breast cancer

characteristic: disease

text: WAP-T-NP8; WAP-mutp53R270H

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: breast

text: Mus musculus

text: vehicle

text: BALB/c

text: H8N8 Vehicle 1


E-MTAB-11344:H8N8 Vehicle 2

text: public

text: E-MTAB-11344:H8N8 Vehicle 2

text: ArrayExpress

text: breast invasive ductal carcinoma cell

text: house mouse

text: breast cancer

text: WAP-T-NP8; WAP-mutp53R270H

text: Mus musculus

characteristic: organism

text: Mus musculus

text: breast

characteristic: organism part

characteristic: replicate

text: Mus musculus

text: vehicle

characteristic: stimulus

text: BALB/c

characteristic: strain

text: H8N8 Vehicle 2


E-MTAB-11344:H8N8 Vehicle 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11344:H8N8 Vehicle 3

text: ArrayExpress

text: breast invasive ductal carcinoma cell

text: house mouse

text: breast cancer

text: WAP-T-NP8; WAP-mutp53R270H

text: Mus musculus

text: Mus musculus

text: breast

text: Mus musculus

text: vehicle

text: BALB/c

text: H8N8 Vehicle 3

characteristic: title


text: UMR 1137 IAME

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UMR 1137 IAME

text: Niger

characteristic: geographic location (country and/or sea)

text: healthy

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: faeces

characteristic: isolate

text: MSF-NIGER

text: Escherichia coli

text: Escherichia coli


text: University Hospital Bonn

text: public

tag: Namespace:University Hospital Bonn

characteristic: Submitter Id

characteristic: description

text: metagenome

characteristic: organism

text: metagenome

text: microbiome of biofilm replicate 1


characteristic: ENA-CHECKLIST

text: University Hospital Bonn

text: public

text: metagenome

text: metagenome

text: microbiome of biofilm replicate 2


characteristic: ENA-FIRST-PUBLIC

text: University Hospital Bonn

text: public

text: metagenome

text: metagenome

text: microbiome of biofilm replicate 3


characteristic: ENA-LAST-UPDATE

text: RUDJER BOSCOVIC INSTITUTE

text: public

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:821-169665

tag: Namespace:RUDJER BOSCOVIC INSTITUTE

characteristic: collection date

text: 18S-V9 DNA metabarcoding of eukaryotic community structure in lake samples - epilimnion

text: Freshwater lake biom

characteristic: environment (biome)

text: Freshwater lake

characteristic: environment (feature)

text: water sample

characteristic: environment (material)

text: Croatia

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: lake water metagenome

text: DNKVODA

characteristic: project name

text: lake water metagenome

text: Illumina NextSeq 500

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: External Id

text: RUDJER BOSCOVIC INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:822-169666

characteristic: Submitter Id

text: Freshwater lake biom

text: Freshwater lake

text: water sample

text: Croatia

characteristic: geographic location (country and/or sea)

text: eukaryote

text: lake water metagenome

text: DNKVODA

text: lake water metagenome

text: Illumina NextSeq 500

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: RUDJER BOSCOVIC INSTITUTE

text: public

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:822-169668

characteristic: collection date

characteristic: description

text: Freshwater lake biom

characteristic: environment (biome)

text: Freshwater lake

characteristic: environment (feature)

text: water sample

characteristic: environment (material)

text: Croatia

text: eukaryote

text: lake water metagenome

characteristic: organism

text: DNKVODA

text: lake water metagenome

text: Illumina NextSeq 500

text: water


characteristic: External Id

text: RUDJER BOSCOVIC INSTITUTE

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:822-169669

text: Freshwater lake biom

text: Freshwater lake

text: water sample

text: Croatia

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: lake water metagenome

text: DNKVODA

characteristic: project name

text: lake water metagenome

text: Illumina NextSeq 500

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: RUDJER BOSCOVIC INSTITUTE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:822-169670

characteristic: Submitter Id

text: Freshwater lake biom

text: Freshwater lake

text: water sample

text: Croatia

characteristic: geographic location (country and/or sea)

text: eukaryote

text: lake water metagenome

text: DNKVODA

text: lake water metagenome

text: Illumina NextSeq 500

characteristic: title

text: water


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RUDJER BOSCOVIC INSTITUTE

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:822-169671

characteristic: collection date

characteristic: description

text: Freshwater lake biom

characteristic: environment (biome)

text: Freshwater lake

characteristic: environment (feature)

text: water sample

characteristic: environment (material)

text: Croatia

text: eukaryote

text: lake water metagenome

characteristic: organism

text: DNKVODA

text: lake water metagenome

text: Illumina NextSeq 500

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: RUDJER BOSCOVIC INSTITUTE

text: public

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:822-169672

text: Freshwater lake biom

text: Freshwater lake

text: water sample

text: Croatia

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: lake water metagenome

text: DNKVODA

characteristic: project name

text: lake water metagenome

text: Illumina NextSeq 500

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RUDJER BOSCOVIC INSTITUTE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:822-169673

characteristic: Submitter Id

text: Freshwater lake biom

text: Freshwater lake

text: water sample

text: Croatia

characteristic: geographic location (country and/or sea)

text: eukaryote

text: lake water metagenome

text: DNKVODA

text: lake water metagenome

text: Illumina NextSeq 500

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: RUDJER BOSCOVIC INSTITUTE

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:822-169674

characteristic: collection date

characteristic: description

text: Freshwater lake biom

characteristic: environment (biome)

text: Freshwater lake

characteristic: environment (feature)

text: water sample

characteristic: environment (material)

text: Croatia

text: eukaryote

text: lake water metagenome

characteristic: organism

text: DNKVODA

text: lake water metagenome

text: Illumina NextSeq 500

text: water


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RUDJER BOSCOVIC INSTITUTE

text: public

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:822-169675

text: Freshwater lake biom

text: Freshwater lake

text: water sample

text: Croatia

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: lake water metagenome

text: DNKVODA

characteristic: project name

text: lake water metagenome

text: Illumina NextSeq 500

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: RUDJER BOSCOVIC INSTITUTE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:823-169676

characteristic: Submitter Id

text: Freshwater lake biom

text: Freshwater lake

text: water sample

text: Croatia

characteristic: geographic location (country and/or sea)

text: eukaryote

text: lake water metagenome

text: DNKVODA

text: lake water metagenome

text: Illumina NextSeq 500

characteristic: title

text: water


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RUDJER BOSCOVIC INSTITUTE

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:823-169677

characteristic: collection date

characteristic: description

text: Freshwater lake biom

characteristic: environment (biome)

text: Freshwater lake

characteristic: environment (feature)

text: water sample

characteristic: environment (material)

text: Croatia

text: eukaryote

text: lake water metagenome

characteristic: organism

text: DNKVODA

text: lake water metagenome

text: Illumina NextSeq 500

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: RUDJER BOSCOVIC INSTITUTE

text: public

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:823-169678

text: Freshwater lake biom

text: Freshwater lake

text: water sample

text: Croatia

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: lake water metagenome

text: DNKVODA

characteristic: project name

text: lake water metagenome

text: Illumina NextSeq 500

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RUDJER BOSCOVIC INSTITUTE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:823-169679

characteristic: Submitter Id

text: Freshwater lake biom

text: Freshwater lake

text: water sample

text: Croatia

characteristic: geographic location (country and/or sea)

text: eukaryote

text: lake water metagenome

text: DNKVODA

text: lake water metagenome

text: Illumina NextSeq 500

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: RUDJER BOSCOVIC INSTITUTE

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:823-169680

characteristic: collection date

characteristic: description

text: Freshwater lake biom

characteristic: environment (biome)

text: Freshwater lake

characteristic: environment (feature)

text: water sample

characteristic: environment (material)

text: Croatia

text: eukaryote

text: lake water metagenome

characteristic: organism

text: DNKVODA

text: lake water metagenome

text: Illumina NextSeq 500

text: water


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RUDJER BOSCOVIC INSTITUTE

text: public

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:823-169681

text: Freshwater lake biom

text: Freshwater lake

text: water sample

text: Croatia

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: lake water metagenome

text: DNKVODA

characteristic: project name

text: lake water metagenome

text: Illumina NextSeq 500

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: RUDJER BOSCOVIC INSTITUTE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:823-169682

