E-MTAB-11164:Sample 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11164:Sample 2

text: ArrayExpress

text: narrow-leaved blue lupine

characteristic: common name

characteristic: description

text: seedling development stage

characteristic: developmental stage

characteristic: ecotype

text: wild type genotype

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose susceptible

text: Lupinus angustifolius

text: Sample 2


E-MTAB-11164:Sample 20

status: PUBLIC

tag: attribute

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11164:Sample 20

tag: Namespace:Department of Biometry and Bioinformatics, Institute of Plant Genetics, Polish Academy of Sciences

characteristic: Submitter Id

unit: day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: narrow-leaved blue lupine

text: Protocols: Leaves were sampled at 6, 12, 24, 36, and 48 hours post inoculation. Experiment was performed in controlled environment (a greenhouse), in temperature regime 21 °C day / 19 °C night and under 14 h photoperiod. Seeds were scarified before sowing to brake seed dormancy resulting from hard seed coat and provide even germination. Pots (11 cm × 11 cm × 21 cm) with sterilized soil were used. The inoculation was done using Colletotrichum lupini strain Col-08, obtained in 1999 from the stem of narrow-leafed lupin plants cultivated on field in Wierzenica (52°27′42″N 17°04′05″E) in Great Poland region. The isolate was cultured on SNA medium for 21 days at 20°C under black light to induce sporulation. The inoculation was performed 4 weeks after sowing, when the plants reached 4-6 leaf stage, by spraying of conidial spore suspension in concentration 0,5 x 106 conidia per ml. After inoculation, plants were kept for 24 hours in darkness under ~100% humidity and temperature of 25°C to facilitate conidia germination and infection process. Afterwards, plants were grown under 14-h photoperiod in temperature regime 22°C day / 19°C night and humidity ~70%. Frozen leaf tissue (50 mg) was homogenized in 2 ml tubes (Eppendorf, Hamburg, Germany) and two stainless steel beads (ø 5 mm) using TissueLyser II (Qiagen). SV Total RNA Isolation System (Promega, Madison, WI, USA) was used for RNA isolation without any changes to the protocol except extending DNAse I digestion to 25 min. RNA purity and integrity of the samples prepared for sequencing were measured using an Experion™ Automated Electrophoresis System (Bio-Rad, Hercules, CA, USA). TruSeq RNA Sample Preparation v2 Guide, Part # 15026495 Rev. F

text: seedling development stage

text: wild type genotype

characteristic: genotype

text: Lupinus angustifolius

characteristic: organism

text: Lupinus angustifolius

text: leaf

characteristic: organism part

text: anthracnose susceptible

characteristic: phenotype

characteristic: replicate

text: Lupinus angustifolius

text: Sample 20

characteristic: title


E-MTAB-11164:Sample 21

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Department of Biometry and Bioinformatics, Institute of Plant Genetics, Polish Academy of Sciences

text: public

text: E-MTAB-11164:Sample 21

text: ArrayExpress

text: narrow-leaved blue lupine

characteristic: common name

characteristic: description

text: seedling development stage

characteristic: developmental stage

characteristic: ecotype

text: wild type genotype

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose susceptible

text: Lupinus angustifolius

text: Sample 21


E-MTAB-11164:Sample 22

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11164:Sample 22

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: wild type genotype

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose susceptible

text: Lupinus angustifolius

text: Sample 22


E-MTAB-11164:Sample 23

text: public

characteristic: SRA accession

text: E-MTAB-11164:Sample 23

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: narrow-leaved blue lupine

text: seedling development stage

text: wild type genotype

characteristic: genotype

text: Lupinus angustifolius

characteristic: organism

text: Lupinus angustifolius

text: leaf

text: anthracnose susceptible

text: Lupinus angustifolius

text: Sample 23


E-MTAB-11164:Sample 24

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11164:Sample 24

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: wild type genotype

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

characteristic: organism part

text: anthracnose susceptible

characteristic: phenotype

characteristic: replicate

text: Lupinus angustifolius

text: Sample 24

characteristic: title


E-MTAB-11164:Sample 25

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11164:Sample 25

text: ArrayExpress

text: narrow-leaved blue lupine

characteristic: common name

characteristic: description

text: seedling development stage

characteristic: developmental stage

text: Mandelup

characteristic: ecotype

text: AnMan allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 25


E-MTAB-11164:Sample 26

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11164:Sample 26

characteristic: Submitter Id

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Mandelup

text: AnMan allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 26


E-MTAB-11164:Sample 27

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11164:Sample 27

characteristic: age

text: ArrayExpress

characteristic: broker name

text: narrow-leaved blue lupine

text: seedling development stage

text: Mandelup

text: AnMan allele

characteristic: genotype

text: Lupinus angustifolius

characteristic: organism

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 27


E-MTAB-11164:Sample 28

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11164:Sample 28

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Mandelup

text: AnMan allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

characteristic: organism part

text: anthracnose resistant

characteristic: phenotype

characteristic: replicate

text: Lupinus angustifolius

text: Sample 28

characteristic: title


E-MTAB-11164:Sample 29

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11164:Sample 29

text: ArrayExpress

text: narrow-leaved blue lupine

characteristic: common name

characteristic: description

text: seedling development stage

characteristic: developmental stage

text: Mandelup

characteristic: ecotype

text: AnMan allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 29


E-MTAB-11164:Sample 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11164:Sample 3

characteristic: Submitter Id

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: wild type genotype

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose susceptible

text: Lupinus angustifolius

text: Sample 3


E-MTAB-11164:Sample 30

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11164:Sample 30

characteristic: age

text: ArrayExpress

characteristic: broker name

text: narrow-leaved blue lupine

text: seedling development stage

text: Mandelup

text: AnMan allele

characteristic: genotype

text: Lupinus angustifolius

characteristic: organism

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 30


E-MTAB-11164:Sample 31

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11164:Sample 31

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Mandelup

text: AnMan allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

characteristic: organism part

text: anthracnose resistant

characteristic: phenotype

characteristic: replicate

text: Lupinus angustifolius

text: Sample 31

characteristic: title


E-MTAB-11164:Sample 32

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11164:Sample 32

text: ArrayExpress

text: narrow-leaved blue lupine

characteristic: common name

characteristic: description

text: seedling development stage

characteristic: developmental stage

text: Mandelup

characteristic: ecotype

text: AnMan allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 32


E-MTAB-11164:Sample 33

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11164:Sample 33

characteristic: Submitter Id

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Mandelup

text: AnMan allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 33


E-MTAB-11164:Sample 34

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11164:Sample 34

characteristic: age

text: ArrayExpress

characteristic: broker name

text: narrow-leaved blue lupine

text: seedling development stage

text: Mandelup

text: AnMan allele

characteristic: genotype

text: Lupinus angustifolius

characteristic: organism

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 34


E-MTAB-11164:Sample 35

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11164:Sample 35

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Mandelup

text: AnMan allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

characteristic: organism part

text: anthracnose resistant

characteristic: phenotype

characteristic: replicate

text: Lupinus angustifolius

text: Sample 35

characteristic: title


E-MTAB-11164:Sample 36

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11164:Sample 36

text: ArrayExpress

text: narrow-leaved blue lupine

characteristic: common name

characteristic: description

text: seedling development stage

characteristic: developmental stage

text: Mandelup

characteristic: ecotype

text: AnMan allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 36


E-MTAB-11164:Sample 37

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11164:Sample 37

characteristic: Submitter Id

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Mandelup

text: AnMan allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 37


E-MTAB-11164:Sample 38

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11164:Sample 38

characteristic: age

text: ArrayExpress

characteristic: broker name

text: narrow-leaved blue lupine

text: seedling development stage

text: Mandelup

text: AnMan allele

characteristic: genotype

text: Lupinus angustifolius

characteristic: organism

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 38


E-MTAB-11164:Sample 39

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11164:Sample 39

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Mandelup

text: AnMan allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

characteristic: organism part

text: anthracnose resistant

characteristic: phenotype

characteristic: replicate

text: Lupinus angustifolius

text: Sample 39

characteristic: title


E-MTAB-11164:Sample 4

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11164:Sample 4

text: ArrayExpress

text: narrow-leaved blue lupine

characteristic: common name

characteristic: description

text: seedling development stage

characteristic: developmental stage

characteristic: ecotype

text: wild type genotype

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose susceptible

text: Lupinus angustifolius

text: Sample 4


E-MTAB-11164:Sample 40

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11164:Sample 40

characteristic: Submitter Id

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Mandelup

text: AnMan allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 40


E-MTAB-11164:Sample 41

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11164:Sample 41

characteristic: age

text: ArrayExpress

characteristic: broker name

text: narrow-leaved blue lupine

text: seedling development stage

text: Mandelup

text: AnMan allele

characteristic: genotype

text: Lupinus angustifolius

characteristic: organism

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 41


E-MTAB-11164:Sample 42

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11164:Sample 42

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Mandelup

text: AnMan allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

characteristic: organism part

text: anthracnose resistant

characteristic: phenotype

characteristic: replicate

text: Lupinus angustifolius

text: Sample 42

characteristic: title


E-MTAB-11164:Sample 43

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11164:Sample 43

text: ArrayExpress

text: narrow-leaved blue lupine

characteristic: common name

characteristic: description

text: seedling development stage

characteristic: developmental stage

text: Mandelup

characteristic: ecotype

text: AnMan allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 43


E-MTAB-11164:Sample 44

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11164:Sample 44

characteristic: Submitter Id

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Mandelup

text: AnMan allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 44


E-MTAB-11164:Sample 45

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11164:Sample 45

characteristic: age

text: ArrayExpress

characteristic: broker name

text: narrow-leaved blue lupine

text: seedling development stage

text: Mandelup

text: AnMan allele

characteristic: genotype

text: Lupinus angustifolius

characteristic: organism

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 45


E-MTAB-11164:Sample 46

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11164:Sample 46

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Mandelup

text: AnMan allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

characteristic: organism part

text: anthracnose resistant

characteristic: phenotype

characteristic: replicate

text: Lupinus angustifolius

text: Sample 46

characteristic: title


E-MTAB-11164:Sample 47

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11164:Sample 47

text: ArrayExpress

text: narrow-leaved blue lupine

characteristic: common name

characteristic: description

text: seedling development stage

characteristic: developmental stage

text: Mandelup

characteristic: ecotype

text: AnMan allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 47


E-MTAB-11164:Sample 48

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11164:Sample 48

characteristic: Submitter Id

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Mandelup

text: AnMan allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 48


E-MTAB-11164:Sample 49

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11164:Sample 49

characteristic: age

text: ArrayExpress

characteristic: broker name

text: narrow-leaved blue lupine

text: seedling development stage

text: Lanr1 allele

characteristic: genotype

text: Lupinus angustifolius

characteristic: organism

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 49


E-MTAB-11164:Sample 5

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11164:Sample 5

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: wild type genotype

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

characteristic: organism part

text: anthracnose susceptible

characteristic: phenotype

characteristic: replicate

text: Lupinus angustifolius

text: Sample 5

characteristic: title


E-MTAB-11164:Sample 50

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11164:Sample 50

text: ArrayExpress

text: narrow-leaved blue lupine

characteristic: common name

characteristic: description

text: seedling development stage

characteristic: developmental stage

characteristic: ecotype

text: Lanr1 allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 50


E-MTAB-11164:Sample 51

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11164:Sample 51

characteristic: Submitter Id

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Lanr1 allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 51


E-MTAB-11164:Sample 52

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11164:Sample 52

characteristic: age

text: ArrayExpress

characteristic: broker name

text: narrow-leaved blue lupine

text: seedling development stage

text: Lanr1 allele

characteristic: genotype

text: Lupinus angustifolius

characteristic: organism

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 52


E-MTAB-11164:Sample 53

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11164:Sample 53

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Lanr1 allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

characteristic: organism part

text: anthracnose resistant

characteristic: phenotype

characteristic: replicate

text: Lupinus angustifolius

text: Sample 53

characteristic: title


E-MTAB-11164:Sample 54

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11164:Sample 54

text: ArrayExpress

text: narrow-leaved blue lupine

characteristic: common name

characteristic: description

text: seedling development stage

characteristic: developmental stage

characteristic: ecotype

text: Lanr1 allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 54


E-MTAB-11164:Sample 55

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11164:Sample 55

characteristic: Submitter Id

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Lanr1 allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 55


E-MTAB-11164:Sample 56

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11164:Sample 56

characteristic: age

text: ArrayExpress

characteristic: broker name

text: narrow-leaved blue lupine

text: seedling development stage

text: Lanr1 allele

characteristic: genotype

text: Lupinus angustifolius

characteristic: organism

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 56


E-MTAB-11164:Sample 57

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11164:Sample 57

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Lanr1 allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

characteristic: organism part

text: anthracnose resistant

characteristic: phenotype

characteristic: replicate

text: Lupinus angustifolius

text: Sample 57

characteristic: title


E-MTAB-11164:Sample 58

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11164:Sample 58

text: ArrayExpress

text: narrow-leaved blue lupine

characteristic: common name

characteristic: description

text: seedling development stage

characteristic: developmental stage

characteristic: ecotype

text: Lanr1 allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 58


E-MTAB-11164:Sample 59

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11164:Sample 59

characteristic: Submitter Id

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Lanr1 allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 59


E-MTAB-11164:Sample 6

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11164:Sample 6

characteristic: age

text: ArrayExpress

characteristic: broker name

text: narrow-leaved blue lupine

text: seedling development stage

text: wild type genotype

characteristic: genotype

text: Lupinus angustifolius

characteristic: organism

text: Lupinus angustifolius

text: leaf

text: anthracnose susceptible

text: Lupinus angustifolius

text: Sample 6


E-MTAB-11164:Sample 60

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11164:Sample 60

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Lanr1 allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

characteristic: organism part

text: anthracnose resistant

characteristic: phenotype

characteristic: replicate

text: Lupinus angustifolius

text: Sample 60

characteristic: title


E-MTAB-11164:Sample 61

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11164:Sample 61

text: ArrayExpress

text: narrow-leaved blue lupine

characteristic: common name

characteristic: description

text: seedling development stage

characteristic: developmental stage

characteristic: ecotype

text: Lanr1 allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 61


E-MTAB-11164:Sample 62

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11164:Sample 62

characteristic: Submitter Id

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Lanr1 allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 62


E-MTAB-11164:Sample 63

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11164:Sample 63

characteristic: age

text: ArrayExpress

characteristic: broker name

text: narrow-leaved blue lupine

text: seedling development stage

text: Lanr1 allele

characteristic: genotype

text: Lupinus angustifolius

characteristic: organism

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 63


E-MTAB-11164:Sample 64

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11164:Sample 64

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Lanr1 allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

characteristic: organism part

text: anthracnose resistant

characteristic: phenotype

characteristic: replicate

text: Lupinus angustifolius

text: Sample 64

characteristic: title


E-MTAB-11164:Sample 65

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11164:Sample 65

text: ArrayExpress

text: narrow-leaved blue lupine

characteristic: common name

characteristic: description

text: seedling development stage

characteristic: developmental stage

characteristic: ecotype

text: Lanr1 allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 65


E-MTAB-11164:Sample 66

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11164:Sample 66

characteristic: Submitter Id

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Lanr1 allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 66


E-MTAB-11164:Sample 67

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11164:Sample 67

characteristic: age

text: ArrayExpress

characteristic: broker name

text: narrow-leaved blue lupine

text: seedling development stage

text: Lanr1 allele

characteristic: genotype

text: Lupinus angustifolius

characteristic: organism

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 67


E-MTAB-11164:Sample 68

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11164:Sample 68

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Lanr1 allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

characteristic: organism part

text: anthracnose resistant

characteristic: phenotype

characteristic: replicate

text: Lupinus angustifolius

text: Sample 68

characteristic: title


E-MTAB-11164:Sample 69

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11164:Sample 69

text: ArrayExpress

text: narrow-leaved blue lupine

characteristic: common name

characteristic: description

text: seedling development stage

characteristic: developmental stage

characteristic: ecotype

text: Lanr1 allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 69


E-MTAB-11164:Sample 7

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11164:Sample 7

characteristic: Submitter Id

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: wild type genotype

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose susceptible

text: Lupinus angustifolius

text: Sample 7


E-MTAB-11164:Sample 70

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11164:Sample 70

characteristic: age

text: ArrayExpress

characteristic: broker name

text: narrow-leaved blue lupine

text: seedling development stage

text: Lanr1 allele

characteristic: genotype

text: Lupinus angustifolius

characteristic: organism

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 70


E-MTAB-11164:Sample 71

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11164:Sample 71

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Lanr1 allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

characteristic: organism part

text: anthracnose resistant

characteristic: phenotype

characteristic: replicate

text: Lupinus angustifolius

text: Sample 71

characteristic: title


E-MTAB-11164:Sample 72

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11164:Sample 72

text: ArrayExpress

text: narrow-leaved blue lupine

characteristic: common name

characteristic: description

text: seedling development stage

characteristic: developmental stage

characteristic: ecotype

text: Lanr1 allele

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose resistant

text: Lupinus angustifolius

text: Sample 72


E-MTAB-11164:Sample 73

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11164:Sample 73

characteristic: Submitter Id

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Boregine

text: putative donor of anthracnose resistance

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: putatively anthracnose resistant

text: Lupinus angustifolius

text: Sample 73


E-MTAB-11164:Sample 74

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11164:Sample 74

characteristic: age

text: ArrayExpress

characteristic: broker name

text: narrow-leaved blue lupine

text: seedling development stage

text: Boregine

characteristic: genotype

text: Lupinus angustifolius

characteristic: organism

text: Lupinus angustifolius

text: leaf

text: putatively anthracnose resistant

text: Lupinus angustifolius

text: Sample 74


E-MTAB-11164:Sample 75

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11164:Sample 75

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Boregine

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

characteristic: organism part

text: putatively anthracnose resistant

characteristic: phenotype

characteristic: replicate

text: Lupinus angustifolius

text: Sample 75

characteristic: title


E-MTAB-11164:Sample 76

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11164:Sample 76

text: ArrayExpress

text: narrow-leaved blue lupine

characteristic: common name

characteristic: description

text: seedling development stage

characteristic: developmental stage

text: Boregine

characteristic: ecotype

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: putatively anthracnose resistant

text: Lupinus angustifolius

text: Sample 76


E-MTAB-11164:Sample 77

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11164:Sample 77

characteristic: Submitter Id

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Boregine

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: putatively anthracnose resistant

text: Lupinus angustifolius

text: Sample 77


E-MTAB-11164:Sample 78

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11164:Sample 78

characteristic: age

text: ArrayExpress

characteristic: broker name

text: narrow-leaved blue lupine

text: seedling development stage

text: Boregine

characteristic: genotype

text: Lupinus angustifolius

characteristic: organism

text: Lupinus angustifolius

text: leaf

text: putatively anthracnose resistant

text: Lupinus angustifolius

text: Sample 78


E-MTAB-11164:Sample 79

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11164:Sample 79

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Boregine

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

characteristic: organism part

text: putatively anthracnose resistant

characteristic: phenotype

characteristic: replicate

text: Lupinus angustifolius

text: Sample 79

characteristic: title


E-MTAB-11164:Sample 8

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11164:Sample 8

text: ArrayExpress

text: narrow-leaved blue lupine

characteristic: common name

characteristic: description

text: seedling development stage

characteristic: developmental stage

characteristic: ecotype

text: wild type genotype

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: anthracnose susceptible

text: Lupinus angustifolius

text: Sample 8


E-MTAB-11164:Sample 80

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11164:Sample 80

characteristic: Submitter Id

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Boregine

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: putatively anthracnose resistant

text: Lupinus angustifolius

text: Sample 80


E-MTAB-11164:Sample 81

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11164:Sample 81

characteristic: age

text: ArrayExpress

characteristic: broker name

text: narrow-leaved blue lupine

text: seedling development stage

text: Boregine

characteristic: genotype

text: Lupinus angustifolius

characteristic: organism

text: Lupinus angustifolius

text: leaf

text: putatively anthracnose resistant

text: Lupinus angustifolius

text: Sample 81


E-MTAB-11164:Sample 82

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11164:Sample 82

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Boregine

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

characteristic: organism part

text: putatively anthracnose resistant

characteristic: phenotype

characteristic: replicate

text: Lupinus angustifolius

text: Sample 82

characteristic: title


E-MTAB-11164:Sample 83

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11164:Sample 83

text: ArrayExpress

text: narrow-leaved blue lupine

characteristic: common name

characteristic: description

text: seedling development stage

characteristic: developmental stage

text: Boregine

characteristic: ecotype

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: putatively anthracnose resistant

text: Lupinus angustifolius

text: Sample 83


E-MTAB-11164:Sample 84

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11164:Sample 84

characteristic: Submitter Id

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Boregine

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: putatively anthracnose resistant

text: Lupinus angustifolius

text: Sample 84


E-MTAB-11164:Sample 85

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11164:Sample 85

characteristic: age

text: ArrayExpress

characteristic: broker name

text: narrow-leaved blue lupine

text: seedling development stage

text: Boregine

characteristic: genotype

text: Lupinus angustifolius

characteristic: organism

text: Lupinus angustifolius

text: leaf

text: putatively anthracnose resistant

text: Lupinus angustifolius

text: Sample 85


E-MTAB-11164:Sample 86

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11164:Sample 86

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Boregine

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

characteristic: organism part

text: putatively anthracnose resistant

characteristic: phenotype

characteristic: replicate

text: Lupinus angustifolius

text: Sample 86

characteristic: title


E-MTAB-11164:Sample 87

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11164:Sample 87

text: ArrayExpress

text: narrow-leaved blue lupine

characteristic: common name

characteristic: description

text: seedling development stage

characteristic: developmental stage

text: Boregine

characteristic: ecotype

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: putatively anthracnose resistant

text: Lupinus angustifolius

text: Sample 87


E-MTAB-11164:Sample 88

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11164:Sample 88

characteristic: Submitter Id

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Boregine

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: putatively anthracnose resistant

text: Lupinus angustifolius

text: Sample 88


E-MTAB-11164:Sample 89

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11164:Sample 89

characteristic: age

text: ArrayExpress

characteristic: broker name

text: narrow-leaved blue lupine

text: seedling development stage

text: Boregine

characteristic: genotype

text: Lupinus angustifolius

characteristic: organism

text: Lupinus angustifolius

text: leaf

text: putatively anthracnose resistant

text: Lupinus angustifolius

text: Sample 89


E-MTAB-11164:Sample 9

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11164:Sample 9

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: wild type genotype

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

characteristic: organism part

text: anthracnose susceptible

characteristic: phenotype

characteristic: replicate

text: Lupinus angustifolius

text: Sample 9

characteristic: title


E-MTAB-11164:Sample 90

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11164:Sample 90

text: ArrayExpress

text: narrow-leaved blue lupine

characteristic: common name

characteristic: description

text: seedling development stage

characteristic: developmental stage

text: Boregine

characteristic: ecotype

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: putatively anthracnose resistant

text: Lupinus angustifolius

text: Sample 90


E-MTAB-11164:Sample 91

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11164:Sample 91

characteristic: Submitter Id

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Boregine

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: putatively anthracnose resistant

text: Lupinus angustifolius

text: Sample 91


E-MTAB-11164:Sample 92

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-11164:Sample 92

characteristic: age

text: ArrayExpress

characteristic: broker name

text: narrow-leaved blue lupine

text: seedling development stage

text: Boregine

characteristic: genotype

text: Lupinus angustifolius

characteristic: organism

text: Lupinus angustifolius

text: leaf

text: putatively anthracnose resistant

text: Lupinus angustifolius

text: Sample 92


E-MTAB-11164:Sample 93

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11164:Sample 93

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Boregine

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

characteristic: organism part

text: putatively anthracnose resistant

characteristic: phenotype

characteristic: replicate

text: Lupinus angustifolius

text: Sample 93

characteristic: title


E-MTAB-11164:Sample 94

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11164:Sample 94

text: ArrayExpress

text: narrow-leaved blue lupine

characteristic: common name

characteristic: description

text: seedling development stage

characteristic: developmental stage

text: Boregine

characteristic: ecotype

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: putatively anthracnose resistant

text: Lupinus angustifolius

text: Sample 94


E-MTAB-11164:Sample 95

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11164:Sample 95

characteristic: Submitter Id

text: ArrayExpress

text: narrow-leaved blue lupine

text: seedling development stage

text: Boregine

text: Lupinus angustifolius

text: Lupinus angustifolius

text: leaf

text: putatively anthracnose resistant

text: Lupinus angustifolius

text: Sample 95


E-MTAB-11164:Sample 96

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-11164:Sample 96

characteristic: age

text: ArrayExpress

characteristic: broker name

text: narrow-leaved blue lupine

text: seedling development stage

text: Boregine

characteristic: genotype

text: Lupinus angustifolius

characteristic: organism

text: Lupinus angustifolius

text: leaf

text: putatively anthracnose resistant

text: Lupinus angustifolius

text: Sample 96


characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:Department of Biomedical Sciences, Faculty of Health and Medical Sciences, University of Copenhagen  Novo Nordisk Foundation Center for Basic Metabolic Research, Faculty of Health and Medical Sciences, University of Copenhagen

unit: week

text: ArrayExpress

text: house mouse

text: Protocols: Mice were subject to a short-term fast of 4 hours before anesthesia with 2.5% isoflurane. A liver biopsy was taken from the right medial lobe and stored in RNAlater a -20 degree C until analysis. Raw sequencing data were processed using CASAVA v. 1.8 conversion software (Illumina). Total RNA was purified by an AllPrep DNA/RNA/ protein extraction kit (QIAgen) according to manufacturer’s instructions and qualified using a 2100 Bioanalyzer instrument (Agilent Genomics). RNA-sequencing was done using TruSeq Stranded Total RNA Library Prep Kit (Illumina) according to the manufacturer’s protocol: Ribosomal RNA was depleted using TruSeq Standed RNA Ribominus Gold (Illumina), and cDNA libraries were purified using AMPure XP Beads (Beckman). Following end-repair and poly(A)-tailing, adaptor ligation was performed with Truseq RNA single indexes set A/B (Illumina).

text: adult

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: liver

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

text: Department of Biomedical Sciences, Faculty of Health and Medical Sciences, University of Copenhagen Novo Nordisk Foundation Center for Basic Metabolic Research, Faculty of Health and Medical Sciences, University of Copenhagen

text: public

text: ArrayExpress

text: house mouse

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: liver

text: Mus musculus

text: male


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: house mouse

text: adult

text: Gcgr knockout

text: Mus musculus

text: Mus musculus

text: liver

text: Mus musculus

text: male


E-MTAB-12064:Sample 3

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-12064:Sample 3

tag: Namespace:Internal Medicine C, University Medicine Greifswald

characteristic: Submitter Id

text: less than or equal to 30

unit: year

characteristic: age

text: ArrayExpress

text: alpha-beta CD8+ T cells

text: human

text: Protocols: Cells were counted via flow cytometry and harvested using wide bore tips to reduce pipetting-induced stress. Cell numbers were adjusted to 10000 cells per sample. According to the manufacturer's instructions: Chromium Single Cell 3' Reagent Kits User Guide (v3.1 Chemistry) https://www.10xgenomics.com/support/single-cell-gene-expression/documentation/steps/library-prep/chromium-single-cell-3-reagent-kits-user-guide-v-3-1-chemistry According to the manufacturer's instructions: Chromium Single Cell 3' Reagent Kits User Guide (v3.1 Chemistry) https://www.10xgenomics.com/support/single-cell-gene-expression/documentation/steps/library-prep/chromium-single-cell-3-reagent-kits-user-guide-v-3-1-chemistry

text: adult

text: normal

characteristic: disease

text: CRISPR/Cas9 mediated BCL11B knockout

text: mixed pool of donors

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: mixed

text: Sample 3


E-MTAB-12064:Sample 2

text: Internal Medicine C, University Medicine Greifswald

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-12064:Sample 2

text: less than or equal to 30

text: ArrayExpress

characteristic: broker name

text: alpha-beta CD8+ T cells

text: human

text: adult

text: normal

text: scrambled gRNA

characteristic: genotype

text: mixed pool of donors

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: mixed

text: Sample 2


E-MTAB-12064:Sample 1

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-12064:Sample 1

text: less than or equal to 30

text: ArrayExpress

text: alpha-beta CD8+ T cells

text: human

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: normal

text: wild type genotype

text: mixed pool of donors

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: mixed

characteristic: sex

text: Sample 1

characteristic: title


E-MTAB-12073:Sample 1

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12073:Sample 1

tag: Namespace:Department of Biosciences - Universita degli Studi di Milano

text: ArrayExpress

text: Protocols: Total RNA for RNA-seq was extracted from PA14 wt and PA14ΔgssA grown in BHI medium at 37 °C with shaking until OD600 of 2. For each strain, three independent biological replicates were performed. Total RNA was prepared from pelleted bacterial cells resuspended in RNAprotect Cell Reagent (Qiagen), incubated for 5 min at room temperature, pelleted by centrifugation, and stored at −80°C until use. Total RNA extraction was performed by the RNeasy Mini Kits (Qiagen) according to the manufacturer’s instructions, including RNase-free DNaseI in-column treatment. The concentration and quality of the extracted RNAs were assessed by a Biospectrometer (Eppendorf). RNA integrity was checked by electrophoresis of samples on denaturing (7 M urea) 6% polyacrylamide gel (dPAGE). The concentration and the purity of the RNA starting material were determined spectrophotometrically while RNA Integrity Number (RIN) was measured on an Agilent TapeStation 4200. An additional DNase step was included to cleave DNA that could interfere with rRNA removal and negatively affect library preparation and sequencing. RNA libraries were generated starting from 3 μg of total RNA. rRNA was depleted with Illumina Ribo-Zero rRNA Removal Kit (Gram-Negative Bacteria) and libraries were generated according to Illumina TruSeq® Stranded mRNA Library Prep protocol. RNA libraries were accurately quantified with a fluorometric method: QUBIT dsDNA HS assay kit and the size and purity were verified on an Agilent TapeStation 4200.

text: deletion

characteristic: genetic modification

text: gssA deletion

text: Pseudomonas aeruginosa UCBPP-PA14

text: Pseudomonas aeruginosa UCBPP-PA14

text: Pseudomonas aeruginosa UCBPP-PA14

characteristic: strain

text: Sample 1


E-MTAB-12073:Sample 2

text: Department of Biosciences - Universita degli Studi di Milano

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-12073:Sample 2

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: deletion

text: gssA deletion

characteristic: genotype

text: Pseudomonas aeruginosa UCBPP-PA14

text: Pseudomonas aeruginosa UCBPP-PA14

text: Pseudomonas aeruginosa UCBPP-PA14

text: Sample 2


E-MTAB-12073:Sample 3

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-12073:Sample 3

text: ArrayExpress

characteristic: description

text: deletion

text: gssA deletion

text: Pseudomonas aeruginosa UCBPP-PA14

characteristic: organism

text: Pseudomonas aeruginosa UCBPP-PA14

text: Pseudomonas aeruginosa UCBPP-PA14

text: Sample 3


E-MTAB-12073:Sample 4

text: public

text: E-MTAB-12073:Sample 4

text: ArrayExpress

text: wild type genotype

text: Pseudomonas aeruginosa UCBPP-PA14

text: Pseudomonas aeruginosa UCBPP-PA14

text: Pseudomonas aeruginosa UCBPP-PA14

text: Sample 4

characteristic: title


E-MTAB-12073:Sample 5

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-12073:Sample 5

text: ArrayExpress

text: wild type genotype

text: Pseudomonas aeruginosa UCBPP-PA14

text: Pseudomonas aeruginosa UCBPP-PA14

text: Pseudomonas aeruginosa UCBPP-PA14

text: Sample 5


E-MTAB-12073:Sample 6

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-12073:Sample 6

text: ArrayExpress

text: wild type genotype

text: Pseudomonas aeruginosa UCBPP-PA14

text: Pseudomonas aeruginosa UCBPP-PA14

text: Pseudomonas aeruginosa UCBPP-PA14

text: Sample 6


characteristic: External Id

text: public

tag: Namespace:Department of Clinical Medicine, Aarhus University

text: 8 to 10

characteristic: age

text: ArrayExpress

text: vascular smooth muscle cell

text: house mouse

characteristic: common name

text: Protocols: C57BL/6 mice (8-10 weeks old) were euthanized and the heart was perfused through the apex with sterile HBSS. Aortas (pool of 5) were dissected out and the perivascular tissue removed followed by washing twice in ice cold HBSS. To facilitate the removal of the adventitial layer, aortas were placed in an enzyme solution for 10 min at 37°C (2 mg/ml collagenase II, 1 mg/ml soybean trypsin inhibitor, 0.75 U/ml elastase, 1% penicillin/streptomycin in HBSS) followed by washing in DMEM/F12 medium. Adventitia was stripped off and the aortas were opened longitudinally and washed in DMEM/F12 medium to removed blood clots. The endothelial cell layer was then removed by gently scraping with fine forceps followed by washing in DMEM/F12 medium and mincing of the remaining medial layer into small pieces with scissors, which were incubated for a second digestion with the enzyme solution for 1 h at 37°C. Digested aortas were rigorously pipetted up and down several times and the cell suspension was filtered through a 70-μm cell strainer before undergoing 3 cycles of centrifugation (1000 rpm, 5 min, room temperature) and washing in DMEM/F12 medium to remove the enzyme solution. The cell pellet was finally resuspended in DMEM/F12 medium containing 20% fetal bovine serum (FBS) and 1% penicillin/streptomycin, and SMCs were seeded into collagen type-I-coated 24-well culture plates. Two days later, cell medium was changed to DMEM/F12 medium containing 10% FBS and 1% penicillin/streptomycin. Aortic SMCs at a confluency of ~80% (P4) were serum starved for 24 h and culture wells were allocated into 4 groups (4 wells per group). Group 1 was left untreated for 72 hours (control). Group 2 was treated with human TNF protein (final concentration 10 ng/µL in PBS containing 0.1% BSA, R&D systems, 210-TA-020) for the final 24 hours. Group 3 was treated with water-soluble cholesterol (final concentration 10 μg/mL, Sigma-Aldrich, C4951) for 72 hours. In Group 4, cholesterol and TNF treatment as described above was combined. RNA was isolated from wells using the NucleoSpin RNA Plus Kit (Macherey-Nagel, 790984) RNA sequencing was performed by the BGI sequencing service. All RNA samples passed quality control (Agilent 4200 electrophoresis system). For the library preparation non-stranded and polyA-selected mRNA were used. Non-stranded DNA libraries were produced.

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: aorta

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex


text: Department of Clinical Medicine, Aarhus University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 8 to 10

text: ArrayExpress

text: vascular smooth muscle cell

text: house mouse

text: adult

text: normal

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: aorta

text: Mus musculus

text: male

characteristic: strain


characteristic: ENA-CHECKLIST

text: public

tag: Namespace:Wallenberg Center for Molecular Medicine (WCMM) Department of Biomedical and Clinical Sciences (BKV) Division of Molecular Medicine and Virology (MMV) Faculty of Medicine and Health Sciences, Linkoping University, Linkoping, Sweden

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: hESC

text: embryonic stem cell

text: human

text: Protocols: Cells collected from cell cultures, see growth protocol. hESCs were cultured in Essential 8TM medium (A1517001, ThermoFisher Scientific) in plates and flasks coated with 10 mg/ml Vitronectin (A14700, ThermoFisher Scientific). Cells were passaged by incubation in 0.5 mM EDTA-PBS (stock: 0.5 M EDTA, AM9260G, Thermo Fisher Scientific). Cells were treated with 10 mM CHIR99021 for 24 hours (n = 3 samples). Total RNA was extracted with the RNeasy Mini Kit (Cat. #74106, Qiagen). 500 ng of total RNA were processed with the Illumina Stranded mRNA Prep kit (Cat. #20040898, #20040896, #20040899, #20026121, Illumina) for library preparation. Messenger RNA (mRNA) was purified from total RNA using poly-T oligo-attached magnetic beads. After fragmentation, the first strand cDNA was synthesized using random hexamer primers followed by the second strand cDNA synthesis. cDNA was then subjected to end repair, A-tailing, adapter ligation, size selection, amplification, and purification.

characteristic: description

text: embryo stage

text: normal

text: wild type genotype

characteristic: genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: inner cell mass

text: Homo sapiens


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Wallenberg Center for Molecular Medicine (WCMM) Department of Biomedical and Clinical Sciences (BKV) Division of Molecular Medicine and Virology (MMV) Faculty of Medicine and Health Sciences, Linkoping University, Linkoping, Sweden

text: public

text: ArrayExpress

text: hESC

text: embryonic stem cell

text: human

characteristic: common name

text: embryo stage

text: normal

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: inner cell mass

text: Homo sapiens

characteristic: title


characteristic: INSDC center name

text: public

text: ArrayExpress

text: embryonic kidney cell

text: human

text: Protocols: Cells were filtered through a 40 µm cell strainer (KKE3.1, Carl Roth) and processed for CUT&RUN (Zambanini et al., 2022). 500,000 cells/sample were harvested using either Trypsin EDTA 0.25% (HEK293Ts) or EDTA 0.5 mM in PBS (hESCs) and washed twice in DPBS (Cat. #14190094, Thermo Fisher Scientific). HEK293T cells (HEK293Ts) were cultured in medium consisting of DMEM, high glucose (41966-029, Gibco - Thermo Fisher Scientific) supplemented with 10% Calf Bovine Serum (12133C, Sigma-Aldrich) and 10 U/ml Penicillin-Streptomycin (15276355, Gibco - Thermo Fisher Scientific). HEK293Ts were passaged by incubation in Trypsin EDTA 0.25% (25-200-056, Thermo Fisher Scientific). hESCs were cultured in Essential 8TM medium (A1517001, ThermoFisher Scientific) in plates and flasks coated with 10 g/ml Vitronectin (A14700, ThermoFisher Scientific). Cells were passaged by incubation in 0.5 mM EDTA-PBS (stock: 0.5 M EDTA, AM9260G, Thermo Fisher Scientific). HEK293Ts were grown in culture medium supplemented with 10 nM LGK (S7143, Selleck Chemicals) for the 48 hours preceding the seeding. HEK293Ts were then seeded at a density of 104 cells/cm2 in culture medium (see “Cell Culture” section) supplemented with 10 nM LGK. After 24 hours, cells were cultured in medium supplemented with 10 M CHIR99021 (SML1046, Sigma Aldrich). Medium and treatment were renewed every 24 hours. hESCs were seeded at a density of 104 cells/cm2 in Essential 8TM medium, and after 24 hours, they were cultured in Essential 8TM medium supplemented with 10 M CHIR99021. Cells were then detached (as described in the “Sample collection protocol”) after 90 minutes, 4 hours, 24 hours, and 72 hours of CHIR treatment. All experiments were performed in triplicate (n = 3 for each cell type at each time-point). Cells were washed three times in Nuclear Extraction (NE) buffer (HEPES-KOH pH-8.2 [20 mM], KCl [10 mM], Spermi- dine [0.5 mM], IGEPAL [0.05%], Glycerol [20%], Roche Complete Protease Inhibitor EDTA-Free), then resuspended in 40 μl NE per sample and bound to 20 μl Magnetic ConA Agarose beads equilibrated in binding buffer. After incubation, nuclei and beads were resuspended for 5 minutes in EDTA wash buffer (wash buffer with EDTA [0.2 mM]). Samples were divided in 200 μl PCR tubes and antibody incubation was performed in 200 μl wash buffer with 2 μl of anti-β-catenin antibody (Cat. #ABIN2855042, antibodies-online) overnight (ON) at 4 °C on a rotator. After ON incubation, samples were washed five times in wash buffer and resuspended in 200 μl of pAG-MN buffer (wash buffer supplemented with pAG-MN 0.6 μg/ml) for 30 minutes at 4 °C on a rotator. Samples were washed five times, followed by digestion for 30 minutes in wet ice in wash buffer with 2 mM CaCl2. After 30 minutes, the digestion buffer was removed and the reaction was stopped with 50 μl of 1X Urea STOP buffer (NaCl [100 mM], EDTA [2 mM], EGTA [2 mM], IGEPAL [0.5%], Urea [8.8 M]) and the samples were incubated for 1 hour at 4°C. Beads were collected on the magnetic rack, while the liquid was transferred to a new PCR tube, where it was cleaned up twice using Mag-Bind TotalPure NGS beads (Cat. #M1327, Omega Bio- Tek) at 2X, and then resuspended in 20 μl Tris-HCl pH 7.5. Library preparation was performed using the KAPA Hyper Prep Kit for Illumina platforms (Cat. #KK8504, KAPA Biosystems) according to the manufacturer’s guidelines with the following modifications. End repair and A-tailing was performed with 0.4 size reactions with 20 µl of purified DNA. The thermocycler conditions were set to 12 °C for 15 min, 37 °C for 15 min and 58 °C for 25 min to prevent thermal degradation of the shortest fragments. Adapter ligation was done with 0.4 size reactions. KAPA Dual Indexed adapters were used at 0.15 µM. A post-ligation clean-up was performed with Mag-Bind TotalPure NGS beads at 1.2X. Resuspension was done in 10 mM Tris-HCl pH 8.0. Library amplification was performed with 0.5 size reactions. The cycling conditions were set as follows: 45 sec initial denaturation at 98 °C, 15 sec denaturation at 98 °C, 10 sec annealing/elongation at 60 °C, 1 min final extension at 72 °C, hold at 4 °C, with 13 cycles. After amplification, a post-amplification cleanup was performed with 1.2X beads. Libraries were then run on an E-Gel EX 2% agarose gel (Cat. # G402022, Invitrogen) for 10 min using the E-Gel Power Snap Electrophoresis System (Invitrogen). Bands of interest between 150 and 500 bp were cut out and purified using the GeneJET Gel Extraction Kit (Cat. #K0691, Thermo Scientific) according to manufacturer’s instructions.

text: embryo stage

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: kidney

characteristic: organism part

characteristic: replicate

text: Homo sapiens


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: hESC

text: embryonic stem cell

text: human

text: embryo stage

text: normal

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: inner cell mass

text: Homo sapiens


characteristic: ENA-CHECKLIST

text: public

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: embryonic kidney cell

text: human

text: Protocols: Cells collected from cell cultures, see growth protocol. HEK293T cells (HEK293Ts) were cultured in medium consisting of DMEM, high glucose (41966-029, Gibco - Thermo Fisher Scientific) supplemented with 10% Calf Bovine Serum (12133C, Sigma-Aldrich) and 10 U/ml Penicillin-Streptomycin (15276355, Gibco - Thermo Fisher Scientific). HEK293Ts were passaged by incubation in Trypsin EDTA 0.25% (25-200-056, Thermo Fisher Scientific). hESCs were cultured in Essential 8TM medium (A1517001, ThermoFisher Scientific) in plates and flasks coated with 10 mg/ml Vitronectin (A14700, ThermoFisher Scientific). Cells were passaged by incubation in 0.5 mM EDTA-PBS (stock: 0.5 M EDTA, AM9260G, Thermo Fisher Scientific). Both cell types were treated with 10 mM CHIR99021 for 4 hours, 24 hours and 3 days (n = 3 samples for each condition). Cells were collected, lysed in ice cold lysis buffer (10 mM Tris-HCl pH 7.4, 10 mM NaCl, 3 mM MgCl2, 0.1% IGEPAL CA-630), and pelleted. Pelleted nuclei were incubated in 50 ml transposition reaction mix (20034210, Illumina) at 370C for 30 minutes. Transposed DNA fragments were amplified for 13 cycles in the presence of Custom Nextera PCR primers (Buenrostro et al., 2013) using the NEBNext High-Fidelity 2x PCR Master Mix (Cat. #M0541, New England Biolabs). Libraries were purified using the High Pure PCR Production Purification Kit (11732676001, Roche / Sigma-Aldrich). Libraries were validated on an Agilent 2100 and quantified using quantitative PCR (Q-PCR).

characteristic: description

text: embryo stage

text: normal

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: kidney

text: Homo sapiens


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: ArrayExpress

text: hESC

text: embryonic stem cell

text: human

text: embryo stage

text: normal

text: wild type genotype

characteristic: genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: inner cell mass

text: Homo sapiens


characteristic: External Id

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-11-08-2022-09:51:39:423-89061

tag: Namespace:Biology Centre, Czech Academy of Sciences

text: nuclear DNA isolated from shoots of Cuscuta europea using CTAB method

text: Cuscuta europaea

text: Cuscuta europaea

text: Cuscuta europea whole shoots

characteristic: title


text: Biology Centre, Czech Academy of Sciences

text: public

text: ena-SAMPLE-TAB-11-08-2022-09:51:39:423-89062

text: nuclear DNA isolated from shoots of Cuscuta epithymum using CTAB method

text: Cuscuta epithymum

text: Cuscuta epithymum

text: Cuscuta epithymum whole shoots


text: public

tag: Namespace:Nantes Universite, CHU Nantes, CNRS, INSERM, l’institut du thorax, F-44000 Nantes, France

text: ArrayExpress

text: cardiocyte

text: human

characteristic: common name

text: Protocols: After 30 days of hiPSC cardiac differentiation, for each sample, cells were harvested from three distinct beating wells, dissociated using the Multi Tissue Dissociation Kit 3 (Miltenyi Biotec), and pooled. Cell suspensions were filtered on a 40 µm Flowmi® Cell Strainer, counted and cell viability was assessed. For each sample, single-cell droplet libraries were generated from 16000 cells with the Chromium Single Cell 3ʹ GEM, Library & Gel Bead Kit v3 (10X Genomics). For each sample, single-cell droplet libraries were generated from 16000 cells with the Chromium Single Cell 3ʹ GEM, Library & Gel Bead Kit v3 (10X Genomics).

text: infant

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

text: cardiac differentiation condition

characteristic: growth condition

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: skin of prepuce of penis

characteristic: organism part

text: induced pluripotent stem cell

characteristic: progenitor cell type

characteristic: sampling time point

text: Homo sapiens

text: male

characteristic: sex


characteristic: ENA-CHECKLIST

text: Nantes Universite, CHU Nantes, CNRS, INSERM, l’institut du thorax, F-44000 Nantes, France

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: cardiocyte

text: human

characteristic: description

text: infant

text: normal

text: wild type genotype

text: cardiac differentiation condition

text: Homo sapiens

text: Homo sapiens

text: skin of prepuce of penis

text: induced pluripotent stem cell

text: Homo sapiens

text: male


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-11-08-2022-16:04:23:055-1123

text: Cuscuta europaea

characteristic: organism

text: Cuscuta europaea

text: Cuscuta europea whole shoots

characteristic: title


text: Streptococcus pneumoniae

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: Streptococcus pneumoniae

characteristic: common name

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae


text: public

text: ArrayExpress

text: induced pluripotent stem cell

text: human

text: Protocols: Directed cardiac differentiations of hiPSCs were performed using the established matrix sandwich method (Es-Salah-Lamoureux et al., 2016). Briefly, when hiPSCs reached 90% confluency, an overlay of Growth Factor Reduced Matrigel (0.033 mg/ml, BD Corning) was added. Differentiation was initiated 24h later by culturing the cells in RPMI1640 medium (Life Technologies) supplemented with B27 (without insulin, Life Technologies), 2 mM L-glutamine (Life Technologies), 1% NEAA (Life Technologies), 100 ng/mL Activin A (Miltenyi Biotec), 1X Pen/Strep (Life Technologies) and 10 ng/mL FGF2 for 24 hours. On the next day, the medium was replaced by RPMI1640 medium supplemented with B27 without insulin, 2 mM L-glutamine, 1% NEAA, 10 ng/mL BMP4 (Miltenyi Biotec), 1X Pen/Strep and 5 ng/mL FGF2 for 4 days. By day 5, cells were cultured in RPMI1640 medium supplemented with B27 complete (Life Technologies), 2 mM L-glutamine, 1X Pen/Strep and 1% NEAA and changed every two days until day 30. For each hiPSC line, samples were harvested daily from D-1 to D30 of the cardiac differentiation protocol from three independent cardiac differentiations. Total RNA were extracted using the NucleoSpin RNA kit (MACHEREY-NAGEL) and their quality assessed by NanoDropTM 1000 Spectrophotometer (Thermo Fisher Scientific). 3’RNA libraries were prepared by GenoBiRD core facility according to their published method (Charpentier et al., 2021)

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: skin

characteristic: organism part

text: fibroblast

characteristic: progenitor cell type

text: Homo sapiens

text: male

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: induced pluripotent stem cell

text: human

text: adult

text: normal

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: skin

text: fibroblast

text: Homo sapiens

text: male


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-11822:04_65_DC2650_WT8288-C04_D-1

text: ArrayExpress

characteristic: broker name

text: induced pluripotent stem cell

text: human

characteristic: description

text: adult

text: normal

text: wild type genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: mononuclear cell

text: Homo sapiens

text: male


text: public

text: E-MTAB-11822:05_33_DC2673_WT8288-C04_D-1

text: ArrayExpress

text: induced pluripotent stem cell

text: human

characteristic: common name

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: mononuclear cell

text: Homo sapiens

text: male

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: induced pluripotent stem cell

text: human

text: adult

text: normal

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: blood

text: mononuclear cell

characteristic: progenitor cell type

text: Homo sapiens

text: male

characteristic: sex


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-11822:04_76_DC2650_WT8288-C04_D10

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: induced pluripotent stem cell

text: human

text: adult

text: normal

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: blood

text: mononuclear cell

text: Homo sapiens

text: male


characteristic: INSDC center name

text: public

text: E-MTAB-11822:05_44_DC2673_WT8288-C04_D10

text: ArrayExpress

characteristic: broker name

text: induced pluripotent stem cell

text: human

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: normal

text: wild type genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: mononuclear cell

text: Homo sapiens

text: male


characteristic: ENA-CHECKLIST

characteristic: INSDC first public

text: public

text: E-MTAB-11822:04_77_DC2650_WT8288-C04_D11

text: ArrayExpress

text: induced pluripotent stem cell

text: human

text: adult

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: mononuclear cell

text: Homo sapiens

text: male

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11822:05_45_DC2673_WT8288-C04_D11

text: ArrayExpress

text: induced pluripotent stem cell

text: human

text: adult

text: normal

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: blood

text: mononuclear cell

characteristic: progenitor cell type

text: Homo sapiens

text: male

characteristic: sex


characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: E-MTAB-11822:04_78_DC2650_WT8288-C04_D12

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: induced pluripotent stem cell

text: human

text: adult

text: normal

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: blood

text: mononuclear cell

text: Homo sapiens

text: male


characteristic: ENA-CHECKLIST

characteristic: INSDC first public

text: public

text: E-MTAB-11822:05_46_DC2673_WT8288-C04_D12

text: ArrayExpress

text: induced pluripotent stem cell

text: human

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: normal

text: wild type genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: mononuclear cell

text: Homo sapiens

text: male


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-11822:04_79_DC2650_WT8288-C04_D13

text: ArrayExpress

text: induced pluripotent stem cell

text: human

text: adult

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: mononuclear cell

text: Homo sapiens

text: male

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11822:05_47_DC2673_WT8288-C04_D13

text: ArrayExpress

text: induced pluripotent stem cell

text: human

text: adult

text: normal

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: blood

text: mononuclear cell

characteristic: progenitor cell type

text: Homo sapiens

text: male

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-11822:04_80_DC2650_WT8288-C04_D14

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: induced pluripotent stem cell

text: human

text: adult

text: normal

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: blood

text: mononuclear cell

text: Homo sapiens

text: male


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-11822:05_48_DC2673_WT8288-C04_D14

text: ArrayExpress

text: induced pluripotent stem cell

text: human

characteristic: common name

characteristic: description

text: adult

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