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characteristic: title


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text: Blood sample

text: China

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: Homo sapiens

text: HC_Blood_RNAseq sample ID111


text: Brandeis University

text: public

tag: Namespace:Brandeis University

text: ArrayExpress

characteristic: broker name

text: sensory neuron

text: Protocols: Animals were collected and cells dissociated essentially as described previously {Taylor, 2021}. In brief, animals were washed off plates with M9 buffer and incubated in lysis buffer (200 mM Dithiothreitol (DTT), 0.25% Sodium dodecyl sulfate (SDS), 20 mM HEPES buffer (4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid), 3% sucrose) for 5 mins. Lysed animals were washed 5X with egg buffer (118 mM NaCl, 48 mM KCl, 2 mM CaCl2, 2 mM MgCl2, 25 mM HEPES, pH 7.3) following which the worm pellet was resuspended in 750 μl of 15 mg/ml Pronase (Sigma P8811) in egg buffer. To promote dissociation, the mixture was pipetted frequently for 20 mins and progress of dissociation was monitored under a light microscope. Pronase digestion was terminated by adding L-15-10 media (L-15 media + 10% volume FBS, HI) at 4℃. Dissociated worms were centrifuged at 4℃ and the worm pellet was resuspended in egg buffer and recentrifuged at 4℃. The supernatant was filtered through a 35 µm filter in preparation for FACS sorting. A 25 μl aliquot of the dissociated worm pellet was pipetted directly into Trizol for analysis as the whole worm sample. Prior to performing FACS, 0.5 μl of 1 mg/ml DAPI was added to 1 ml of the cell suspension to exclude dead cells. AWA neurons were captured by isolating the high GFP+ and low DAPI compartment and cells were sorted directly into Trizol. To obtain control animals, adult hermaphrodites expressing the stably integrated transgene gpa-4Δ6p::myrGFP (PY10421) were bleached, and eggs allowed to hatch in M9 with 0.1% Triton-100. 50,000-100,000 growth-synchronized L1 larvae were plated onto 15 cm 8P growth plates seeded with 1 ml of an overnight culture of E. coli NA22 grown in 2XYT media. L1 larvae were allowed to grow for 40-48 hrs at 20℃ to obtain populations of L4 larvae. To obtain post-dauer animals, SDS-selected dauer larvae were plated onto 15 cm 8P plates seeded with 1 ml of an overnight culture of E. coli NA22 grown in 2XYT media, and allowed to recover to the L4 stage for 20-24 hrs at 20℃. RNA was extracted from collection tubes using standard chloroform and isopropanol precipitation. The RNA pellet was resuspended in RNase-free water and any DNA digested using the RNase-Free DNase kit (Qiagen). RNA was eluted using the RNeasy MinElute Cleanup Kit (Qiagen). mRNA was isolated and libraries amplified using Smart-Seq v4 and library quality checked with Bioanalyzer using Agilent High Sensitivity Gel. Libraries were sequenced on Illumina NextSeq500. Library preparation and sequencing was performed at the MIT BioMicro Center (https://biology.mit.edu/tile/biomicro-center/).

text: L4 larva

characteristic: developmental stage

characteristic: genotype

text: control

characteristic: growth condition

text: Caenorhabditis elegans

characteristic: organism

text: Caenorhabditis elegans

text: AWA neuron

characteristic: organism part

text: Caenorhabditis elegans

text: hermaphrodite

characteristic: sex

text: control

characteristic: stimulus

characteristic: strain

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Brandeis University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: mixed

text: L4 larva

text: control

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: whole organism

text: Caenorhabditis elegans

text: hermaphrodite

text: control


text: Brandeis University

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: sensory neuron

characteristic: cell type

characteristic: description

text: L4 larva

characteristic: developmental stage

text: Post-dauer

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: AWA neuron

text: Caenorhabditis elegans

text: hermaphrodite

text: Dauer recovery


text: Brandeis University

text: public

text: ArrayExpress

text: mixed

text: L4 larva

characteristic: genotype

text: Post-dauer

characteristic: growth condition

text: Caenorhabditis elegans

characteristic: organism

text: Caenorhabditis elegans

text: whole organism

characteristic: organism part

text: Caenorhabditis elegans

text: hermaphrodite

characteristic: sex

text: Dauer recovery

characteristic: stimulus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Walter and Eliza Hall Institute

text: public

text: ena-SAMPLE-TAB-16-06-2022-06:03:25:535-1877

tag: Namespace:Walter and Eliza Hall Institute

text: malaria parasite P. falciparum

characteristic: common name

text: parasite line with two mutations (T418N and P990R) that are not present in its parental Dd2 strain

text: Plasmodium falciparum

text: Plasmodium falciparum

characteristic: title


text: Walter and Eliza Hall Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-16-06-2022-06:03:25:535-1878

characteristic: Submitter Id

text: malaria parasite P. falciparum

text: highly-cipargamin-resistant (HCR) clone 1

text: Plasmodium falciparum

text: Plasmodium falciparum


text: Walter and Eliza Hall Institute

text: public

text: ena-SAMPLE-TAB-16-06-2022-06:03:25:535-1879

text: malaria parasite P. falciparum

text: highly-cipargamin-resistant (HCR) clone 2

characteristic: description

text: Plasmodium falciparum

text: Plasmodium falciparum


text: CNRS UMR 5288

text: public

tag: Namespace:CNRS UMR 5288

text: Modern donkey specimen sampled from Algeria

text: Equus asinus asinus

characteristic: organism

text: Equus asinus asinus

text: donkey specimen ALG_01


text: CNRS UMR 5288

text: public

text: Modern donkey specimen sampled from Ethiopia

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen ETH_14B


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen ETH_5B


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen ETH_6B


text: CNRS UMR 5288

text: public

text: Modern donkey specimen sampled from Ghana

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen GHA_01


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen GHA_07


text: CNRS UMR 5288

text: public

text: Modern donkey specimen sampled from Kazakhstan

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen KAZ_04


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen KAZ_07


text: CNRS UMR 5288

text: public

text: Modern donkey specimen sampled from Kyrgyzstan

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen KYR_16


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen KYR_31


text: CNRS UMR 5288

text: public

text: Modern donkey specimen sampled from Mongolia

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen MON_08


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen MON_10


text: CNRS UMR 5288

text: public

text: Modern donkey specimen sampled from Oman

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen OMA_38


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen OMA_39


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen OMA_46


text: CNRS UMR 5288

text: public

text: Modern donkey specimen sampled from Portugal

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen PTGm_02


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen PTGm_10


text: CNRS UMR 5288

text: public

text: Modern donkey specimen sampled from Saudi Arabia

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen SAU_11


text: CNRS UMR 5288

text: public

text: Modern donkey specimen sampled from Senegal

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen SEN_10


text: CNRS UMR 5288

text: public

text: Modern donkey specimen sampled from Somalia

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen SOM_01


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen SOM_05


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen SOM_19


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen SOM_20


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen SOM_21


text: CNRS UMR 5288

text: public

text: Modern donkey specimen sampled from Sudan

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen SUD_20


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen SUD_49


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen SUD_55


text: CNRS UMR 5288

text: public

text: Modern donkey specimen sampled from Syria

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen SYR_06


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen SYR_19


text: CNRS UMR 5288

text: public

text: Modern donkey specimen sampled from Turkmenistan

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen TKM_107


text: CNRS UMR 5288

text: public

text: Modern donkey specimen sampled from T�rkiye

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen TUK_07


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen TUK_08


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen TUK_26


text: CNRS UMR 5288

text: public

text: Modern donkey specimen sampled from Tunisia

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen TUN_06


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen TUN_11


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen TUN_19


text: CNRS UMR 5288

text: public

text: Modern donkey specimen sampled from Brazil

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen BRA_PegaDonkey


text: CNRS UMR 5288

text: public

text: Modern donkey specimen sampled from Yemen

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen YEM_08


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen YEM_11


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen YEM_17


text: CNRS UMR 5288

text: public

text: Modern donkey specimen sampled from Croatia

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen YUC_08


text: CNRS UMR 5288

text: public

text: Modern donkey specimen sampled from North Macedonia

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen YUM_08


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen YUM_13


text: CNRS UMR 5288

text: public

text: Modern donkey specimen sampled from Mauritania

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen MAU_3261


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen MAU_3094


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen MAU_2990


text: CNRS UMR 5288

text: public

text: Modern donkey specimen sampled from Egypt

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen EGY_02


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen EGY_14


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: donkey specimen EGY_17


text: CNRS UMR 5288

text: public

text: Subfossil donkey specimen excavated from Acemh�y�k (T�rkiye), radiocarbon dated to 3945�20 BP

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen AC14380


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen AC14415


text: CNRS UMR 5288

text: public

text: Subfossil donkey specimen excavated from Acemh�y�k (T�rkiye), radiocarbon dated to 3784�41 BP

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen MV051


text: CNRS UMR 5288

text: public

text: Subfossil donkey specimen excavated from Chalow (Iran), from BMAC context, 2200BCE-1900BCE

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen Chalow3


DoshanTepe

text: CNRS UMR 5288

text: public

text: DoshanTepe

text: Subfossil donkey specimen excavated from Doshan Tepe (Iran), radiocarbon dated to 2840�15 BP

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen DoshanTepe


text: CNRS UMR 5288

text: public

text: Subfossil donkey specimen excavated from Tarquinia (Italy), radiocarbon dated to 2445�20 BP

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen Tarquinia214


text: CNRS UMR 5288

text: public

text: Subfossil donkey specimen excavated from Tarquinia (Italy), radiocarbon dated to 2515�20 and 2565�20 BP

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen Tarquinia501


text: CNRS UMR 5288

text: public

text: Subfossil donkey specimen excavated from Nizzana (Israel), radiocarbon dated to 2150�20 BP

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen MV242


text: CNRS UMR 5288

text: public

text: Subfossil donkey specimen excavated from Shahr-i-Qumis (Iran), from 800BCE-800CE

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen AM39


text: CNRS UMR 5288

text: public

text: Subfossil donkey specimen excavated from Shahr-i-Qumis (Iran), archaeological context 800BCE-800CE

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen AM44


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen AM66


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen AM71


text: CNRS UMR 5288

text: public

text: Subfossil donkey specimen excavated from Shahr-i-Qumis (Iran), dated to 1615�20 and 1585�15 BP

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen AM805


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen AM89


BourseB

text: CNRS UMR 5288

text: public

text: BourseB

text: Subfossil donkey specimen excavated from Marseille (France), from Late Antiquity context, 0CE-500CE

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen BourseB


BourseC

text: CNRS UMR 5288

text: public

text: BourseC

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen BourseC


text: CNRS UMR 5288

text: public

text: Subfossil donkey specimen excavated from Boinville-en-Wo�vre (France), from Roman context, 200CE-500CE

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen GVA125


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen GVA347


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen GVA348


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen GVA349


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen GVA353


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen GVA354


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen GVA355


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen GVA358


text: CNRS UMR 5288

text: public

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen GVA359


text: CNRS UMR 5288

text: public

text: Subfossil donkey specimen excavated from Yenikapi (T�rkiye), radiocarbon dated to 1485�20 BP

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen Tur168


text: CNRS UMR 5288

text: public

text: Subfossil donkey specimen excavated from Yenikapi (T�rkiye), radiocarbon dated to 1125�15 BP

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen Tur177


text: CNRS UMR 5288

text: public

text: Subfossil donkey specimen excavated from Yenikapi (T�rkiye), radiocarbon dated to 1140�20 BP

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen Tur179


text: CNRS UMR 5288

text: public

text: Subfossil donkey specimen excavated from Yenikapi (T�rkiye), radiocarbon dated to 1295�15 BP

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen Tur277


text: CNRS UMR 5288

text: public

text: Subfossil donkey specimen excavated from Albufeira (Portugal), radiocarbon dated to 765�15 BP

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen Albufeira1x1


text: CNRS UMR 5288

text: public

text: Subfossil donkey specimen excavated from Fiumarella (Italy), radiocarbon dated to 165�25 BP

text: Equus asinus asinus

text: Equus asinus asinus

text: subfossil donkey specimen Fiumarella1


text: Walter and Eliza Hall Institute

text: public

text: ena-SAMPLE-TAB-17-06-2022-02:55:21:581-550

text: malaria parasite P. falciparum

text: Dd2 parent line of Dd2-PfATP4 (T418N,P990R)

text: Plasmodium falciparum

text: Plasmodium falciparum


text: WELLCOME SANGER INSTITUTE

text: public

tag: Namespace:WELLCOME SANGER INSTITUTE

text: This project collects an assembly and annotation generated for the parasitic blood fluke, Schistosoma turkestanicum (tdSchTurk1). The assembly was produced using PacBio long-reads, 10x Chromium linked-reads and Arima Hi-C reads. The annotation was produced from a combination of short-read (RNA-Seq), long-read (Iso-Seq) transcriptomic data, homology with existing gene predictions and de novo gene prediction.�

text: Adult

characteristic: dev stage

text: Hungary

characteristic: geographic location (country and/or sea)

text: Schistosoma turkestanicum

text: Schistosoma turkestanicum

text: Schistosoma turkestanicum assembly version 1 (tdSchTurk1.1)


text: WELLCOME SANGER INSTITUTE

text: public

text: This project collects an assembly and annotation generated for the parasitic blood fluke, Schistosoma spindale (tdSchSpin1). The assembly was produced using PacBio long-reads, 10x Chromium linked-reads and Arima Hi-C reads. The annotation was produced from a combination of short-read (RNA-Seq), long-read (Iso-Seq) transcriptomic data, homology with existing gene predictions and de novo gene prediction.�

text: Adult

text: Sri Lanka

text: Schistosoma spindale

text: Schistosoma spindale

text: Schistosoma spindale assembly version 1 (tdSchSpin1.1)


text: WELLCOME SANGER INSTITUTE

text: public

text: This project collects an assembly and annotation generated for the parasitic blood fluke, Schistosoma rodhaini (tdSchRodh1). The assembly was produced using PacBio long-reads, 10x Chromium linked-reads and Arima Hi-C reads. The annotation was produced from a combination of short-read (RNA-Seq), long-read (Iso-Seq) transcriptomic data, homology with existing gene predictions and de novo gene prediction.�

text: Adult

text: Burundi

text: Schistosoma rodhaini

text: Schistosoma rodhaini

text: Schistosoma rodhaini assembly version 1 (tdSchRodh1.1)


text: WELLCOME SANGER INSTITUTE

text: public

text: This project collects an assembly and annotation generated for the parasitic blood fluke, Schistosoma mattheei (tdSchMatt1). The assembly was produced using PacBio long-reads, 10x Chromium linked-reads and Arima Hi-C reads. The annotation was produced from a combination of short-read (RNA-Seq), long-read (Iso-Seq) transcriptomic data, homology with existing gene predictions and de novo gene prediction.�

