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text: restricted access

text: restricted access

text: hCoV-19/Liechtenstein/FL-Risch-1014R14036/2022

characteristic: isolate

characteristic: organism

text: active surveillance in response to outbreak

characteristic: title


characteristic: External Id

characteristic: GISAID Accession ID

text: Dr. Risch

characteristic: INSDC center name

text: public

text: SIB

text: Switzerland

text: TG

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/TG-Risch-1005R14075/2022

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Dr. Risch

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-Risch-1012R14018/2022


characteristic: External Id

characteristic: GISAID Accession ID

text: Dr. Risch

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: FR

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/FR-Risch-1014R14013/2022

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Dr. Risch

characteristic: INSDC first public

text: public

text: SIB

text: Switzerland

text: SZ

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/SZ-Risch-1005R14076/2022

characteristic: sample capture status


Candida parapsilosis NCYC 4289

characteristic: External Id

text: QIB

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Candida parapsilosis NCYC 4289

characteristic: Submitter Id

text: Quadram Institute Bioscience

characteristic: broker name

text: Candida parapsilosis NCYC 4289, a faecal-derived isolate from a young male infant born prematurely in the UK

characteristic: description

text: Candida parapsilosis

text: Candida parapsilosis

text: Candida parapsilosis NCYC 4289


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: STOCKHOLMS UNIVERSITET

text: public

tag: Namespace:STOCKHOLMS UNIVERSITET

characteristic: collection date

text: Sweden

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Galerucella calmariensis

characteristic: organism

text: Population genomics Galerucella beetles

characteristic: project name

text: Galerucella calmariensis

text: Illumina Novaseq 6000

characteristic: sequencing method

text: Galerucella calmariensis 1

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: STOCKHOLMS UNIVERSITET

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Sweden

text: Galerucella calmariensis

text: Population genomics Galerucella beetles

text: Galerucella calmariensis

text: Illumina Novaseq 6000

text: Galerucella calmariensis 2


text: STOCKHOLMS UNIVERSITET

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Sweden

text: Galerucella calmariensis

text: Population genomics Galerucella beetles

text: Galerucella calmariensis

text: Illumina Novaseq 6000

text: Galerucella calmariensis 3


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

text: Galerucella calmariensis

text: Population genomics Galerucella beetles

text: Galerucella calmariensis

text: Illumina Novaseq 6000

text: Galerucella calmariensis 4


text: STOCKHOLMS UNIVERSITET

text: public

characteristic: collection date

text: Sweden

characteristic: geographic location (country and/or sea)

text: Galerucella calmariensis

text: Population genomics Galerucella beetles

text: Galerucella calmariensis

text: Illumina Novaseq 6000

text: Galerucella calmariensis 5


text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Galerucella calmariensis

text: Population genomics Galerucella beetles

text: Galerucella calmariensis

text: Illumina Novaseq 6000

text: Galerucella calmariensis 6


text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

text: Galerucella calmariensis

characteristic: organism

text: Population genomics Galerucella beetles

characteristic: project name

text: Galerucella calmariensis

text: Illumina Novaseq 6000

text: Galerucella calmariensis 7


text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

text: Galerucella calmariensis

text: Population genomics Galerucella beetles

text: Galerucella calmariensis

text: Illumina Novaseq 6000

characteristic: sequencing method

text: Galerucella calmariensis 8

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

text: Galerucella calmariensis

text: Population genomics Galerucella beetles

text: Galerucella calmariensis

text: Illumina Novaseq 6000

text: Galerucella calmariensis 9


text: STOCKHOLMS UNIVERSITET

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Sweden

text: Galerucella calmariensis

text: Population genomics Galerucella beetles

text: Galerucella calmariensis

text: Illumina Novaseq 6000

text: Galerucella calmariensis 11


text: STOCKHOLMS UNIVERSITET

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Sweden

text: Galerucella calmariensis

text: Population genomics Galerucella beetles

text: Galerucella calmariensis

text: Illumina Novaseq 6000

text: Galerucella calmariensis 12


text: STOCKHOLMS UNIVERSITET

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Sweden

text: Galerucella calmariensis

text: Population genomics Galerucella beetles

text: Galerucella calmariensis

text: Illumina Novaseq 6000

text: Galerucella calmariensis 13


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

text: Galerucella calmariensis

text: Population genomics Galerucella beetles

text: Galerucella calmariensis

text: Illumina Novaseq 6000

text: Galerucella calmariensis 14


text: STOCKHOLMS UNIVERSITET

text: public

characteristic: collection date

text: Sweden

characteristic: geographic location (country and/or sea)

