E-MTAB-11190:Sample 193

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-11190:Sample 193

characteristic: Submitter Id

text: ArrayExpress

text: FACS sorting

text: monocyte

text: hematopoietic stem cell transplantation

text: human

text: female

characteristic: immunophenotype

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: 2nd follow up after transplantation

text: Homo sapiens

text: female

text: Sample 193


E-MTAB-11190:Sample 195

status: PUBLIC

tag: attribute

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11190:Sample 195

tag: Namespace:San Raffaele Telethon Institute for Gene Therapy (SR-Tiget), IRCCS San Raffaele Scientific Institute

unit: year

characteristic: age

text: ArrayExpress

characteristic: broker name

text: FACS sorting

characteristic: cell isolation strategy

text: bone marrow cell

text: hematopoietic stem cell transplantation

characteristic: clinical history

text: human

characteristic: common name

text: Protocols: Peripheral blood (PB) and bone marrow (BM) samples were harvested in EDTA containing tubes and stored at room temperature. Samples were processed within 2h from collection. Mononuclear cells and granulocytes were separated by density centrifugation over a Lymphoprep (Stemcell Technologies) gradient. Granulocyte enriched fraction was further purified over a Hetasep gradient. Normal density neutrophils (NDNs) were isolated from total granulocytes by magnetic bead sorting using Neutrophil Isolation kit (StemCell Technologies). Monocytes and low density neutrophils (LDNs) were isolated by magnetic bead sorting (CD14 Microbeads or CD15 Microbeads Miltenyi, respectively) or by fluorescence activated cell sorting (FACS). We sorted monocytes as CD3-CD56-CD19-CD34-(Lin-)CD33+CD15-CD14+ cells and LDN as (Lin-)CD33+CD14-CD15+CD193- cells. BM neutrophil developmental intermediates were isolated by FACS sorting and identified as (Lin-)CD14-CD33+CD15+CD193- cells and further fractionated into: BM1 CD11b-CD16- cells, BM2 CD11b+CD16- cells, BM3 CD11b+CD16int, and BM 4 CD11b+CD16hiCD10+ cells. Cells were sorted at MoFlo XDP (Beckman Coulter) or FACSAria Fusion (Beckton Dickinson) cell sorters. We extracted total RNA using the ReliaPrep RNA Cell Miniprep System (Promega). We quantified RNA concentration using Qubit RNA HS Assay Kit using Qubit 3.0 and we evaluated RNA integrity with Agilent RNA 6000 Pico Kit using Bionalyzer (Agilent). RNA-Seq libraries were generated using the Smart-seq2 method (Picelli et al., 2014) starting from 0.5 ng of RNA. Retro-transcription was performed using SuperScript II Reverse Transcriptase, cDNA was PCR-amplified (18 cycles) with KAPA HiFi HotStart and purified with AMPure XP beads. After purification, we determined cDNA concentration using Qubit dsDNA HS Assay Kit at Qubit 3.0 and we assessed size distribution at Agilent 4200 TapeStation system. We performed the tagmentation reaction starting from 0.5 ng of cDNA for 30 minutes at 55°C and we performed enrichment PCR using 12 cycles. Libraries were purified with AMPure XP beads, quantified using Qubit 3.0, assessed for fragment size distribution on an Agilent 4200 TapeStation system.

characteristic: description

characteristic: donor age (ref. to HSCT)

text: female

characteristic: donor sex (ref. to HSCT)

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: bone marrow

text: 2nd follow up after transplantation

characteristic: sampling time point

text: Homo sapiens

text: female

characteristic: sex

text: Sample 195

characteristic: title


E-MTAB-11190:Sample 194

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: San Raffaele Telethon Institute for Gene Therapy (SR-Tiget), IRCCS San Raffaele Scientific Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-11190:Sample 194

characteristic: Submitter Id

text: ArrayExpress

text: FACS sorting

text: bone marrow cell

text: hematopoietic stem cell transplantation

text: human

text: female

characteristic: immunophenotype

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: organism part

text: 2nd follow up after transplantation

text: Homo sapiens

text: female

text: Sample 194


E-MTAB-11190:Sample 201

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11190:Sample 201

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Neutrophil Isolation kit

characteristic: cell isolation strategy

text: normal density neutrophil

text: hematopoietic stem cell transplantation

characteristic: clinical history

text: human

characteristic: common name

text: female

text: Homo sapiens

text: Homo sapiens

text: blood

text: 2nd follow up after transplantation

text: Homo sapiens

text: male

text: Sample 201


E-MTAB-11190:Sample 203

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11190:Sample 203

text: ArrayExpress

text: FACS sorting

text: bone marrow cell

text: hematopoietic stem cell transplantation

text: human

characteristic: description

characteristic: donor age (ref. to HSCT)

text: female

characteristic: donor sex (ref. to HSCT)

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: bone marrow

text: 2nd follow up after transplantation

characteristic: sampling time point

text: Homo sapiens

text: male

characteristic: sex

text: Sample 203

characteristic: title


E-MTAB-11190:Sample 204

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-11190:Sample 204

characteristic: Submitter Id

text: ArrayExpress

text: FACS sorting

text: bone marrow cell

text: hematopoietic stem cell transplantation

text: human

text: female

characteristic: immunophenotype

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: organism part

text: 2nd follow up after transplantation

text: Homo sapiens

text: male

text: Sample 204


E-MTAB-11190:Sample 202

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11190:Sample 202

characteristic: age

text: ArrayExpress

characteristic: broker name

text: FACS sorting

characteristic: cell isolation strategy

text: monocyte

text: hematopoietic stem cell transplantation

characteristic: clinical history

text: human

characteristic: common name

text: female

text: CD3-CD56-CD19-CD34-(Lin-)CD33+CD15-CD14+

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: 2nd follow up after transplantation

text: Homo sapiens

text: male

text: Sample 202


E-MTAB-11190:Sample 145

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11190:Sample 145

text: ArrayExpress

text: FACS sorting

text: monocyte

text: hematopoietic stem cell transplantation

text: human

characteristic: description

characteristic: donor age (ref. to HSCT)

text: female

characteristic: donor sex (ref. to HSCT)

