characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region. Sequencing supported by RELECOV consortium, funded by the European Centre for Diseases Prevention and Control (ECDC) under Grant Agreement ECDC/HERA/2021/024 ECDC.12241

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

text: AND28528, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


status: PUBLIC

tag: attribute

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: ena-upload-cli

tag: Namespace:Clinical Bioinformatics Area

characteristic: Submitter Id

text: Servicio de Microbiologia, Hospital Universitario Virgen del Rocio, Sevilla, Spain

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status

text: AND28529, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

text: AND28530, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28531, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

text: Spain

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28532, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

text: AND28533, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28534, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: ena-upload-cli

text: not provided

text: Spain

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28535, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

text: AND28536, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28537, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

text: Spain

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28538, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

text: AND28539, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28540, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: ena-upload-cli

text: not provided

text: Spain

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28541, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: ena-upload-cli

text: Servicio de Microbiologia, Hospital Reina Sofia, Cordoba, Spain

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region. Sequencing supported by RELECOV consortium, funded by the European Centre for Diseases Prevention and Control (ECDC) under Grant Agreement ECDC/HERA/2021/024 ECDC.12241

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

text: AND28543, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: active surveillance in response to outbreak

text: AND28544, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

text: Spain

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28545, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

text: AND28546, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28547, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: ena-upload-cli

text: Servicio de Microbiologia, Complejo Hospitalario de Jaen, Jaen, Spain

text: not provided

text: Spain

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28548, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

text: AND28549, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28550, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

text: Spain

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28551, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

text: AND28552, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28553, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: ena-upload-cli

text: not provided

text: Spain

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28554, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: ena-upload-cli

text: Servicio de Microbiologia, Hospital Universitario Virgen del Rocio, Sevilla, Spain

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

text: AND28555, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

characteristic: collector name

text: Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region. Sequencing supported by RELECOV consortium, funded by the European Centre for Diseases Prevention and Control (ECDC) under Grant Agreement ECDC/HERA/2021/024 ECDC.12241

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28556, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

text: Spain

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status

text: AND28558, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: ena-upload-cli

text: Servicio Andaluz de Salud, Andalusia, Spain

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: not provided

text: not provided

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

text: AND28560, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28561, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: ena-upload-cli

text: not provided

text: Spain

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28563, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

text: AND28564, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28565, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

text: Spain

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28567, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

text: AND28568, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28571, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: ena-upload-cli

text: not provided

text: Spain

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28572, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

text: AND28573, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: Servicio de Microbiologia, Hospital Universitario Virgen del Rocio, Sevilla, Spain

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

text: AND28574, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

text: Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region. Sequencing supported by RELECOV consortium, funded by the European Centre for Diseases Prevention and Control (ECDC) under Grant Agreement ECDC/HERA/2021/024 ECDC.12241

text: Spain

characteristic: geographic location (longitude)

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28575, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

tag: Namespace:London School of Hygiene and Tropical Medicine

text: malaria parasite P. falciparum

characteristic: common name

text: Plasmodium falciparum drug resistance amplicons

text: Plasmodium falciparum

text: Plasmodium falciparum


text: London School of Hygiene and Tropical Medicine

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: malaria parasite P. falciparum

characteristic: description

text: Plasmodium falciparum

text: Plasmodium falciparum


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

tag: Namespace:Laboratory of Genomics and Bioinformatics, Comenius University Science Park

text: Science Park of Comenius University of Bratislava

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Slovakia

characteristic: geographic location (country and/or sea)

unit: year

characteristic: host age

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: RNA

text: Nasopharyngeal swab

characteristic: isolation source-host associated

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Laboratory of Genomics and Bioinformatics, Comenius University Science Park

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: Slovakia

text: Human

characteristic: host common name

text: not provided

text: Homo sapiens

text: female

text: RNA

characteristic: isolate

text: Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: common name

text: Slovakia

text: Human

text: not provided

text: Homo sapiens

text: male

text: RNA

text: Nasopharyngeal swab


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: not provided

text: Slovakia

characteristic: geographic location (country and/or sea)

unit: month

characteristic: host age

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: RNA

text: Nasopharyngeal swab

characteristic: isolation source-host associated


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not provided

text: Slovakia

text: Human

characteristic: host common name

text: not provided

text: Homo sapiens

text: female

text: RNA

characteristic: isolate

text: Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28576, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28577, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: Servicio Andaluz de Salud, Andalusia, Spain

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: not provided

text: not provided

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28578, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

text: Servicio de Microbiologia, Complejo Hospitalario Torrecardenas, Almeria, Spain

