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characteristic: organism

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characteristic: ENA-CHECKLIST

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text: public

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characteristic: organism

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text: Trestan Pillonel, Damien Jacot, Sébastien Aeby, Gilbert Greub, Claire Bertelli

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characteristic: organism

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characteristic: GISAID Accession ID

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characteristic: collecting institution

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characteristic: ENA-CHECKLIST

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characteristic: GISAID Accession ID

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characteristic: organism

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characteristic: ENA-CHECKLIST

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characteristic: External Id

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characteristic: collecting institution

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characteristic: title


characteristic: GISAID Accession ID

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characteristic: collecting institution

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text: hCoV-19/Switzerland/VD-CHUV-GEN13984/2022


characteristic: ENA-CHECKLIST

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text: hCoV-19/Switzerland/VD-CHUV-GEN13935/2022

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characteristic: GISAID Accession ID

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text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN13927/2022

characteristic: organism

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characteristic: collecting institution

characteristic: collection date

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text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN13957/2022


characteristic: GISAID Accession ID

characteristic: INSDC center name

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text: public

text: SIB

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text: Trestan Pillonel, Damien Jacot, Sébastien Aeby, Gilbert Greub, Claire Bertelli

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characteristic: host health state

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text: hCoV-19/Switzerland/VD-CHUV-GEN13994/2022

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text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN13975/2022

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

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text: public

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text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

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text: restricted access

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text: hCoV-19/Switzerland/VD-CHUV-GEN13924/2022


characteristic: ENA-CHECKLIST

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text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN13937/2022

characteristic: organism

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text: public

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text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

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text: Human

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text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN13964/2022

text: Severe acute respiratory syndrome coronavirus 2


characteristic: GISAID Accession ID

characteristic: INSDC center name

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text: public

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text: EHNV, CH-1400 Yverdon, Switzerland

text: Switzerland

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text: hCoV-19/Switzerland/VD-CHUV-GEN13959/2022

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characteristic: External Id

text: Laboratory of genomics and metagenomics, Institute of Microbiology, University Hospital Centre and University of Lausanne, Switzerland

text: public

characteristic: INSDC status

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text: SIB

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text: CHUV, CH-1011 Lausanne, Switzerland

text: Switzerland

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text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN13956/2022

characteristic: organism

characteristic: title


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characteristic: INSDC center name

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text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

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text: VD

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text: Human

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text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN13972/2022

text: active surveillance not initiated by an outbreak


characteristic: ENA-CHECKLIST

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text: public

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text: EHNV, CH-1400 Yverdon, Switzerland

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characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

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text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN13976/2022

characteristic: isolate

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characteristic: GISAID Accession ID

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text: public

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text: EHNV, CH-1400 Yverdon, Switzerland

text: Switzerland

text: VD

text: Human

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text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN13992/2022

characteristic: organism

characteristic: title


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characteristic: External Id

text: public

text: SIB

text: EHNV, CH-1400 Yverdon, Switzerland

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

characteristic: geographic location (region and locality)

text: Human

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text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN13958/2022


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: EHNV, CH-1400 Yverdon, Switzerland

text: Trestan Pillonel, Damien Jacot, Sébastien Aeby, Gilbert Greub, Claire Bertelli

text: Switzerland

text: VD

text: Human

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characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN13933/2022

characteristic: isolate

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characteristic: ENA-CHECKLIST

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text: CHUV, CH-1011 Lausanne, Switzerland

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN13987/2022

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN13990/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: EHNV, CH-1400 Yverdon, Switzerland

text: Switzerland

text: VD

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN13973/2022

characteristic: isolate

characteristic: sample capture status


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: EHNV, CH-1400 Yverdon, Switzerland

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN13983/2022

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN13925/2022


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: EHNV, CH-1400 Yverdon, Switzerland

text: Switzerland

text: VD

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN13961/2022

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIPH

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

text: S. pyogenes

characteristic: common name

text: GAS routine sample

characteristic: description

text: Norway

text: not provided

text: Homo sapiens

text: blood

text: Streptococcus pyogenes

characteristic: organism

text: Streptococcus pyogenes

characteristic: title


text: Lausanne University Hospital

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:Lausanne University Hospital

characteristic: collection date

text: C. difficile isolated from patient

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38040


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

characteristic: isolate

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38056


characteristic: External Id

text: Lausanne University Hospital

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38091


text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

characteristic: description

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

characteristic: organism

text: Clostridioides difficile

text: C. difficile isolate 38107


text: Lausanne University Hospital

characteristic: INSDC center name

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38123

characteristic: title


text: Lausanne University Hospital

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38139


text: Lausanne University Hospital

text: public

characteristic: collection date

text: C. difficile isolated from patient

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38155


text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38172


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38188


characteristic: ENA-LAST-UPDATE

text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

characteristic: isolate

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38204


characteristic: External Id

text: Lausanne University Hospital

text: public

characteristic: INSDC status

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38570


text: Lausanne University Hospital

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38571


text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

characteristic: description

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

characteristic: organism

text: Clostridioides difficile

text: C. difficile isolate 38572


text: Lausanne University Hospital

characteristic: INSDC center name

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38574

characteristic: title


text: Lausanne University Hospital

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38576


text: Lausanne University Hospital

text: public

characteristic: collection date

text: C. difficile isolated from patient

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38577


text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38578


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38579


characteristic: ENA-LAST-UPDATE

text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

characteristic: isolate

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38582


characteristic: External Id

text: Lausanne University Hospital

text: public

characteristic: INSDC status

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38583


text: Lausanne University Hospital

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38584


text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

characteristic: description

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

characteristic: organism

text: Clostridioides difficile

text: C. difficile isolate 38586


text: Lausanne University Hospital

characteristic: INSDC center name

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38587

characteristic: title


text: Lausanne University Hospital

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38588


text: Lausanne University Hospital

text: public

characteristic: collection date

text: C. difficile isolated from patient

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38590


text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38591


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38597


characteristic: ENA-LAST-UPDATE

text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

characteristic: isolate

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38598


characteristic: External Id

text: Lausanne University Hospital

text: public

characteristic: INSDC status

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38600


text: Lausanne University Hospital

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38601


text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

characteristic: description

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

characteristic: organism

text: Clostridioides difficile

text: C. difficile isolate 38602


text: Lausanne University Hospital

characteristic: INSDC center name

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38603

characteristic: title


text: Lausanne University Hospital

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38604


text: Lausanne University Hospital

text: public

characteristic: collection date

text: C. difficile isolated from patient

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38605


text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38606


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38607


characteristic: ENA-LAST-UPDATE

text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

characteristic: isolate

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38608


characteristic: External Id

text: Lausanne University Hospital

text: public

characteristic: INSDC status

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38615


text: Lausanne University Hospital

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38616


text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

characteristic: description

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

characteristic: organism

text: Clostridioides difficile

text: C. difficile isolate 38617


text: Lausanne University Hospital

characteristic: INSDC center name

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38618

characteristic: title


text: Lausanne University Hospital

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38619


text: Lausanne University Hospital

text: public

characteristic: collection date

text: C. difficile isolated from patient

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38621


text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38622


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38623


characteristic: ENA-LAST-UPDATE

text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

characteristic: isolate

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38624


characteristic: External Id

text: Lausanne University Hospital

text: public

characteristic: INSDC status

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38625


text: Lausanne University Hospital

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38626


text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

characteristic: description

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

characteristic: organism

text: Clostridioides difficile

text: C. difficile isolate 38627


text: Lausanne University Hospital

characteristic: INSDC center name

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38628

characteristic: title


text: Lausanne University Hospital

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38629


text: Lausanne University Hospital

text: public

characteristic: collection date

text: C. difficile isolated from patient

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38630


text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38631


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38632


characteristic: ENA-LAST-UPDATE

text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

characteristic: isolate

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38635


characteristic: External Id

text: Lausanne University Hospital

text: public

characteristic: INSDC status

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38636


text: Lausanne University Hospital

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38637


text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

characteristic: description

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

characteristic: organism

text: Clostridioides difficile

text: C. difficile isolate 38638


text: Lausanne University Hospital

characteristic: INSDC center name

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38639

characteristic: title


text: Lausanne University Hospital

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38640


text: Lausanne University Hospital

text: public

characteristic: collection date

text: C. difficile isolated from patient

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38641


text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38642


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38643


characteristic: ENA-LAST-UPDATE

text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

characteristic: isolate

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38644


characteristic: External Id

text: Lausanne University Hospital

text: public

characteristic: INSDC status

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38645


text: Lausanne University Hospital

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38646


text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

characteristic: description

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

characteristic: organism

text: Clostridioides difficile

text: C. difficile isolate 38647


text: Lausanne University Hospital

characteristic: INSDC center name

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38648

characteristic: title


text: Lausanne University Hospital

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38650


text: Lausanne University Hospital

text: public

characteristic: collection date

text: C. difficile isolated from patient

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38651


text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38653


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 38654


characteristic: ENA-LAST-UPDATE

text: Lausanne University Hospital

text: public

text: C. difficile isolated from patient

text: Switzerland

text: not provided

text: Homo Sapiens

characteristic: isolate

text: Stool

text: Clostridioides difficile

text: Clostridioides difficile

text: C. difficile isolate 39053


characteristic: External Id

characteristic: GISAID Accession ID

text: public

characteristic: INSDC status

tag: Namespace:Institute for Infectious Diseases, Bern, Switzerland

text: SIB

characteristic: broker name

text: Institute for Infectious Diseases, University of Bern, Switzerland

characteristic: collecting institution

text: Stefan Neuenschwander, Christian Baumann, Miguel A Terrazos Miani, Sonja Gempeler, Loïc Borcard, Lea Stauber, Cora Sägesser, Pascal Bittel, Peter Keller, Franziska Suter-Riniker, Stephen L Leib, Alban Ramette

characteristic: collector name

text: Switzerland

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-221107_os_14/2022

text: active surveillance in response to outbreak

characteristic: sample capture status


text: Institute for Infectious Diseases, Bern, Switzerland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-221107_os_77/2022

characteristic: organism

text: active surveillance not initiated by an outbreak

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: public

characteristic: INSDC status

text: SIB

characteristic: broker name

characteristic: collecting institution

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-221107_os_61/2022

characteristic: isolate


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: SIB

characteristic: collector name

text: Switzerland

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-221107_os_73/2022

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: Submitter Id

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-221107_os_53/2022

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SIB

characteristic: broker name

characteristic: collecting institution

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-221107_os_13/2022

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

characteristic: collector name

text: Switzerland

text: BE

characteristic: geographic location (region and locality)

text: Human

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