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: 1st follow up after transplantation

characteristic: sampling time point

text: Homo sapiens

text: female

characteristic: sex

text: Sample 145

characteristic: title


E-MTAB-11190:Sample 104

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-11190:Sample 104

characteristic: Submitter Id

text: ArrayExpress

text: CD15 Microbeads

text: low density neutrophil

text: metastatic pancreatic ductal adenocarcinoma

text: human

characteristic: immunophenotype

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: female

text: Sample 104


E-MTAB-11190:Sample 103

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11190:Sample 103

characteristic: age

text: ArrayExpress

characteristic: broker name

text: CD14 Microbeads

characteristic: cell isolation strategy

text: monocyte

characteristic: clinical history

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 103


E-MTAB-11190:Sample 105

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11190:Sample 105

text: ArrayExpress

text: Neutrophil Isolation kit

text: normal density neutrophil

text: human

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

characteristic: sex

text: Sample 105

characteristic: title


E-MTAB-11190:Sample 130

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-11190:Sample 130

characteristic: Submitter Id

text: ArrayExpress

text: FACS sorting

text: low density neutrophil

text: G-CSF

text: human

characteristic: immunophenotype

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 130


E-MTAB-11190:Sample 158

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11190:Sample 158

characteristic: age

text: ArrayExpress

text: FACS sorting

text: monocyte

text: G-CSF

text: human

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: Sample 158


E-MTAB-11190:Sample 55

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11190:Sample 55

text: ArrayExpress

characteristic: broker name

text: Neutrophil Isolation kit

characteristic: cell isolation strategy

text: normal density neutrophil

text: G-CSF

characteristic: clinical history

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 55


E-MTAB-11190:Sample 168

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11190:Sample 168

text: ArrayExpress

text: FACS sorting

text: monocyte

text: steady state

text: human

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: Sample 168

characteristic: title


E-MTAB-11190:Sample 70

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

text: E-MTAB-11190:Sample 70

characteristic: Submitter Id

text: ArrayExpress

text: Neutrophil Isolation kit

text: normal density neutrophil

text: steady state

text: human

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 70


E-MTAB-11190:Sample 110

characteristic: ENA-CHECKLIST

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11190:Sample 110

characteristic: age

text: ArrayExpress

text: CD15 Microbeads

text: low density neutrophil

text: human

characteristic: immunophenotype

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: female

text: Sample 110


E-MTAB-11190:Sample 109

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

text: public

text: E-MTAB-11190:Sample 109

text: ArrayExpress

characteristic: broker name

text: CD14 Microbeads

characteristic: cell isolation strategy

text: monocyte

characteristic: clinical history

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 109


E-MTAB-11190:Sample 111

characteristic: ENA-LAST-UPDATE

characteristic: INSDC first public

text: public

text: E-MTAB-11190:Sample 111

text: ArrayExpress

text: Neutrophil Isolation kit

text: normal density neutrophil

text: human

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

characteristic: sex

text: Sample 111

characteristic: title


E-MTAB-11190:Sample 113

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11190:Sample 113

characteristic: Submitter Id

text: ArrayExpress

text: CD15 Microbeads

text: low density neutrophil

text: human

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 113


E-MTAB-11190:Sample 112

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-11190:Sample 112

characteristic: age

text: ArrayExpress

text: CD14 Microbeads

text: monocyte

text: human

characteristic: immunophenotype

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: female

text: Sample 112


E-MTAB-11190:Sample 114

characteristic: ENA-LAST-UPDATE

characteristic: INSDC first public

text: public

text: E-MTAB-11190:Sample 114

text: ArrayExpress

characteristic: broker name

text: Neutrophil Isolation kit

characteristic: cell isolation strategy

text: normal density neutrophil

characteristic: clinical history

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 114


E-MTAB-11190:Sample 118

characteristic: ENA-CHECKLIST

characteristic: External Id

text: public

text: E-MTAB-11190:Sample 118

text: ArrayExpress

text: CD15 Microbeads

text: low density neutrophil

text: human

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: Sample 118

characteristic: title


E-MTAB-11190:Sample 117

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11190:Sample 117

characteristic: Submitter Id

text: ArrayExpress

text: CD14 Microbeads

text: monocyte

text: human

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 117


E-MTAB-11190:Sample 119

characteristic: ENA-LAST-UPDATE

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-11190:Sample 119

characteristic: age

text: ArrayExpress

text: Neutrophil Isolation kit

text: normal density neutrophil

text: human

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: Sample 119


E-MTAB-11190:Sample 87

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-11190:Sample 87

text: ArrayExpress

characteristic: broker name

text: CD15 Microbeads

characteristic: cell isolation strategy

text: low density neutrophil

characteristic: clinical history

text: human

characteristic: common name

characteristic: immunophenotype

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 87


E-MTAB-11190:Sample 210

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: public

text: E-MTAB-11190:Sample 210

text: ArrayExpress

text: CD14 Microbeads

text: monocyte

text: human

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: Sample 210

characteristic: title


E-MTAB-11190:Sample 88

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11190:Sample 88

characteristic: Submitter Id

text: ArrayExpress

text: Neutrophil Isolation kit

text: normal density neutrophil

text: human

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 88


E-MTAB-11190:Sample 90

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-11190:Sample 90

characteristic: age

text: ArrayExpress

characteristic: broker name

text: CD15 Microbeads

text: low density neutrophil

text: human

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: female

text: Sample 90


E-MTAB-11190:Sample 89

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: public

text: E-MTAB-11190:Sample 89

text: ArrayExpress

text: CD14 Microbeads

characteristic: cell isolation strategy

text: monocyte

characteristic: clinical history

text: human

characteristic: common name

characteristic: immunophenotype

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 89


E-MTAB-11190:Sample 93

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

text: public

text: E-MTAB-11190:Sample 93

text: ArrayExpress

text: CD14 Microbeads

text: monocyte

text: human

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

characteristic: sex

text: Sample 93

characteristic: title


E-MTAB-11190:Sample 94

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11190:Sample 94

characteristic: Submitter Id