text: Galerucella calmariensis

text: Population genomics Galerucella beetles

text: Galerucella calmariensis

text: Illumina Novaseq 6000

text: Galerucella calmariensis 15


text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Galerucella pusilla

text: Population genomics Galerucella beetles

text: Galerucella pusilla

text: Illumina Novaseq 6000

text: Galerucella pusilla 1


text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

text: Galerucella pusilla

characteristic: organism

text: Population genomics Galerucella beetles

characteristic: project name

text: Galerucella pusilla

text: Illumina Novaseq 6000

text: Galerucella pusilla 2


text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

text: Galerucella pusilla

text: Population genomics Galerucella beetles

text: Galerucella pusilla

text: Illumina Novaseq 6000

characteristic: sequencing method

text: Galerucella pusilla 3

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

text: Galerucella pusilla

text: Population genomics Galerucella beetles

text: Galerucella pusilla

text: Illumina Novaseq 6000

text: Galerucella pusilla 4


text: STOCKHOLMS UNIVERSITET

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Sweden

text: Galerucella pusilla

text: Population genomics Galerucella beetles

text: Galerucella pusilla

text: Illumina Novaseq 6000

text: Galerucella pusilla 5


text: STOCKHOLMS UNIVERSITET

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Sweden

text: Galerucella pusilla

text: Population genomics Galerucella beetles

text: Galerucella pusilla

text: Illumina Novaseq 6000

text: Galerucella pusilla 6


text: STOCKHOLMS UNIVERSITET

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Sweden

text: Galerucella pusilla

text: Population genomics Galerucella beetles

text: Galerucella pusilla

text: Illumina Novaseq 6000

text: Galerucella pusilla 7


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

text: Galerucella pusilla

text: Population genomics Galerucella beetles

text: Galerucella pusilla

text: Illumina Novaseq 6000

text: Galerucella pusilla 8


text: STOCKHOLMS UNIVERSITET

text: public

characteristic: collection date

text: Sweden

characteristic: geographic location (country and/or sea)

text: Galerucella pusilla

text: Population genomics Galerucella beetles

text: Galerucella pusilla

text: Illumina Novaseq 6000

text: Galerucella pusilla 9


text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Galerucella pusilla

text: Population genomics Galerucella beetles

text: Galerucella pusilla

text: Illumina Novaseq 6000

text: Galerucella pusilla 10


text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

text: Galerucella pusilla

characteristic: organism

text: Population genomics Galerucella beetles

characteristic: project name

text: Galerucella pusilla

text: Illumina Novaseq 6000

text: Galerucella pusilla 11


text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

text: Galerucella pusilla

text: Population genomics Galerucella beetles

text: Galerucella pusilla

text: Illumina Novaseq 6000

characteristic: sequencing method

text: Galerucella pusilla 12

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

text: Galerucella pusilla

text: Population genomics Galerucella beetles

text: Galerucella pusilla

text: Illumina Novaseq 6000

text: Galerucella pusilla 13


text: STOCKHOLMS UNIVERSITET

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Sweden

text: Galerucella pusilla

text: Population genomics Galerucella beetles

text: Galerucella pusilla

text: Illumina Novaseq 6000

text: Galerucella pusilla 14


text: STOCKHOLMS UNIVERSITET

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Sweden

text: Galerucella pusilla

text: Population genomics Galerucella beetles

text: Galerucella pusilla

text: Illumina Novaseq 6000

text: Galerucella pusilla 15


text: STOCKHOLMS UNIVERSITET

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Sweden

text: Galerucella tenella

text: Population genomics Galerucella beetles

text: Galerucella tenella

text: Illumina Novaseq 6000

text: Galerucella tenella 1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

text: Galerucella tenella

text: Population genomics Galerucella beetles

text: Galerucella tenella

text: Illumina Novaseq 6000

text: Galerucella tenella 2


text: STOCKHOLMS UNIVERSITET

text: public

characteristic: collection date

text: Sweden

characteristic: geographic location (country and/or sea)