characteristic: Submitter Id

text: Freshwater lake biom

text: Freshwater lake

text: water sample

text: Croatia

characteristic: geographic location (country and/or sea)

text: eukaryote

text: lake water metagenome

text: DNKVODA

text: lake water metagenome

text: Illumina NextSeq 500

characteristic: title

text: water


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RUDJER BOSCOVIC INSTITUTE

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:823-169683

characteristic: collection date

text: 18S-V9 DNA metabarcoding of eukaryotic community structure in lake samples - epilimnion

characteristic: description

text: Freshwater lake biom

characteristic: environment (biome)

text: Freshwater lake

characteristic: environment (feature)

text: water sample

characteristic: environment (material)

text: Croatia

text: eukaryote

text: lake water metagenome

characteristic: organism

text: DNKVODA

text: lake water metagenome

text: Illumina NextSeq 500

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: RUDJER BOSCOVIC INSTITUTE

text: public

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:823-169684

text: Freshwater lake biom

text: Freshwater lake

text: water sample

text: Croatia

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: lake water metagenome

text: DNKVODA

characteristic: project name

text: lake water metagenome

text: Illumina NextSeq 500

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RUDJER BOSCOVIC INSTITUTE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:823-169685

characteristic: Submitter Id

text: Freshwater lake biom

text: Freshwater lake

text: water sample

text: Croatia

characteristic: geographic location (country and/or sea)

text: eukaryote

text: lake water metagenome

text: DNKVODA

text: lake water metagenome

text: Illumina NextSeq 500

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: RUDJER BOSCOVIC INSTITUTE

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:823-169686

characteristic: collection date

characteristic: description

text: Freshwater lake biom

characteristic: environment (biome)

text: Freshwater lake

characteristic: environment (feature)

text: water sample

characteristic: environment (material)

text: Croatia

text: eukaryote

text: lake water metagenome

characteristic: organism

text: DNKVODA

text: lake water metagenome

text: Illumina NextSeq 500

text: water


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RUDJER BOSCOVIC INSTITUTE

text: public

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:823-169687

text: Freshwater lake biom

text: Freshwater lake

text: water sample

text: Croatia

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: lake water metagenome

text: DNKVODA

characteristic: project name

text: lake water metagenome

text: Illumina NextSeq 500

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: RUDJER BOSCOVIC INSTITUTE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:824-169688

characteristic: Submitter Id

text: Freshwater lake biom

text: Freshwater lake

text: water sample

text: Croatia

characteristic: geographic location (country and/or sea)

text: eukaryote

text: lake water metagenome

text: DNKVODA

text: lake water metagenome

text: Illumina NextSeq 500

characteristic: title

text: water


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RUDJER BOSCOVIC INSTITUTE

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:824-169689

characteristic: collection date

characteristic: description

text: Freshwater lake biom

characteristic: environment (biome)

text: Freshwater lake

characteristic: environment (feature)

text: water sample

characteristic: environment (material)

text: Croatia

text: eukaryote

text: lake water metagenome

characteristic: organism

text: DNKVODA

text: lake water metagenome

text: Illumina NextSeq 500

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: RUDJER BOSCOVIC INSTITUTE

text: public

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:824-169690

text: Freshwater lake biom

text: Freshwater lake

text: water sample

text: Croatia

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: lake water metagenome

text: DNKVODA

characteristic: project name

text: lake water metagenome

text: Illumina NextSeq 500

characteristic: sequencing method

text: water

characteristic: water environmental package


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: RUDJER BOSCOVIC INSTITUTE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-03-02-2022-13:57:27:824-169691

characteristic: Submitter Id

text: Freshwater lake biom

text: Freshwater lake

text: water sample

text: Croatia

characteristic: geographic location (country and/or sea)

text: eukaryote

text: lake water metagenome

text: DNKVODA

text: lake water metagenome

text: Illumina NextSeq 500

characteristic: title

text: water