text: ArrayExpress

text: Neutrophil Isolation kit

text: normal density neutrophil

text: human

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 94


E-MTAB-11190:Sample 98

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-11190:Sample 98

characteristic: age

text: ArrayExpress

characteristic: broker name

text: FACS sorting

text: low density neutrophil

text: human

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: female

text: Sample 98


E-MTAB-11190:Sample 97

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

text: public

text: E-MTAB-11190:Sample 97

text: ArrayExpress

text: FACS sorting

characteristic: cell isolation strategy

text: monocyte

characteristic: clinical history

text: human

characteristic: common name

characteristic: immunophenotype

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 97


E-MTAB-11190:Sample 99

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

text: public

text: E-MTAB-11190:Sample 99

text: ArrayExpress

text: Neutrophil Isolation kit

text: normal density neutrophil

text: human

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

characteristic: sex

text: Sample 99

characteristic: title


E-MTAB-11190:Sample 101

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11190:Sample 101

characteristic: Submitter Id

text: ArrayExpress

text: FACS sorting

text: low density neutrophil

text: human

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 101


E-MTAB-11190:Sample 100

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-11190:Sample 100

characteristic: age

text: ArrayExpress

characteristic: broker name

text: FACS sorting

text: monocyte

text: human

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: female

text: Sample 100


E-MTAB-11190:Sample 102

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

text: public

text: E-MTAB-11190:Sample 102

text: ArrayExpress

text: Neutrophil Isolation kit

characteristic: cell isolation strategy

text: normal density neutrophil

characteristic: clinical history

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 102


E-MTAB-11190:Sample 107

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11190:Sample 107

text: ArrayExpress

text: FACS sorting

text: low density neutrophil

text: human

characteristic: description

characteristic: immunophenotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: Sample 107

characteristic: title


E-MTAB-11190:Sample 106

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11190:Sample 106

characteristic: Submitter Id

text: ArrayExpress

text: FACS sorting

text: monocyte

text: human

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 106


E-MTAB-11190:Sample 108

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-11190:Sample 108

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Neutrophil Isolation kit

text: normal density neutrophil

text: human

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: Sample 108


E-MTAB-11190:Sample 154

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

text: public

text: E-MTAB-11190:Sample 154

text: ArrayExpress

text: CD14 Microbeads

characteristic: cell isolation strategy

text: monocyte

characteristic: clinical history

text: human

characteristic: common name

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 154


E-MTAB-11190:Sample 45

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11190:Sample 45

text: ArrayExpress

text: Neutrophil Isolation kit

text: normal density neutrophil

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: Sample 45

characteristic: title


E-MTAB-11190:Sample 131

characteristic: ENA-CHECKLIST

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11190:Sample 131

characteristic: Submitter Id

text: ArrayExpress

text: FACS sorting

text: low density neutrophil

text: G-CSF

text: human

characteristic: immunophenotype

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 131


E-MTAB-11190:Sample 159

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-11190:Sample 159

characteristic: age

text: ArrayExpress

characteristic: broker name

text: FACS sorting

text: monocyte

text: G-CSF

text: human

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: Sample 159


E-MTAB-11190:Sample 56

characteristic: ENA-LAST-UPDATE

characteristic: INSDC first public

text: public

text: E-MTAB-11190:Sample 56

text: ArrayExpress

text: Neutrophil Isolation kit

characteristic: cell isolation strategy

text: normal density neutrophil

text: G-CSF

characteristic: clinical history

text: human

characteristic: common name

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 56


E-MTAB-11190:Sample 169

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC last update

text: public

text: E-MTAB-11190:Sample 169

text: ArrayExpress

text: FACS sorting

text: monocyte

text: steady state

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: Sample 169

characteristic: title


E-MTAB-11190:Sample 71

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: E-MTAB-11190:Sample 71

characteristic: Submitter Id

text: ArrayExpress

text: Neutrophil Isolation kit

text: normal density neutrophil

text: steady state

text: human

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 71


E-MTAB-11190:Sample 46

characteristic: ENA-LAST-UPDATE

text: public

characteristic: SRA accession

text: E-MTAB-11190:Sample 46

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Neutrophil Isolation kit

text: normal density neutrophil

text: human

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: Sample 46


E-MTAB-11190:Sample 47

characteristic: INSDC first public

text: public

text: E-MTAB-11190:Sample 47

text: ArrayExpress

text: Neutrophil Isolation kit

characteristic: cell isolation strategy

text: normal density neutrophil

characteristic: clinical history

text: human

characteristic: common name

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 47


E-MTAB-11190:Sample 48

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC last update

text: public

text: E-MTAB-11190:Sample 48

text: ArrayExpress

text: Neutrophil Isolation kit

text: normal density neutrophil

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

characteristic: sex

text: Sample 48


E-MTAB-11190:Sample 155

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: E-MTAB-11190:Sample 155

characteristic: Submitter Id

text: ArrayExpress

text: FACS sorting

text: monocyte

text: human

characteristic: immunophenotype

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 155

characteristic: title


E-MTAB-11190:Sample 49

characteristic: ENA-LAST-UPDATE

text: public

characteristic: SRA accession

text: E-MTAB-11190:Sample 49

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Neutrophil Isolation kit

text: normal density neutrophil

text: human

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: Sample 49


E-MTAB-11190:Sample 115

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

text: public

text: E-MTAB-11190:Sample 115

text: ArrayExpress

text: CD14 Microbeads

characteristic: cell isolation strategy

text: monocyte

text: intraductal papillary mucinous neoplasm

characteristic: clinical history

text: human

characteristic: common name

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 115


E-MTAB-11190:Sample 116

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: E-MTAB-11190:Sample 116

text: ArrayExpress

text: Neutrophil Isolation kit

text: normal density neutrophil

text: intraductal papillary mucinous neoplasm

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: Sample 116


E-MTAB-11190:Sample 91

characteristic: ENA-LAST-UPDATE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11190:Sample 91

