E-MTAB-12442:Sample 11

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 11

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: germ-free

text: dam GF-B / fetus 3

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: male

text: Sample 11

characteristic: title


E-MTAB-12442:Sample 12

status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 12

tag: Namespace:Faculty of Veterinary Medicine, University of Helsinki

text: embryonic 18.5

unit: day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: Protocols: The dams were euthanized 18.5 days post coitum by cervical dislocation. Whole brain, intestine and placenta were collected from two fetuses per dam, to a total of 12 fetuses per experimental group. The fetal organ samples were immediately frozen in liquid nitrogen, stored at − 80 °C and transferred on dry ice to the research laboratory. Six pregnant germ-free (GF) and six specific pathogen free (SPF) C57BL/6 J dams were obtained from the EMMA Axenic Service at Instituto Gulbenkian de Ciência, Portugal. The GF dams were 3-4 months old and the SPF dams 4-5 months old. The GF and SPF statuses were regularly monitored by culture and 16S qPCR. All dams were fed identical RM3-A-P (Rat and Mouse No.3 Breeding Autoclavable) breeding diets (SDS Special Diet Services, Essex, UK), autoclaved at 121 °C. The SPF feed was autoclaved for 20 min and the GF feed for 30 min due to logistical reasons. Total RNA was extracted from fetal intestine, brain and placenta (one female fetus and one male fetus per dam) using the Qiagen RNeasy Mini Kit (Qiagen, Germany). The tissues were mechanically lysed by grinding with a plastic pestle (Bel-Art, PA) attached to an electric drill, and the protocol included the optional on-column DNAse digestion. Dual-indexed mRNA libraries were prepared from 150 ng of total RNA with QuantSeq 3’ mRNA-Seq Library Prep Kit FWD (Lexogen Gmbh, Vienna, Austria) according to user guide version 015UG009V0251. During second strand synthesis, 6 bp Unique Molecular Identifiers (UMI) were introduced with UMI Second Strand Synthesis Module (Lexogen Gmbh, Vienna, Austria) for detection and removal of PCR duplicates. Quality of the libraries was measured with LabChip GX Touch HT DNA High Sensitivity Reagent Kit (PerkinElmer, Waltham, MA, USA).

text: embryo

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: germ-free

characteristic: growth condition

text: dam GF-B / fetus 3

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: placenta

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: Sample 12


E-MTAB-12442:Sample 13

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Faculty of Veterinary Medicine, University of Helsinki

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 13

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: germ-free

text: dam GF-C / fetus 1

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: male

text: Sample 13

characteristic: title


E-MTAB-12442:Sample 14

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 14

text: embryonic 18.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: germ-free

text: dam GF-C / fetus 1

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: male

text: Sample 14


E-MTAB-12442:Sample 15

text: public

text: E-MTAB-12442:Sample 15

text: embryonic 18.5

text: ArrayExpress

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: germ-free

characteristic: growth condition

text: dam GF-C / fetus 1

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: placenta

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: Sample 15


E-MTAB-12442:Sample 16

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 16

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: germ-free

text: dam GF-C / fetus 3

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: female

text: Sample 16

characteristic: title


E-MTAB-12442:Sample 17

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 17

text: embryonic 18.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: germ-free

text: dam GF-C / fetus 3

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: female

text: Sample 17


E-MTAB-12442:Sample 18

text: public

text: E-MTAB-12442:Sample 18

text: embryonic 18.5

text: ArrayExpress

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: germ-free

characteristic: growth condition

text: dam GF-C / fetus 3

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: placenta

characteristic: organism part

text: Mus musculus

text: female

characteristic: sex

characteristic: strain

text: Sample 18


E-MTAB-12442:Sample 19

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 19

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: germ-free

text: dam GF-D / fetus 1

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: female

text: Sample 19

characteristic: title


E-MTAB-12442:Sample 20

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 20

text: embryonic 18.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: germ-free

