text: public

text: human

text: RPE1 cells treated with DMSO for 24hrs then sorted using flow cytometry to identify late S-early G2 phase fraction

text: Homo sapiens

text: Homo sapiens


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:EUROPEAN RESEARCH INSTITUTE FOR THE BIOLOGY OF AGEING, UNIVERSITY OF GRONINGEN, UNIVERSITY MEDICAL CENTER GRONINGEN

characteristic: Submitter Id

text: human

characteristic: common name

text: BJ cells treated with DMSO for 24hrs then sorted using flow cytometry to identify mid-late S phase fraction

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: title


text: EUROPEAN RESEARCH INSTITUTE FOR THE BIOLOGY OF AGEING, UNIVERSITY OF GRONINGEN, UNIVERSITY MEDICAL CENTER GRONINGEN

text: public

text: human

text: BJ cells treated with DMSO for 24hrs then sorted using flow cytometry to identify late S-early G2 phase fraction

text: Homo sapiens

text: Homo sapiens


text: public

text: Thirty_cell_minibulk_BJ_cells_Late_G1_Early_S

text: human

text: BJ cells treated with DMSO for 24hrs then sorted using flow cytometry to identify late G1-early S phase fraction

text: Homo sapiens

text: Homo sapiens


text: public

text: Thirty_cell_minibulk_BJ_cells_Early_S_Mid_S

text: human

text: BJ cells treated with DMSO for 24hrs then sorted using flow cytometry to identify early-mid S phase fraction

text: Homo sapiens

text: Homo sapiens


text: public

text: Thirty_cell_minibulk_BJ_cells_Mid_S_Late_S

text: human

text: Homo sapiens

text: Homo sapiens


text: public

text: Thirty_cell_minibulk_BJ_cells_Late_S_Early_G2

text: human

text: Homo sapiens

text: Homo sapiens


text: public

text: Thirty_cell_minibulk_RPE1_cells_Late_G1_Early_S

text: human

text: RPE1 cells treated with DMSO for 24hrs then sorted using flow cytometry to identify late G1-early S phase fraction

text: Homo sapiens

text: Homo sapiens


text: public

text: Thirty_cell_minibulk_RPE1_cells_Early_S_Mid_S

text: human

text: RPE1 cells treated with DMSO for 24hrs then sorted using flow cytometry to identify early-mid S phase fraction

text: Homo sapiens

text: Homo sapiens


text: public

text: Thirty_cell_minibulk_RPE1_cells_Mid_S_Late_S

text: human

text: RPE1 cells treated with DMSO for 24hrs then sorted using flow cytometry to identify mid-late S phase fraction

text: Homo sapiens

text: Homo sapiens


text: public

text: Thirty_cell_minibulk_RPE1_cells_Late_S_Early_G2

text: human

text: Homo sapiens

text: Homo sapiens


text: public

text: Single_cell_RPE1_Aphidicolin_cells_Late_G1_Early_S

text: human

text: RPE1 cells treated with 0.4uM aphidicolin for 24hrs then sorted using flow cytometry to identify late G1-early S phase fraction

text: Homo sapiens

text: Homo sapiens


text: EUROPEAN RESEARCH INSTITUTE FOR THE BIOLOGY OF AGEING, UNIVERSITY OF GRONINGEN, UNIVERSITY MEDICAL CENTER GRONINGEN

text: public

text: Single_cell_RPE1_Aphidicolin_cells_Early_S_Mid_S

text: human

text: RPE1 cells treated with 0.4uM aphidicolin for 24hrs then sorted using flow cytometry to identify early-mid S phase fraction

text: Homo sapiens

text: Homo sapiens


text: public

text: Single_cell_RPE1_Aphidicolin_cells_Mid_S_Late_S

text: human

text: RPE1 cells treated with 0.4uM aphidicolin for 24hrs then sorted using flow cytometry to identify mid-late S phase fraction

text: Homo sapiens

text: Homo sapiens


text: public

text: Single_cell_RPE1_Aphidicolin_cells_Late_S_Early_G2

text: human

text: RPE1 cells treated with 0.4uM aphidicolin for 24hrs then sorted using flow cytometry to identify late S-early G2 phase fraction

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: RPE1 cells treated with DMSO for 24hrs

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: RPE1 cells treated with 0.4uM aphidicolin for 24hrs

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: RPE1 cells treated with 2 mM hydroxyurea for 16hrs then released from drug for 18hrs

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: BJ cells treated with 0.4uM aphidicolin for 24hrs

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: RPE1 cells treated with siRNA (scrambled control) for 48hrs then with DMSO for further 24hrs

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: RPE1 cells treated with siRNA (against Mus81) for 48hrs then with DMSO for further 24hrs

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: RPE1 cells treated with siRNA (against Mus81) for 48hrs then with 0.4 uM aphidicolin for further 24hrs

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: RPE1 cells treated with siRNA (scrambled control) for 48hrs then with 0.4 uM aphidicolin for further 24hrs

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: BJ cells treated with DMSO for 24hrs

text: Homo sapiens

text: Homo sapiens


text: MJuarezFernandez

text: public

text: Gut

characteristic: broad-scale environmental context

characteristic: collection date

text: house mouse

text: Cecal

characteristic: environmental medium

text: Spain

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Cecum

characteristic: local environmental context

text: Mus musculus

text: Enhanced_mitochondrial_activity_reshapes_a_gut_microbiota_profile_that_delays_NASH_progression

characteristic: project name

text: Mus musculus

text: MiSeq

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:University of Copenhagen

text: tempreate biome

unit: m

characteristic: depth

characteristic: elevation

text: beech forest soil

text: Denmark

text: Denmark, Sj�lland, Str�dam

characteristic: geographic location (region and locality)

text: temperate woodland biome

text: soil metagenome

unit: g

characteristic: sample weight for DNA extraction

text: soil metagenome

text: Illumina

text: A horizon

characteristic: soil horizon

text: Luvisol

characteristic: soil type

text: frozen

characteristic: storage conditions (fresh/frozen/other)


text: LUND UNIVERSITY

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12182:Notophthalmus viridescens spleen

tag: Namespace:LUND UNIVERSITY

characteristic: Submitter Id

text: unknown years

characteristic: age

text: ArrayExpress

characteristic: broker name

characteristic: cell multiplexing oligo (cmo)

text: splenocyte

text: eastern newt

characteristic: common name

text: Protocols: Newts were narcotized in 0.05% tricaine (MS222) in housing water. Spleens were harvested from two separate Pleurodeles waltl and processed as individual samples in parallel and from two Notophthalmus viridescens which were pooled as one sample. These three samples were then . All animals were sexually mature adults and included: one female Notophthalmus viridescens (4.45g and 10.6cm snout-to-tail) and one male Notophthalmus viridescens (3.55g and 10.2cm) (as a pooled sample), and one Pleurodeles waltl tgSceI(CAG:loxP-GFP-loxP-Cherry)Simon female (23.5g and 16.1cm snout-to-tail length), one male Pleurodeles waltl tgSceI(CAG:loxP-GFP-loxP-Cherry)Simon (13.95g and 15.7cm). Forceps and iridectomy scissors were used to remove the spleen in one piece, making sure that the forceps did not tear the spleen. Iridectomy scissors were used to carefully remove connective tissue. A 70μm nylon mesh filter was inserted into a 50mL conical and 1mL of ice cold 0.7X PBS was added to pre-wet the filter. The spleen was placed on the pre-wetted filter and slowly mashed through the filter using the plunger stopper end of a 3mL syringe. Once the spleen appeared translucent, the plunger and filter were thoroughly washed with ~10mL ice cold 0.7X PBS and making sure no PBS was left on the plunger or filter. The 0.7X PBS solution was then poured into a 15mL conical and centrifuged at 300g for 5 min in a swinging bucket rotor. Supernatant was decanted and Notophthalmus cells were resuspended in 1mL of 0.7X PBS with 0.04% ultrapure BSA. For Pleurodeles spleens only: After the spleen was thoroughly mashed through the pre-wetted 70μm nylon filter and the filter was washed with 10mL of 0.7X PBS the cells were centrifuged at 300g for 5 min. Splenocytes were resuspended cells in 1mL of sterile filtered 1X ACK (http://cshprotocols.cshlp.org/content/2014/11/pdb.rec083295.short) to lyse red blood cells. After one minute of lysis, cells were diluted with 10mL of 0.7X PBS and filtered through a 70μm nylon mesh filter and centrifuged at 300g for 5 min. Cells were then resuspended 0.7X PBS with 0.04% ultrapure BSA. Once single cell suspensions were obtained cells these three samples were stained with Cellplex reagents from 10x Genomics. The pooled Notophthalmus sample and the individual Pleurodeles samples were then taken through the 10x Genomics 3’ Cellplex labeling protocol (Demonstrated Protocol, CG000391) the only modifications being the use of 0.7X PBS + 0.04% BSA for all wash and resuspension steps. Samples were stained with CM304 (Pleurodeles female), CMO305 (Pleurodeles male), and CMO306 (pool of Notophthalmus samples). Cells were then counted using trypan blue to assess viability. Cells were then manually counted and adjusted to a concentration targeting the collection of 9,000 cells on the 10x Genomics Chromium controller.

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: pool

characteristic: individual

characteristic: number of cells detected

text: Notophthalmus viridescens

characteristic: organism

text: Notophthalmus viridescens

text: spleen

characteristic: organism part

text: Notophthalmus viridescens

text: mixed

characteristic: sex

text: female 4.45, male 3.55

unit: centimeter

characteristic: snout-to-tail-length

text: wild type

characteristic: strain

text: Notophthalmus viridescens spleen

characteristic: title

text: female 10.6, male 10.2

unit: gram

characteristic: weight


name: E-MTAB-12182:Pleurodeles waltl spleen #1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LUND UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 1.5 years

text: ArrayExpress

text: splenocyte

text: Iberian ribbed newt

text: adult

text: wild type genotype

text: yes

text: Pleurodeles waltl

text: Pleurodeles waltl

text: spleen

text: Pleurodeles waltl

text: female

text: tgSceI(CAG:loxP-GFP-loxP-Cherry)Simon

text: Pleurodeles waltl spleen #1


name: E-MTAB-12182:Pleurodeles waltl spleen #2

text: LUND UNIVERSITY

text: public

text: 1.5 years

characteristic: age

text: ArrayExpress

characteristic: broker name

characteristic: cell multiplexing oligo (cmo)

text: splenocyte

text: Iberian ribbed newt

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: yes

characteristic: individual

characteristic: number of cells detected

text: Pleurodeles waltl

characteristic: organism

text: Pleurodeles waltl

text: spleen

text: Pleurodeles waltl

text: male

text: tgSceI(CAG:loxP-GFP-loxP-Cherry)Simon

text: Pleurodeles waltl spleen #2


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIPH

text: public

text: ELIXIR-Norway

text: S. pyogenes

text: GAS routine sample

text: Norway

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: Blood

text: Streptococcus pyogenes

text: Streptococcus pyogenes

characteristic: title


text: Anthony Smith, NICD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Anthony Smith, NICD

characteristic: Submitter Id

text: EnteroBase

characteristic: broker name

text: EnteroBase

text: A. Smith, National Institute for Communicable Diseases

text: Whole genome sequencing data uploaded by EnteroBase user

text: South Africa, Gauteng

characteristic: geographic location

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis

characteristic: serovar

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

characteristic: description

text: South Africa, Limpopo

text: Human, Blood culture

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Enteritidis


characteristic: External Id

text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Mpumalanga

text: Human, Urine

text: Salmonella enterica

text: Salmonella enterica

text: Manhattan


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Limpopo

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Muenchen

characteristic: title


text: Anthony Smith, NICD

characteristic: INSDC center name

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, KwaZulu-Natal

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis


text: Anthony Smith, NICD

characteristic: INSDC first public

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Western Cape

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis


text: Anthony Smith, NICD

characteristic: INSDC last update

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Western Cape

text: Human, Urine

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis


text: Anthony Smith, NICD

text: public

characteristic: INSDC status

text: EnteroBase

text: EnteroBase

text: South Africa, Gauteng

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis


text: Anthony Smith, NICD

text: public

characteristic: SRA accession

text: EnteroBase

text: EnteroBase

text: South Africa, Gauteng

text: Human, Urine

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis


text: TU MUNICH

text: public

tag: Namespace:TU MUNICH

characteristic: Submitter Id

text: human

characteristic: common name

text: Human blood sample

text: Homo sapiens

text: Homo sapiens


text: UCSD Health

text: public

tag: Namespace:UCSD Health

text: E. coli isolate from mouse stool

text: Escherichia coli

text: Native E. coli isolated from C57BL/6 male mouse

characteristic: project name

text: Escherichia coli

characteristic: sequencing method


text: public

tag: Namespace:Laboratory of Genomics and Bioinformatics, Comenius University Science Park

text: Science Park of Comenius University of Bratislava

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Slovakia

characteristic: geographic location (country and/or sea)

unit: year

characteristic: host age

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: RNA

characteristic: isolate

text: Nasopharyngeal swab

characteristic: isolation source-host associated

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Laboratory of Genomics and Bioinformatics, Comenius University Science Park