characteristic: Submitter Id

text: ArrayExpress

text: CD15 Microbeads

text: low density neutrophil

text: intraductal papillary mucinous neoplasm

text: human

characteristic: immunophenotype

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 91

characteristic: title


E-MTAB-11190:Sample 92

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

text: public

text: E-MTAB-11190:Sample 92

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Neutrophil Isolation kit

text: normal density neutrophil

text: intraductal papillary mucinous neoplasm

text: human

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: female

text: Sample 92


E-MTAB-11190:Sample 160

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: public

text: E-MTAB-11190:Sample 160

text: ArrayExpress

text: FACS sorting

characteristic: cell isolation strategy

text: monocyte

text: G-CSF

characteristic: clinical history

text: human

characteristic: common name

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 160


E-MTAB-11190:Sample 57

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11190:Sample 57

text: ArrayExpress

text: Neutrophil Isolation kit

text: normal density neutrophil

text: G-CSF

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

characteristic: sex

text: Sample 57


E-MTAB-11190:Sample 170

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-11190:Sample 170

characteristic: Submitter Id

text: ArrayExpress

text: FACS sorting

text: monocyte

text: steady state

text: human

characteristic: immunophenotype

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 170

characteristic: title


E-MTAB-11190:Sample 171

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: public

text: E-MTAB-11190:Sample 171

characteristic: age

text: ArrayExpress

characteristic: broker name

text: FACS sorting

text: monocyte

text: steady state

text: human

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: female

text: Sample 171


E-MTAB-11190:Sample 72

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

text: public

text: E-MTAB-11190:Sample 72

text: ArrayExpress

text: Neutrophil Isolation kit

characteristic: cell isolation strategy

text: normal density neutrophil

text: steady state

characteristic: clinical history

text: human

characteristic: common name

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 72


E-MTAB-11190:Sample 73

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11190:Sample 73

text: ArrayExpress

text: Neutrophil Isolation kit

text: normal density neutrophil

text: steady state

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

characteristic: sex

text: Sample 73


E-MTAB-11190:Sample 137

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-11190:Sample 137

characteristic: Submitter Id

text: ArrayExpress

text: FACS sorting

text: low density neutrophil

text: intraductal papillary mucinous neoplasm

text: human

characteristic: immunophenotype

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 137

characteristic: title


E-MTAB-11190:Sample 172

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

text: public

text: E-MTAB-11190:Sample 172

characteristic: age

text: ArrayExpress

characteristic: broker name

text: FACS sorting

text: monocyte

text: intraductal papillary mucinous neoplasm

text: human

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: female

text: Sample 172


E-MTAB-11190:Sample 75

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

text: public

text: E-MTAB-11190:Sample 75

text: ArrayExpress

text: Neutrophil Isolation kit

characteristic: cell isolation strategy

text: normal density neutrophil

text: intraductal papillary mucinous neoplasm

characteristic: clinical history

text: human

characteristic: common name

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 75


E-MTAB-11190:Sample 138

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11190:Sample 138

text: ArrayExpress

text: FACS sorting

text: low density neutrophil

text: intraductal papillary mucinous neoplasm

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: Sample 138


E-MTAB-11190:Sample 173

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-11190:Sample 173

characteristic: Submitter Id

text: ArrayExpress

text: FACS sorting

text: monocyte

text: intraductal papillary mucinous neoplasm

text: human

characteristic: immunophenotype

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 173

characteristic: title


E-MTAB-11190:Sample 139

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

text: public

text: E-MTAB-11190:Sample 139

characteristic: age

text: ArrayExpress

characteristic: broker name

text: FACS sorting

text: low density neutrophil

text: intraductal papillary mucinous neoplasm

text: human

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: female

text: Sample 139


E-MTAB-11190:Sample 174

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: public

text: E-MTAB-11190:Sample 174

text: ArrayExpress

text: FACS sorting

characteristic: cell isolation strategy

text: monocyte

text: intraductal papillary mucinous neoplasm

characteristic: clinical history

text: human

characteristic: common name

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 174


E-MTAB-11190:Sample 76

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11190:Sample 76

text: ArrayExpress

text: Neutrophil Isolation kit

text: normal density neutrophil

text: intraductal papillary mucinous neoplasm

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

characteristic: sex

text: Sample 76


E-MTAB-11190:Sample 140

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-11190:Sample 140

characteristic: Submitter Id

text: ArrayExpress

text: FACS sorting

text: low density neutrophil

text: intraductal papillary mucinous neoplasm

text: human

characteristic: immunophenotype

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 140

characteristic: title


E-MTAB-11190:Sample 175

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: public

text: E-MTAB-11190:Sample 175

characteristic: age

text: ArrayExpress

characteristic: broker name

text: FACS sorting

text: monocyte

text: intraductal papillary mucinous neoplasm

text: human

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: female

text: Sample 175


E-MTAB-11190:Sample 77

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

text: public

text: E-MTAB-11190:Sample 77

text: ArrayExpress

text: Neutrophil Isolation kit

characteristic: cell isolation strategy

text: normal density neutrophil

text: intraductal papillary mucinous neoplasm

characteristic: clinical history

text: human

characteristic: common name

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 77


E-MTAB-11190:Sample 141

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11190:Sample 141

text: ArrayExpress

text: FACS sorting

text: low density neutrophil

text: intraductal papillary mucinous neoplasm

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: Sample 141


E-MTAB-11190:Sample 176

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-11190:Sample 176

characteristic: Submitter Id

text: ArrayExpress

text: FACS sorting

text: monocyte

text: intraductal papillary mucinous neoplasm

text: human

characteristic: immunophenotype

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 176

characteristic: title


E-MTAB-11190:Sample 78

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

text: public

text: E-MTAB-11190:Sample 78

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Neutrophil Isolation kit

text: normal density neutrophil

text: intraductal papillary mucinous neoplasm

text: human

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: Sample 78


E-MTAB-11190:Sample 177

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

text: public

text: E-MTAB-11190:Sample 177

text: ArrayExpress

text: FACS sorting

characteristic: cell isolation strategy

text: monocyte

text: intraductal papillary mucinous neoplasm

characteristic: clinical history

text: human

characteristic: common name

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 177


E-MTAB-11190:Sample 79

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11190:Sample 79

text: ArrayExpress

text: Neutrophil Isolation kit

text: normal density neutrophil

text: intraductal papillary mucinous neoplasm

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: Sample 79


E-MTAB-11190:Sample 178

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-11190:Sample 178

characteristic: Submitter Id

text: ArrayExpress

text: FACS sorting

text: monocyte

text: intraductal papillary mucinous neoplasm

text: human

characteristic: immunophenotype

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 178

characteristic: title


E-MTAB-11190:Sample 179

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

text: public

text: E-MTAB-11190:Sample 179

characteristic: age

text: ArrayExpress

characteristic: broker name

text: FACS sorting

text: monocyte

text: intraductal papillary mucinous neoplasm

text: human

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: Sample 179


E-MTAB-11190:Sample 95

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: public

text: E-MTAB-11190:Sample 95

text: ArrayExpress

text: FACS sorting

characteristic: cell isolation strategy

text: monocyte

text: intraductal papillary mucinous neoplasm

characteristic: clinical history

text: human

characteristic: common name

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 95


E-MTAB-11190:Sample 96

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11190:Sample 96

text: ArrayExpress

text: Neutrophil Isolation kit

text: normal density neutrophil

text: intraductal papillary mucinous neoplasm

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

characteristic: sex

text: Sample 96


E-MTAB-11190:Sample 132

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-11190:Sample 132

characteristic: Submitter Id

text: ArrayExpress

text: FACS sorting

text: low density neutrophil

text: G-CSF

text: human

characteristic: immunophenotype

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 132

characteristic: title


E-MTAB-11190:Sample 161

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: public

text: E-MTAB-11190:Sample 161

characteristic: age

text: ArrayExpress

characteristic: broker name

text: FACS sorting

text: monocyte

text: G-CSF

text: human

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: Sample 161


E-MTAB-11190:Sample 58

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

text: public

text: E-MTAB-11190:Sample 58

text: ArrayExpress

text: Neutrophil Isolation kit

characteristic: cell isolation strategy

text: normal density neutrophil

text: G-CSF

characteristic: clinical history

text: human

characteristic: common name

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 58


E-MTAB-11190:Sample 209

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11190:Sample 209

text: ArrayExpress

text: Neutrophil Isolation kit

text: normal density neutrophil

text: steady state

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: Sample 209


E-MTAB-11190:Sample 142

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-11190:Sample 142

characteristic: Submitter Id

text: ArrayExpress

text: FACS sorting

text: low density neutrophil

text: intraductal papillary mucinous neoplasm

text: human

characteristic: immunophenotype

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 142

characteristic: title


E-MTAB-11190:Sample 181

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

text: public

text: E-MTAB-11190:Sample 181

characteristic: age

text: ArrayExpress

characteristic: broker name

text: FACS sorting

text: monocyte

text: intraductal papillary mucinous neoplasm

text: human

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: female

text: Sample 181


E-MTAB-11190:Sample 81

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

text: public

text: E-MTAB-11190:Sample 81

text: ArrayExpress

text: Neutrophil Isolation kit

characteristic: cell isolation strategy

text: normal density neutrophil

text: intraductal papillary mucinous neoplasm

characteristic: clinical history

text: human

characteristic: common name

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 81


E-MTAB-11190:Sample 182

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11190:Sample 182

text: ArrayExpress

text: FACS sorting

text: monocyte

text: intraductal papillary mucinous neoplasm

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: Sample 182


E-MTAB-11190:Sample 82

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-11190:Sample 82

characteristic: Submitter Id

text: ArrayExpress

text: Neutrophil Isolation kit

text: normal density neutrophil

text: intraductal papillary mucinous neoplasm

text: human

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 82

characteristic: title


E-MTAB-11190:Sample 180

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-11190:Sample 180

characteristic: age

text: ArrayExpress

characteristic: broker name

text: FACS sorting

text: monocyte

text: intraductal papillary mucinous neoplasm

text: human

characteristic: immunophenotype

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: Sample 180


E-MTAB-11190:Sample 80

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

text: public

text: E-MTAB-11190:Sample 80

text: ArrayExpress

text: Neutrophil Isolation kit

characteristic: cell isolation strategy

text: normal density neutrophil

text: intraductal papillary mucinous neoplasm

characteristic: clinical history

text: human

characteristic: common name

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 80


E-MTAB-11190:Sample 133

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11190:Sample 133

text: ArrayExpress

text: FACS sorting

text: low density neutrophil

text: G-CSF

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

characteristic: sex

text: Sample 133


E-MTAB-11190:Sample 162

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-11190:Sample 162

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: FACS sorting

text: monocyte

text: G-CSF

text: human

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 162

characteristic: title


E-MTAB-11190:Sample 59

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

text: public

text: E-MTAB-11190:Sample 59

text: ArrayExpress

characteristic: broker name

text: Neutrophil Isolation kit

text: normal density neutrophil

text: G-CSF

text: human

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

text: Sample 59


E-MTAB-11190:Sample 74

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-11190:Sample 74

text: ArrayExpress

text: Neutrophil Isolation kit

characteristic: cell isolation strategy

text: normal density neutrophil

text: steady state

characteristic: clinical history

text: human

characteristic: common name

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: Sample 74


characteristic: External Id

text: NTNU University Museum

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:NTNU University Museum

text: Water sample

text: aquatic metagenome

characteristic: organism

text: aquatic metagenome


characteristic: ENA-CHECKLIST

text: NTNU University Museum

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Kick-sample ethanol

text: aquatic metagenome

text: aquatic metagenome


characteristic: ENA-FIRST-PUBLIC

text: NTNU University Museum

characteristic: INSDC first public

text: public

text: Control

text: aquatic metagenome

text: aquatic metagenome

characteristic: title


text: WDRC KAUST

text: public

tag: Namespace:WDRC KAUST

text: water

characteristic: environment (biome)

text: water

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Saudi Arabia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: wastewater metagenome

text: Antibiotic resistance investigation in wastewater of COVID-19 specialty hospital using metagenomics

characteristic: project name

text: wastewater metagenome

text: NGS

characteristic: sequencing method

text: wastewater

characteristic: wastewater/sludge environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Max Planck Institute for Developmental Biology

text: Single plant from a herbicide-sensitive the German reference population DE01087 (Appels Wilde Samen GmbH, Darmstadt).

characteristic: description

characteristic: estimated size

text: Germany

text: not collected

text: not collected

text: glasshouse

characteristic: growth facility

text: 23C 8 h daytime, 18C 16 h nighttime.

characteristic: isolation and growth condition

characteristic: number of replicons

text: Alopecurus myosuroides

characteristic: organism

text: blackgrass

characteristic: organism common name

text: early stem elongation

characteristic: plant developmental stage

text: Standard substrate

characteristic: plant growth medium

text: leaves

characteristic: plant structure

text: diploid

characteristic: ploidy

text: healthy

characteristic: sample health state

text: Alopecurus myosuroides

text: not provided

characteristic: source material identifiers


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: UCLA

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: gliomasphere

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: Protocols: Patient brain tumor samples were collected during surgery and glioma stem cells were purified from the samples. Glioma cells were made to grow into gliomaspheres in a growth factor cocktail containing media, prior to centrifugation and nucleic acid extraction. Total RNA was extracted and purified from cellular samples using TRIzol Reagent (Ambion, Cat# 15596018), while mRNA was purified using PolyATract mRNA Isolation Systems Kit (Promega, Cat#Z5300) from total RNA samples. RNA transcripts were fragmented into ~100 nucleotide segments and isolated for m6A enrichment using m6A Dynabeads (Synaptic Systems, Cat# 202003) for each sample. This allowed for input RNA and m6A enriched RNA to be analyzed following MeRIP-Seq using RADAR. Stranded mRNA Library Preparation Kits (Illumina, Cat# 20020594) were used for sequencing library preparations, with unique adapter indices ligated to each sample to allow for multiplexing (TruSeq RNA Single Indices Set A, Illumina, Cat# 20020492).

text: glioma

characteristic: disease

text: IDH-Mut

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: brain

characteristic: organism part

text: glioma stem cell

characteristic: progenitor cell type

text: tumor

characteristic: sampling site

text: Homo sapiens

characteristic: title


text: UCLA

text: public

characteristic: INSDC status

text: ArrayExpress

text: gliomasphere

text: not collected

text: human

characteristic: description

text: glioma

text: IDH-WT

text: not collected

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: brain

text: glioma stem cell

text: tumor

text: Homo sapiens


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: UCLA

characteristic: INSDC center name

text: public

text: ArrayExpress

text: gliomasphere

text: not collected

text: human

text: glioma

text: IDH-WT

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: brain

text: glioma stem cell

text: tumor

text: Homo sapiens

text: NHA-Vector


E-MTAB-13765:U87 Vector

text: UCLA

text: public

characteristic: SRA accession

text: E-MTAB-13765:U87 Vector

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: gliomasphere

text: not collected

text: human

text: glioma

text: IDH-WT

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: brain

text: glioma stem cell

text: tumor

text: Homo sapiens

text: U87 Vector


text: King's College London

text: public

unit: day

characteristic: age

text: ArrayExpress

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

text: Protocols: 4-day old pups from heterozygote x heterozygote matings were collected and culled by decapitation. The head was bisected and the brain removed. Half heads were put in RNAlater and the organs of Corti dissected out, separated from modiolus and lateral wall, and put in fresh RNAlater on ice. Total RNA was extracted using the SPLIT RNA extraction kit (Lexogen) according to the manufacturer’s instructions. Library generation was carried out according to the “TruSeq Stranded mRNA Sample Preparation Guide” with the corresponding kit [Illumina Inc. Cat.# RS-122-2101 or RS-122-2102]. Starting from 250ng of total RNA, mRNA was purified, fragmented, and primed for cDNA synthesis. cDNA first strand was synthesized with SuperScript-II Reverse Transcriptase (Thermo Fisher Scientific, Cat.#18064-014), followed by cDNA second strand synthesis using Illumina reagents, followed by A-tailing and adaptor ligation. Finally, the libraries were enriched by PCR.

text: mouse postnatal

characteristic: developmental stage

text: Mir96<+13G>A> homozygote

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: spiral organ of cochlea

text: Mus musculus

text: female

characteristic: sex

characteristic: strain


text: King's College London

text: public

text: ArrayExpress

text: not collected

text: house mouse

text: mouse postnatal

text: Mir96<+13G>A> wildtype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: spiral organ of cochlea

characteristic: organism part

text: Mus musculus

text: female


text: King's College London

text: public

characteristic: INSDC status

text: ArrayExpress

text: not collected

text: house mouse

characteristic: description

text: mouse postnatal

text: Mir96<+13G>A> homozygote

text: not collected

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: spiral organ of cochlea

text: Mus musculus

text: male

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: King's College London

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: ArrayExpress

text: not collected

text: house mouse

text: mouse postnatal

text: Mir96<+13G>A> wildtype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: spiral organ of cochlea

text: Mus musculus

text: male


text: King's College London

text: public

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: house mouse

text: mouse postnatal

text: Mir96<+14C>A> wildtype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: spiral organ of cochlea

text: Mus musculus

text: male


text: King's College London

text: public

text: ArrayExpress

text: not collected

text: house mouse

characteristic: common name

text: mouse postnatal

characteristic: developmental stage

text: Mir96<+14C>A> homozygote

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: spiral organ of cochlea

text: Mus musculus

text: male

characteristic: sex

characteristic: strain


text: King's College London

text: public

text: ArrayExpress

text: not collected

text: house mouse

text: mouse postnatal

text: Mir96<+14C>A> wildtype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: spiral organ of cochlea

characteristic: organism part

text: Mus musculus

text: female


text: King's College London

text: public

characteristic: INSDC status

text: ArrayExpress

text: not collected

text: house mouse

characteristic: description

text: mouse postnatal

text: Mir96<+14C>A> homozygote

text: not collected

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: spiral organ of cochlea

text: Mus musculus

text: female

characteristic: title


Efaecalis

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: INN

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: Efaecalis

text: Efaecalis

text: Norway

text: Enterococcus faecalis

text: Enterococcus faecalis

text: Efaecalis


text: IMSRL (Irish Meningitis and Sepsis Reference Laboratory

text: public

characteristic: Submitter Id

characteristic: collection date

text: Ireland

text: restricted access

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: SPN

text: human

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae


text: public

text: Ireland

text: restricted access

text: homo sapiens

text: GBS

text: human

text: Streptococcus agalactiae

text: Streptococcus agalactiae


text: University of Liverpool

text: public

text: Arctic skipper

characteristic: common name

text: Carterocephalus palaemon wing-clip collected in Wallonia region of Belgium stored and transported in ethanol.

text: Belgium

text: Carterocephalus palaemon

text: Carterocephalus palaemon


text: University of Liverpool

text: public

text: Arctic skipper

text: Carterocephalus palaemon wing-clip collected in Fineshade wood, United Kingdom from the reintroduced population, stored and transported in ethanol.

text: United Kingdom

text: Carterocephalus palaemon

text: Carterocephalus palaemon


text: Emory University

text: public

text: house mouse

text: Stool in a control mouse 24 h after cecal ligation&puncture surgery

text: USA

text: Mus musculus

text: Mus musculus

text: CLPPBS


text: After

characteristic: Exposure

text: Scripps Institution of Oceanography

text: public

text: Pacific oyster

unit: days

text: oyster tissue exposed to OsHV1 but appears healthy

text: alive

text: Host-associated

text: Host-associated (saline)

text: Animal corpus (saline)

text: Animal corpus (saline)

text: oyster body

text: USA

unit: copies

text: Crassostrea gigas

unit: grams

text: UCSD:SIO

text: D/RNA shield

text: Crassostrea gigas

text: whole oyster tissue


text: not applicable

text: Scripps Institution of Oceanography

text: public

text: not provided

text: not applicable

text: Blank

text: not applicable

text: Control

text: Negative

text: Sterile water blank

text: Sterile water blank

text: not applicable

text: USA

characteristic: geographic location (country and/or sea)

text: not applicable

text: blank sample

text: not applicable

text: not applicable

text: not applicable

text: blank sample

text: not applicable


text: not applicable

text: Scripps Institution of Oceanography

text: public

text: not provided

text: not applicable

text: Positive Control

text: not applicable

text: Control

text: Positive

text: Mock community

text: Mock community

text: not applicable

text: USA

text: not applicable

text: blank sample

text: not applicable

text: not applicable

text: not applicable

text: blank sample

text: not applicable


Ctl.ZymoPCR.B

text: not applicable

text: Scripps Institution of Oceanography

text: public

text: Ctl.ZymoPCR.B

text: not provided

text: not applicable

text: Positive Control

text: not applicable

text: Control

text: Positive

text: Mock community

text: Mock community

text: not applicable

text: USA

text: not applicable

text: blank sample

text: not applicable

text: not applicable

text: not applicable

text: blank sample

text: not applicable

text: Ctl.ZymoPCR.B


characteristic: Forward Sequence

text: LINNAEUS UNIVERISTY

text: public

characteristic: Reverse Sequence

text: subpolar biome (ENVO_01001834)

characteristic: broad-scale environmental context

unit: m

characteristic: depth

text: Parent sediment - start pt - whole

characteristic: elevation

text: sulphate-reducing sediement (ENVO_01000153)

characteristic: environmental medium

text: Finland

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: coastal plain (ENVO_00000090)

characteristic: local environmental context

text: sediment metagenome

text: Metastable iron sulfide incubations, Geochemical and microbial dynamics

characteristic: pcr primers

characteristic: project name

text: sediment metagenome

characteristic: sequencing method

characteristic: target gene

characteristic: target subfragment


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: LINNAEUS UNIVERISTY

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: subpolar biome (ENVO_01001834)

characteristic: collection date

text: Parent sediment - start pt - whole

characteristic: description

text: Finland

text: coastal plain (ENVO_00000090)

text: sediment metagenome

characteristic: organism

text: 341F (CCTACGGGNGGCWGCAG) and 805R (GACTACHVGGGTATCTAATCC)

text: sediment metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: title


characteristic: Forward Sequence

text: LINNAEUS UNIVERISTY

text: public

characteristic: Reverse Sequence

text: subpolar biome (ENVO_01001834)

characteristic: broad-scale environmental context

characteristic: depth

text: JK (CaCO3) - 40 kg/m3 - mid pt - whole

characteristic: elevation

characteristic: environmental medium

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: coastal plain (ENVO_00000090)

text: sediment metagenome

text: sediment metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: LINNAEUS UNIVERISTY

characteristic: INSDC center name

text: public

text: subpolar biome (ENVO_01001834)

text: Reference - mid pt - whole

text: Finland

text: coastal plain (ENVO_00000090)

characteristic: local environmental context

text: sediment metagenome

characteristic: pcr primers

characteristic: project name

text: sediment metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: Forward Sequence

text: LINNAEUS UNIVERISTY

text: public

characteristic: INSDC status

characteristic: Reverse Sequence

characteristic: SRA accession

characteristic: Submitter Id

text: subpolar biome (ENVO_01001834)

characteristic: collection date

text: C2 (CaCO3) - 40 kg/m3 - mid pt - whole

characteristic: description

text: Finland

text: coastal plain (ENVO_00000090)

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: LINNAEUS UNIVERISTY

text: public

text: subpolar biome (ENVO_01001834)

characteristic: broad-scale environmental context

characteristic: depth

text: JK (CaCO3) - 10 kg/m3 - mid pt - whole

characteristic: elevation

characteristic: environmental medium

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: coastal plain (ENVO_00000090)

text: sediment metagenome

text: sediment metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA


characteristic: Forward Sequence

text: LINNAEUS UNIVERISTY

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: subpolar biome (ENVO_01001834)

text: 10 kg/m3 C2 + 10 kg/m3 peat - mid pt - whole

text: Finland

text: coastal plain (ENVO_00000090)

characteristic: local environmental context

text: sediment metagenome

characteristic: pcr primers

characteristic: project name

text: sediment metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: LINNAEUS UNIVERISTY

text: public

characteristic: Reverse Sequence

characteristic: SRA accession

characteristic: Submitter Id

text: subpolar biome (ENVO_01001834)

characteristic: collection date

text: C2 (CaCO3) - 10 kg/m3 - mid pt - whole

characteristic: description

text: Finland

text: coastal plain (ENVO_00000090)

