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text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: ammonium

text: freshwater river biome

characteristic: broad-scale environmental context

characteristic: chloride

characteristic: collection date

text: Grand River, Site 16, High flow

characteristic: description

text: water

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: freshwater river

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA gene

characteristic: target gene

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: freshwater river biome

characteristic: conductivity

characteristic: depth

text: Grand River, Site 17, Low flow, Before sunrise

characteristic: dissolved carbon dioxide

characteristic: dissolved inorganic carbon

characteristic: dissolved organic carbon

characteristic: dissolved oxygen

text: water

characteristic: environmental medium

text: Canada

text: freshwater river

characteristic: local environmental context

characteristic: nitrate

characteristic: nitrite

text: metagenome

characteristic: pH

text: metagenome

text: Illumina sequencing

characteristic: soluble reactive phosphorus

characteristic: sulfate

text: 16S rRNA gene

characteristic: temperature

characteristic: total nitrogen

characteristic: total phosphorus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: ammonium

text: freshwater river biome

characteristic: broad-scale environmental context

characteristic: chloride

characteristic: collection date

text: Grand River, Site 17, Low flow, Near solar noon

characteristic: description

text: water

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: freshwater river

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA gene

characteristic: target gene

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: freshwater river biome

characteristic: conductivity

characteristic: depth

text: Grand RIver, Site 17, High flow

characteristic: dissolved carbon dioxide

characteristic: dissolved inorganic carbon

characteristic: dissolved organic carbon

characteristic: dissolved oxygen

text: water

characteristic: environmental medium

text: Canada

text: freshwater river

characteristic: local environmental context

characteristic: nitrate

characteristic: nitrite

text: metagenome

characteristic: pH

text: metagenome

text: Illumina sequencing

characteristic: soluble reactive phosphorus

characteristic: sulfate

text: 16S rRNA gene

characteristic: temperature

characteristic: total nitrogen

characteristic: total phosphorus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: ammonium

text: freshwater river biome

characteristic: broad-scale environmental context

characteristic: chloride

characteristic: collection date

text: Grand River, Site 18, Low flow, Before sunrise

characteristic: description

text: water

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: freshwater river

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA gene

characteristic: target gene

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: freshwater river biome

characteristic: conductivity

characteristic: depth

text: Grand River, Site 18, Low flow, Near solar noon

characteristic: dissolved carbon dioxide

characteristic: dissolved inorganic carbon

characteristic: dissolved organic carbon

characteristic: dissolved oxygen

text: water

characteristic: environmental medium

text: Canada

text: freshwater river

characteristic: local environmental context

characteristic: nitrate

characteristic: nitrite

text: metagenome

characteristic: pH

text: metagenome

text: Illumina sequencing

characteristic: soluble reactive phosphorus

characteristic: sulfate

text: 16S rRNA gene

characteristic: temperature

characteristic: total nitrogen

characteristic: total phosphorus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: ammonium

text: freshwater river biome

characteristic: broad-scale environmental context

characteristic: chloride

characteristic: collection date

text: Grand River, Site 18, High flow

characteristic: description

text: water

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: freshwater river

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA gene

characteristic: target gene

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: freshwater river biome

characteristic: conductivity

characteristic: depth

text: Grand River, Site 19, Low flow, Before sunrise

characteristic: dissolved carbon dioxide

characteristic: dissolved inorganic carbon

characteristic: dissolved organic carbon

characteristic: dissolved oxygen

text: water

characteristic: environmental medium

text: Canada

text: freshwater river

characteristic: local environmental context

characteristic: nitrate

characteristic: nitrite

text: metagenome

characteristic: pH

text: metagenome

text: Illumina sequencing

characteristic: soluble reactive phosphorus

characteristic: sulfate

text: 16S rRNA gene

characteristic: temperature

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characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: ammonium

text: freshwater river biome

characteristic: broad-scale environmental context

characteristic: chloride

characteristic: collection date

text: Grand River, Site 19, Low flow, Near solar noon

characteristic: description

text: water

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: freshwater river

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA gene

characteristic: target gene

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

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characteristic: conductivity

characteristic: depth

text: Grand River, Site 19, High flow

characteristic: dissolved carbon dioxide

characteristic: dissolved inorganic carbon

characteristic: dissolved organic carbon

characteristic: dissolved oxygen

text: water

characteristic: environmental medium

text: Canada

text: freshwater river

characteristic: local environmental context

characteristic: nitrate

characteristic: nitrite

text: metagenome

characteristic: pH

text: metagenome

text: Illumina sequencing

characteristic: soluble reactive phosphorus

characteristic: sulfate

text: 16S rRNA gene

characteristic: temperature

characteristic: total nitrogen

characteristic: total phosphorus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: ammonium

text: freshwater river biome

characteristic: broad-scale environmental context

characteristic: chloride

characteristic: collection date

text: Grand River, Site 20, Low flow, Before sunrise

characteristic: description

text: water

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: freshwater river

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA gene

characteristic: target gene

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

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characteristic: conductivity

characteristic: depth

text: Grand River, Site 20, Low flow, Near solar noon

characteristic: dissolved carbon dioxide

characteristic: dissolved inorganic carbon

characteristic: dissolved organic carbon

characteristic: dissolved oxygen

text: water

characteristic: environmental medium

text: Canada

text: freshwater river

characteristic: local environmental context

characteristic: nitrate

characteristic: nitrite

text: metagenome

characteristic: pH

text: metagenome

text: Illumina sequencing

characteristic: soluble reactive phosphorus

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text: 16S rRNA gene

characteristic: temperature

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characteristic: ENA-CHECKLIST

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characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

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characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: ammonium

text: freshwater river biome

characteristic: broad-scale environmental context

characteristic: chloride

characteristic: collection date

text: Grand River, Site 20, Low flow, Mid-morning

characteristic: description

text: water

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: freshwater river

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA gene

characteristic: target gene

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

text: freshwater river biome

characteristic: conductivity

characteristic: depth

text: Grand River, Site 20, High flow

characteristic: dissolved carbon dioxide

characteristic: dissolved inorganic carbon

characteristic: dissolved organic carbon

characteristic: dissolved oxygen

text: water

characteristic: environmental medium

text: Canada

text: freshwater river

characteristic: local environmental context

characteristic: nitrate

characteristic: nitrite

text: metagenome

characteristic: pH

text: metagenome

text: Illumina sequencing

characteristic: soluble reactive phosphorus

characteristic: sulfate

text: 16S rRNA gene

characteristic: temperature

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characteristic: total phosphorus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: ammonium

text: freshwater river biome

characteristic: broad-scale environmental context

characteristic: chloride

characteristic: collection date

text: Grand River, SIte 21, Low flow, Before sunrise

characteristic: description

text: water

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: freshwater river

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA gene

characteristic: target gene

characteristic: title


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

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characteristic: conductivity

characteristic: depth

text: Grand River, Site 21, Low flow, Near solar noon

characteristic: dissolved carbon dioxide

characteristic: dissolved inorganic carbon

characteristic: dissolved organic carbon

characteristic: dissolved oxygen

text: water

characteristic: environmental medium

text: Canada

text: freshwater river

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characteristic: nitrite

text: metagenome

characteristic: pH

text: metagenome

text: Illumina sequencing

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characteristic: sulfate

text: 16S rRNA gene

characteristic: temperature

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characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: ammonium

text: freshwater river biome

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characteristic: chloride

characteristic: collection date

text: Grand RIver, Site 21, High flow

characteristic: description

text: water

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: freshwater river

text: metagenome

characteristic: organism

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characteristic: sequencing method

text: 16S rRNA gene

characteristic: target gene

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characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: freshwater river biome

characteristic: conductivity

characteristic: depth

text: Grand River, Site 22, Low flow, Before sunrise

characteristic: dissolved carbon dioxide

characteristic: dissolved inorganic carbon

characteristic: dissolved organic carbon

characteristic: dissolved oxygen

text: water

characteristic: environmental medium

text: Canada

text: freshwater river

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characteristic: nitrate

characteristic: nitrite

text: metagenome

characteristic: pH

text: metagenome

text: Illumina sequencing

characteristic: soluble reactive phosphorus

characteristic: sulfate

text: 16S rRNA gene

characteristic: temperature

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characteristic: total phosphorus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