text: Adult

text: Zambia

text: Schistosoma mattheei

text: Schistosoma mattheei

text: Schistosoma mattheei assembly version 1 (tdSchMatt1.1)


text: WELLCOME SANGER INSTITUTE

text: public

text: This project collects an assembly and annotation generated for the parasitic blood fluke, Schistosoma margrebowiei (tdSchMarg1). The assembly was produced using PacBio long-reads, 10x Chromium linked-reads and Arima Hi-C reads. The annotation was produced from a combination of short-read (RNA-Seq), long-read (Iso-Seq) transcriptomic data, homology with existing gene predictions and de novo gene prediction.�

text: Adult

text: Zambia

text: Schistosoma margrebowiei

text: Schistosoma margrebowiei

text: Schistosoma margrebowiei assembly version 1 (tdSchMarg1.1)


text: WELLCOME SANGER INSTITUTE

text: public

text: This project collects an assembly and annotation generated for the parasitic blood fluke, Schistosoma intercalatum (tdSchInte1). The assembly was produced using PacBio long-reads, 10x Chromium linked-reads and Arima Hi-C reads. The annotation was produced from a combination of short-read (RNA-Seq), long-read (Iso-Seq) transcriptomic data, homology with existing gene predictions and de novo gene prediction.�

text: Adult

text: Democratic Republic of the Congo

text: Schistosoma intercalatum

text: Schistosoma intercalatum

text: Schistosoma intercalatum assembly version 1 (tdSchInte1.1)


text: WELLCOME SANGER INSTITUTE

text: public

text: This project collects an assembly and annotation generated for the parasitic blood fluke, Schistosoma intercalatum (tdSchInte2). The assembly was produced using PacBio long-reads, 10x Chromium linked-reads and Arima Hi-C reads. The annotation was produced from a combination of short-read (RNA-Seq), long-read (Iso-Seq) transcriptomic data, homology with existing gene predictions and de novo gene prediction.�

text: Adult

text: Democratic Republic of the Congo

text: Schistosoma intercalatum

text: Schistosoma intercalatum

text: Schistosoma intercalatum assembly version 1 (tdSchInte2.1)


text: WELLCOME SANGER INSTITUTE

text: public

text: This project collects an assembly and annotation generated for the parasitic blood fluke, Schistosoma haematobium (tdSchHaem1). The assembly was produced using PacBio long-reads, 10x Chromium linked-reads and Arima Hi-C reads. The annotation was produced from a combination of short-read (RNA-Seq), long-read (Iso-Seq) transcriptomic data, homology with existing gene predictions and de novo gene prediction.�

text: Adult

text: Egypt

text: Schistosoma haematobium

text: Schistosoma haematobium

text: Schistosoma haematobium assembly version 1 (tdSchHaem1.1)


text: WELLCOME SANGER INSTITUTE

text: public

text: This project collects an assembly and annotation generated for the parasitic blood fluke, Schistosoma guineensis (tdSchGuin1). The assembly was produced using PacBio long-reads, 10x Chromium linked-reads and Arima Hi-C reads. The annotation was produced from a combination of short-read (RNA-Seq), long-read (Iso-Seq) transcriptomic data, homology with existing gene predictions and de novo gene prediction.�

text: Adult

text: Sao Tome and Principe

text: Schistosoma guineensis

text: Schistosoma guineensis

text: Schistosoma guineensis assembly version 1 (tdSchGuin1.1)


text: WELLCOME SANGER INSTITUTE

text: public

text: This project collects an assembly and annotation generated for the parasitic blood fluke, Schistosoma bovis (tdSchBovi2.1). The assembly was produced using PacBio long-reads, 10x Chromium linked-reads and Arima Hi-C reads. The annotation was produced from a combination of short-read (RNA-Seq), long-read (Iso-Seq) transcriptomic data, homology with existing gene predictions and de novo gene prediction.�

text: Adult

text: Kenya

text: Schistosoma bovis

text: Schistosoma bovis

text: Schistosoma bovis assembly version 1 (tdSchBovi2.1)


text: WELLCOME SANGER INSTITUTE

text: public

text: This project collects an assembly and annotation generated for the parasitic trematode, Heterobilharzia americana (tdHetHame1). The assembly was produced using PacBio long-reads, 10x Chromium linked-reads and Arima Hi-C reads. The annotation was produced from a combination of short-read (RNA-Seq), long-read (Iso-Seq) transcriptomic data, homology with existing gene predictions and de novo gene prediction.�

text: Adult

text: USA

text: Heterobilharzia americana

text: Heterobilharzia americana

text: Heterobilharzia americana assembly version 1 (tdHetHame1.1)


text: WELLCOME SANGER INSTITUTE

text: public

text: This project collects an assembly and annotation generated for the parasitic trematode, Heterobilharzia americana (tdHetHame2). The assembly was produced using PacBio long-reads, 10x Chromium linked-reads and Arima Hi-C reads. The annotation was produced from a combination of short-read (RNA-Seq), long-read (Iso-Seq) transcriptomic data, homology with existing gene predictions and de novo gene prediction.�

text: Adult

text: USA

text: Heterobilharzia americana

text: Heterobilharzia americana

text: Heterobilharzia americana assembly version 1 (tdHetHame2.1)


text: WELLCOME SANGER INSTITUTE

text: public

text: This project collects an assembly and annotation generated for the parasitic trematode, Trichobilharzia regenti (tdTriRege1). The assembly was produced using PacBio long-reads, 10x Chromium linked-reads and Arima Hi-C reads. The annotation was produced from a combination of short-read (RNA-Seq), long-read (Iso-Seq) transcriptomic data, homology with existing gene predictions and de novo gene prediction.�

text: Cercariae

text: Czech Republic

text: Trichobilharzia regenti

text: Trichobilharzia regenti

text: Trichobilharzia regenti assembly version 1 (tdTriRege1.1)


text: WELLCOME SANGER INSTITUTE

text: public

text: This project collects an assembly and annotation generated for the parasitic trematode, Trichobilharzia szidati (tdTriSzid1). The assembly was produced using PacBio long-reads, 10x Chromium linked-reads and Arima Hi-C reads. The annotation was produced from a combination of short-read (RNA-Seq), long-read (Iso-Seq) transcriptomic data, homology with existing gene predictions and de novo gene prediction.�

text: Cercariae

text: Czech Republic

text: Trichobilharzia szidati

text: Trichobilharzia szidati

text: Trichobilharzia szidati assembly version 1 (tdTriSzid1.1)


text: WELLCOME SANGER INSTITUTE

text: public

text: This project collects an assembly and annotation generated for the parasitic blood fluke, Schistosoma haematobium (tdSchHaem2). The assembly was produced using PacBio long-reads, 10x Chromium linked-reads and Arima Hi-C reads. The annotation was produced from a combination of short-read (RNA-Seq), long-read (Iso-Seq) transcriptomic data, homology with existing gene predictions and de novo gene prediction.�

text: Adult

text: Tanzania

text: Schistosoma haematobium

text: Schistosoma haematobium

text: Schistosoma haematobium assembly version 1 (tdSchHaem2.1)


text: WELLCOME SANGER INSTITUTE

text: public

text: This project collects an assembly and annotation generated for the parasitic blood fluke, Schistosoma bovis (tdSchBovi1). The assembly was produced using PacBio long-reads, 10x Chromium linked-reads and Arima Hi-C reads. The annotation was produced from a combination of short-read (RNA-Seq), long-read (Iso-Seq) transcriptomic data, homology with existing gene predictions and de novo gene prediction.�

text: Adult

text: Spain

text: Schistosoma bovis

text: Schistosoma bovis

text: Schistosoma bovis assembly version 1 (tdSchBovi1.1)


text: WELLCOME SANGER INSTITUTE

text: public

text: This project collects an assembly and annotation generated for the parasitic trematode, Dicrocoelium dendriticum (tdDicDend1). The assembly was produced using PacBio long-reads, 10x Chromium linked-reads and Arima Hi-C reads. The annotation was produced from a combination of short-read (RNA-Seq), long-read (Iso-Seq) transcriptomic data, homology with existing gene predictions and de novo gene prediction.�

text: Adult

text: Iran

text: Dicrocoelium dendriticum

text: Dicrocoelium dendriticum

text: Dicrocoelium dendriticum assembly version 1 (tdDicDend1.1)


text: WELLCOME SANGER INSTITUTE

text: public

text: This project collects an assembly and annotation generated for the parasitic blood fluke, Schistosoma rodhaini (tdSchRodh2). The assembly was produced using PacBio long-reads, 10x Chromium linked-reads and Arima Hi-C reads. The annotation was produced from a combination of short-read (RNA-Seq), long-read (Iso-Seq) transcriptomic data, homology with existing gene predictions and de novo gene prediction.�

text: Adult

text: Burundi

text: Schistosoma rodhaini

text: Schistosoma rodhaini

text: Schistosoma rodhaini assembly version 1 (tdSchRodh2.1)


text: WELLCOME SANGER INSTITUTE

text: public

text: This project collects an assembly and annotation generated for the parasitic blood fluke, Schistosoma curassoni (tdSchCurr1). The assembly was produced using PacBio long-reads and Arima Hi-C reads. The annotation was produced from a combination of short-read (RNA-Seq), long-read (Iso-Seq) transcriptomic data, homology with existing gene predictions and de novo gene prediction.