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

text: Slovakia

text: Human

text: not provided

text: Homo sapiens

text: male

text: RNA

text: Nasopharyngeal swab

characteristic: organism


text: public

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Slovakia

characteristic: geographic location (country and/or sea)

characteristic: host age

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: RNA

text: Nasopharyngeal swab


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: not provided

text: Slovakia

unit: month

text: Human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: RNA

characteristic: isolate

text: Nasopharyngeal swab

characteristic: isolation source-host associated

characteristic: sample capture status


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Public Health Authority of the Slovak Republic

characteristic: Submitter Id

characteristic: broker name

characteristic: collecting institution

text: not provided

text: Monkeypox virus

text: Slovakia

text: Human

text: not provided

text: Homo sapiens

text: male

text: RNA

text: swab from blister

text: Monkeypox virus

characteristic: organism

text: Monkeypox virus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Public Health Authority of the Slovak Republic

text: public

characteristic: collection date

text: not provided

characteristic: collector name

text: Monkeypox virus

characteristic: common name

text: Slovakia

characteristic: geographic location (country and/or sea)

characteristic: host age

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: RNA

text: swab from blister

text: Monkeypox virus

text: Monkeypox virus


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:Regional Public Health Authority with the seat in Banská Bystrica, Slovakia

text: not provided

text: Slovakia

text: Human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: RNA

characteristic: isolate

text: Nasopharyngeal swab

characteristic: isolation source-host associated

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Regional Public Health Authority with the seat in Banská Bystrica, Slovakia

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: broker name

characteristic: collecting institution

text: not provided

text: Slovakia

text: Human

text: not provided

text: Homo sapiens

text: female

text: RNA

text: Nasopharyngeal swab

characteristic: organism


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Slovakia

characteristic: geographic location (country and/or sea)

characteristic: host age

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: RNA

text: Nasopharyngeal swab


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: not provided

text: Slovakia

text: Human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: RNA

characteristic: isolate

text: Nasopharyngeal swab

characteristic: isolation source-host associated

characteristic: sample capture status


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: broker name

characteristic: collecting institution

text: not provided

text: Slovakia

text: Human

text: not provided

text: Homo sapiens

text: female

text: RNA

text: Other

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Slovakia

characteristic: geographic location (country and/or sea)

characteristic: host age

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: RNA

text: Other


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Anthony Smith, NICD

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: EnteroBase

text: EnteroBase

characteristic: description

text: South Africa, Western Cape

characteristic: geographic location

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis

characteristic: serovar

characteristic: strain

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Anthony Smith, NICD

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: EnteroBase

characteristic: broker name

text: EnteroBase

text: South Africa, Western Cape

text: Human, Other

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Manhattan


characteristic: ENA-LAST-UPDATE

text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Northern Cape

text: Human, Other

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis


characteristic: External Id

text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Western Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Infantis


text: Anthony Smith, NICD

characteristic: INSDC center name

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Gauteng

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Bredeney


text: Anthony Smith, NICD

characteristic: INSDC first public

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Western Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Hadar


text: MAX PLANCK INSTITUE OF CHEMCIAL ECOLOGY

text: public

tag: Namespace:MAX PLANCK INSTITUE OF CHEMCIAL ECOLOGY

text: large cabbage white

characteristic: common name

characteristic: description

text: Pieris brassicae

text: Pieris brassicae


text: public

tag: Namespace:MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY

text: Text preceeding underscore is the study ID; the number that follows is the replicate number.

text: human gut metagenome

text: human gut metagenome


text: MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY

text: public

text: human gut metagenome

text: human gut metagenome


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/CE-NVRL-S22IRL00426630/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

text: Europe / Ireland / Clare

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

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characteristic: title


text: NVRL

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text: Irish Consortium for Sequencing Covid

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characteristic: collecting institution

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text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

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characteristic: host age

text: human

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text: Homo sapiens

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text: male

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characteristic: isolation source host-associated

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text: hCoV-19/Ireland/CE-NVRL-S22IRL00426605/2022


characteristic: ENA-CHECKLIST

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characteristic: broker name

text: National Virus Reference Laboratory

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text: human

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characteristic: organism

text: hCoV-19/Ireland/CE-NVRL-S22IRL00426637/2022

characteristic: virus identifier


text: NVRL

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characteristic: collecting institution

text: not provided

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text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

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text: NVRL

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characteristic: collecting institution

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characteristic: geographic location (country and/or sea)

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text: Europe / Ireland / Clare

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characteristic: organism

text: hCoV-19/Ireland/CE-NVRL-S22IRL00426844/2022

characteristic: title


text: NVRL

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characteristic: collecting institution

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text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

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text: Europe / Ireland / Clare

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text: female

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text: hCoV-19/Ireland/CE-NVRL-S22IRL00426614/2022


characteristic: ENA-CHECKLIST

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text: Irish Consortium for Sequencing Covid

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text: National Virus Reference Laboratory

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text: Europe / Ireland / Cavan

text: human

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text: Homo sapiens

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text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: hCoV-19/Ireland/CN-NVRL-S22IRL00426395/2022

characteristic: virus identifier


text: NVRL

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text: Irish Consortium for Sequencing Covid

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characteristic: collecting institution

text: not provided

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text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

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text: Europe / Ireland / Cavan

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characteristic: ENA-CHECKLIST

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characteristic: organism

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text: hCoV-19/Ireland/CN-NVRL-S22IRL00426401/2022


text: NVRL

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text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

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text: Ireland

characteristic: geographic location (country and/or sea)

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text: Europe / Ireland / Cavan

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characteristic: title


text: NVRL

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text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

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text: hCoV-19/Ireland/CN-NVRL-S22IRL00426738/2022


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characteristic: virus identifier


text: NVRL

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characteristic: collecting institution

text: not provided

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text: Europe / Ireland / Cavan

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text: hCoV-19/Ireland/CN-NVRL-S22IRL00408282/2022


text: NVRL

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text: Europe / Ireland / Cavan

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text: Europe / Ireland / Cork

text: human

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text: Homo sapiens

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characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-S22IRL00426768/2022

characteristic: title


text: NVRL

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characteristic: geographic location (country and/or sea)

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text: Europe / Ireland / Cork

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text: hCoV-19/Ireland/CO-NVRL-S22IRL00426912/2022


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text: National Virus Reference Laboratory

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text: human

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characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-S22IRL00427086/2022

characteristic: virus identifier


text: NVRL

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text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

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text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

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text: Europe / Ireland / Cork

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text: National Virus Reference Laboratory

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text: Ireland

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00427106/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

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text: Ireland

characteristic: geographic location (country and/or sea)

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text: Europe / Ireland / Cork

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characteristic: virus identifier


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text: Ireland

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

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text: not provided

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characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-S22IRL00426777/2022

characteristic: title


text: NVRL

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

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characteristic: geographic location (country and/or sea)

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text: Europe / Ireland / Cork

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text: hCoV-19/Ireland/CO-NVRL-S22IRL00426895/2022


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text: Ireland

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text: hCoV-19/Ireland/CO-NVRL-S22IRL00426778/2022

characteristic: virus identifier


text: NVRL

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

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text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

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text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

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text: Homo sapiens

text: male

text: not provided

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characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00408622/2022


text: NVRL

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characteristic: collecting institution

text: not provided

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characteristic: geographic location (country and/or sea)

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text: Europe / Ireland / Cork

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text: Ireland

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text: human

text: not provided

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text: Homo sapiens

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characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-S22IRL00408628/2022

characteristic: title


text: NVRL

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

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text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00408617/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

text: NVRL

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-S22IRL00408929/2022

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/CO-NVRL-S22IRL00437172/2022

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

text: NVRL

characteristic: INSDC center name

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characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

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text: Ireland

text: Europe / Ireland / Cork

text: human

text: not provided

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text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00437339/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

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text: human

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text: Homo sapiens

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text: male

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text: not provided

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/CW-NVRL-S22IRL00426659/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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text: NVRL

characteristic: INSDC center name

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text: public

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characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

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text: Ireland

text: Europe / Ireland / Carlow

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: hCoV-19/Ireland/CW-NVRL-S22IRL00426670/2022

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

characteristic: host health state

text: Homo sapiens

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text: female

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text: not provided

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text: Oro-Nasopharyngeal swab

