E-MTAB-12262:Heterocapsa RNA

text: public

text: E-MTAB-12262:Heterocapsa RNA

tag: Namespace:Department of Gene Technology, School of Engineering Sciences in Chemistry, Biotechnology and Health,SciLifeLab, KTH Royal Institute of Technology, Stockholm, Sweden

text: ArrayExpress

characteristic: broker name

text: Protocols: Sample for bulk RNA was collected by filtering 10 ml of culture in exponential phase (density of cells ≈ 10 mil) on 5 µm polycarbonate filters (Whatman).Filters were placed in cryoprotectant tubes with beads (Zirconium oxide beads, Precellys), amended with 600 µl of RLT buffer (Qiagen) which contained 1% of 2-Mercaptoethanol, shock frozen in liquid nitrogen and stored at -80 °C until further processing. Prior to RNA extraction, sample was taken out of -80, thawed on ice and subjected to bead beating (1x 6000 rmp, Precellys Evolution homogenizer)for 2 min. RNA from samples was further extracted with the RNeasy Qiagen kit (QIAGEN, Inc., Valencia, CA) following the kit instructions. RNA was re-eluted in 30 µl of nuclease free water. Input: RNA Type: Illumina TruSeq Stranded mRNA Option: Poly-A selection Category: default

text: Heterocapsa sp.

text: Heterocapsa sp.

text: Heterocapsa sp.

text: dinoflagellate Heterocapsa sp. CCAP 1125/4

characteristic: strain

text: Heterocapsa RNA


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Department of Cell and Developmental Biology, Department of Internal Medicine, Department of Biomedical Engineering Medicine, University of Michigan Medical School, Ann Arbor, MI

characteristic: Submitter Id

unit: year

characteristic: age

text: ArrayExpress

text: human

characteristic: common name

text: Protocols: Biopsies are collected in complete HYENAC cold medium at the University Hospital. Samples are process for single-cell dissociation, tissue fixation and in vitro culture within a 24hr timepoint of sample collection. To dissociate patient biopsies for scRNA-seq, tissue was placed in a Petri dish with ice-cold 1× HBSS (with Mg2+, Ca2+). To prevent adhesion of cells, all tubes and pipette tips were pre-washed with 1% bovine serum albumin (BSA) in 1× HBSS. The tissue was minced manually using springsqueeze scissors before being transferred to a 15 ml conical flask containing 1% BSA in HBSS. Tubes were spun down at 500 g for 5 min at 10°C, after which excess HBSS was aspirated. Mix 1 from the Neural Tissue Dissociation Kit (Miltenyi, 130-092-628) containing dissociation enzymes and reagents was added and incubated at 10°C for 15 min. Mix 2 from the Neural Tissue Dissociation Kit was added, and the suspension was fluxed through P1000 pipette tips, interspersed with 10 min incubations at 10°C. Flux steps were repeated as needed until cell clumps were no longer visible under a stereomicroscope. Cells were filtered through a 1% BSAcoated 70 μm filter using 1× HBSS, spun down at 500 g for 5 min at 10°C, and resuspended in 500 μl 1× HBSS (with Mg2+, Ca2+). Then 1 ml of RBC Lysis Buffer (Roche, 11814389001) was added, and tubes were incubated on a rocker at 4°C for 15 min. Cells were spun down at 500 g for 5 min at 10° C, then washed twice in 2 ml 1% BSA, being spun down at 500 g for 5 min at 10°C each time. A hemocytometer was used to count cells, and samples were then spun down and resuspended to reach a concentration of 1000 cells/μl and kept on ice. Tissue samples are minced and/or dissociated into single-cells. They are co-culture with sublethally irradiated fibroblast in complete HYENAC medium. Upon reaching 60-80% confluency, cultures are typsinized and passage. Immediately after tissue dissociation, single cell libraries were prepared on the 10x Chromium with a target of 5,000 cells. Chromium Single Cell 3’ Library & Gel Bead Kit v2, 16 rxns PN-120237 was used. Single-cell libraries were prepared using the Chromium Next GEM Single Cell 3′ Library Construction Kit v3.1 according to the manufacturer’s instructions.

characteristic: description

text: adult

characteristic: developmental stage

text: Barrett's esophagus

characteristic: disease

text: 2D esophagus cells expanded in 3T3-J2i feeder layer; complete HYENAC+CBS

characteristic: growth condition

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: esophagus

characteristic: organism part

text: normal tissue adjacent to lesion

characteristic: sampling site

text: Homo sapiens

text: female

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Department of Cell and Developmental Biology, Department of Internal Medicine, Department of Biomedical Engineering Medicine, University of Michigan Medical School, Ann Arbor, MI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

characteristic: broker name

text: human

text: Protocols: Biopsies are collected in complete HYENAC cold medium at the University Hospital. Samples are process for single-cell dissociation, tissue fixation and in vitro culture within a 24hr timepoint of sample collection. To dissociate patient biopsies for scRNA-seq, tissue was placed in a Petri dish with ice-cold 1× HBSS (with Mg2+, Ca2+). To prevent adhesion of cells, all tubes and pipette tips were pre-washed with 1% bovine serum albumin (BSA) in 1× HBSS. The tissue was minced manually using springsqueeze scissors before being transferred to a 15 ml conical flask containing 1% BSA in HBSS. Tubes were spun down at 500 g for 5 min at 10°C, after which excess HBSS was aspirated. Mix 1 from the Neural Tissue Dissociation Kit (Miltenyi, 130-092-628) containing dissociation enzymes and reagents was added and incubated at 10°C for 15 min. Mix 2 from the Neural Tissue Dissociation Kit was added, and the suspension was fluxed through P1000 pipette tips, interspersed with 10 min incubations at 10°C. Flux steps were repeated as needed until cell clumps were no longer visible under a stereomicroscope. Cells were filtered through a 1% BSAcoated 70 μm filter using 1× HBSS, spun down at 500 g for 5 min at 10°C, and resuspended in 500 μl 1× HBSS (with Mg2+, Ca2+). Then 1 ml of RBC Lysis Buffer (Roche, 11814389001) was added, and tubes were incubated on a rocker at 4°C for 15 min. Cells were spun down at 500 g for 5 min at 10° C, then washed twice in 2 ml 1% BSA, being spun down at 500 g for 5 min at 10°C each time. A hemocytometer was used to count cells, and samples were then spun down and resuspended to reach a concentration of 1000 cells/μl and kept on ice. Immediately after tissue dissociation, single cell libraries were prepared on the 10x Chromium with a target of 5,000 cells. Chromium Single Cell 3’ Library & Gel Bead Kit v2, 16 rxns PN-120237 was used. Single-cell libraries were prepared using the Chromium Next GEM Single Cell 3′ Library Construction Kit v3.1 according to the manufacturer’s instructions.

text: adult

text: Barrett's esophagus

text: Homo sapiens

text: Homo sapiens

text: esophagus

text: normal tissue adjacent to lesion

text: Homo sapiens

text: male


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: human

characteristic: common name

characteristic: description

text: adult

text: Barrett's esophagus

text: Homo sapiens

text: Homo sapiens

text: esophagus

text: normal tissue adjacent to lesion

text: Homo sapiens

text: male


text: public

text: ArrayExpress

text: human

text: adult

characteristic: developmental stage

text: Barrett's esophagus

characteristic: disease

characteristic: individual

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: esophagus

characteristic: organism part

text: normal tissue adjacent to lesion

characteristic: sampling site

text: Homo sapiens

text: female


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: ArrayExpress

text: human

text: adult

text: Barrett's esophagus

characteristic: growth condition

text: Homo sapiens

text: Homo sapiens

text: esophagus

text: normal tissue adjacent to lesion

text: Homo sapiens

text: female

characteristic: sex

characteristic: title


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

characteristic: collection date

text: Alexander Imhof, Cedric Howald, Lorenzo Cerutti, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-SRO-5000129222/2022

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: active surveillance not initiated by an outbreak


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000135325/2022

characteristic: organism

characteristic: title


text: SRO

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000134742/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-SRO-5000132211/2022

characteristic: isolate

characteristic: sample capture status


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000129012/2022

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000132250/2022


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-SRO-5000136269/2022

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000136165/2022

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-2209150034/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Dr. Risch

text: public

tag: Namespace:Dr. Risch

text: SIB

text: UNKNOWN;UNKNOWN

text: Nadia Wohlwend, Faina Wehrli, Dominique Fabien Hilti, Sinem Kas, Martin Risch, Thomas Bodmer, Lorenz Risch

text: Switzerland

text: FR

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/FR-Risch-0927R13890/2022

characteristic: isolate

text: other

characteristic: sample capture status


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000135612/2022

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000130692/2022


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Alexander Imhof, Cedric Howald, Lorenzo Cerutti, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-SRO-5000136267/2022

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000131683/2022

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000134785/2022

text: active surveillance in response to outbreak

text: active surveillance not initiated by an outbreak


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-SRO-5000133750/2022

characteristic: isolate

characteristic: sample capture status


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000135361/2022

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000133837/2022


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-SRO-5000129808/2022

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000135818/2022

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000135496/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-SRO-5000135319/2022

characteristic: isolate

characteristic: sample capture status


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000131685/2022

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000129531/2022


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-SRO-5000132270/2022

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

text: Alexander Imhof, Cedric Howald, Lorenzo Cerutti, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000134708/2022

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000130545/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-SRO-5000136312/2022

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000135938/2022

characteristic: organism

text: active surveillance in response to outbreak

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000133635/2022

text: active surveillance not initiated by an outbreak


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-SRO-5000127563/2022

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: SO

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/SO-SRO-5000134566/2022

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000133661/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-SRO-5000135597/2022

characteristic: isolate

characteristic: sample capture status


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000133827/2022

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000133780/2022


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-SRO-5000133804/2022

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: LU

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/LU-SRO-5000134017/2022

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

characteristic: collection date

text: Alexander Imhof, Cedric Howald, Lorenzo Cerutti, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000134620/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-SRO-5000130013/2022

characteristic: isolate

characteristic: sample capture status


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000130192/2022

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000130588/2022

text: Severe acute respiratory syndrome coronavirus 2


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-SRO-5000133622/2022

characteristic: isolate

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SRO

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Spital Langenthal, SRO AG, Labor

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000135308/2022

characteristic: organism

text: active surveillance not initiated by an outbreak

characteristic: title


characteristic: GISAID Accession ID

text: SRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Spital Langenthal, SRO AG, Labor

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SRO-5000134372/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Department of Gene Technology, School of Engineering Sciences in Chemistry, Biotechnology and Health,SciLifeLab, KTH Royal Institute of Technology, Stockholm, Sweden

text: public

text: ArrayExpress

text: Protocols: Cells were collected in exponential phase of the growth concentrated by centrifugation at 8000g for 5 min. Libraries were prepared with Magnatrix 8000+ (Nordiag), an eight-channel robotic workstation capable of running custom made scripts for in-tip magnetic bead separations41. Released mRNA-cDNA hybrids were transferred to the robotic workstation where they underwent second strand synthesis, end repair and in vitro transcription. Following transcription, sequencing adaptors are ligated to the RNA, and another round of cDNA synthesis is performed. Each step in the process is followed by a reaction clean-up step.

characteristic: description

text: Phaeodactylum tricornutum

text: Phaeodactylum tricornutum

text: Phaeodactylum tricornutum

characteristic: spots with single cell detected

text: CCAP 1055/1

characteristic: strain

text: Pha


text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: Heterocapsa sp.

characteristic: organism

text: Heterocapsa sp.

text: Heterocapsa sp.

text: CCAP 1125/4

text: Het

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ArrayExpress

text: Tetrahymena thermophila

text: Tetrahymena thermophila

text: Tetrahymena thermophila


text: public

text: ArrayExpress

text: Protocols: Sample for bulk RNA was collected by filtering 10 ml of culture in exponential phase (density of cells ≈ 10 mil) on 5 µm polycarbonate filters (Whatman).Filters were placed in cryoprotectant tubes with beads (Zirconium oxide beads, Precellys), amended with 600 µl of RLT buffer (Qiagen) which contained 1% of 2-Mercaptoethanol, shock frozen in liquid nitrogen and stored at -80 °C until further processing. For each cell type we collected samples for bulk RNA. Cells were harvested on 5 µm polycarbonate filters (Whatman). Filters were placed in cryoprotectant tubes with beads (Zirconium oxide beads, Precellys), amended with 600 µl of RLT buffer (Qiagen) which contained 1% of 2-Mercaptoethanol, shock frozen in liquid nitrogen and stored at -80 °C until further processing. Prior to RNA extraction, samples were taken out of -80, thawed on ice and subjected to bead beating (1x 6000 rmp, Precellys Evolution homogenizer). P. tricornutum and Heterocapsa sp. samples were treated for 2 min and T. thermophila just vortexed vigorously. RNA from samples was further extracted with the RNeasy Qiagen kit (QIAGEN, Inc., Valencia, CA) following the kit instructions. RNA was re-eluted in 30 µl of nuclease free water. Libraries were prepared with Magnatrix 8000+ (Nordiag), an eight-channel robotic workstation capable of running custom made scripts for in-tip magnetic bead separations41. Released mRNA-cDNA hybrids were transferred to the robotic workstation where they underwent second strand synthesis, end repair and in vitro transcription. Following transcription, sequencing adaptors are ligated to the RNA, and another round of cDNA synthesis is performed. Each step in the process is followed by a reaction clean-up step.

text: Heterocapsa sp.

text: Heterocapsa sp.

text: Heterocapsa sp.

text: non applicable

text: CCAP 1125/4


text: public

text: ArrayExpress

text: Phaeodactylum tricornutum

text: Phaeodactylum tricornutum

text: Phaeodactylum tricornutum

text: non applicable

text: CCAP 1055/1


text: public

text: ArrayExpress

text: Tetrahymena thermophila

text: Tetrahymena thermophila

text: Tetrahymena thermophila

text: non applicable


text: UCSDMI

text: public

text: qiita_sid_10409:10409.04I.epp.1Cayo.May2015

text: monkey chow

characteristic: diet

text: monkey chow, fruit

text: TRUE

characteristic: elevation

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

characteristic: genus

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

characteristic: host scientific name

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

characteristic: latitude

text: adult

characteristic: longitude

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

characteristic: provenance

text: TRUE

characteristic: public

text: UCSDMI

text: feces

text: primate metagenome

characteristic: sort

text: mulatta

characteristic: species

text: Rhesus gut biome and behavior

text: semi-wild


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10409:10409.04Z.epp.69Cayo.May2015

characteristic: Submitter Id

characteristic: description

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: qiita_sid_10409:10409.07D.epp.29Cayo.May2015

text: monkey chow

characteristic: diet

text: monkey chow, fruit

text: TRUE

characteristic: elevation

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

characteristic: title

text: semi-wild


text: UCSDMI

text: public

text: qiita_sid_10409:10409.07D.epp.59Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

characteristic: genus

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

characteristic: host scientific name

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

characteristic: latitude

text: adult

characteristic: longitude

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

characteristic: provenance

text: TRUE

characteristic: public

text: UCSDMI

text: feces

text: primate metagenome

characteristic: sort

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10409:10409.0B8.epp.21Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

characteristic: species

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: qiita_sid_10409:10409.0B8.epp.65Cayo.May2015

characteristic: Submitter Id

characteristic: description

text: monkey chow

characteristic: diet

text: monkey chow, fruit

text: TRUE

characteristic: elevation

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

text: public

text: qiita_sid_10409:10409.0E8.swab.0E8Cayo.May2015.a

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

characteristic: genus

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

characteristic: host scientific name

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

characteristic: latitude

text: adult

characteristic: longitude

text: primate metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: Cayo Santiago

characteristic: provenance

text: TRUE

text: UCSDMI

text: rectal swab

text: primate metagenome

text: mulatta

characteristic: title

text: Rhesus gut biome and behavior

text: semi-wild


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

characteristic: INSDC status

text: qiita_sid_10409:10409.0L4.swab.0L4Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

characteristic: public

text: UCSDMI

text: rectal swab

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: qiita_sid_10409:10409.0L4.tube.38Cayo.May2015

characteristic: Submitter Id

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

characteristic: sort

text: mulatta

characteristic: species

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

text: public

text: qiita_sid_10409:10409.17C.epp.17Cayo.May2015

characteristic: description

text: monkey chow

characteristic: diet

text: monkey chow, fruit

text: TRUE

characteristic: elevation

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

characteristic: genus

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

characteristic: host scientific name

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

characteristic: latitude

text: adult

characteristic: longitude

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: qiita_sid_10409:10409.17C.epp.31Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: Cayo Santiago

characteristic: provenance

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

characteristic: title

text: semi-wild


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10409:10409.17K.swab.17KCayo.May2015.a

characteristic: Submitter Id

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

characteristic: public

text: UCSDMI

text: rectal swab

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

text: public

text: qiita_sid_10409:10409.17K.swab.17KCayo.May2015.b

characteristic: description

text: monkey chow

characteristic: diet

text: monkey chow, fruit

text: TRUE

characteristic: elevation

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

characteristic: genus

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

characteristic: host scientific name

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: rectal swab

text: primate metagenome

characteristic: sort

text: mulatta

characteristic: species

text: Rhesus gut biome and behavior

text: semi-wild


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: qiita_sid_10409:10409.18Z.epp.30Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

characteristic: latitude

text: adult

characteristic: longitude

text: primate metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10409:10409.19T.swab.19TCayo.May2015.a

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

characteristic: provenance

text: TRUE

text: UCSDMI

text: rectal swab

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

characteristic: title

text: semi-wild


text: UCSDMI

text: public

text: qiita_sid_10409:10409.19T.swab.19TCayo.May2015.b

characteristic: Submitter Id

characteristic: description

text: monkey chow

characteristic: diet

text: monkey chow, fruit

text: TRUE

characteristic: elevation

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

characteristic: genus

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

characteristic: host scientific name

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

characteristic: public

text: UCSDMI

text: rectal swab

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: qiita_sid_10409:10409.1A3.epp.23Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

characteristic: latitude

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

characteristic: sort

text: mulatta

characteristic: species

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10409:10409.28B.epp.38Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

characteristic: longitude

text: primate metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

text: public

text: qiita_sid_10409:10409.2K5.swab.2K5Cayo.May2015

characteristic: Submitter Id

characteristic: description

text: monkey chow

characteristic: diet

text: monkey chow, fruit

text: TRUE

characteristic: elevation

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

characteristic: genus

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

characteristic: provenance

text: TRUE

text: UCSDMI

text: rectal swab

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

characteristic: title

text: semi-wild


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: qiita_sid_10409:10409.2K5.tube.33Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

characteristic: host scientific name

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

characteristic: latitude

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

characteristic: public

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10409:10409.30C.epp.2Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

characteristic: sort

text: mulatta

characteristic: species

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

text: public

text: qiita_sid_10409:10409.30C.epp.5Cayo.May2015

characteristic: Submitter Id

characteristic: description

text: monkey chow

characteristic: diet

text: monkey chow, fruit

text: TRUE

characteristic: elevation

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

characteristic: genus

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

characteristic: longitude

text: primate metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: qiita_sid_10409:10409.30L.epp.61Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

characteristic: host scientific name

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

characteristic: provenance

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

characteristic: title

text: semi-wild


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10409:10409.31S.epp.27Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

characteristic: latitude

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

characteristic: public

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

text: public

text: qiita_sid_10409:10409.33T.swab.33TCayo.May2015.a

characteristic: Submitter Id

characteristic: description

text: monkey chow

characteristic: diet

text: monkey chow, fruit

text: TRUE

characteristic: elevation

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

characteristic: genus

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: rectal swab

text: primate metagenome

characteristic: sort

text: mulatta

characteristic: species

text: Rhesus gut biome and behavior

text: semi-wild


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: qiita_sid_10409:10409.33T.swab.33TCayo.May2015.b

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

characteristic: host scientific name

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

characteristic: longitude

text: primate metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: rectal swab

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10409:10409.33V.swab.33VCayo.May2015.a

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

characteristic: provenance

text: TRUE

text: UCSDMI

text: rectal swab

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

characteristic: title

text: semi-wild


text: UCSDMI

text: public

text: qiita_sid_10409:10409.33V.swab.33VCayo.May2015.b

characteristic: Submitter Id

characteristic: description

text: monkey chow

characteristic: diet

text: monkey chow, fruit

text: TRUE

characteristic: elevation

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

characteristic: genus

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

characteristic: latitude

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

characteristic: public

text: UCSDMI

text: rectal swab

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: qiita_sid_10409:10409.36Z.epp.15Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

characteristic: host scientific name

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

characteristic: sort

text: mulatta

characteristic: species

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10409:10409.3B9.epp.56Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

characteristic: longitude

text: primate metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

text: public

text: qiita_sid_10409:10409.42L.epp.82Cayo.May2015

characteristic: Submitter Id

characteristic: description

text: monkey chow

characteristic: diet

text: monkey chow, fruit

text: TRUE

characteristic: elevation

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

characteristic: genus

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

characteristic: provenance

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

characteristic: title

text: semi-wild


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: qiita_sid_10409:10409.42T.epp.72Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

characteristic: host scientific name

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

characteristic: latitude

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

characteristic: public

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10409:10409.42T.swab.42TCayo.May2015.a

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: rectal swab

text: primate metagenome

characteristic: sort

text: mulatta

characteristic: species

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

text: public

text: qiita_sid_10409:10409.42T.swab.42TCayo.May2015.b

characteristic: Submitter Id

characteristic: description

text: monkey chow

characteristic: diet

text: monkey chow, fruit

text: TRUE

characteristic: elevation

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

characteristic: genus

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

characteristic: longitude

text: primate metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: rectal swab

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: qiita_sid_10409:10409.4C2.epp.13Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

characteristic: host scientific name

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

characteristic: provenance

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

characteristic: title

text: semi-wild


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10409:10409.5B0.epp.10Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

characteristic: latitude

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

characteristic: public

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

text: public

text: qiita_sid_10409:10409.5C0.epp.35Cayo.May2015

characteristic: Submitter Id

characteristic: description

text: monkey chow

characteristic: diet

text: monkey chow, fruit

text: TRUE

characteristic: elevation

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

characteristic: genus

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

characteristic: sort

text: mulatta

characteristic: species

text: Rhesus gut biome and behavior

text: semi-wild


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: qiita_sid_10409:10409.5C0.epp.58Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

characteristic: host scientific name

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

characteristic: longitude

text: primate metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: qiita_sid_10409:10409.5K5.swab.5K5Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

characteristic: provenance

text: TRUE

text: UCSDMI

text: rectal swab

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

characteristic: title

text: semi-wild


text: UCSDMI

text: public

text: qiita_sid_10409:10409.5K5.tube.24Cayo.May2015

characteristic: Submitter Id

characteristic: description

text: monkey chow

characteristic: diet

text: monkey chow, fruit

text: TRUE

characteristic: elevation

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

characteristic: genus

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

characteristic: latitude

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

characteristic: public

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: qiita_sid_10409:10409.5L7.swab.5L7Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

characteristic: host scientific name

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: rectal swab

text: primate metagenome

text: mulatta

characteristic: species

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_10409:10409.5L7.tube.35Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

characteristic: longitude

text: primate metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

characteristic: sort

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

text: public

characteristic: SRA accession

text: qiita_sid_10409:10409.60E.epp.16Cayo.May2015

characteristic: Submitter Id

characteristic: description

text: monkey chow

characteristic: diet

text: monkey chow, fruit

text: TRUE

characteristic: elevation

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

characteristic: provenance

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

characteristic: title

text: semi-wild


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: qiita_sid_10409:10409.60T.epp.44Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

characteristic: genus

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

characteristic: latitude

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

characteristic: public

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_10409:10409.60T.epp.67Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

characteristic: host scientific name

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

characteristic: longitude

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

characteristic: species

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

text: public

characteristic: SRA accession

text: qiita_sid_10409:10409.60T.swab.60TCayo.May2015.a

characteristic: Submitter Id

characteristic: description

text: monkey chow

characteristic: diet

text: monkey chow, fruit

text: TRUE

characteristic: elevation

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: rectal swab

text: primate metagenome

characteristic: sort

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: qiita_sid_10409:10409.60T.swab.60TCayo.May2015.b

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

characteristic: genus

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

characteristic: provenance

text: TRUE

text: UCSDMI

text: rectal swab

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

characteristic: title

text: semi-wild


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_10409:10409.61D.epp.68Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

characteristic: host scientific name

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

characteristic: latitude

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

characteristic: public

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

text: public

characteristic: SRA accession

text: qiita_sid_10409:10409.62V.epp.51Cayo.May2015

characteristic: Submitter Id

characteristic: description

text: monkey chow

characteristic: diet

text: monkey chow, fruit

text: TRUE

characteristic: elevation

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

characteristic: longitude

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

characteristic: species

text: Rhesus gut biome and behavior

text: semi-wild


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: qiita_sid_10409:10409.64D.epp.24Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

characteristic: genus

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

characteristic: sort

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_10409:10409.64D.epp.6Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

characteristic: host scientific name

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

characteristic: provenance

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

characteristic: title

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

text: public

characteristic: SRA accession

text: qiita_sid_10409:10409.64P.epp.12Cayo.May2015

characteristic: Submitter Id

characteristic: description

text: monkey chow

characteristic: diet

text: monkey chow, fruit

text: TRUE

characteristic: elevation

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

characteristic: latitude

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

characteristic: public

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: qiita_sid_10409:10409.64P.epp.32Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

characteristic: genus

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

characteristic: longitude

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

characteristic: species

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_10409:10409.68V.epp.46Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

characteristic: host scientific name

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

characteristic: sort

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

text: public

characteristic: SRA accession

text: qiita_sid_10409:10409.6C0.epp.14Cayo.May2015

characteristic: Submitter Id

characteristic: description

text: monkey chow

characteristic: diet

text: monkey chow, fruit

text: TRUE

characteristic: elevation

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

characteristic: provenance

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

characteristic: title

text: semi-wild


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: qiita_sid_10409:10409.6K6.swab.6K6Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

characteristic: genus

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

characteristic: latitude

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

characteristic: public

text: UCSDMI

text: rectal swab

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_10409:10409.6K6.tube.36Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

characteristic: host scientific name

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

characteristic: longitude

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

characteristic: species

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

text: public

characteristic: SRA accession

text: qiita_sid_10409:10409.74S.epp.53Cayo.May2015

characteristic: Submitter Id

characteristic: description

text: monkey chow

characteristic: diet

text: monkey chow, fruit

text: TRUE

characteristic: elevation

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

characteristic: organism

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

characteristic: sort

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: qiita_sid_10409:10409.74S.epp.7Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

characteristic: genus

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

characteristic: provenance

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

characteristic: title

text: semi-wild


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: qiita_sid_10409:10409.7B3.epp.64Cayo.May2015

text: monkey chow

text: monkey chow, fruit

text: TRUE

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

characteristic: host scientific name

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

characteristic: latitude

text: adult

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

characteristic: public

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

text: Rhesus gut biome and behavior

text: semi-wild


text: UCSDMI

text: public

characteristic: SRA accession

text: qiita_sid_10409:10409.7D8.epp.34Cayo.May2015

characteristic: Submitter Id

characteristic: description

text: monkey chow

characteristic: diet

text: monkey chow, fruit

text: TRUE

characteristic: elevation

text: Tropical broadleaf forest biome

text: animal-associated habitat

text: feces

text: host-associated

text: Macaca

text: USA territory:Puerto Rico:Cayo Santiago

text: hind-gut fermenters

text: Macaca mulatta

text: not provided

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: rhesus macaque

text: Cercopithecidae

text: primates

text: Primate

text: adult

characteristic: longitude

text: primate metagenome

text: UCSDMI

text: TRUE

text: Cayo Santiago

text: TRUE

text: UCSDMI

text: feces

text: primate metagenome

text: mulatta

characteristic: species

text: Rhesus gut biome and behavior

text: semi-wild