text: Adult

text: Senegal

text: Schistosoma curassoni

text: Schistosoma curassoni

text: Schistosoma curassoni assembly version 1 (tdSchCurr1)


text: public

tag: Namespace:Centre of New Technologies Univesristy of Warsaw

text: Common vole

text: Obłazowa 2

text: Poland

characteristic: geographic location (region and locality)

text: 49.42, 20.12

characteristic: lat lon

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Centre of New Technologies Univesristy of Warsaw

text: public

text: Common vole

text: Obłazowa (WE)

text: Poland

text: 49.42, 20.12

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Common vole

text: Geißenklösterle

text: Germany

text: 48.39, 9.772

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

characteristic: common name

text: Deszczowa

text: Poland

text: 50.58, 19.54

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Common vole

text: Obłazowa 2

text: Poland

text: 49.42, 20.12

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Common vole

text: Borsuka

text: Poland

text: 50.15, 19.70

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Common vole

text: Perlyna

text: Ukraine

text: 49.22, 26.18

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Jovelle Tour Blanche

characteristic: description

text: France

text: 45.36, 0.429

text: Microtus arvalis

characteristic: organism

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Roc-en-Pail

text: France

text: 47.03, -0.76

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Żarska

text: Poland

text: 49.87, 22.22

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: El Portalón

text: Spain

text: 42.36, -3.52

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Muráň 3

text: Slovakia

text: 49.25, 20.17

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Nový

text: Slovakia

text: 49.25, 20.17

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Šarkanica

text: Slovakia

text: 48.71, 19.96

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Trou Al’Wesse

text: Belgium

text: 50.43, 5.294

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Bridged Pot

text: UK

text: 50.97, -3.0

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Býčí

text: Czechia

text: 49.30, 16.69

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Peskö

text: Slovakia

text: 48.49, 20.34

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Coulet des Roches

text: France

text: 44.08, 5.399

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Skalice

text: Czechia

text: 49.90, 14.11

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Geißenklösterle

text: Germany

text: 48.39, 9.772

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Artazu VII

text: Spain

text: 43.07, -2.53

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Obłazowa (WE)

text: Poland

text: 49.42, 20.12

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Rock overhang in Cisowa Rock

text: Poland

text: 49.43, 20.10

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: El Miron

text: Spain

text: 43.24, -3.46

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Obłazowa 2

text: Poland

text: 49.42, 20.12

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Dzeravá skala

text: Slovakia

text: 48.49, 17.32

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Coulet Des Roches

text: France

text: 44.08, 5.399

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Bivak Cave

text: Hungary

text: 47.41, 18.50

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Riparo Tagliente

text: Italy

text: 45.54, 11.0

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Grotta del Sambuco

text: Italy

text: 43.03, 10.9

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Cudo

text: Spain

text: 41.28, 1.072

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: El Mirador

text: Spain

text: 42.36, -3.52

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: El Portalón

text: Spain

text: 42.36, -3.52

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Valdavara 1

text: Spain

text: 42.85, -7.16

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Hotilor cave

text: Romania

text: 44.86, 22.40

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Stoieni cave

text: Romania

text: 44.51, 22.90

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Muierilor cave

text: Romania

text: 45.19, 23.75

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Cave 16

text: Bulgaria

text: 43.17, 24.0

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Vrelska cave

text: Serbia

text: 43.21, 22.31

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Gradaśnica cave

text: Serbia

text: 44.46, 22.22

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Ljubićeva Pećina

text: Croatia

text: 44.97, 13.95

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Mujina Pećina

text: Croatia

text: 43.56, 16.24

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Romualdova Pećina

text: Croatia

text: 45.13, 13.65

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Geißenklösterle

text: Germany

text: 48.39, 9.772

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Rejtek III

text: Hungary

text: 48.0, 20.33

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: Býčí

text: Czechia

text: 49.30, 16.69

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: modern specimen

text: Poland

text: 54.44, 16.62

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: modern specimen

text: Poland

text: 53.53, 16.01

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: modern specimen

text: Poland

text: 52.91, 15.50

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: modern specimen

text: Poland

text: 52.81, 15.75

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: modern specimen

text: Czechia

text: 50.14, 12.39

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: modern specimen

text: Hungary

text: 47.68, 16.58

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: modern specimen

text: Poland

text: 47.16, 20.18

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: modern specimen

text: Serbia

text: 44.88, 21.32

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: modern specimen

text: Poland

text: 52.06, 19.56

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: modern specimen

text: Poland

text: 49.56, 22.56

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: modern specimen

text: Poland

text: 53.81, 21.64

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: modern specimen

text: Poland

text: 52.33, 16.47

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: modern specimen

text: Serbia

text: 43.01, 22.77

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: modern specimen

text: Serbia

text: 43.57, 22.25

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: modern specimen

text: Spain

text: 42.15, -4.69

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: modern specimen

text: Spain

text: 42.87, -4.35

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: modern specimen

text: Spain

text: 42.88, -4.50

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: modern specimen

text: Spain

text: 41.08, -4.99

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: modern specimen

text: Spain

text: 40.93, -5.31

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: modern specimen

text: Spain

text: 41.33, -4.39

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: modern specimen

text: Spain

text: 41.41, -4.30

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: modern specimen

text: Spain

text: 42.45, -3.02

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

text: Common vole

text: modern specimen

text: Spain

text: 40.69, -5.60

text: Microtus arvalis

text: Microtus arvalis

text: Microtus arvalis


text: public

tag: Namespace:Genome Engineering and Maintenance Network (CenGEM), College of Health, Medicine and Life Sciences, Division of Biosciences, Brunel University London

text: ArrayExpress

characteristic: broker name

characteristic: cell line

text: lymphoblast

characteristic: cell type

text: human

text: Protocols: 1x10^6 cultured cells were pelleted by centrifugation at 400 g for 5 min. Pelleted cells were used for extraction. Total RNA was extracted using Monarch Total RNA Miniprep Kit according to manufacturer's instructions (New England Biolabs, Hitchin, UK) Library construction was performed by Macrogen Europe BV (Amsterdam, Netherlands). A minimum of 1 μg (20 ng/μl) of high-quality total RNA (extracted using Monarch Total RNA Miniprep Kit, NEB) was supplied for sequencing. Macrogen Europe BV constructed libraries using Illumina Truseq Stranded Total RNA library preparation with Ribozero rRNA depletion.