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text: active surveillance in response to outbreak

characteristic: sample capture status

text: hCoV-19/Ireland/CW-NVRL-S22IRL00430670/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

text: NVRL

characteristic: INSDC center name

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characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

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text: Ireland

text: Europe / Ireland / Carlow

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CW-NVRL-S22IRL00430669/2022

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: Homo sapiens

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text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/CW-NVRL-S22IRL00435889/2022

characteristic: title


characteristic: ENA-CHECKLIST

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text: NVRL

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characteristic: SRA accession

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

text: not provided

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text: Ireland

text: Europe / Ireland / Carlow

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CW-NVRL-S22IRL00437597/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: Homo sapiens

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text: male

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text: not provided

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/D-NVRL-S22IRL00427207/2022

characteristic: virus identifier


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text: Irish Consortium for Sequencing Covid

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text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

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text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00426796/2022

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

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text: Homo sapiens

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text: female

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text: not provided

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/D-NVRL-S22IRL00427201/2022


characteristic: ENA-CHECKLIST

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text: NVRL

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characteristic: SRA accession

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

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text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

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characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00433760/2022

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

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text: female

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text: not provided

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text: hCoV-19/Ireland/D-NVRL-S22IRL00426712/2022

characteristic: title


characteristic: ENA-CHECKLIST

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text: NVRL

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characteristic: SRA accession

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

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text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00427056/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

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text: female

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text: not provided

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text: hCoV-19/Ireland/D-NVRL-S22IRL00427253/2022

characteristic: virus identifier


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text: Irish Consortium for Sequencing Covid

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text: National Virus Reference Laboratory

text: not provided

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text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00409505/2022

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

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text: Homo sapiens

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text: male

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text: not provided

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/D-NVRL-S22IRL00430708/2022


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: NVRL

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text: Irish Consortium for Sequencing Covid

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text: National Virus Reference Laboratory

text: not provided

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characteristic: common name

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text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00430725/2022

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

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text: Homo sapiens

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text: female

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text: not provided

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text: active surveillance in response to outbreak

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characteristic: title


characteristic: ENA-CHECKLIST

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text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

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text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00430649/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

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text: Europe / Ireland / Dublin

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characteristic: virus identifier


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text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

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characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00430734/2022

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

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text: male

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text: not provided

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text: hCoV-19/Ireland/D-NVRL-S22IRL00409391/2022


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text: National Virus Reference Laboratory

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characteristic: common name

characteristic: description

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00409395/2022

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

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text: female

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text: not provided

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text: hCoV-19/Ireland/D-NVRL-S22IRL00409520/2022

characteristic: title


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text: National Virus Reference Laboratory

text: not provided

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text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00409518/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

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text: Europe / Ireland / Dublin

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text: male

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text: not provided

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characteristic: virus identifier


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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

text: not provided

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characteristic: common name

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text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00408318/2022

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

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text: not provided

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/D-NVRL-S22IRL00409517/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

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text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00435829/2022

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

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text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/D-NVRL-S22IRL00435956/2022

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00435977/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

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text: human

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text: not provided

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text: Homo sapiens

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text: female

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text: not provided

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text: Oro-Nasopharyngeal swab

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text: active surveillance in response to outbreak

text: hCoV-19/Ireland/D-NVRL-S22IRL00437049/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: NVRL

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text: public

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00437017/2022

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

characteristic: host health state

text: Homo sapiens

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text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00437007/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

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text: public

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characteristic: SRA accession

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00437135/2022

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

characteristic: host disease outcome

text: not provided

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text: Homo sapiens

characteristic: host scientific name

text: male

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text: not provided

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text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/D-NVRL-S22IRL00435968/2022

characteristic: title


characteristic: ENA-CHECKLIST

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text: NVRL

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characteristic: SRA accession

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00435823/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/D-NVRL-S22IRL00435826/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

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text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00435896/2022

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00435925/2022


characteristic: ENA-CHECKLIST

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text: NVRL

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text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00437415/2022

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

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text: not provided

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text: not provided

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text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/D-NVRL-S22IRL00437098/2022

characteristic: title


characteristic: ENA-CHECKLIST

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text: Irish Consortium for Sequencing Covid

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text: National Virus Reference Laboratory

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characteristic: common name

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text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00437625/2022


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

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text: human

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text: not provided

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text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/D-NVRL-S22IRL00437370/2022

characteristic: virus identifier