characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339288

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-005__bin72


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT defaults, SemiBin defaults with rabbit_gut model, metaWRAP bin_refinement module

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339292

text: feces

text: France

unit: DD

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-011__bin23

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339304

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-023__bin71


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339293

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-012__bin55

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339312

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Eubacteriaceae bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Eubacteriaceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-032__bin14


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Eubacteriaceae bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Eubacteriaceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-032__bin33

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Eubacteriaceae bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Eubacteriaceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-032__bin67


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339299

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-018__bin4

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-023__bin39


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339305

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-024__bin74

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339286

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-003-2__bin16


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT defaults, SemiBin defaults with rabbit_gut model, metaWRAP bin_refinement module

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-003-2__bin47

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-003-2__bin7


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339287

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-004__bin79

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339304

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-023__bin24


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339309

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-028__bin74

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339310

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-030__bin20


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339294

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-013__bin46

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339301

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-020__bin17


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339302

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-021__bin21

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT defaults, SemiBin defaults with rabbit_gut model, metaWRAP bin_refinement module

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339307

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-026__bin61


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339285

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-002__bin74

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339286

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-003-2__bin42


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339290

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-008__bin13

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339291

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-010__bin5


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339292

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-011__bin15

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339293

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-012__bin85


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339297

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-016__bin37

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT defaults, SemiBin defaults with rabbit_gut model, metaWRAP bin_refinement module

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339300

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-019__bin22


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339301

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-020__bin95

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339302

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-021__bin41


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339304

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-023__bin68

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339310

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-030__bin47


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339312

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-032__bin73

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339313

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-033__bin20


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-023__bin84

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT defaults, SemiBin defaults with rabbit_gut model, metaWRAP bin_refinement module

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339305

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-024__bin84


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339285

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Acetatifactor sp.

characteristic: organism

text: MicroReset Rabbit

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-002__bin88

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339287

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Acetatifactor sp.

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-004__bin65


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339293

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Acetatifactor sp.

characteristic: organism

text: MicroReset Rabbit

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-012__bin95

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339302

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Acetatifactor sp.

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-021__bin33


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Acetatifactor sp.

characteristic: organism

text: MicroReset Rabbit

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-024__bin39

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Acetatifactor sp.

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-024__bin94


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339310

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Acetatifactor sp.

characteristic: organism

text: MicroReset Rabbit

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-030__bin53

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339312

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Acetatifactor sp.

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-032__bin56


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

text: MetaBAT defaults, SemiBin defaults with rabbit_gut model, metaWRAP bin_refinement module

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339284

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Acetatifactor sp.

characteristic: organism

text: MicroReset Rabbit

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-001__bin28

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Acetatifactor sp.

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-001__bin37


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Acetatifactor sp.

characteristic: organism

text: MicroReset Rabbit

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-001__bin5

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339285

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Acetatifactor sp.

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-002__bin8


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339286

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Acetatifactor sp.

characteristic: organism

text: MicroReset Rabbit

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-003-2__bin4

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339287

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Acetatifactor sp.

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-004__bin80


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339288

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Acetatifactor sp.

characteristic: organism

text: MicroReset Rabbit

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-005__bin62

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Acetatifactor sp.

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-005__bin91


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339293

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Acetatifactor sp.

characteristic: organism

text: MicroReset Rabbit

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-012__bin4

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT defaults, SemiBin defaults with rabbit_gut model, metaWRAP bin_refinement module

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Acetatifactor sp.

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-012__bin54


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339310

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Acetatifactor sp.

characteristic: organism

text: MicroReset Rabbit

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-030__bin7

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339312

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Acetatifactor sp.

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-032__bin120


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Acetatifactor sp.

characteristic: organism

text: MicroReset Rabbit

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-032__bin19

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339285

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-002__bin67


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339304

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-023__bin55

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-002__bin64


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-002__bin9

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339305

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-024__bin35


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339299

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-018__bin18

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT defaults, SemiBin defaults with rabbit_gut model, metaWRAP bin_refinement module

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-030__bin63


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339293

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-012__bin90

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-024__bin24


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339309

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-028__bin67

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339285

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-002__bin73


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-002__bin87

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-002__bin83


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339286

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-003-2__bin19

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-003-2__bin22


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339289

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-007__bin20

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT defaults, SemiBin defaults with rabbit_gut model, metaWRAP bin_refinement module

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339290

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-008__bin26


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339291

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-010__bin15

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339295

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-014__bin33


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339296

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-015__bin17

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339304

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-023__bin18


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-023__bin36

characteristic: title


characteristic: ENA-CHECKLIST

text: INRA-META

text: public

text: SPAdes 3.15.3

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

text: host-associated habitat

characteristic: collection date

characteristic: completeness score

text: checkm v1.1.3

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: rabbit gut

text: host-associated habitat

characteristic: local environmental context

text: rabbit gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

text: MicroReset Rabbit

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Lapin-023__bin50


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: SPAdes 3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaBAT v2.12.1, SemiBin, metaWRAP v1.3

characteristic: binning software

text: host-associated habitat

characteristic: broad-scale environmental context

text: checkm v1.1.3

text: This sample represents a metagenomic bin from the metagenomic sample ERS14339307

text: feces

text: France

text: metagenome-assembled genome

text: rabbit gut

text: host-associated habitat

text: rabbit gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: MicroReset Rabbit

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Lapin-026__bin14

characteristic: title