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28579, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28580, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

text: Servicio de Microbiologia, Hospital Reina Sofia, Cordoba, Spain

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28581, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: Servicio de Microbiologia, Hospital Universitario Virgen del Rocio, Sevilla, Spain

text: not provided

characteristic: collector name

text: Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region. Sequencing supported by RELECOV consortium, funded by the European Centre for Diseases Prevention and Control (ECDC) under Grant Agreement ECDC/HERA/2021/024 ECDC.12241

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28582, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28583, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28584, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28585, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: active surveillance in response to outbreak

text: AND28586, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28587, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28588, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28589, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28590, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28591, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28592, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28593, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28594, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: Servicio de Microbiologia, Hospital Juan Ramon Jimenez, Huelva, Spain

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28595, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region. Sequencing supported by RELECOV consortium, funded by the European Centre for Diseases Prevention and Control (ECDC) under Grant Agreement ECDC/HERA/2021/024 ECDC.12241

text: Spain

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28596, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28597, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28598, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28599, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: active surveillance in response to outbreak

text: AND28601, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28602, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28603, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28604, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28605, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

text: Servicio de Microbiologia, Hospital Universitario Virgen del Rocio, Sevilla, Spain

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28606, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28607, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28608, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28609, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28610, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region. Sequencing supported by RELECOV consortium, funded by the European Centre for Diseases Prevention and Control (ECDC) under Grant Agreement ECDC/HERA/2021/024 ECDC.12241

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28611, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28612, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: Servicio Andaluz de Salud, Andalusia, Spain

text: not provided

characteristic: collector name

characteristic: description

text: Spain

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28614, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: active surveillance in response to outbreak

text: AND28615, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28616, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28617, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28619, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28620, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: Servicio de Microbiologia, Hospital Universitario Virgen del Rocio, Sevilla, Spain

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28621, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28622, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28623, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28624, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: Servicio de Microbiologia, Hospital Puerta del Mar, Cadiz, Spain

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28625, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region. Sequencing supported by RELECOV consortium, funded by the European Centre for Diseases Prevention and Control (ECDC) under Grant Agreement ECDC/HERA/2021/024 ECDC.12241

text: Spain

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28626, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28627, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28628, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status

text: AND28629, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28630, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: Servicio Andaluz de Salud, Andalusia, Spain

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28631, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: not provided

text: not provided

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28632, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28633, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28634, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: not provided

text: not provided

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28635, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28636, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28637, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: not provided

text: not provided

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28638, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28639, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region. Sequencing supported by RELECOV consortium, funded by the European Centre for Diseases Prevention and Control (ECDC) under Grant Agreement ECDC/HERA/2021/024 ECDC.12241

text: Spain

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28640, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: Servicio de Microbiologia, Hospital Puerta del Mar, Cadiz, Spain

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28641, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: active surveillance in response to outbreak

text: AND28642, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28643, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28645, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28646, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28647, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28648, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28649, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: Servicio Andaluz de Salud, Andalusia, Spain

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28650, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28652, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: Servicio de Microbiologia, Hospital Juan Ramon Jimenez, Huelva, Spain

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28653, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: Servicio de Microbiologia, Hospital Universitario Virgen del Rocio, Sevilla, Spain

text: not provided

text: Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region. Sequencing supported by RELECOV consortium, funded by the European Centre for Diseases Prevention and Control (ECDC) under Grant Agreement ECDC/HERA/2021/024 ECDC.12241

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28656, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: Servicio de Microbiologia, Hospital Puerta del Mar, Cadiz, Spain

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28657, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: active surveillance in response to outbreak

text: AND28658, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28659, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28660, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28661, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28662, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28664, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28665, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: Servicio Andaluz de Salud, Andalusia, Spain

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28666, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-upload-cli

characteristic: collecting institution

characteristic: collection date

text: not provided

text: Spain

text: not provided

text: not provided

text: Human

characteristic: host common name

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

text: AND28667, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Clinical Bioinformatics Area

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-upload-cli

text: not provided

characteristic: collector name

characteristic: description

text: Spain

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Human

text: not provided

text: Homo Sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: AND28669, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Clinical Bioinformatics Area

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ena-upload-cli

characteristic: Submitter Id

text: not provided

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: AND28670, Severe acute respiratory syndrome coronavirus 2, WGS, Andalusia Region


E-MTAB-12442:Sample 1

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 1

tag: Namespace:Faculty of Veterinary Medicine, University of Helsinki

text: embryonic 18.5

unit: day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: Protocols: The dams were euthanized 18.5 days post coitum by cervical dislocation. Whole brain, intestine and placenta were collected from two fetuses per dam, to a total of 12 fetuses per experimental group. The fetal organ samples were immediately frozen in liquid nitrogen, stored at − 80 °C and transferred on dry ice to the research laboratory. Six pregnant germ-free (GF) and six specific pathogen free (SPF) C57BL/6 J dams were obtained from the EMMA Axenic Service at Instituto Gulbenkian de Ciência, Portugal. The GF dams were 3-4 months old and the SPF dams 4-5 months old. The GF and SPF statuses were regularly monitored by culture and 16S qPCR. All dams were fed identical RM3-A-P (Rat and Mouse No.3 Breeding Autoclavable) breeding diets (SDS Special Diet Services, Essex, UK), autoclaved at 121 °C. The SPF feed was autoclaved for 20 min and the GF feed for 30 min due to logistical reasons. Total RNA was extracted from fetal intestine, brain and placenta (one female fetus and one male fetus per dam) using the Qiagen RNeasy Mini Kit (Qiagen, Germany). The tissues were mechanically lysed by grinding with a plastic pestle (Bel-Art, PA) attached to an electric drill, and the protocol included the optional on-column DNAse digestion. Dual-indexed mRNA libraries were prepared from 150 ng of total RNA with QuantSeq 3’ mRNA-Seq Library Prep Kit FWD (Lexogen Gmbh, Vienna, Austria) according to user guide version 015UG009V0251. During second strand synthesis, 6 bp Unique Molecular Identifiers (UMI) were introduced with UMI Second Strand Synthesis Module (Lexogen Gmbh, Vienna, Austria) for detection and removal of PCR duplicates. Quality of the libraries was measured with LabChip GX Touch HT DNA High Sensitivity Reagent Kit (PerkinElmer, Waltham, MA, USA).

text: embryo

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: germ-free

characteristic: growth condition

text: dam GF-A / fetus 1

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: Sample 1


E-MTAB-12442:Sample 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Faculty of Veterinary Medicine, University of Helsinki

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 2

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: germ-free

text: dam GF-A / fetus 1

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: male

text: Sample 2

characteristic: title


E-MTAB-12442:Sample 3

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 3

text: embryonic 18.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: germ-free

text: dam GF-A / fetus 1

text: Mus musculus

text: Mus musculus

text: placenta

text: Mus musculus

text: male

text: Sample 3


E-MTAB-12442:Sample 4

text: public

text: E-MTAB-12442:Sample 4

text: embryonic 18.5

text: ArrayExpress

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: germ-free

characteristic: growth condition

text: dam GF-A / fetus 2

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

characteristic: organism part

text: Mus musculus

text: female

characteristic: sex

characteristic: strain

text: Sample 4


E-MTAB-12442:Sample 5

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 5

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: germ-free

text: dam GF-A / fetus 2

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: female

text: Sample 5

characteristic: title


E-MTAB-12442:Sample 6

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 6

text: embryonic 18.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryo

characteristic: developmental stage

text: normal

text: wild type genotype

text: germ-free

text: dam GF-A / fetus 2

text: Mus musculus

text: Mus musculus

text: placenta

text: Mus musculus

text: female

text: Sample 6


E-MTAB-12442:Sample 7

text: public

text: E-MTAB-12442:Sample 7

text: embryonic 18.5

text: ArrayExpress

text: house mouse

text: embryo

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: germ-free

characteristic: growth condition

text: dam GF-B / fetus 1

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

characteristic: organism part

text: outlier, likely head tissue included

characteristic: sampling site

text: Mus musculus

text: female

characteristic: sex

characteristic: strain

text: Sample 7


E-MTAB-12442:Sample 8

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-12442:Sample 8

characteristic: Submitter Id

text: embryonic 18.5

text: ArrayExpress

text: house mouse

characteristic: description

text: embryo

text: normal

text: wild type genotype

text: germ-free

text: dam GF-B / fetus 1

text: Mus musculus

text: Mus musculus

text: intestine

text: Mus musculus

text: female

text: Sample 8

characteristic: title


E-MTAB-12442:Sample 9

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12442:Sample 9

text: embryonic 18.5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: embryo

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: germ-free

text: dam GF-B / fetus 1

text: Mus musculus

text: Mus musculus

text: placenta

text: Mus musculus

text: female

text: Sample 9


E-MTAB-12442:Sample 10

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-12442:Sample 10

text: embryonic 18.5

text: ArrayExpress

text: house mouse

text: embryo

text: normal

text: wild type genotype

text: germ-free

characteristic: growth condition

text: dam GF-B / fetus 3

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: Sample 10