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: title


characteristic: Forward Sequence

text: LINNAEUS UNIVERISTY

characteristic: INSDC center name

text: public

text: subpolar biome (ENVO_01001834)

characteristic: broad-scale environmental context

characteristic: depth

text: JK (CaCO3) - 40 kg/m3 - end pt - surface

characteristic: elevation

characteristic: environmental medium

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: coastal plain (ENVO_00000090)

text: sediment metagenome

text: sediment metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: LINNAEUS UNIVERISTY

text: public

characteristic: INSDC status

text: subpolar biome (ENVO_01001834)

text: JK (CaCO3) - 40 kg/m3 - end pt - bulk

text: Finland

text: coastal plain (ENVO_00000090)

characteristic: local environmental context

text: sediment metagenome

characteristic: pcr primers

characteristic: project name

text: sediment metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: Forward Sequence

text: LINNAEUS UNIVERISTY

characteristic: INSDC center name

text: public

characteristic: Reverse Sequence

characteristic: SRA accession

characteristic: Submitter Id

text: subpolar biome (ENVO_01001834)

characteristic: collection date

text: Reference - end pt - surface

characteristic: description

text: Finland

text: coastal plain (ENVO_00000090)

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: LINNAEUS UNIVERISTY

text: public

text: subpolar biome (ENVO_01001834)

characteristic: broad-scale environmental context

characteristic: depth

text: Reference - end pt - bulk

characteristic: elevation

characteristic: environmental medium

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: coastal plain (ENVO_00000090)

text: sediment metagenome

text: sediment metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA


characteristic: Forward Sequence

text: LINNAEUS UNIVERISTY

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: subpolar biome (ENVO_01001834)

text: C2 (CaCO3) - 40 kg/m3 - end pt - surface

text: Finland

text: coastal plain (ENVO_00000090)

characteristic: local environmental context

text: sediment metagenome

characteristic: pcr primers

characteristic: project name

text: sediment metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: LINNAEUS UNIVERISTY

text: public

characteristic: Reverse Sequence

characteristic: SRA accession

characteristic: Submitter Id

text: subpolar biome (ENVO_01001834)

characteristic: collection date

text: C2 (CaCO3) - 40 kg/m3 - end pt - bulk

characteristic: description

text: Finland

text: coastal plain (ENVO_00000090)

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: title


characteristic: Forward Sequence

text: LINNAEUS UNIVERISTY

characteristic: INSDC center name

text: public

text: subpolar biome (ENVO_01001834)

characteristic: broad-scale environmental context

characteristic: depth

text: JK (CaCO3) - 10 kg/m3 - end pt - surface

characteristic: elevation

characteristic: environmental medium

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: coastal plain (ENVO_00000090)

text: sediment metagenome

text: sediment metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: LINNAEUS UNIVERISTY

text: public

characteristic: INSDC status

text: subpolar biome (ENVO_01001834)

text: JK (CaCO3) - 10 kg/m3 - end pt - bulk

text: Finland

text: coastal plain (ENVO_00000090)

characteristic: local environmental context

text: sediment metagenome

characteristic: pcr primers

characteristic: project name

text: sediment metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: Forward Sequence

text: LINNAEUS UNIVERISTY

characteristic: INSDC center name

text: public

characteristic: Reverse Sequence

characteristic: SRA accession

characteristic: Submitter Id

text: subpolar biome (ENVO_01001834)

characteristic: collection date

text: 10 kg/m3 C2 + 10 kg/m3 peat - end pt - surface

characteristic: description

text: Finland

text: coastal plain (ENVO_00000090)

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: LINNAEUS UNIVERISTY

text: public

text: subpolar biome (ENVO_01001834)

characteristic: broad-scale environmental context

characteristic: depth

text: 10 kg/m3 C2 + 10 kg/m3 peat - end pt - bulk

characteristic: elevation

characteristic: environmental medium

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: coastal plain (ENVO_00000090)

text: sediment metagenome

text: sediment metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA


characteristic: Forward Sequence

text: LINNAEUS UNIVERISTY

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: subpolar biome (ENVO_01001834)

text: C2 (CaCO3) - 10 kg/m3 - end pt - surface

text: Finland

text: coastal plain (ENVO_00000090)

characteristic: local environmental context

text: sediment metagenome

characteristic: pcr primers

characteristic: project name

text: sediment metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: LINNAEUS UNIVERISTY

text: public

characteristic: Reverse Sequence

characteristic: SRA accession

characteristic: Submitter Id

text: subpolar biome (ENVO_01001834)

characteristic: collection date

text: C2 (CaCO3) - 10 kg/m3 - end pt - bulk

characteristic: description

text: Finland

text: coastal plain (ENVO_00000090)

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: title


text: IHU - Mediterranee Infection

characteristic: INSDC center name

text: public

text: Polyphasic approach to detect, to isolate and to characterise candidate phyla radiation in human saliva

text: France

characteristic: geographic location (country and/or sea)

text: human saliva

text: Candidatus Minimicrobia sp. QA0096

text: Candidatus Minimicrobia sp. QA0096

characteristic: strain


text: Eawag

text: University of Konstanz

characteristic: collecting institution

text: Eva Lievens

characteristic: collector name

text: chemostat experiment

text: not applicable

text: Germany

text: Chlorella variabilis NC64A

characteristic: host scientific name

characteristic: isolate

text: Paramecium bursaria Chlorella virus 1

text: Paramecium bursaria Chlorella virus 1


characteristic: GISAID Accession ID

text: Centre Hospitalier Universitaire Montpellier

text: public

characteristic: INSDC status

text: CHU Montpellier, Fr

text: Not collected

text: Original cell passage

text: France

text: Hérault

characteristic: geographic location (region and locality)

unit: years

characteristic: host age

text: Human

characteristic: host common name

text: not collected

characteristic: host health state

text: Homo Sapiens

text: male

characteristic: host sex

characteristic: host subject id

text: hCoV-19/France/OCC-ChuMtp-99223613314/2022

text: Severe acute respiratory syndrome coronavirus 2

characteristic: receipt date

text: active surveillance in response to outbreak

characteristic: sample capture status

text: drag and drop uploader tool


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: CHU Montpellier, Fr

characteristic: collection date

text: Not collected

text: Original cell passage

characteristic: description

text: France

text: Hérault

text: Human

text: not collected

text: Homo Sapiens

text: male

text: hCoV-19/France/OCC-ChuMtp-99223613531/2022

characteristic: organism

text: drag and drop uploader tool

characteristic: title


characteristic: GISAID Accession ID

text: public

characteristic: INSDC status

text: CHU Montpellier, Fr

characteristic: collecting institution

text: Not collected

characteristic: collector name

text: Original cell passage

text: France

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