characteristic: ENA-LAST-UPDATE

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text: MBL-IPC

text: Salmonella�enterica�subsp.�enterica�serovar Paratyphi A isolate RES21-0040

characteristic: description

text: Salmonella

text: Cambodia

text: Homo sapiens

text: diseased

text: Homo sapiens

text: Human clinical sample

text: 11.580543, 104.916724

text: Paratyphi A

characteristic: title

value: broth dilution

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value: Salmonella enterica

value: cefixime


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

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text: Salmonella�enterica�subsp.�enterica�serovar Paratyphi A isolate RES21-0041

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characteristic: genus

text: Cambodia

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host

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characteristic: host scientific name

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characteristic: organism

text: Paratyphi A

characteristic: serovar

text: Salmonella enterica subsp. enterica serovar Paratyphi A isolate

type: AMR curated data - CABBAGE

value: trimethoprim-sulfamethoxazole

value: pefloxacin

value: disk diffusion

value: mm

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value: chloramphenicol

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characteristic: ENA-LAST-UPDATE

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text: Salmonella�enterica�subsp.�enterica�serovar Paratyphi A isolate RES21-0043

characteristic: description

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text: Salmonella enterica subsp. enterica serovar Paratyphi A

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characteristic: title

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characteristic: ENA-CHECKLIST

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text: Salmonella�enterica�subsp.�enterica�serovar Paratyphi A isolate RES21-0044

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value: trimethoprim-sulfamethoxazole

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text: Institut Pasteur du Cambodge

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characteristic: SRA accession

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value: ceftazidime

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text: Institut Pasteur du Cambodge

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text: Salmonella�enterica�subsp.�enterica�serovar Paratyphi A isolate RES21-0047

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characteristic: host

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characteristic: ENA-LAST-UPDATE

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text: Salmonella�enterica�subsp.�enterica�serovar Paratyphi A isolate RES21-0050

characteristic: description

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characteristic: serovar

value: ampicillin

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characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: Institut Pasteur du Cambodge

characteristic: INSDC center name

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text: Salmonella�enterica�subsp.�enterica�serovar Paratyphi A isolate RES21-0051

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characteristic: title

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text: Institut Pasteur du Cambodge

characteristic: INSDC first public

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characteristic: SRA accession

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text: Salmonella�enterica�subsp.�enterica�serovar Paratyphi A isolate RES21-0052

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value: trimethoprim-sulfamethoxazole

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text: Institut Pasteur du Cambodge

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text: Salmonella�enterica�subsp.�enterica�serovar Paratyphi A isolate RES21-0053

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tag: Namespace:NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE

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text: hCoV-19/Switzerland/SZ-Risch-1011R14174/2022

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism


characteristic: GISAID Accession ID

text: Dr. Risch

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-Risch-1010R14192/2022

text: active surveillance in response to outbreak

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Dr. Risch

text: public

text: SIB

text: Switzerland

text: AR

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/AR-Risch-1020R14179/2022

characteristic: sample capture status

text: active surveillance not initiated by an outbreak


characteristic: GISAID Accession ID

text: Dr. Risch

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Labormedizinisches Zentrum Dr. Risch, Liebefeld, Switzerland

text: Switzerland

text: AG

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/AG-Risch-1022R14120/2022

characteristic: isolate

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Dr. Risch

text: public

text: SIB

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: SG

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/SG-Risch-1017R14144/2022

characteristic: title


characteristic: GISAID Accession ID

text: Dr. Risch

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Switzerland

text: NW

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/NW-Risch-1010R14159/2022

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Dr. Risch

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-Risch-1021R14121/2022

characteristic: isolate

characteristic: organism


characteristic: GISAID Accession ID

text: Dr. Risch

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: SG

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/SG-Risch-1011R14132/2022

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Dr. Risch

text: public

text: SIB

text: Dr. Risch Ostschweiz AG, Lagerstrasse 30, 9470 Buchs

text: Switzerland

text: VD

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-Risch-1011R14158/2022

characteristic: sample capture status


characteristic: GISAID Accession ID

text: Dr. Risch

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text: public

characteristic: INSDC status

characteristic: SRA accession

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text: SIB

characteristic: broker name

text: Nadia Wohlwend, Faina Wehrli, Dominique Fabien Hilti, Sinem Kas, Martin Risch, Thomas Bodmer, Lorenz Risch

text: Liechtenstein

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Liechtenstein/FL-Risch-1010R14137/2022

characteristic: isolate

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Dr. Risch

text: public

text: SIB

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GR

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GR-Risch-1018R14147/2022

characteristic: title


characteristic: GISAID Accession ID

text: Dr. Risch

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Switzerland

text: BE

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-Risch-1011R14135/2022

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Dr. Risch

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-Risch-1012R14134/2022

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism


characteristic: GISAID Accession ID

text: Dr. Risch

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: SO

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/SO-Risch-1003R14116/2022

text: active surveillance in response to outbreak

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE

text: public

characteristic: TITLE

text: Listeria monocytogenes

characteristic: common name

text: Listeria monocytogenes

text: Listeria monocytogenes


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Tree of Life Programme

characteristic: Submitter Id

text: ABIGAIL JACKSON

text: Brigham Young University

unit: m

characteristic: depth

characteristic: elevation

text: Antarctica

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Victoria Land | Hallett Peninsula | Cape Hallett

text: cold desert soil consisting of predominantly coarse sand, low carbon, and high soil salinity

characteristic: habitat

text: Abigail Jackson

text: Brigham Young University

text: adult

characteristic: lifestage

text: Geomonhystera antarcticola

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

characteristic: project name

text: Geomonhystera antarcticola

text: NOT COLLECTED

characteristic: sex

text: NOT PROVIDED

text: N

characteristic: symbiont

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ABIGAIL JACKSON

text: Brigham Young University

characteristic: collecting institution

characteristic: collection date

text: Antarctica

characteristic: geographic location (country and/or sea)

text: Victoria Land | Ross Island | Cape Royds

characteristic: geographic location (region and locality)

text: cold desert soil consisting of predominantly coarse sand, low carbon, and high soil salinity, near penguin rookery

text: Abigail Jackson

text: Brigham Young University

text: adult

text: Panagrolaimus davidi

text: WHOLE ORGANISM

text: ToL

text: Panagrolaimus davidi

text: NOT COLLECTED

text: NOT PROVIDED

text: N

characteristic: title


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ABIGAIL JACKSON

text: Brigham Young University

characteristic: depth

characteristic: elevation

text: Antarctica

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Victoria Land | McMurdo Dry Valleys | Taylor Valley | Lake Hoare

characteristic: habitat

text: Abigail Jackson

text: Brigham Young University

text: adult

characteristic: lifestage

text: Eudorylaimus antarcticus

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

text: Eudorylaimus antarcticus

text: NOT COLLECTED

text: NOT PROVIDED

text: N


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ABIGAIL JACKSON

text: Brigham Young University

characteristic: collecting institution

text: Antarctica

text: McMurdo Dry Valleys | Taylor Valley | Lake Hoare

text: Abigail Jackson

text: Brigham Young University

text: adult

text: Eudorylaimus antarcticus

text: WHOLE ORGANISM

text: ToL

characteristic: project name

text: Eudorylaimus antarcticus

text: NOT COLLECTED

characteristic: sex

text: NOT PROVIDED

text: N

characteristic: symbiont

characteristic: tolid


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ABIGAIL JACKSON

text: Brigham Young University

characteristic: collection date

characteristic: depth

characteristic: elevation

text: Antarctica

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Abigail Jackson

text: Brigham Young University

text: adult

text: Scottnema lindsayae

text: WHOLE ORGANISM

text: ToL

text: Scottnema lindsayae

text: NOT COLLECTED

text: NOT PROVIDED

text: N

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ABIGAIL JACKSON

text: Brigham Young University

characteristic: collecting institution

text: Antarctica

characteristic: habitat

text: Abigail Jackson

text: Brigham Young University

text: adult

characteristic: lifestage

text: Geomonhystera antarcticola

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

characteristic: sample same as

text: Geomonhystera antarcticola

text: NOT COLLECTED

text: NOT PROVIDED

text: N


text: Sanger Institute

characteristic: GAL

text: Tree of Life Programme

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ABIGAIL JACKSON

text: Brigham Young University

characteristic: collection date

characteristic: depth

characteristic: elevation

text: Antarctica

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Abigail Jackson

text: Brigham Young University

text: adult

text: Panagrolaimus davidi

text: WHOLE ORGANISM

characteristic: project name

text: Panagrolaimus davidi

text: NOT COLLECTED

characteristic: sex

text: NOT PROVIDED

text: N

characteristic: symbiont

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ABIGAIL JACKSON

text: Brigham Young University

characteristic: collecting institution

text: Antarctica

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

characteristic: habitat

text: Abigail Jackson

text: Brigham Young University

text: adult

characteristic: lifestage

text: Eudorylaimus antarcticus

text: WHOLE ORGANISM

text: Eudorylaimus antarcticus

text: NOT COLLECTED

text: NOT PROVIDED

text: N

characteristic: title


text: Sanger Institute

characteristic: GAL

text: Tree of Life Programme

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ABIGAIL JACKSON

text: Brigham Young University

characteristic: collection date

characteristic: depth

characteristic: elevation

text: Antarctica

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Abigail Jackson

text: Brigham Young University

text: adult

text: Eudorylaimus antarcticus

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

characteristic: project name

characteristic: sample same as

text: Eudorylaimus antarcticus

text: NOT COLLECTED

text: NOT PROVIDED

text: N


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ABIGAIL JACKSON

text: Brigham Young University

characteristic: collecting institution

text: Antarctica

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Abigail Jackson

text: Brigham Young University

text: adult

text: Scottnema lindsayae

text: WHOLE ORGANISM

text: Scottnema lindsayae

text: NOT COLLECTED

characteristic: sex

text: NOT PROVIDED

text: N

characteristic: symbiont

characteristic: tolid


text: Universite de Strasbourg

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Universite de Strasbourg

characteristic: Submitter Id

text: Exponential phase culture of strain MD1 grown with metformin (replicate 1)

characteristic: description

text: Aminobacter niigataensis

characteristic: organism

text: Aminobacter niigataensis

text: RNASeq of Aminobacter niigataensis strain MD1, metformin condition, replicate 1

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Universite de Strasbourg

text: public

text: Exponential phase culture of strain MD1 grown with metformin (replicate 2)

text: Aminobacter niigataensis

text: Aminobacter niigataensis

text: RNASeq of Aminobacter niigataensis strain MD1, metformin condition, replicate 2


characteristic: External Id

text: Universite de Strasbourg

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Exponential phase culture of strain MD1 grown with metformin (replicate 3)

text: Aminobacter niigataensis

text: Aminobacter niigataensis

text: RNASeq of Aminobacter niigataensis strain MD1, metformin condition, replicate 3


text: Universite de Strasbourg

characteristic: INSDC last update

text: public

text: Exponential phase culture of strain MD1 grown with dimethylamine (replicate 1)

text: Aminobacter niigataensis

text: Aminobacter niigataensis

text: RNASeq of Aminobacter niigataensis strain MD1, dimethylamine condition, replicate 1


text: Universite de Strasbourg

text: public

text: Exponential phase culture of strain MD1 grown with dimethylamine (replicate 2)

text: Aminobacter niigataensis

text: Aminobacter niigataensis

text: RNASeq of Aminobacter niigataensis strain MD1, dimethylamine condition, replicate 2


text: Universite de Strasbourg

text: public

text: Exponential phase culture of strain MD1 grown with dimethylamine (replicate 3)

text: Aminobacter niigataensis

text: Aminobacter niigataensis

text: RNASeq of Aminobacter niigataensis strain MD1, dimethylamine condition, replicate 3


text: Universite de Strasbourg

text: public

text: Exponential phase culture of strain MD1 grown with sucrose (replicate 1)

text: Aminobacter niigataensis

text: Aminobacter niigataensis

text: RNASeq of Aminobacter niigataensis strain MD1, sucrose condition, replicate 1


text: Universite de Strasbourg

text: public

text: Exponential phase culture of strain MD1 grown with sucrose (replicate 2)

text: Aminobacter niigataensis

text: Aminobacter niigataensis

text: RNASeq of Aminobacter niigataensis strain MD1, sucrose condition, replicate 2


text: Universite de Strasbourg

text: public

text: Exponential phase culture of strain MD1 grown with sucrose (replicate 3)

text: Aminobacter niigataensis

text: Aminobacter niigataensis

text: RNASeq of Aminobacter niigataensis strain MD1, sucrose condition, replicate 3


text: Universite de Strasbourg

text: public

text: Complete genome sequence of Aminobacter niigataensis strain MD1 isolated from wastewater sludge, raw reads Pacbio

text: Aminobacter niigataensis

text: Aminobacter niigataensis

characteristic: strain

text: Aminobacter niigataensis strain MD1, raw reads Illumina


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: NOT COLLECTED

characteristic: barcoding center

text: COPO

characteristic: broker name

text: JP Koene|CE Adams

text: Univ Glasgow

characteristic: collecting institution

characteristic: collection date

text: common whitefish

characteristic: common name

text: 2022-05-07 00:00:00

characteristic: depth

characteristic: elevation

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Scotland | Loch Lomond | RossPoint

characteristic: geographic location (region and locality)

text: lake

characteristic: habitat

text: PETER KOENE | COLIN ADAMS

text: Univ Glasgow

text: adult

characteristic: lifestage

text: Coregonus lavaretus

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

text: caught with 30m x 1.5m benthic gill net with 28mm (knot-to-knot) mesh

characteristic: sample collection device or method

text: Coregonus lavaretus

text: MALE

characteristic: sex

text: c3932eb5-41ac-4f23-b4f5-9dee8391af8c-DTOL-specimen

type: derived from


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOT COLLECTED

characteristic: barcoding center

text: COPO

text: K Elmer|J Smout

text: Univ Glasgow

text: common lizard

text: United Kingdom

text: Scotland | Great Cumbrae | Roadside near Skate Bay

text: terrestrial roadside grasses and rock wall

text: KATHRYN ELMER | JOHN SMOUT

text: Univ Glasgow

text: adult

text: Zootoca vivipara

characteristic: organism

text: WHOLE ORGANISM

text: DTOL

text: caught by hand

text: Zootoca vivipara

text: FEMALE

text: c27c1114-b814-4e43-9743-894d68871772-DTOL-specimen

characteristic: title

characteristic: tolid


text: Sanger Institute

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: NOT COLLECTED

text: COPO

characteristic: broker name

text: K Elmer|J Smout

text: Univ Glasgow

characteristic: collecting institution

characteristic: collection date

text: common lizard

characteristic: common name

characteristic: elevation

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

characteristic: habitat

text: KATHRYN ELMER | JOHN SMOUT

text: Univ Glasgow

text: adult

characteristic: lifestage

text: Zootoca vivipara

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

text: caught by hand

characteristic: sample collection device or method

text: Zootoca vivipara

text: MALE

text: d34250d0-0715-4930-a101-76291c682575-DTOL-specimen


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOT COLLECTED

characteristic: barcoding center

text: COPO

text: A Jacobs

text: Univ Glasgow

text: European river lamprey

characteristic: depth

text: United Kingdom

text: Scotland | Loch Lomond region | Endrick Water

text: small river

text: ARNE JACOBS | COLIN ADAMS

text: Univ Glasgow

text: adult

text: Lampetra fluviatilis

characteristic: organism

text: WHOLE ORGANISM

text: DTOL

text: smolt trap

text: Lampetra fluviatilis

text: FEMALE

characteristic: sex

text: 859a0a51-a615-47d7-8d73-eed60e76caf9-DTOL-specimen


text: Sanger Institute

text: Tree of Life Programme

text: public

text: LUDWIK GASIOROWSKI

text: MAX PLANCK INSTITUTE FOR BIOPHYSICAL CHEMISTRY

characteristic: collecting institution

characteristic: collection date

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Göttingen | artificial cultures of Stenostomum brevipharyngium

characteristic: geographic location (region and locality)

text: laboratory cultures

characteristic: habitat

text: LUDWIK GASIOROWSKI

text: adult

characteristic: lifestage

text: Stenostomum brevipharyngium

text: MULTICELLULAR ORGANISMS IN CULTURE

characteristic: organism part

characteristic: project name

characteristic: sample derived from

text: Stenostomum brevipharyngium

text: HERMAPHRODITE MONOECIOUS

text: N

characteristic: symbiont

characteristic: title

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metawrap v1.3

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR17120546 of study SRP349161.

characteristic: description

text: feces

characteristic: environmental medium

text: China

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: digestive tube

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Porphyromonadaceae bacterium

text: Metagenomic sequencing

text: uncultured Porphyromonadaceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17120546_bin.10_metawrap_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

text: metawrap v1.3

text: mouse digestive system

text: EBI-EMG

characteristic: collection date

text: CheckM

text: feces

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: mouse gut metagenome

text: digestive tube

text: mouse gut metagenome

text: uncultured Porphyromonadaceae bacterium

characteristic: organism

text: Metagenomic sequencing

characteristic: project name

characteristic: sample derived from

text: uncultured Porphyromonadaceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR17120546_bin.14_metawrap_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metawrap v1.3

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: China

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: digestive tube

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Porphyromonadaceae bacterium

text: Metagenomic sequencing

text: uncultured Porphyromonadaceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17120546_bin.15_metawrap_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

text: metawrap v1.3

text: mouse digestive system

text: EBI-EMG

characteristic: collection date

text: CheckM

text: feces

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: mouse gut metagenome

text: digestive tube

text: mouse gut metagenome

text: Bacteroides acidifaciens

characteristic: organism

text: Metagenomic sequencing

characteristic: project name

characteristic: sample derived from

text: Bacteroides acidifaciens

text: Illumina HiSeq 4000

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides acidifaciens

text: multi-marker approach

text: Metagenome-assembled genome: SRR17120546_bin.16_metawrap_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metawrap v1.3

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: China

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: digestive tube

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Prevotella sp.

text: Metagenomic sequencing

text: uncultured Prevotella sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17120546_bin.17_metawrap_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

text: metawrap v1.3

text: mouse digestive system

text: EBI-EMG

characteristic: collection date

text: CheckM

text: feces

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: mouse gut metagenome

text: digestive tube

text: mouse gut metagenome

text: uncultured Muribaculaceae bacterium

characteristic: organism

text: Metagenomic sequencing

characteristic: project name

characteristic: sample derived from

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 4000

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR17120546_bin.19_metawrap_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metawrap v1.3

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: China

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: digestive tube

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Porphyromonadaceae bacterium

text: Metagenomic sequencing

text: uncultured Porphyromonadaceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17120546_bin.24_metawrap_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

text: metawrap v1.3

text: mouse digestive system

text: EBI-EMG

characteristic: collection date

text: CheckM

text: feces

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: mouse gut metagenome

text: digestive tube

text: mouse gut metagenome

text: uncultured Porphyromonadaceae bacterium

characteristic: organism

text: Metagenomic sequencing

characteristic: project name

characteristic: sample derived from

text: uncultured Porphyromonadaceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR17120546_bin.28_metawrap_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metawrap v1.3

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: China

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: digestive tube

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

text: Metagenomic sequencing

text: uncultured Bacteroidales bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17120546_bin.30_metawrap_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

text: metawrap v1.3

text: mouse digestive system

text: EBI-EMG

characteristic: collection date

text: CheckM

text: feces

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: mouse gut metagenome

text: digestive tube

text: mouse gut metagenome

text: uncultured Porphyromonadaceae bacterium

characteristic: organism

text: Metagenomic sequencing

characteristic: project name

characteristic: sample derived from

text: uncultured Porphyromonadaceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR17120546_bin.32_metawrap_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metawrap v1.3

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR17120546 of study SRP349161.

characteristic: description

text: feces

characteristic: environmental medium

text: China

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: digestive tube

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Porphyromonadaceae bacterium

text: Metagenomic sequencing

text: uncultured Porphyromonadaceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17120546_bin.7_metawrap_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

text: metawrap v1.3

text: mouse digestive system

text: EBI-EMG

characteristic: collection date

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR17120547 of study SRP349161.

text: feces

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: mouse gut metagenome

text: digestive tube

text: mouse gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: Metagenomic sequencing

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 4000

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR17120547_bin.11_metawrap_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metawrap v1.3

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: China

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: digestive tube

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnoclostridium sp.

text: Metagenomic sequencing

text: uncultured Lachnoclostridium sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Lachnoclostridium;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17120547_bin.12_metawrap_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

text: metawrap v1.3

text: mouse digestive system

text: EBI-EMG

characteristic: collection date

text: CheckM

text: feces

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: mouse gut metagenome

text: digestive tube

text: mouse gut metagenome

text: uncultured Helicobacter sp.

characteristic: organism

text: Metagenomic sequencing

characteristic: project name

characteristic: sample derived from

text: uncultured Helicobacter sp.

text: Illumina HiSeq 4000

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR17120547_bin.16_metawrap_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metawrap v1.3

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: China

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: digestive tube

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnoclostridium sp.

text: Metagenomic sequencing

text: uncultured Lachnoclostridium sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17120547_bin.19_metawrap_v1.3_MAG