text: dam GF-D / fetus 1

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: female

text: Sample 20


E-MTAB-12442:Sample 21

text: public

text: E-MTAB-12442:Sample 21

text: embryonic 18.5

text: ArrayExpress

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: germ-free

characteristic: growth condition

text: dam GF-D / fetus 1

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: placenta

characteristic: organism part

text: Mus musculus

text: female

characteristic: sex

characteristic: strain

text: Sample 21


E-MTAB-12442:Sample 22

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 22

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: germ-free

text: dam GF-D / fetus 3

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: male

text: Sample 22

characteristic: title


E-MTAB-12442:Sample 23

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 23

text: embryonic 18.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: germ-free

text: dam GF-D / fetus 3

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: male

text: Sample 23


E-MTAB-12442:Sample 24

text: public

text: E-MTAB-12442:Sample 24

text: embryonic 18.5

text: ArrayExpress

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: germ-free

characteristic: growth condition

text: dam GF-D / fetus 3

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: placenta

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: Sample 24


E-MTAB-12442:Sample 25

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 25

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: germ-free

text: dam GF-E / fetus 1

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: female

text: Sample 25

characteristic: title


E-MTAB-12442:Sample 26

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 26

text: embryonic 18.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: germ-free

text: dam GF-E / fetus 1

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: female

text: Sample 26


E-MTAB-12442:Sample 27

text: public

text: E-MTAB-12442:Sample 27

text: embryonic 18.5

text: ArrayExpress

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: germ-free

characteristic: growth condition

text: dam GF-E / fetus 1

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: placenta

characteristic: organism part

text: Mus musculus

text: female

characteristic: sex

characteristic: strain

text: Sample 27


E-MTAB-12442:Sample 28

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 28

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: germ-free

text: dam GF-E / fetus 2

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: male

text: Sample 28

characteristic: title


E-MTAB-12442:Sample 29

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 29

text: embryonic 18.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: germ-free

text: dam GF-E / fetus 2

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: male

text: Sample 29


E-MTAB-12442:Sample 30

text: public

text: E-MTAB-12442:Sample 30

text: embryonic 18.5

text: ArrayExpress

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: germ-free

characteristic: growth condition

text: dam GF-E / fetus 2

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: placenta

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: Sample 30


E-MTAB-12442:Sample 31

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 31

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: germ-free

text: dam GF-F / fetus 1

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: male

text: Sample 31

characteristic: title


E-MTAB-12442:Sample 32

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 32

text: embryonic 18.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: germ-free

text: dam GF-F / fetus 1

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: male

text: Sample 32


E-MTAB-12442:Sample 33

text: public

text: E-MTAB-12442:Sample 33

text: embryonic 18.5

text: ArrayExpress

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: germ-free

characteristic: growth condition

text: dam GF-F / fetus 1

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: placenta

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: Sample 33


E-MTAB-12442:Sample 34

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 34

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: germ-free

text: dam GF-F / fetus 2

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: female

text: Sample 34

characteristic: title


E-MTAB-12442:Sample 35

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 35

text: embryonic 18.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: germ-free

text: dam GF-F / fetus 2

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: female

text: Sample 35


E-MTAB-12442:Sample 36

text: public

text: E-MTAB-12442:Sample 36

text: embryonic 18.5

text: ArrayExpress

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: germ-free

characteristic: growth condition

text: dam GF-F / fetus 2

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: placenta

characteristic: organism part

text: Mus musculus

text: female

characteristic: sex

characteristic: strain

text: Sample 36


E-MTAB-12442:Sample 37

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 37

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-B / fetus 1

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: male

text: Sample 37

characteristic: title


E-MTAB-12442:Sample 38

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 38

text: embryonic 18.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-B / fetus 1

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: male

text: Sample 38


E-MTAB-12442:Sample 39

text: public

text: E-MTAB-12442:Sample 39

text: embryonic 18.5

text: ArrayExpress

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: specific pathogen free

characteristic: growth condition

text: dam SPF-B / fetus 1

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: placenta

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: Sample 39


E-MTAB-12442:Sample 40

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 40

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-B / fetus 4

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: female

text: Sample 40

characteristic: title


E-MTAB-12442:Sample 41

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 41

text: embryonic 18.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-B / fetus 4

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: female

text: Sample 41


E-MTAB-12442:Sample 42

text: public

text: E-MTAB-12442:Sample 42

text: embryonic 18.5

text: ArrayExpress

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: specific pathogen free

characteristic: growth condition

text: dam SPF-B / fetus 4

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: placenta

characteristic: organism part

text: Mus musculus

text: female

characteristic: sex

characteristic: strain

text: Sample 42


E-MTAB-12442:Sample 43

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 43

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-C / fetus 1

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: male

text: Sample 43

characteristic: title


E-MTAB-12442:Sample 44

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 44

text: embryonic 18.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-C / fetus 1

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: male

text: Sample 44


E-MTAB-12442:Sample 45

text: public

text: E-MTAB-12442:Sample 45

text: embryonic 18.5

text: ArrayExpress

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: specific pathogen free

characteristic: growth condition

text: dam SPF-C / fetus 1

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: placenta

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: Sample 45


E-MTAB-12442:Sample 46

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 46

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-C / fetus 2

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: female

text: Sample 46

characteristic: title


E-MTAB-12442:Sample 47

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 47

text: embryonic 18.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-C / fetus 2

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: female

text: Sample 47


E-MTAB-12442:Sample 48

text: public

text: E-MTAB-12442:Sample 48

text: embryonic 18.5

text: ArrayExpress

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: specific pathogen free

characteristic: growth condition

text: dam SPF-C / fetus 2

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: placenta

characteristic: organism part

text: Mus musculus

text: female

characteristic: sex

characteristic: strain

text: Sample 48


E-MTAB-12442:Sample 49

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 49

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-D / fetus 1

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: female

text: Sample 49

characteristic: title


E-MTAB-12442:Sample 50

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 50

text: embryonic 18.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-D / fetus 1

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: female

text: Sample 50


E-MTAB-12442:Sample 51

text: public

text: E-MTAB-12442:Sample 51

text: embryonic 18.5

text: ArrayExpress

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: specific pathogen free

characteristic: growth condition

text: dam SPF-D / fetus 1

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: placenta

characteristic: organism part

text: Mus musculus

text: female

characteristic: sex

characteristic: strain

text: Sample 51


E-MTAB-12442:Sample 52

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 52

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-D / fetus 2

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: male

text: Sample 52

characteristic: title


E-MTAB-12442:Sample 53

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 53

text: embryonic 18.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-D / fetus 2

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: male

text: Sample 53


E-MTAB-12442:Sample 54

text: public

text: E-MTAB-12442:Sample 54

text: embryonic 18.5

text: ArrayExpress

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: specific pathogen free

characteristic: growth condition

text: dam SPF-D / fetus 2

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: placenta

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: Sample 54


E-MTAB-12442:Sample 55

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 55

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-E / fetus 1

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: female

text: Sample 55

characteristic: title


E-MTAB-12442:Sample 56

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 56

text: embryonic 18.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-E / fetus 1

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: female

text: Sample 56


E-MTAB-12442:Sample 57

text: public

text: E-MTAB-12442:Sample 57

text: embryonic 18.5

text: ArrayExpress

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: specific pathogen free

characteristic: growth condition

text: dam SPF-E / fetus 1

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: placenta

characteristic: organism part

text: Mus musculus

text: female

characteristic: sex

characteristic: strain

text: Sample 57


E-MTAB-12442:Sample 58

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 58

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-E / fetus 3

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: male

text: Sample 58

characteristic: title


E-MTAB-12442:Sample 59

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 59

text: embryonic 18.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-E / fetus 3

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: male

text: Sample 59


E-MTAB-12442:Sample 60

text: public

text: E-MTAB-12442:Sample 60

text: embryonic 18.5

text: ArrayExpress

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: specific pathogen free

characteristic: growth condition

text: dam SPF-E / fetus 3

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: placenta

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: Sample 60


E-MTAB-12442:Sample 61

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 61

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-F / fetus 1

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: male

text: Sample 61

characteristic: title


E-MTAB-12442:Sample 62

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 62

text: embryonic 18.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-F / fetus 1

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: male

text: Sample 62


E-MTAB-12442:Sample 63

text: public

text: E-MTAB-12442:Sample 63

text: embryonic 18.5

text: ArrayExpress

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: specific pathogen free

characteristic: growth condition

text: dam SPF-F / fetus 1

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: placenta

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: Sample 63


E-MTAB-12442:Sample 64

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 64

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-F / fetus 4

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: female

text: Sample 64

characteristic: title


E-MTAB-12442:Sample 65

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 65

text: embryonic 18.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-F / fetus 4

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: female

text: Sample 65


E-MTAB-12442:Sample 66

text: public

text: E-MTAB-12442:Sample 66

text: embryonic 18.5

text: ArrayExpress

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: specific pathogen free

characteristic: growth condition

text: dam SPF-F / fetus 4

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: placenta

characteristic: organism part

text: Mus musculus

text: female

characteristic: sex

characteristic: strain

text: Sample 66


E-MTAB-12442:Sample 67

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 67

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-G / fetus 1

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: female

text: Sample 67

characteristic: title


E-MTAB-12442:Sample 68

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 68

text: embryonic 18.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-G / fetus 1

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: female

text: Sample 68


E-MTAB-12442:Sample 69

text: public

text: E-MTAB-12442:Sample 69

text: embryonic 18.5

text: ArrayExpress

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: specific pathogen free

characteristic: growth condition

text: dam SPF-G / fetus 1

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: placenta

characteristic: organism part

text: Mus musculus

text: female

characteristic: sex

characteristic: strain

text: Sample 69


E-MTAB-12442:Sample 70

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 70

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-G / fetus 3

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: male

text: Sample 70

characteristic: title


E-MTAB-12442:Sample 71

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 71

text: embryonic 18.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: specific pathogen free

text: dam SPF-G / fetus 3

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: male

text: Sample 71


E-MTAB-12442:Sample 72

text: public

text: E-MTAB-12442:Sample 72

text: embryonic 18.5

text: ArrayExpress

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: specific pathogen free

characteristic: growth condition

text: dam SPF-G / fetus 3

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: placenta

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: Sample 72


text: Not Applicable

characteristic: ArrayExpress-PHENOTYPE

text: Moraxella catarrhalis

characteristic: ArrayExpress-SPECIES

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Not Applicable

characteristic: PHENOTYPE

characteristic: SRA accession

characteristic: Submitter Id

text: Moraxella catarrhalis

text: Moraxella catarrhalis

text: Moraxella catarrhalis

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

tag: Namespace:Clinical Bioinformatics Area

text: Servicio de Microbiologia, Hospital Universitario Virgen del Rocio, Sevilla, Spain

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region. Sequencing supported by RELECOV consortium, funded by the European Centre for Diseases Prevention and Control (ECDC) under Grant Agreement ECDC/HERA/2021/024 ECDC.12241

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: active surveillance in response to outbreak

characteristic: sample capture status

text: AND28671, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28672, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28673, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28674, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28675, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28676, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28680, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28682, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28683, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: Servicio Andaluz de Salud, Andalusia, Spain

text: not provided

text: Spain

text: not provided

text: not provided

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28686, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28688, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28692, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28693, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: Servicio de Microbiologia, Hospital Puerta del Mar, Cadiz, Spain

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28694, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: Servicio de Microbiologia, Hospital Universitario Virgen del Rocio, Sevilla, Spain

text: not provided

characteristic: collector name

text: Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region. Sequencing supported by RELECOV consortium, funded by the European Centre for Diseases Prevention and Control (ECDC) under Grant Agreement ECDC/HERA/2021/024 ECDC.12241

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: active surveillance in response to outbreak

text: AND28695, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28696, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28697, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28699, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28704, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28706, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28708, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28709, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28712, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28713, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28716, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28717, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28719, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28721, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: Servicio de Microbiologia, Hospital Universitario Virgen del Rocio, Sevilla, Spain

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28723, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

text: Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region. Sequencing supported by RELECOV consortium, funded by the European Centre for Diseases Prevention and Control (ECDC) under Grant Agreement ECDC/HERA/2021/024 ECDC.12241

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: active surveillance in response to outbreak

text: AND28728, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28729, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28730, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: Servicio de Microbiologia, Hospital Reina Sofia, Cordoba, Spain

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28732, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28733, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28734, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28735, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28736, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28737, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28739, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28740, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28741, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28742, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28743, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region. Sequencing supported by RELECOV consortium, funded by the European Centre for Diseases Prevention and Control (ECDC) under Grant Agreement ECDC/HERA/2021/024 ECDC.12241

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28744, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: active surveillance in response to outbreak

text: AND28745, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28746, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: Servicio de Microbiologia, Hospital Universitario Virgen del Rocio, Sevilla, Spain

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28748, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28749, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28750, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28751, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28752, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: Servicio Andaluz de Salud, Andalusia, Spain

text: not provided

text: Spain

text: not provided

text: not provided

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28753, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: Servicio de Microbiologia, Hospital Reina Sofia, Cordoba, Spain

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28754, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28755, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28757, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region. Sequencing supported by RELECOV consortium, funded by the European Centre for Diseases Prevention and Control (ECDC) under Grant Agreement ECDC/HERA/2021/024 ECDC.12241

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28758, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: active surveillance in response to outbreak

text: AND28759, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

text: Spain

text: not provided

text: not provided

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28760, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: Servicio de Microbiologia, Hospital Universitario Virgen del Rocio, Sevilla, Spain

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28761, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28762, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28763, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The Lab of OE Biotech

text: public

characteristic: SRA accession

tag: Namespace:The Lab of OE Biotech

characteristic: Submitter Id

unit: month

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: Protocols: They are male adult ICR mice (wild type) and kept under temperature 22°C, 12 h light/dark cycle with free access to standard rodent chow and water. Sham：Muscle samples were from sham group. Sham group in which PBS was injected into the tibialis anterior muscle for 14 days；Den14d：Muscle samples were from Den group. Den group in which PBS was injected into the tibialis anterior muscle after sciatic nerve injury for 14 days；EVs14：Muscle samples were from SKP-SC-EVs group. SKP-SC-EVs group in which PBS containing SKP-SC-EVs was injected into the tibialis anterior muscle after sciatic nerve injury for 14 days. 1. sciatic nerve transection protocol - The mouse skin was sterilized and dissected in the surgical area of the left thigh, the muscle was bluntly separated to expose the sciatic nerve, and then the sciatic nerve was transected 10 mm. 2. SKP-SC-EVs treatment protocol - extracellular vesicles derived from skin-derived precursors-derived Schwann cells. mouse grow in different time mouse sample from different time Total RNA was extracted using Trizol LS. Cells were fractionated and cytoplasmic RNA was extracted using the Paris Kit (Life technologies) according to the manufacturer's instructions mRNA-Seq libraries (from polyA+ cytoplasmic RNA) were created according to the standard Illumina protocol.

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: skeletal muscle tissue

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

text: BALB/c

characteristic: strain

characteristic: title


characteristic: ENA-CHECKLIST

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: Servicio de Microbiologia, Plataforma Provincial de Almería, Almería, Spain

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28766, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28767, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28768, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28769, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28770, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28771, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

text: Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region. Sequencing supported by RELECOV consortium, funded by the European Centre for Diseases Prevention and Control (ECDC) under Grant Agreement ECDC/HERA/2021/024 ECDC.12241

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28772, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: active surveillance in response to outbreak

text: AND28773, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28774, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28775, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28776, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28777, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28778, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28779, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: Servicio de Microbiologia, Plataforma Provincial de Almería, Almería, Spain

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28780, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28781, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28782, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28783, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: AND28784, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28785, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

characteristic: collector name

text: Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region. Sequencing supported by RELECOV consortium, funded by the European Centre for Diseases Prevention and Control (ECDC) under Grant Agreement ECDC/HERA/2021/024 ECDC.12241

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28786, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: active surveillance in response to outbreak

characteristic: sample capture status

text: AND28787, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: AND28788, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28789, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region