characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-024__bin30


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT defaults, SemiBin defaults with rabbit_gut model, metaWRAP bin_refinement module

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339305

text: feces

text: France

unit: DD

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-024__bin45

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-024__bin50


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-024__bin61

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-024__bin66


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-024__bin89

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339306

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-025__bin53


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339307

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-026__bin107

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-026__bin67


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339308

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-027__bin2

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339310

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-030__bin22


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-030__bin24

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT defaults, SemiBin defaults with rabbit_gut model, metaWRAP bin_refinement module

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-030__bin27


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339312

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-032__bin10

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-032__bin107


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-032__bin118

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-032__bin126


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-032__bin2

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-032__bin86


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339313

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-033__bin51

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339293

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-012__bin2


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339285

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-002__bin65

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339287

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-004__bin7


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT defaults, SemiBin defaults with rabbit_gut model, metaWRAP bin_refinement module

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339288

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-005__bin73

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-012__bin45


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-012__bin87

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339296

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-015__bin24


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339304

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-023__bin100

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339312

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-032__bin128


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-032__bin130

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-032__bin16


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-032__bin20

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339284

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-001__bin17


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT defaults, SemiBin defaults with rabbit_gut model, metaWRAP bin_refinement module

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-001__bin62

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-001__bin83


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339302

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-021__bin6

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-032__bin29


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339288

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-005__bin19

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-005__bin28


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339307

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-026__bin27

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-001__bin9


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339286

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-003-2__bin46

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339306

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-025__bin16


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT defaults, SemiBin defaults with rabbit_gut model, metaWRAP bin_refinement module

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339293

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-012__bin53

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339284

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-001__bin22


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-001__bin50

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339285

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-002__bin1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-002__bin24

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-012__bin42


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339295

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-014__bin23

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339299

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-018__bin48


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339305

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-024__bin87

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT defaults, SemiBin defaults with rabbit_gut model, metaWRAP bin_refinement module

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339310

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-030__bin15


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-024__bin86

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-002__bin27


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339287

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-004__bin41

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-004__bin45


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-004__bin61

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339288

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-005__bin60


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-005__bin96

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339290

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-008__bin38


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-008__bin78

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339292

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-011__bin28


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT defaults, SemiBin defaults with rabbit_gut model, metaWRAP bin_refinement module

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339293

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-012__bin35

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339303

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-022__bin1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339304

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-023__bin41

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-023__bin46


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339306

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-025__bin4

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339308

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-027__bin36


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-027__bin73

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339310

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-030__bin48


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-030__bin96

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT defaults, SemiBin defaults with rabbit_gut model, metaWRAP bin_refinement module

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339312

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-032__bin69


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339285

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-002__bin66

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339288

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-005__bin102


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339290

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-008__bin23

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339295

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-014__bin47


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-014__bin9

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339298

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-017__bin20


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339299

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-018__bin38

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT defaults, SemiBin defaults with rabbit_gut model, metaWRAP bin_refinement module

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339302

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-021__bin12


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339305

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-024__bin88

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339308

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-027__bin86


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339310

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-030__bin21

characteristic: title