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characteristic: SRA accession

characteristic: Submitter Id

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characteristic: ammonium

text: freshwater river biome

characteristic: broad-scale environmental context

characteristic: chloride

characteristic: collection date

text: Grand River, Site 22, Low flow, Near solar noon

characteristic: description

text: water

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: freshwater river

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA gene

characteristic: target gene

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characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: freshwater river biome

characteristic: conductivity

characteristic: depth

text: Grand River, Site 22, High flow

characteristic: dissolved carbon dioxide

characteristic: dissolved inorganic carbon

characteristic: dissolved organic carbon

characteristic: dissolved oxygen

text: water

characteristic: environmental medium

text: Canada

text: freshwater river

characteristic: local environmental context

characteristic: nitrate

characteristic: nitrite

text: metagenome

characteristic: pH

text: Biogeographic 16S rRNA gene survey of the Grand River

text: metagenome

text: Illumina sequencing

characteristic: soluble reactive phosphorus

characteristic: sulfate

text: 16S rRNA gene

characteristic: temperature

characteristic: total nitrogen

characteristic: total phosphorus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: ammonium

text: freshwater river biome

characteristic: broad-scale environmental context

characteristic: chloride

characteristic: collection date

text: Grand River, Site 23, Low flow, Before sunrise

characteristic: description

text: water

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: freshwater river

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA gene

characteristic: target gene

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: freshwater river biome

characteristic: conductivity

characteristic: depth

text: Grand River, Site 23, Low flow, Near solar noon

characteristic: dissolved carbon dioxide

characteristic: dissolved inorganic carbon

characteristic: dissolved organic carbon

characteristic: dissolved oxygen

text: water

characteristic: environmental medium

text: Canada

text: freshwater river

characteristic: local environmental context

characteristic: nitrate

characteristic: nitrite

text: metagenome

characteristic: pH

text: metagenome

text: Illumina sequencing

characteristic: soluble reactive phosphorus

characteristic: sulfate

text: 16S rRNA gene

characteristic: temperature

characteristic: total nitrogen

characteristic: total phosphorus


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: altitude

characteristic: ammonium

text: freshwater river biome

characteristic: broad-scale environmental context

characteristic: chloride

characteristic: collection date

text: Grand River, Site 23, Low flow, Mid-morning

characteristic: description

text: water

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: freshwater river

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA gene

characteristic: target gene

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: freshwater river biome

characteristic: conductivity

characteristic: depth

text: Grand River, Site 23, High flow

characteristic: dissolved carbon dioxide

characteristic: dissolved inorganic carbon

characteristic: dissolved organic carbon

characteristic: dissolved oxygen

text: water

characteristic: environmental medium

text: Canada

text: freshwater river

characteristic: local environmental context

characteristic: nitrate

characteristic: nitrite

text: metagenome

characteristic: pH

text: metagenome

text: Illumina sequencing

characteristic: soluble reactive phosphorus

characteristic: sulfate

text: 16S rRNA gene

characteristic: temperature

characteristic: total nitrogen

characteristic: total phosphorus


Guelph

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Guelph

characteristic: Submitter Id

characteristic: altitude

text: wastewater treatment plant

characteristic: broad-scale environmental context

characteristic: collection date

text: Guelph WWTP effluent

characteristic: description

text: water

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: wastewater treatment plant

text: metagenome

characteristic: organism

characteristic: project name

text: metagenome

text: Illumina sequencing

characteristic: sequencing method

text: 16S rRNA gene

characteristic: target gene

text: Guelph

characteristic: title


Kitchener

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Waterloo

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Kitchener

text: wastewater treatment plant

characteristic: depth

text: Kitchener WWTP effuent

text: water

characteristic: environmental medium

text: Canada

text: wastewater treatment plant

characteristic: local environmental context

text: metagenome

text: metagenome

text: Illumina sequencing

text: 16S rRNA gene

text: Kitchener


Waterloo

text: University of Waterloo

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Waterloo

characteristic: Submitter Id

characteristic: altitude

text: wastewater treatment plant

characteristic: broad-scale environmental context

characteristic: collection date

text: Waterloo WWTP effluent

characteristic: description

text: water

text: Canada

characteristic: geographic location (country and/or sea)

text: wastewater treatment plant

text: metagenome

text: metagenome

text: Illumina sequencing

text: 16S rRNA gene

text: Waterloo


ChineseAmber

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNC Charlotte Bioinformatics

text: public

text: ChineseAmber

tag: Namespace:UNC Charlotte Bioinformatics

text: sorghum

characteristic: common name

text: Sorghum CPNAM parent genomic DNA

characteristic: estimated size

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: glasshouse

characteristic: growth facility

characteristic: isolation and growth condition

text: Sorghum bicolor

characteristic: organism

text: sorghum

characteristic: organism common name

text: leaf production stage

characteristic: plant developmental stage

text: soil

characteristic: plant growth medium

text: leaf

characteristic: plant structure

text: diploid

characteristic: ploidy

text: Sorghum bicolor

text: bicolor

characteristic: subspecific genetic lineage name

text: race

characteristic: subspecific genetic lineage rank

text: CPNAM-ChineseAmber

characteristic: title


Grassl

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNC Charlotte Bioinformatics

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Grassl

characteristic: Submitter Id

characteristic: collection date

text: sorghum

text: Sorghum CPNAM parent genomic DNA

characteristic: description

text: Uganda

characteristic: geographic location (country and/or sea)

text: glasshouse

text: Sorghum bicolor

text: sorghum

text: leaf production stage

text: soil

text: leaf

text: diploid

text: Sorghum bicolor

text: caudatum

text: race

text: CPNAM-Grassl


Leoti

characteristic: ENA-FIRST-PUBLIC

text: UNC Charlotte Bioinformatics

text: public

text: Leoti

text: sorghum

characteristic: common name

text: Sorghum CPNAM parent genomic DNA

characteristic: estimated size

text: Hungary

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: glasshouse

characteristic: growth facility

characteristic: isolation and growth condition

text: Sorghum bicolor

characteristic: organism

text: sorghum

characteristic: organism common name

text: leaf production stage

characteristic: plant developmental stage

text: soil

characteristic: plant growth medium

text: leaf

characteristic: plant structure

text: diploid

text: Sorghum bicolor

text: kafir-bicolor

text: race

text: CPNAM-Leoti


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNC Charlotte Bioinformatics

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: sorghum

text: Sorghum CPNAM parent genomic DNA

text: South Africa

text: glasshouse

text: Sorghum bicolor

text: sorghum

text: leaf production stage

text: soil

text: leaf

text: diploid

characteristic: ploidy

text: Sorghum bicolor

text: kafir

characteristic: subspecific genetic lineage name

text: race

characteristic: subspecific genetic lineage rank

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: UNC Charlotte Bioinformatics

text: public

characteristic: Submitter Id

characteristic: collection date

text: sorghum

characteristic: common name

text: Sorghum CPNAM parent genomic DNA

characteristic: description

characteristic: estimated size

text: Uganda

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: glasshouse

characteristic: growth facility

characteristic: isolation and growth condition

text: Sorghum bicolor

characteristic: organism

text: sorghum

text: leaf production stage

text: soil

text: leaf

text: diploid

text: Sorghum bicolor

text: kafir

text: race


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNC Charlotte Bioinformatics

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: sorghum

text: Sorghum CPNAM parent genomic DNA

text: Ethiopia

text: glasshouse

text: Sorghum bicolor

text: sorghum

characteristic: organism common name

text: leaf production stage

characteristic: plant developmental stage

text: soil

characteristic: plant growth medium

text: leaf

characteristic: plant structure

text: diploid

text: Sorghum bicolor

text: durra

text: race


characteristic: ENA-FIRST-PUBLIC

text: UNC Charlotte Bioinformatics

text: public

characteristic: Submitter Id

characteristic: collection date

text: sorghum

characteristic: common name

text: Sorghum CPNAM parent genomic DNA

characteristic: description

characteristic: estimated size

text: Togo

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: glasshouse

text: Sorghum bicolor

text: sorghum

text: leaf production stage

text: soil

text: leaf

text: diploid

characteristic: ploidy

text: Sorghum bicolor

text: guinea-bicolor

characteristic: subspecific genetic lineage name

text: race

characteristic: subspecific genetic lineage rank

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNC Charlotte Bioinformatics

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: sorghum

text: Sorghum CPNAM parent genomic DNA

text: Cameroon

characteristic: geographic location (longitude)

text: glasshouse

characteristic: growth facility

characteristic: isolation and growth condition

text: Sorghum bicolor

characteristic: organism

text: sorghum

text: leaf production stage

text: soil

text: leaf

text: diploid

text: Sorghum bicolor

text: durra

text: race


characteristic: ENA-FIRST-PUBLIC

text: UNC Charlotte Bioinformatics

text: public

characteristic: Submitter Id

characteristic: collection date

text: sorghum

characteristic: common name

text: Sorghum CPNAM parent genomic DNA

characteristic: description

characteristic: estimated size

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: glasshouse

text: Sorghum bicolor

text: sorghum

characteristic: organism common name

text: leaf production stage

characteristic: plant developmental stage

text: soil

characteristic: plant growth medium

text: leaf

characteristic: plant structure

text: diploid

text: Sorghum bicolor

text: kafir

text: race


Rio

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNC Charlotte Bioinformatics

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Rio

text: sorghum

text: Sorghum CPNAM parent genomic DNA

text: USA

text: glasshouse

text: Sorghum bicolor

text: sorghum

text: leaf production stage

text: soil

text: leaf

text: diploid

characteristic: ploidy

text: Sorghum bicolor

text: durra-caudatum

characteristic: subspecific genetic lineage name

text: race

characteristic: subspecific genetic lineage rank

text: CPNAM-Rio

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: 291 resistant genomes

text: public

tag: Namespace:291 resistant genomes

characteristic: Submitter Id

text: malaria parasite P. falciparum

characteristic: common name

text: MMV020291-resistant P. falciparuM

characteristic: description

text: Plasmodium falciparum

characteristic: organism

text: Plasmodium falciparum


characteristic: ENA-CHECKLIST

text: public

tag: Namespace:Laboratory of Cell Signalling, Institute of Microbiology of the Czech Academy of Sciences

text: ArrayExpress

characteristic: broker name

text: MDCK

text: epithelial cell

text: dog

text: Protocols: Parental MDCK cell line (FRT), ERK2 overexpressing MDCK cell line (ERK2) and MDCK cell line expressing conditionally active ΔRaf1:ER protein (Raf1:ER) were grown in triplicates for parental cells and in duplicates for ERK2 and Raf1:ER cells. Cells were grown for 48 h in DMEM supplemented with 10% FBS. Raf1:ER cells were stimulated by 4-Hydroxytamoxifen for 24 h prior to harvesting to activate the ERK pathway. Cells at ~ 50% confluency were lysed in RLT buffer, RNA was extracted by RNeasy mini kit and RNA integrity was verified using Agilent 2100 Bioanalyzer. Poly(A) enriched RNA was subjected to RNA-sequencing by the Illumina platform. Processing of poly(A) enriched RNA and RNA-sequencing was performed on a commercial basis by SEQme company (https://www.seqme.eu/). 15 million single-end 75nt reads per sample were obtained.

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: Canis lupus familiaris

text: Canis lupus familiaris

text: kidney

characteristic: organism part

text: wild type

characteristic: phenotype

characteristic: replicate

text: control

characteristic: sample group

text: Canis lupus familiaris


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Laboratory of Cell Signalling, Institute of Microbiology of the Czech Academy of Sciences

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: MDCK

text: epithelial cell

text: dog

text: adult

text: normal

text: wild type genotype

text: Canis lupus familiaris

text: Canis lupus familiaris

text: kidney

text: wild type

text: control

text: Canis lupus familiaris


characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: Submitter Id

text: ArrayExpress

text: MDCK

text: epithelial cell

text: dog

characteristic: common name

characteristic: description

text: adult

text: normal

text: N-terminal FLAG-mERK

text: Canis lupus familiaris

characteristic: organism

text: Canis lupus familiaris

text: kidney

text: ERK2 overexpression

text: Canis lupus familiaris

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: ArrayExpress

characteristic: broker name

text: MDCK

text: epithelial cell

text: dog

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: inducible Raf1:ER

characteristic: genotype

text: Canis lupus familiaris

text: Canis lupus familiaris

text: kidney

characteristic: organism part

text: tamoxifen-induced Raf1:ER expression

text: Canis lupus familiaris


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

tag: Namespace:Department of Clinical and Molecular Medicine, Norwegian University of Science and Technology

text: ArrayExpress

text: epithelial cell

text: human

text: Protocols: Calu-3 cells were grown in complete DMEM-F12 media in a humidified incubator at 37 °C in the presence of 5% CO2. The medium was replaced with DMEM-F12 containing 0.2% BSA and Pen-Strep prior to infection experiments. The cells were mock- or virus-infected at an MOI of 0.1 for 0, 3, 6, 12, 24, and 48 hours. At each time point, the samples were washed twice with 1x TBS buffer and harvested in QIAzol lysis reagent (Qiagen, Germany)followed by DNAse digestion (Qiagen, Germany) treatment on the RNeasy Mini columns, according to the manufacturer’s protocol. The amount of total RNA was quantified using the Qubit 2.0 Fluorometric Quantitation system (Thermo Fisher Scientific, Waltham, MA, USA), and the RNA integrity number (RIN) was determined using the Experion Automated Electrophoresis System (Bio-Rad, Hercules, CA, USA). RNA-seq libraries were prepared with the TruSeq Stranded mRNA LT sample preparation kit (Illumina, San Diego, CA, USA) using Sciclone and Zephyr liquid handling workstations (PerkinElmer, Waltham, MA, USA) for pre- and post-PCR steps, respectively. Library concentrations were quantified with the Qubit 2.0 Fluorometric Quantitation system (Life Technologies, Carlsbad, CA, USA). The size distribution was assessed using the Experion Automated Electrophoresis System (Bio-Rad, Hercules, CA, USA). For sequencing, samples were diluted and pooled into NGS libraries in equimolar amounts.

text: lung adenocarcinoma

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


text: Department of Clinical and Molecular Medicine, Norwegian University of Science and Technology

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: epithelial cell

text: human

text: lung adenocarcinoma

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-03-09-2022-18:41:49:637-72688

tag: Namespace:University of Helsinki, Institute of Biotechnology

characteristic: Submitter Id

text: HC sample of NL cohort

text: human gut metagenome

text: human gut metagenome


text: University of Helsinki, Institute of Biotechnology

text: public

text: ena-SAMPLE-TAB-03-09-2022-18:41:49:637-72689

text: HC sample of NL cohort

characteristic: description

text: human gut metagenome

characteristic: organism

text: human gut metagenome


characteristic: ENA-CHECKLIST

text: public

text: ena-SAMPLE-TAB-03-09-2022-18:41:49:637-72690

text: HC sample of NL cohort

text: human gut metagenome

text: human gut metagenome

characteristic: title


text: public

text: ena-SAMPLE-TAB-03-09-2022-18:41:49:637-72691

text: HC sample of NL cohort

text: human gut metagenome

text: human gut metagenome


text: public

text: ena-SAMPLE-TAB-03-09-2022-18:41:49:638-72692

text: HC sample of NL cohort

text: human gut metagenome

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text: public

text: ena-SAMPLE-TAB-03-09-2022-18:41:49:638-72693

text: HC sample of NL cohort

text: human gut metagenome

text: human gut metagenome


text: public

text: ena-SAMPLE-TAB-03-09-2022-18:41:49:638-72694

text: HC sample of NL cohort

text: human gut metagenome

text: human gut metagenome


text: public

text: ena-SAMPLE-TAB-03-09-2022-18:41:49:638-72695

text: HC sample of NL cohort

text: human gut metagenome

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text: public

text: ena-SAMPLE-TAB-03-09-2022-18:41:49:638-72696

text: HC sample of NL cohort

text: human gut metagenome

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text: ena-SAMPLE-TAB-03-09-2022-18:41:49:638-72697

text: HC sample of NL cohort

text: human gut metagenome

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text: HC sample of NL cohort

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text: ena-SAMPLE-TAB-03-09-2022-18:41:49:638-72699

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text: HC sample of NL cohort

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text: HC sample of NL cohort

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text: HC sample of NL cohort

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text: HC sample of NL cohort

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text: University of Helsinki, Institute of Biotechnology

text: public

text: ena-SAMPLE-TAB-03-09-2022-18:41:49:638-72705

text: HC sample of NL cohort

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text: HC sample of NL cohort

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text: public

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text: HC sample of NL cohort

text: human gut metagenome

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text: HC sample of NL cohort

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text: HC sample of NL cohort

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text: HC sample of NL cohort

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text: ena-SAMPLE-TAB-03-09-2022-18:41:49:638-72711

text: HC sample of NL cohort

text: human gut metagenome

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text: HC sample of NL cohort

text: human gut metagenome

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text: public

text: ena-SAMPLE-TAB-03-09-2022-18:41:49:639-72713

text: HC sample of NL cohort

text: human gut metagenome

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text: public

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text: HC sample of NL cohort

text: human gut metagenome

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text: HC sample of NL cohort

text: human gut metagenome

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text: HC sample of NL cohort

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text: ena-SAMPLE-TAB-03-09-2022-18:41:49:639-72717

text: HC sample of NL cohort

text: human gut metagenome

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text: ena-SAMPLE-TAB-03-09-2022-18:41:49:639-72718

text: HC sample of NL cohort

text: human gut metagenome

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text: public

text: ena-SAMPLE-TAB-03-09-2022-18:41:49:639-72719

text: HC sample of NL cohort

text: human gut metagenome

text: human gut metagenome


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text: HC sample of NL cohort

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text: public

text: ena-SAMPLE-TAB-03-09-2022-18:41:49:639-72721

text: HC sample of NL cohort

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text: HC sample of NL cohort

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text: HC sample of NL cohort

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text: HC sample of NL cohort

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text: HC sample of NL cohort

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text: HC sample of NL cohort

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text: ena-SAMPLE-TAB-03-09-2022-18:41:49:639-72727

text: HC sample of NL cohort

text: human gut metagenome

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text: ena-SAMPLE-TAB-03-09-2022-18:41:49:639-72729

text: HC sample of NL cohort

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text: HC sample of NL cohort

text: human gut metagenome

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text: public

text: ena-SAMPLE-TAB-03-09-2022-18:41:49:639-72731

text: HC sample of NL cohort

text: human gut metagenome

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text: ena-SAMPLE-TAB-03-09-2022-18:41:49:639-72732

text: HC sample of NL cohort

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text: ena-SAMPLE-TAB-03-09-2022-18:41:49:640-72733

text: HC sample of NL cohort

text: human gut metagenome

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text: ena-SAMPLE-TAB-03-09-2022-18:41:49:640-72734

text: HC sample of NL cohort

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text: ena-SAMPLE-TAB-03-09-2022-18:41:49:640-72735

text: HC sample of NL cohort

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text: HC sample of NL cohort

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text: University of Helsinki, Institute of Biotechnology

text: public

text: ena-SAMPLE-TAB-03-09-2022-18:41:49:640-72737

text: HC sample of NL cohort

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text: HC sample of NL cohort

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text: HC sample of NL cohort

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text: HC sample of NL cohort

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text: University of Helsinki, Institute of Biotechnology

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text: HC sample of NL cohort

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