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characteristic: External Id

text: CENTRE FOR GEOGENETICS

text: public

text: 119_B3_116_L0_KapK-12-1-25_Ext-2_Lib-2_C

characteristic: Submitter Id

text: Kap Koebenhagen formation

text: Sandy organic material

text: Sandy sediments

text: Greenland

characteristic: geographic location (longitude)

text: Arctic dessert

characteristic: local environmental context

text: sediment metagenome

text: sediment metagenome

text: Capture enrichment


text: CENTRE FOR GEOGENETICS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 119_B3_116_L0_KapK-12-1-27_Ext-4_Lib-4_C

text: Kap Koebenhagen formation

text: Sandy organic material

text: Sandy sediments

text: Greenland

text: Arctic dessert

text: sediment metagenome

characteristic: project name

text: sediment metagenome

text: Capture enrichment

characteristic: sequencing method


text: CENTRE FOR GEOGENETICS

text: public

text: 119_B3_116_L0_KapK-12-1-29_Ext-6_Lib-6_C

text: Kap Koebenhagen formation

characteristic: broad-scale environmental context

characteristic: depth

text: Sandy organic material

characteristic: description

characteristic: elevation

text: Sandy sediments

characteristic: environmental medium

text: Greenland

characteristic: geographic location (country and/or sea)

text: Arctic dessert

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: Capture enrichment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CENTRE FOR GEOGENETICS

text: public

text: 74a_B1_83_L1_Lok-75-Sample-1_Ext-58_Lib-58_C

characteristic: Submitter Id

text: Kap Koebenhagen formation

text: Sandy organic material

text: Sandy sediments

text: Greenland

characteristic: geographic location (latitude)

text: Arctic dessert

text: sediment metagenome

text: sediment metagenome

text: Capture enrichment

characteristic: title


text: CENTRE FOR GEOGENETICS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 74a_B1_83_L3_Lok-75-Sample-3_Ext-59_Lib-59_C

text: Kap Koebenhagen formation

text: Sandy organic material

text: Sandy sediments

text: Greenland

characteristic: geographic location (longitude)

text: Arctic dessert

characteristic: local environmental context

text: sediment metagenome

text: sediment metagenome

text: Capture enrichment


text: CENTRE FOR GEOGENETICS

text: public

text: 69_B2_97_L0_KapK-12-1-33_Ext-10_Lib-10_C

text: Kap Koebenhagen formation

characteristic: broad-scale environmental context

characteristic: depth

text: Sandy organic material

characteristic: description

characteristic: elevation

text: Sandy sediments

characteristic: environmental medium

text: Greenland

text: Arctic dessert

text: sediment metagenome

characteristic: project name

text: sediment metagenome

text: Capture enrichment

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CENTRE FOR GEOGENETICS

text: public

text: 69_B2_100_L0_KapK-12-1-34_Ext-11_Lib-11_C

characteristic: Submitter Id

text: Kap Koebenhagen formation

text: Sandy organic material

text: Sandy sediments

text: Greenland

characteristic: geographic location (country and/or sea)

text: Arctic dessert

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: Capture enrichment


text: CENTRE FOR GEOGENETICS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 69_B2_100_L0_KapK-12-1-35_Ext-12_Lib-12_C

text: Kap Koebenhagen formation

text: Sandy organic material

text: Sandy sediments

text: Greenland

characteristic: geographic location (latitude)

text: Arctic dessert

text: sediment metagenome

text: sediment metagenome

text: Capture enrichment

characteristic: title


text: CENTRE FOR GEOGENETICS

text: public

text: 69_B2_100_L0_KapK-12-1-36_Ext-13_Lib-13_C

text: Kap Koebenhagen formation

characteristic: broad-scale environmental context

characteristic: depth

text: Sandy organic material

characteristic: description

characteristic: elevation

text: Sandy sediments

characteristic: environmental medium

text: Greenland

characteristic: geographic location (longitude)

text: Arctic dessert

characteristic: local environmental context

text: sediment metagenome

text: sediment metagenome

text: Capture enrichment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CENTRE FOR GEOGENETICS

text: public

text: 69_B2_103_L0_KapK-12-1-37_Ext-17_Lib-17_C

characteristic: Submitter Id

text: Kap Koebenhagen formation

text: Sandy organic material

text: Sandy sediments

text: Greenland

text: Arctic dessert

text: sediment metagenome

text: Shotgun and capture enriched metagenomic data from 2 million year old geological sediments

characteristic: project name

text: sediment metagenome

text: Capture enrichment

characteristic: sequencing method


text: CENTRE FOR GEOGENETICS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 69_B2_103_L0_KapK-12-1-38_Ext-18_Lib-18_C

text: Kap Koebenhagen formation

text: Sandy organic material

text: Sandy sediments

text: Greenland

characteristic: geographic location (country and/or sea)

text: Arctic dessert

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: Capture enrichment


text: CENTRE FOR GEOGENETICS

text: public

text: 69_B2_103_L0_KapK-12-1-39_Ext-19_Lib-19_C

text: Kap Koebenhagen formation

characteristic: broad-scale environmental context

characteristic: depth

text: Sandy organic material

characteristic: description

characteristic: elevation

text: Sandy sediments

characteristic: environmental medium

text: Greenland

characteristic: geographic location (latitude)

text: Arctic dessert

text: sediment metagenome

text: sediment metagenome

text: Capture enrichment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRAE

text: public

characteristic: Submitter Id

text: Reine Abi Khalil

text: Raw goat's milk at Day 0 of fermentation

text: Lebanon

text: Mount Lebanon, Chouf

characteristic: geographic location (region and locality)

text: Raw goat's milk

text: food metagenome

text: food metagenome

text: Raw goat's milk_RM-D0


text: INRAE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Reine Abi Khalil

text: Raw goat's milk added at Day 16 of fermentation

text: Lebanon

text: Mount Lebanon, Chouf

text: Raw goat's milk

text: food metagenome

text: food metagenome

text: Raw goat's milk_RM-D16


text: INRAE

text: public

characteristic: SRA accession

text: Reine Abi Khalil

text: Raw goat's milk added at Day 32 of fermentation

text: Lebanon

characteristic: geographic location (country and/or sea)

text: Mount Lebanon, Chouf

text: Raw goat's milk

text: food metagenome

characteristic: organism

text: food metagenome

text: Raw goat's milk_RM-D32


text: INRAE

text: public

text: Reine Abi Khalil

text: Raw goat's milk added at Day 53 of fermentation

characteristic: description

text: Lebanon

text: Mount Lebanon, Chouf

text: Raw goat's milk

text: food metagenome

text: food metagenome

text: Raw goat's milk_RM-D53


text: INRAE

text: public

text: Reine Abi Khalil

text: Labneh Ambaris sample collected during fermentation in a Used jar at Day 2 of fermentation

text: Lebanon

text: Mount Lebanon, Chouf

text: Labneh Ambaris during fermentation

text: food metagenome

text: food metagenome

text: Labneh Ambaris during fermentation, U-D2


text: INRAE

text: public

text: Reine Abi Khalil

text: Labneh Ambaris sample collected during fermentation in a Used jar at Day 4 of fermentation

text: Lebanon

text: Mount Lebanon, Chouf

text: Labneh Ambaris during fermentation

text: food metagenome

text: food metagenome

text: Labneh Ambaris during fermentation, U-D4


text: INRAE

text: public

text: Reine Abi Khalil

text: Labneh Ambaris sample collected during fermentation in a Used jar at Day 7 of fermentation

text: Lebanon

text: Mount Lebanon, Chouf

text: Labneh Ambaris during fermentation

text: food metagenome

text: food metagenome

text: Labneh Ambaris during fermentation, U-D7


text: INRAE

text: public

text: Reine Abi Khalil

text: Labneh Ambaris sample collected during fermentation in a Used jar at Day 10 of fermentation

text: Lebanon

text: Mount Lebanon, Chouf

text: Labneh Ambaris during fermentation

text: food metagenome

text: food metagenome

text: Labneh Ambaris during fermentation, U-D10


text: INRAE

text: public

text: Reine Abi Khalil

text: Labneh Ambaris sample collected during fermentation in a Used jar at Day 29 of fermentation

text: Lebanon

text: Mount Lebanon, Chouf

text: Labneh Ambaris during fermentation

text: food metagenome

text: food metagenome

text: Labneh Ambaris during fermentation, U-D29


text: INRAE

text: public

text: Reine Abi Khalil

text: Labneh Ambaris sample collected during fermentation in a Used jar at Day 47 of fermentation

text: Lebanon

text: Mount Lebanon, Chouf

text: Labneh Ambaris during fermentation

text: food metagenome

text: food metagenome

text: Labneh Ambaris during fermentation, U-D47


text: INRAE

text: public

text: Reine Abi Khalil

text: Labneh Ambaris sample collected during fermentation in a Used jar at Day 93 of fermentation

text: Lebanon

text: Mount Lebanon, Chouf

text: Labneh Ambaris during fermentation

text: food metagenome

text: food metagenome

text: Labneh Ambaris during fermentation, U-D93


text: INRAE

text: public

text: Reine Abi Khalil

text: Labneh Ambaris sample collected during fermentation in a Used jar at Day 98 of fermentation

text: Lebanon

text: Mount Lebanon, Chouf

text: Labneh Ambaris during fermentation

text: food metagenome

text: food metagenome

text: Labneh Ambaris during fermentation, U-D98


text: INRAE

text: public

text: Reine Abi Khalil

text: Labneh Ambaris sample collected during fermentation in a Used jar at Day 100 of fermentation

text: Lebanon

text: Mount Lebanon, Chouf

text: Labneh Ambaris during fermentation

text: food metagenome

text: food metagenome

text: Labneh Ambaris during fermentation, U-D100


text: INRAE

text: public

text: Reine Abi Khalil

text: Labneh Ambaris sample collected during fermentation in a Used jar at Day 103 of fermentation

text: Lebanon

text: Mount Lebanon, Chouf

text: Labneh Ambaris during fermentation

text: food metagenome

text: food metagenome

text: Labneh Ambaris during fermentation, U-D103


text: INRAE

text: public

text: Reine Abi Khalil

text: Labneh Ambaris sample collected during fermentation in a New jar at Day 2 of fermentation

text: Lebanon

text: Mount Lebanon, Chouf

text: Labneh Ambaris during fermentation

text: food metagenome

text: food metagenome

text: Labneh Ambaris during fermentation, N-D2


text: INRAE

text: public

text: Reine Abi Khalil

text: Labneh Ambaris sample collected during fermentation in a New jar at Day 4 of fermentation

text: Lebanon

text: Mount Lebanon, Chouf

text: Labneh Ambaris during fermentation

text: food metagenome

text: food metagenome

text: Labneh Ambaris during fermentation, N-D4


text: INRAE

text: public

text: Reine Abi Khalil

text: Labneh Ambaris sample collected during fermentation in a New jar at Day 7 of fermentation

text: Lebanon

text: Mount Lebanon, Chouf

text: Labneh Ambaris during fermentation

text: food metagenome

text: food metagenome

text: Labneh Ambaris during fermentation, N-D7


text: INRAE

text: public

text: Reine Abi Khalil

text: Labneh Ambaris sample collected during fermentation in a New jar at Day 10 of fermentation

text: Lebanon

text: Mount Lebanon, Chouf

text: Labneh Ambaris during fermentation

text: food metagenome

text: food metagenome

text: Labneh Ambaris during fermentation, N-D10


text: INRAE

text: public

text: Reine Abi Khalil

text: Labneh Ambaris sample collected during fermentation in a New jar at Day 29 of fermentation

text: Lebanon

text: Mount Lebanon, Chouf

text: Labneh Ambaris during fermentation

text: food metagenome

text: food metagenome

text: Labneh Ambaris during fermentation, N-D29


text: INRAE

text: public

text: Reine Abi Khalil

text: Labneh Ambaris sample collected during fermentation in a New jar at Day 47 of fermentation

text: Lebanon

text: Mount Lebanon, Chouf

text: Labneh Ambaris during fermentation

text: food metagenome

text: food metagenome

text: Labneh Ambaris during fermentation, N-D47


text: INRAE

text: public

text: Reine Abi Khalil

text: Labneh Ambaris sample collected during fermentation in a New jar at Day 93 of fermentation

text: Lebanon

text: Mount Lebanon, Chouf

text: Labneh Ambaris during fermentation

text: food metagenome

text: food metagenome

text: Labneh Ambaris during fermentation, N-D93


text: INRAE

text: public

text: Reine Abi Khalil

text: Labneh Ambaris sample collected during fermentation in a New jar at Day 98 of fermentation

text: Lebanon

text: Mount Lebanon, Chouf

text: Labneh Ambaris during fermentation

text: food metagenome

text: food metagenome

text: Labneh Ambaris during fermentation, N-D98


text: INRAE

text: public

text: Reine Abi Khalil

text: Labneh Ambaris sample collected during fermentation in a New jar at Day 100 of fermentation

text: Lebanon

text: Mount Lebanon, Chouf

text: Labneh Ambaris during fermentation

text: food metagenome

text: food metagenome

text: Labneh Ambaris during fermentation, N-D100


text: INRAE

text: public

text: Reine Abi Khalil

text: Labneh Ambaris sample collected during fermentation in a New jar at Day 103 of fermentation

text: Lebanon

text: Mount Lebanon, Chouf

text: Labneh Ambaris during fermentation

text: food metagenome

text: food metagenome

text: Labneh Ambaris during fermentation, N-D103


text: INRAE

text: public

text: Reine Abi Khalil

text: Bacterial mock community replicate 1

text: Lebanon

text: not relevant

text: not relevant

text: food metagenome

text: food metagenome

text: Bacterial mock community replicate 1


text: INRAE

text: public

text: Reine Abi Khalil

text: Bacterial mock community replicate 2

text: Lebanon

text: not relevant

text: not relevant

text: food metagenome

text: food metagenome

text: Bacterial mock community replicate 2


text: INRAE

text: public

text: Reine Abi Khalil

text: Bacterial mock community replicate 3

text: Lebanon

text: not relevant

text: not relevant

text: food metagenome

text: food metagenome

text: Bacterial mock community replicate 3


text: INRAE

text: public

text: Reine Abi Khalil

text: Yeast mock community replicate 1

text: Lebanon

text: not relevant

text: not relevant

text: food metagenome

text: food metagenome

text: Yeast mock community replicate 1


text: INRAE

text: public

text: Reine Abi Khalil

text: Yeast mock community replicate 2

text: Lebanon

text: not relevant

text: not relevant

text: food metagenome

text: food metagenome

text: Yeast mock community replicate 2


text: INRAE

text: public

text: Reine Abi Khalil

text: Yeast mock community replicate 3

text: Lebanon

text: not relevant

text: not relevant

text: food metagenome

text: food metagenome

text: Yeast mock community replicate 3


text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metawrap v1.3

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR14629561 of study SRP321042.

text: feces

characteristic: environmental medium

text: Hong Kong

unit: DD

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: digestive tube

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Muribaculaceae bacterium

text: Fecal DNA from non-pregnant and pregnant (E9.5) C57BL/6J WT female mice

characteristic: project name

characteristic: sample derived from

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14629561_bin.13_metawrap_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metawrap v1.3

characteristic: binning software

text: mouse digestive system

text: EBI-EMG

text: CheckM

characteristic: description

text: feces

text: Hong Kong

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome-assembled genome

text: mouse gut metagenome

text: digestive tube

text: mouse gut metagenome

text: Lactobacillus intestinalis

characteristic: organism

text: Lactobacillus intestinalis

text: Illumina HiSeq 4000

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus intestinalis

text: multi-marker approach

text: Metagenome-assembled genome: SRR14629561_bin.17_metawrap_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: SPAdes v3.15.3

text: metawrap v1.3

text: mouse digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: Hong Kong

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: digestive tube

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__;f__;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14629561_bin.22_metawrap_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metawrap v1.3

characteristic: binning software

text: mouse digestive system

text: EBI-EMG

text: CheckM

characteristic: description

text: feces

text: Hong Kong

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome-assembled genome

text: mouse gut metagenome

text: digestive tube

text: mouse gut metagenome

text: uncultured Porphyromonadaceae bacterium

characteristic: organism

text: uncultured Porphyromonadaceae bacterium

text: Illumina HiSeq 4000

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR14629561_bin.29_metawrap_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: SPAdes v3.15.3

text: metawrap v1.3

text: mouse digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: Hong Kong

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: digestive tube

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14629561_bin.32_metawrap_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metawrap v1.3

characteristic: binning software

text: mouse digestive system

text: EBI-EMG

text: CheckM

characteristic: description

text: feces

text: Hong Kong

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome-assembled genome

text: mouse gut metagenome

text: digestive tube

text: mouse gut metagenome

text: uncultured Porphyromonadaceae bacterium

characteristic: organism

text: uncultured Porphyromonadaceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR14629561_bin.33_metawrap_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: SPAdes v3.15.3

text: metawrap v1.3

text: mouse digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: Hong Kong

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: digestive tube

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14629561_bin.5_metawrap_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metawrap v1.3

characteristic: binning software

text: mouse digestive system

text: EBI-EMG

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR14629562 of study SRP321042.

characteristic: description

text: feces

text: Hong Kong

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome-assembled genome

text: mouse gut metagenome

text: digestive tube

text: mouse gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR14629562_bin.17_metawrap_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: SPAdes v3.15.3

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

text: metawrap v1.3

text: mouse digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: Hong Kong

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: digestive tube

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnoclostridium sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnoclostridium sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Lachnoclostridium;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14629562_bin.19_metawrap_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metawrap v1.3

characteristic: binning software

text: mouse digestive system

text: EBI-EMG

text: CheckM

characteristic: description

text: feces

text: Hong Kong

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome-assembled genome

text: mouse gut metagenome

text: digestive tube

text: mouse gut metagenome

text: Faecalibaculum rodentium

characteristic: organism

text: Fecal DNA from non-pregnant and pregnant (E9.5) C57BL/6J WT female mice

text: Faecalibaculum rodentium

text: Illumina HiSeq 4000

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Faecalibaculum;s__Faecalibaculum rodentium

text: multi-marker approach

text: Metagenome-assembled genome: SRR14629562_bin.31_metawrap_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: SPAdes v3.15.3

text: metawrap v1.3

text: mouse digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: Hong Kong

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: digestive tube

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Bacteroidales bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14629562_bin.34_metawrap_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metawrap v1.3

characteristic: binning software

text: mouse digestive system

text: EBI-EMG

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR14629563 of study SRP321042.

characteristic: description

text: feces

text: Hong Kong

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome-assembled genome

text: mouse gut metagenome

text: digestive tube

text: mouse gut metagenome

text: uncultured Alphaproteobacteria bacterium

characteristic: organism

text: Illumina HiSeq 4000

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__;f__;g__;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR14629563_bin.11_metawrap_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: SPAdes v3.15.3

text: metawrap v1.3

text: mouse digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: Hong Kong

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: digestive tube

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Rickettsiales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Rickettsiales bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14629563_bin.19_metawrap_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metawrap v1.3

characteristic: binning software

text: mouse digestive system

text: EBI-EMG

text: CheckM

characteristic: description

text: feces

text: Hong Kong

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome-assembled genome

text: mouse gut metagenome

text: digestive tube

text: mouse gut metagenome

text: uncultured Porphyromonadaceae bacterium

characteristic: organism

text: uncultured Porphyromonadaceae bacterium

text: Illumina HiSeq 4000

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR14629563_bin.22_metawrap_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: SPAdes v3.15.3

text: metawrap v1.3

text: mouse digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: Hong Kong

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: digestive tube

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Porphyromonadaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Porphyromonadaceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14629563_bin.27_metawrap_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metawrap v1.3

characteristic: binning software

text: mouse digestive system

text: EBI-EMG

text: CheckM

characteristic: description

text: feces

text: Hong Kong

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome-assembled genome

text: mouse gut metagenome

text: digestive tube

text: mouse gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 4000

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR14629563_bin.29_metawrap_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: SPAdes v3.15.3

text: metawrap v1.3

text: mouse digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: Hong Kong

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: digestive tube

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

text: Fecal DNA from non-pregnant and pregnant (E9.5) C57BL/6J WT female mice

characteristic: project name

characteristic: sample derived from

text: uncultured Bacteroidales bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14629563_bin.32_metawrap_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metawrap v1.3

characteristic: binning software

text: mouse digestive system

text: EBI-EMG

text: CheckM

characteristic: description

text: feces

text: Hong Kong

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome-assembled genome

text: mouse gut metagenome

text: digestive tube

text: mouse gut metagenome

text: uncultured Azospirillum sp.

characteristic: organism

text: uncultured Azospirillum sp.

text: Illumina HiSeq 4000

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Azospirillum;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR14629563_bin.34_metawrap_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: SPAdes v3.15.3

text: metawrap v1.3

text: mouse digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR14629563 of study SRP321042.

text: feces

characteristic: environmental medium

text: Hong Kong

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: digestive tube

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Porphyromonadaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Porphyromonadaceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14629563_bin.5_metawrap_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metawrap v1.3

characteristic: binning software

text: mouse digestive system

text: EBI-EMG

text: CheckM

characteristic: description

text: feces

text: Hong Kong

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome-assembled genome

text: mouse gut metagenome

text: digestive tube

text: mouse gut metagenome

text: uncultured Erysipelotrichaceae bacterium

characteristic: organism

text: Illumina HiSeq 4000

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR14629563_bin.6_metawrap_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: SPAdes v3.15.3

text: metawrap v1.3

text: mouse digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR14629564 of study SRP321042.

text: feces

characteristic: environmental medium

text: Hong Kong

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: digestive tube

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14629564_bin.11_metawrap_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metawrap v1.3

characteristic: binning software

text: mouse digestive system

text: EBI-EMG

text: CheckM

characteristic: description

text: feces

text: Hong Kong

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome-assembled genome

text: mouse gut metagenome

text: digestive tube

text: mouse gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR14629564_bin.16_metawrap_v1.3_MAG

characteristic: title