text: Galerucella tenella

text: Population genomics Galerucella beetles

text: Galerucella tenella

text: Illumina Novaseq 6000

text: Galerucella tenella 3


text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Galerucella tenella

text: Population genomics Galerucella beetles

text: Galerucella tenella

text: Illumina Novaseq 6000

text: Galerucella tenella 4


text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

text: Galerucella tenella

characteristic: organism

text: Population genomics Galerucella beetles

characteristic: project name

text: Galerucella tenella

text: Illumina Novaseq 6000

text: Galerucella tenella 5


text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

text: Galerucella tenella

text: Population genomics Galerucella beetles

text: Galerucella tenella

text: Illumina Novaseq 6000

characteristic: sequencing method

text: Galerucella tenella 6

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

text: Galerucella tenella

text: Population genomics Galerucella beetles

text: Galerucella tenella

text: Illumina Novaseq 6000

text: Galerucella tenella 7


text: STOCKHOLMS UNIVERSITET

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Sweden

text: Galerucella tenella

text: Population genomics Galerucella beetles

text: Galerucella tenella

text: Illumina Novaseq 6000

text: Galerucella tenella 8


text: STOCKHOLMS UNIVERSITET

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Sweden

text: Galerucella tenella

text: Population genomics Galerucella beetles

text: Galerucella tenella

text: Illumina Novaseq 6000

text: Galerucella tenella 11


text: STOCKHOLMS UNIVERSITET

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Sweden

text: Galerucella tenella

text: Population genomics Galerucella beetles

text: Galerucella tenella

text: Illumina Novaseq 6000

text: Galerucella tenella 13


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

text: Galerucella tenella

text: Population genomics Galerucella beetles

text: Galerucella tenella

text: Illumina Novaseq 6000

text: Galerucella tenella 15


text: STOCKHOLMS UNIVERSITET

text: public

characteristic: collection date

text: Sweden

characteristic: geographic location (country and/or sea)

text: Galerucella tenella

text: Population genomics Galerucella beetles

text: Galerucella tenella

text: Illumina Novaseq 6000

text: Galerucella tenella 17


text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Galerucella tenella

text: Population genomics Galerucella beetles

text: Galerucella tenella

text: Illumina Novaseq 6000

text: Galerucella tenella 19


text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

text: Galerucella tenella

characteristic: organism

text: Population genomics Galerucella beetles

characteristic: project name

text: Galerucella tenella

text: Illumina Novaseq 6000

text: Galerucella tenella 21


text: STOCKHOLMS UNIVERSITET

text: public

text: Sweden

text: Galerucella tenella

text: Population genomics Galerucella beetles

text: Galerucella tenella

text: Illumina Novaseq 6000

characteristic: sequencing method

text: Galerucella tenella 23

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Shanghai Tenth People's Hospital

text: public

tag: Namespace:Shanghai Tenth People's Hospital

text: ArrayExpress

characteristic: broker name

text: Protocols: Cells were grown in YPD broth at 37˚C from OD600=0.01 till OD600=1.0.Pellets were obtained by centrifuging at maximum speed for 1min. the pellets were fast frozen in liquid nitrogen. RNA was extracted using the TRIzol method following the manufacturer's protocol. Cell pellets were transferred from liquid nitrogen into the 2ml tub containing 1.5ml Trizol reagent. The mix was shared for 3min, and kept for 5in at room temperature, then centrifuged at 10,000xg for 5min at 4˚C. The supernatant was added 200µl of chloroform/isoamyl alcohol (24:1) with 1ml lysis reagents. After centrifuged at 10,000g for 10min at 4˚C, the supernatant was transferred into another new tube with equal volume of isopropanol and put in the refrigerator at -20˚C for 1h. After centrifuged at 13600xg for 20min at 4˚C, the supernatant was precipitated by 1ml of 75% ethanol and let dry for 3-5min. The RNA pellet was dissolved with 30-100µl of DEPC water. The concentration of the extracted RNA was determined using a Nanodrop system (NanoDrop, Madison, USA), and the integrity of the RNA was examined by the RNA integrity number (RIN) using an Agilent 2100 bioanalyzer (Agilent, Santa Clara, USA) buffer at appropriate temperature. Then First-strand cDNA was generated using random hexamer-primed reverse transcription, followed by a second-strand cDNA synthesis. afterwards, A-Tailing Mix and RNA Index Adapters were added by incubating to end repair. The cDNA fragments obtained from previous step were amplified by PCR, and products were purified by Ampure XP Beads, then dissolved in EB solution. The product was validated on the Agilent Technologies 2100 bioanalyzer for quality control. The double stranded PCR products from previous step were heated denatured and circularized by the splint oligo sequence to get the final library. The single strand circle DNA (ssCir DNA) was formatted as the final library.

characteristic: description

text: wild type genotype

characteristic: genotype

text: Cryptococcus neoformans var. grubii H99

text: Cryptococcus neoformans var. grubii H99

text: Cryptococcus neoformans var. grubii H99


text: Shanghai Tenth People's Hospital

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: aneuploid

text: Cryptococcus neoformans var. grubii H99

text: Cryptococcus neoformans var. grubii H99

text: Cryptococcus neoformans var. grubii H99


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

tag: Namespace:Bioaraba Research Health Institute, Araba University Hospital,

characteristic: Submitter Id

text: human

characteristic: common name

text: Blood sample from healthy parents

text: yes

characteristic: germline

text: Homo sapiens

text: Homo sapiens

text: female

characteristic: sex


text: Bioaraba Research Health Institute, Araba University Hospital,

text: public

text: human

text: Blood sample from healthy parents

text: yes

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: male

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

tag: Namespace:Microbiology, Department of Cell and Molecular Biology (ICM), Uppsala University

text: Anopheles darlingi 3rd instar larva collected in Coari

text: Brazil

characteristic: geographic location (country and/or sea)

text: Amazon, Coari

characteristic: geographic location (region and locality)

text: -4.1125, -63.12866

text: Anopheles darlingi

text: Anopheles darlingi

text: Bacteria associated with Anopheles darlingi larvae


text: Microbiology, Department of Cell and Molecular Biology (ICM), Uppsala University

characteristic: INSDC center name

text: public

text: Anopheles darlingi 4th instar larva collected in Coari

characteristic: description

text: Brazil

text: Amazon, Coari

text: -4.1125, -63.12866

text: Anopheles darlingi

text: Anopheles darlingi


characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Anopheles darlingi breeding water collected in Coari

text: Brazil

text: Amazon, Coari

text: -4.1125, -63.12866

text: freshwater metagenome

text: freshwater metagenome

text: Bacteria associated with Anopheles darlingi breeding sites


text: public

characteristic: INSDC status

characteristic: SRA accession

text: Brazil

text: Amazon, Coari

text: -4.1125, -63.12866

text: Anopheles darlingi

text: Anopheles darlingi


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: Anopheles darlingi pupa collected in Coari

text: Brazil

text: Amazon, Coari

text: -4.1125, -63.12866

text: Anopheles darlingi

text: Anopheles darlingi

text: Bacteria associated with Anopheles darlingi pupae


text: public

characteristic: Submitter Id

text: Brazil

text: Amazon, Coari

text: -4.11548, -63.14288

text: freshwater metagenome

text: freshwater metagenome


text: public

text: Brazil

text: Amazon, Coari

text: -4.11548, -63.14288

text: Anopheles darlingi

text: Anopheles darlingi


text: public

text: Brazil

text: Amazon, Coari

text: -4.11548, -63.14288

text: Anopheles darlingi

text: Anopheles darlingi


text: public

text: Brazil

text: Amazon, Coari

text: -4.11548, -63.14288

text: Anopheles darlingi

text: Anopheles darlingi


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

unit: year

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status

text: hCoV-19/Ireland/CE-NVRL-S22IRL00443351/2022

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: active surveillance in response to outbreak

text: hCoV-19/Ireland/CE-NVRL-S22IRL00443350/2022

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/CE-NVRL-S22IRL00443352/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CE-NVRL-S22IRL00443345/2022

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

characteristic: host age

text: human

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text: Homo sapiens

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text: female

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text: Oro-Nasopharyngeal swab

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text: hCoV-19/Ireland/CE-NVRL-S22IRL00443343/2022

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

text: NVRL

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characteristic: SRA accession

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

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characteristic: organism

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text: hCoV-19/Ireland/CE-NVRL-S22IRL00444177/2022


text: NVRL

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characteristic: broker name

text: National Virus Reference Laboratory

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characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

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text: human

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characteristic: ENA-CHECKLIST

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text: National Virus Reference Laboratory

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text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

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text: not provided

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text: Homo sapiens

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characteristic: title


text: NVRL

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text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

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text: hCoV-19/Ireland/CE-NVRL-S22IRL00444601/2022


characteristic: ENA-CHECKLIST

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characteristic: External Id

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characteristic: SRA accession

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

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text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

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text: hCoV-19/Ireland/CE-NVRL-S22IRL00444641/2022

characteristic: virus identifier


text: NVRL

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text: Human coronavirus 2019

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text: Ireland

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characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

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text: Homo sapiens

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text: male

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characteristic: title


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: NVRL

characteristic: INSDC center name

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characteristic: INSDC last update

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characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

text: human

text: not provided

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text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CE-NVRL-S22IRL00441238/2022


text: NVRL

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text: National Virus Reference Laboratory

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text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

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characteristic: virus identifier


characteristic: ENA-CHECKLIST

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characteristic: SRA accession

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

text: human

text: not provided

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text: Homo sapiens

text: male

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text: hCoV-19/Ireland/CE-NVRL-S22IRL00441232/2022

characteristic: title


text: NVRL

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characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cavan

characteristic: host age

text: human

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text: Homo sapiens

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text: male

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text: not provided

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text: hCoV-19/Ireland/CN-NVRL-S22IRL00444200/2022


characteristic: ENA-CHECKLIST

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text: NVRL

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characteristic: SRA accession

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

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text: hCoV-19/Ireland/CN-NVRL-S22IRL00443204/2022

characteristic: virus identifier


text: NVRL

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text: Europe / Ireland / Cavan

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characteristic: title


characteristic: ENA-CHECKLIST

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text: National Virus Reference Laboratory

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text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

text: human

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text: Homo sapiens

text: male

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text: Oro-Nasopharyngeal swab

characteristic: organism

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text: hCoV-19/Ireland/CN-NVRL-S22IRL00444470/2022


text: NVRL

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text: National Virus Reference Laboratory

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text: Ireland

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text: Europe / Ireland / Cavan

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characteristic: virus identifier


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text: National Virus Reference Laboratory

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characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

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characteristic: organism

text: hCoV-19/Ireland/CN-NVRL-S22IRL00440736/2022

characteristic: title


text: NVRL

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text: Europe / Ireland / Cavan

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text: hCoV-19/Ireland/CN-NVRL-S22IRL00440593/2022


characteristic: ENA-CHECKLIST

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text: National Virus Reference Laboratory

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text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

text: human

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text: Homo sapiens

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text: hCoV-19/Ireland/CN-NVRL-S22IRL00440738/2022

characteristic: virus identifier


text: NVRL

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text: Ireland

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text: Europe / Ireland / Cavan

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text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00443208/2022


text: NVRL

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text: National Virus Reference Laboratory

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text: Human coronavirus 2019

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text: Ireland

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text: Europe / Ireland / Cork

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text: Homo sapiens

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text: hCoV-19/Ireland/CO-NVRL-S22IRL00443001/2022

characteristic: virus identifier