text: adult

characteristic: developmental stage

text: chronic myelogenous leukemia

characteristic: disease

text: wild type genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: bone marrow cell

characteristic: organism part

text: Homo sapiens


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Genome Engineering and Maintenance Network (CenGEM), College of Health, Medicine and Life Sciences, Division of Biosciences, Brunel University London

text: public

text: ArrayExpress

text: lymphoblast

text: human

characteristic: common name

text: adult

text: chronic myelogenous leukemia

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: bone marrow cell

text: Homo sapiens


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: lymphoblast

text: human

text: adult

text: chronic myelogenous leukemia

text: CRSPR/Cas9 generated t(7;12)(q36;p13)

text: Homo sapiens

text: Homo sapiens

text: bone marrow cell

text: Homo sapiens

characteristic: title


text: uc davis

text: public

characteristic: SRA accession

tag: Namespace:uc davis

characteristic: Submitter Id

text: One

characteristic: cohort

text: mouse gut metagenome

text: cecal

characteristic: location

text: mouse gut metagenome

characteristic: organism

text: Mus musculus

text: mouse gut metagenome

text: M

characteristic: sex

text: 16S rRNA

characteristic: target gene

text: V4 region

characteristic: target subfragment

characteristic: time

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: uc davis

text: public

text: One

text: mouse gut metagenome

text: cecal

text: mouse gut metagenome

text: Mus musculus

text: mouse gut metagenome

text: F

text: 16S rRNA

text: V4 region


text: uc davis

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Two

text: mouse gut metagenome

characteristic: common name

text: cecal

text: mouse gut metagenome

text: Mus musculus

text: mouse gut metagenome

text: M

text: 16S rRNA

text: V4 region


text: uc davis

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Two

text: mouse gut metagenome

text: cecal

text: mouse gut metagenome

text: Mus musculus

text: mouse gut metagenome

text: F

text: 16S rRNA

text: V4 region

characteristic: title


text: uc davis

text: public

text: Three

characteristic: cohort

text: mouse gut metagenome

text: cecal

characteristic: location

text: mouse gut metagenome

characteristic: organism

text: Mus musculus

text: mouse gut metagenome

text: M

characteristic: sex

text: 16S rRNA

text: V4 region


text: uc davis

text: public

text: Three

text: mouse gut metagenome

text: cecal

text: mouse gut metagenome

text: Mus musculus

text: mouse gut metagenome

text: F

text: 16S rRNA

characteristic: target gene

text: V4 region

characteristic: target subfragment

characteristic: time

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: uc davis

text: public

text: mouse gut metagenome

text: cecal

text: mouse gut metagenome

text: Mus musculus

text: mouse gut metagenome

text: 16S rRNA

text: V4 region


text: uc davis

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: mouse gut metagenome

characteristic: common name

text: cecal

text: mouse gut metagenome

text: Mus musculus

text: mouse gut metagenome

text: 16S rRNA

text: V4 region

text: mock


text: uc davis

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: mouse gut metagenome

text: fecal

text: mouse gut metagenome

text: Mus musculus

text: mouse gut metagenome

text: M

text: 16S rRNA

text: V4 region

characteristic: title


text: uc davis

text: public

characteristic: cohort

text: mouse gut metagenome

text: fecal

characteristic: location

text: mouse gut metagenome

characteristic: organism

text: Mus musculus

text: mouse gut metagenome

text: F

characteristic: sex

text: 16S rRNA

text: V4 region


text: uc davis

text: public

text: mouse gut metagenome

text: fecal

text: mouse gut metagenome

text: Mus musculus

text: mouse gut metagenome

text: 16S rRNA

characteristic: target gene

text: V4 region

characteristic: target subfragment

text: mock

characteristic: time

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: uc davis

text: public

text: mouse gut metagenome

text: fecal

text: mouse gut metagenome

text: Mus musculus

text: mouse gut metagenome

text: 16S rRNA

text: V4 region

text: Neg


text: uc davis

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: mouse gut metagenome

characteristic: common name

text: fecal

text: mouse gut metagenome

text: Mus musculus

text: mouse gut metagenome

text: M

text: 16S rRNA

text: V4 region

text: Yog


text: uc davis

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: mouse gut metagenome

text: fecal

text: mouse gut metagenome

text: Mus musculus

text: mouse gut metagenome

text: M

text: 16S rRNA

text: V4 region

characteristic: title

text: Powder


text: uc davis

text: public

characteristic: cohort

text: mouse gut metagenome

text: fecal

characteristic: location

text: mouse gut metagenome

characteristic: organism

text: Mus musculus

text: mouse gut metagenome

text: F

characteristic: sex

text: 16S rRNA

text: V4 region

text: Yog


text: uc davis

text: public

text: mouse gut metagenome

text: fecal

text: mouse gut metagenome

text: Mus musculus

text: mouse gut metagenome

text: F

text: 16S rRNA

characteristic: target gene

text: V4 region

characteristic: target subfragment

characteristic: time

text: Powder

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: uc davis

text: public

text: negative

text: mouse gut metagenome

text: fecal

text: mouse gut metagenome

text: Mus musculus

text: mouse gut metagenome

text: negative

text: 16S rRNA

text: V4 region

text: negative


text: uc davis

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: fecal-10-sample-MockCommunitymetagenomics1

text: mock

text: mouse gut metagenome

characteristic: common name

text: fecal

text: mouse gut metagenome

text: Mus musculus

text: mouse gut metagenome

text: mock

text: 16S rRNA

text: V4 region

text: mock


text: uc davis

text: public

characteristic: INSDC status

characteristic: SRA accession

text: fecal-10-sample-MockCommunitymetagenomics2

characteristic: Submitter Id

text: mock

text: mouse gut metagenome

text: fecal

text: mouse gut metagenome

text: Mus musculus

text: mouse gut metagenome

text: mock

text: 16S rRNA

text: V4 region

characteristic: title

text: mock


text: uc davis

text: public

text: fecal-10-sample-MockCommunitymetagenomics3

text: mock

characteristic: cohort

text: mouse gut metagenome

text: fecal

characteristic: location

text: mouse gut metagenome

characteristic: organism

text: Mus musculus

text: mouse gut metagenome

text: mock

characteristic: sex

text: 16S rRNA

text: V4 region

text: mock


text: University College London

text: public

tag: Namespace:University College London

text: 1/4 MIC RIF and 1/4 MIC INH, end of evolution cycle 2, replicate 1

characteristic: description

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote

characteristic: serovar

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University College London

text: public

text: 1/4 MIC RIF and 0 MIC INH, end of evolution cycle 2, replicate 1

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


characteristic: External Id

text: University College London

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 0 MIC RIF and 1/4 MIC INH, end of evolution cycle 2, replicate 1

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: 0 MIC RIF and 0 MIC INH, end of evolution cycle 2, replicate 1

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: 0 MIC RIF and 1 MIC INH, end of evolution cycle 2, replicate 1

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: 0 MIC RIF and 8 MIC INH, end of evolution cycle 2, replicate 1

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote

characteristic: title


text: University College London

text: public

text: 1 MIC RIF and 0 MIC INH, end of evolution cycle 2, replicate 1

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: 1 MIC RIF and 1 MIC INH, end of evolution cycle 2, replicate 1

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: 8 MIC RIF and 0 MIC INH, end of evolution cycle 2, replicate 1

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: 8 MIC RIF and 8 MIC INH, end of evolution cycle 2, replicate 1

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: Start culture, replicate 1

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: 1/4 MIC RIF and 1/4 MIC INH, end of evolution cycle 2, replicate 2

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: 1/4 MIC RIF and 0 MIC INH, end of evolution cycle 2, replicate 2

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: 0 MIC RIF and 1/4 MIC INH, end of evolution cycle 2, replicate 2

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: 0 MIC RIF and 0 MIC INH, end of evolution cycle 2, replicate 2

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: 0 MIC RIF and 1 MIC INH, end of evolution cycle 2, replicate 2

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: 0 MIC RIF and 8 MIC INH, end of evolution cycle 2, replicate 2

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: 1 MIC RIF and 0 MIC INH, end of evolution cycle 2, replicate 2

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: 1 MIC RIF and 1 MIC INH, end of evolution cycle 2, replicate 2

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: 8 MIC RIF and 0 MIC INH, end of evolution cycle 2, replicate 2

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: 8 MIC RIF and 8 MIC INH, end of evolution cycle 2, replicate 2

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: Start culture, replicate 2

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: 0 MIC RIF and 0 MIC INH, end of evolution cycle 1, replicate 2

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: 0 MIC RIF and 1/4 MIC INH, end of evolution cycle 1, replicate 2

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: 0 MIC RIF and 1/4 MIC INH, end of evolution cycle 1, replicate 1

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: 0 MIC RIF and 1 MIC INH, end of evolution cycle 1, replicate 2

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: 0 MIC RIF and 8 MIC INH, end of evolution cycle 1, replicate 1

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: 0 MIC RIF and 8 MIC INH, end of evolution cycle 1, replicate 2

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: 1/4 MIC RIF and 1/4 MIC INH, end of evolution cycle 1, replicate 2

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote


text: University College London

text: public

text: 1/4 MIC RIF and 1/4 MIC INH, end of evolution cycle 1, replicate 1

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote