characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-101: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


status: PUBLIC

tag: attribute

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-102: Bacteria; Proteobacteria; Gammaproteobacteria

characteristic: description

text: mesocosm

text: Czech Republic

unit: DD

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Gammaproteobacteria bacterium

characteristic: organism

text: Gammaproteobacteria bacterium

text: multi-marker approach

characteristic: taxonomic identity marker

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-110: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Alcaligenaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Alcaligenaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

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characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-112: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-117: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

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text: public

characteristic: INSDC status

characteristic: SRA accession

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characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-122: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-127: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-128: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiales bacterium

characteristic: organism

text: Burkholderiales bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-129: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Oxalobacteraceae bacterium

characteristic: project name

characteristic: sample derived from

text: Oxalobacteraceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-130: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiaceae bacterium

characteristic: organism

text: Burkholderiaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-131: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Alcaligenaceae bacterium

characteristic: project name

text: Alcaligenaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-136: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Burkholderiaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-137: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiales bacterium

characteristic: project name

text: Burkholderiales bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-138: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiaceae bacterium

characteristic: organism

text: Burkholderiaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-14: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Burkholderiaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-140: Bacteria; Actinobacteria; Actinobacteria

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Actinobacteria bacterium

characteristic: organism

text: Actinobacteria bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-142: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

text: Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-18: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae; Flavipsychrobacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Flavipsychrobacter stenotrophus

characteristic: organism

characteristic: sample derived from

text: Flavipsychrobacter stenotrophus

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-19: Bacteria

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: bacterium

characteristic: project name

text: bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-21: Bacteria; Proteobacteria; Oligoflexia; Bdellovibrionales; Bdellovibrionaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Bdellovibrionaceae bacterium

characteristic: organism

text: Bdellovibrionaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-22: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-24: Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Methylophilaceae; Methylotenera

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Methylophilaceae bacterium

characteristic: organism

text: Methylophilaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-25: Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Opitutaceae bacterium

characteristic: project name

text: Opitutaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-27: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-28: Bacteria; Proteobacteria; Oligoflexia; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Bdellovibrionaceae bacterium

characteristic: project name

text: Bdellovibrionaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-29: Bacteria; Actinobacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Rhodoluna

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Microbacteriaceae bacterium

characteristic: organism

text: Microbacteriaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-30: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiales bacterium

characteristic: project name

characteristic: sample derived from

text: Burkholderiales bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-31: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Alcaligenaceae bacterium

characteristic: organism

text: Alcaligenaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-34: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Moraxellaceae bacterium

characteristic: project name

text: Moraxellaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-46: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Flavobacteriaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Flavobacteriaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-48: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-5: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Flavobacteriaceae bacterium

characteristic: organism

text: Flavobacteriaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-51: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Alcaligenaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Alcaligenaceae bacterium

text: multi-marker approach


characteristic: External Id

text: Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-56: Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Phenylobacterium aquaticum

characteristic: organism

text: Phenylobacterium aquaticum

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-57: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Flavobacteriaceae bacterium

characteristic: project name

text: Flavobacteriaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-59: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-60: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae; Flavipsychrobacter

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Flavipsychrobacter stenotrophus

characteristic: project name

text: Flavipsychrobacter stenotrophus

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-61: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Flavobacteriaceae bacterium

characteristic: organism

text: Flavobacteriaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-62: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Chitinophagaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Chitinophagaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-63: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-67: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiales bacterium

characteristic: project name

text: Burkholderiales bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-68: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-7: Bacteria; Actinobacteria; Actinobacteria

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Actinobacteria bacterium

characteristic: project name

text: Actinobacteria bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-70: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Beijerinckiaceae bacterium

characteristic: organism

text: Beijerinckiaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-71: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-72: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiaceae bacterium

characteristic: organism

text: Burkholderiaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-73: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Flavobacteriaceae bacterium

characteristic: project name

text: Flavobacteriaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-75: Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Cytophagaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Cytophagaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-76: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-78: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae; Flavipsychrobacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Flavipsychrobacter stenotrophus

characteristic: organism

text: Flavipsychrobacter stenotrophus

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-80: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Flavobacteriaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Flavobacteriaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-81: Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Methylophilaceae; Candidatus Methylopumilus

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Methylophilaceae bacterium

characteristic: organism

text: Methylophilaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-82: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-83: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Alcaligenaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Alcaligenaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-84: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Chitinophagaceae bacterium

characteristic: project name

text: Chitinophagaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-85: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Moraxellaceae bacterium

characteristic: organism

text: Moraxellaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-89: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-94: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiaceae bacterium

characteristic: organism

text: Burkholderiaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-95: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-96: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-B-240519-97: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Flavobacteriaceae bacterium

characteristic: project name

text: Flavobacteriaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-99: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiaceae bacterium

characteristic: organism

text: Burkholderiaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-C-240519-10: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiales bacterium

characteristic: project name

characteristic: sample derived from

text: Burkholderiales bacterium

text: multi-marker approach


characteristic: External Id

text: Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-C-240519-100: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-C-240519-101: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiaceae bacterium

characteristic: project name

text: Burkholderiaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-C-240519-105: Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Methylophilaceae; Methylotenera

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Methylophilaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Methylophilaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-C-240519-106: Bacteria

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: bacterium

characteristic: project name

text: bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-C-240519-108: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-C-240519-115: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiales bacterium

characteristic: project name

characteristic: sample derived from

text: Burkholderiales bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-C-240519-118: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Chitinophagaceae bacterium

characteristic: organism

text: Chitinophagaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-C-240519-120: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Flavobacteriaceae bacterium

characteristic: project name

text: Flavobacteriaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-C-240519-125: Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Methylophilaceae; Methylotenera

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Methylophilaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Methylophilaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-C-240519-127: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiales bacterium

characteristic: project name

text: Burkholderiales bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-C-240519-128: Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Acetobacteraceae bacterium

characteristic: organism

text: Acetobacteraceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-C-240519-134: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiales bacterium

characteristic: project name

characteristic: sample derived from

text: Burkholderiales bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-C-240519-135: Bacteria; Proteobacteria; Oligoflexia; Bdellovibrionales

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Bdellovibrionales bacterium

characteristic: organism

text: Bdellovibrionales bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-C-240519-136: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-C-240519-137: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Burkholderiaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-C-240519-138: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Flavobacteriaceae bacterium

characteristic: project name

text: Flavobacteriaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

text: Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-C-240519-14: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Chitinophagaceae bacterium

characteristic: organism

text: Chitinophagaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-C-240519-15: Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Verrucomicrobiales bacterium

characteristic: project name

characteristic: sample derived from

text: Verrucomicrobiales bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-C-240519-17: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiaceae bacterium

characteristic: organism

text: Burkholderiaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-C-240519-2: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-C-240519-22: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-C-240519-23: Bacteria; Candidatus Gracilibacteria

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Candidatus Gracilibacteria bacterium

characteristic: project name

text: Candidatus Gracilibacteria bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-C-240519-28: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae; Flavipsychrobacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Flavipsychrobacter stenotrophus

characteristic: organism

text: Flavipsychrobacter stenotrophus

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-C-240519-32: Bacteria; Proteobacteria; Oligoflexia; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Bdellovibrionaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Bdellovibrionaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-C-240519-36: Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobiaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Verrucomicrobiaceae bacterium

characteristic: organism

text: Verrucomicrobiaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-C-240519-37: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Alcaligenaceae bacterium

characteristic: project name

text: Alcaligenaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-C-240519-4: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-C-240519-40: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-C-240519-44: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-C-240519-45: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiales bacterium

characteristic: project name

characteristic: sample derived from

text: Burkholderiales bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-C-240519-46: Bacteria; Proteobacteria; Oligoflexia; Bacteriovoracales; Bacteriovoracaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Bacteriovoracaceae bacterium

characteristic: organism

text: Bacteriovoracaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-C-240519-49: Bacteria; Verrucomicrobia; Opitutae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Opitutae bacterium

characteristic: project name

text: Opitutae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-C-240519-50: Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Verrucomicrobia subdivision 3 bacterium

characteristic: organism

characteristic: sample derived from

text: Verrucomicrobia subdivision 3 bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-C-240519-54: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-C-240519-58: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiales bacterium

characteristic: organism

text: Burkholderiales bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-C-240519-62: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Burkholderiaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-C-240519-63: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Alcaligenaceae bacterium

characteristic: organism

text: Alcaligenaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-C-240519-64: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-C-240519-65: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiales bacterium

characteristic: organism

characteristic: sample derived from

text: Burkholderiales bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-C-240519-67: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker