E-MTAB-11379:Sample 1

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11379:Sample 1

text: ArrayExpress

text: human

text: Protocols: Fresh frozen samples, FFPE samples and buffycoat extracted from blood DNA was extracted from fresh-frozen and buffy coat samples using the Qiagen DNA mini kit (Cat No./ID: 51306) and from FFPE samples using the Qiagen DNA FFPE kit (Cat No./ID: 56404), as per the manufacturer’s protocols. We used the Agilent V4+UTR (71M) capture kit for library preparation, with a read length of 150 bp, as per manufacturer’s protocol. Briefly, the qualified genomic DNA sample was randomly fragmented into fragments with a base pair peak of 150 to 200 bp; adapters were then ligated to both ends of the resulting fragments. The adapter-ligated templates were purified using the Agencourt AMPure SPRI beads, and fragments with an insert size of approximately 200 bp were extracted. The extracted DNA was amplified using ligation-mediated polymerase chain reaction (LM-PCR), purified, and hybridized to the SureSelect Biotinylated RNA Library (BAITS) for enrichment. Hybridized fragments were bound to the streptavidin beads, whereas non-hybridized fragments were washed off after 24 hr. The captured LM-PCR products were subjected to analysis using the Agilent 2100 Bioanalyzer to estimate the magnitude of enrichment.

text: triple negative breast cancer

text: 1st progression

characteristic: disease staging

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: breast

characteristic: organism part

text: Homo sapiens

text: female

characteristic: sex

text: Sample 1


E-MTAB-11379:Sample 7

status: PUBLIC

tag: attribute

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11379:Sample 7

tag: Namespace:Director of Advanced Centre for Treatment, Research and Education in Cancer,  Professor of Medical Oncology, Tata Memorial Centre/Hospital & Homi Bhabha National Institute

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: human

characteristic: common name

characteristic: description

text: triple negative breast cancer

characteristic: disease

text: 1st progression

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: breast

text: Homo sapiens

text: female

text: Sample 7

characteristic: title


E-MTAB-11379:Sample 12

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Director of Advanced Centre for Treatment, Research and Education in Cancer, Professor of Medical Oncology, Tata Memorial Centre/Hospital & Homi Bhabha National Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11379:Sample 12

text: ArrayExpress

text: human

text: triple negative breast cancer

text: 1st progression

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female

text: Sample 12


E-MTAB-11379:Sample 2

text: public

text: E-MTAB-11379:Sample 2

text: ArrayExpress

text: human

text: triple negative breast cancer

text: 2nd progression

characteristic: disease staging

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: breast

characteristic: organism part

text: Homo sapiens

text: female

characteristic: sex

text: Sample 2


E-MTAB-11379:Sample 8

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11379:Sample 8

text: ArrayExpress

text: human

text: triple negative breast cancer

text: 2nd progression

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female

text: Sample 8


E-MTAB-11379:Sample 13

text: public

characteristic: SRA accession

text: E-MTAB-11379:Sample 13

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: human

characteristic: common name

text: triple negative breast cancer

text: 2nd progression

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female

text: Sample 13


E-MTAB-11379:Sample 3

text: public

text: E-MTAB-11379:Sample 3

text: ArrayExpress

text: human

characteristic: description

text: triple negative breast cancer

characteristic: disease

text: 3rd progression

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: breast

text: Homo sapiens

text: female

text: Sample 3

characteristic: title


E-MTAB-11379:Sample 14

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11379:Sample 14

text: ArrayExpress

text: human

text: triple negative breast cancer

text: 3rd progression

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female

text: Sample 14


E-MTAB-11379:Sample 4

text: public

text: E-MTAB-11379:Sample 4

text: ArrayExpress

text: human

text: triple negative breast cancer

text: blood

characteristic: disease staging

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: female

characteristic: sex

text: Sample 4


E-MTAB-11379:Sample 9

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11379:Sample 9

text: ArrayExpress

text: human

text: triple negative breast cancer

text: blood

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 9


E-MTAB-11379:Sample 15

text: public

characteristic: SRA accession

text: E-MTAB-11379:Sample 15

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: human

characteristic: common name

text: triple negative breast cancer

text: blood

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: Sample 15


E-MTAB-11379:Sample 5

text: public

text: E-MTAB-11379:Sample 5

text: ArrayExpress

text: human

characteristic: description

text: triple negative breast cancer

characteristic: disease

text: primary biopsy

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: breast

text: Homo sapiens

text: female

text: Sample 5

characteristic: title


E-MTAB-11379:Sample 10

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11379:Sample 10

text: ArrayExpress

text: human

text: triple negative breast cancer

text: primary biopsy

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female

text: Sample 10


E-MTAB-11379:Sample 16

text: public

text: E-MTAB-11379:Sample 16

text: ArrayExpress

text: human

text: triple negative breast cancer

text: primary biopsy

characteristic: disease staging

characteristic: individual

text: Homo sapiens

text: Homo sapiens

text: breast

characteristic: organism part

text: Homo sapiens

text: female

characteristic: sex

text: Sample 16


E-MTAB-11379:Sample 6

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11379:Sample 6

text: ArrayExpress

text: human

text: triple negative breast cancer

text: surgery

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female

text: Sample 6


E-MTAB-11379:Sample 11

text: public

characteristic: SRA accession

text: E-MTAB-11379:Sample 11

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: human

characteristic: common name

text: triple negative breast cancer

text: surgery

text: Homo sapiens

text: Homo sapiens

text: breast

text: Homo sapiens

text: female

text: Sample 11


text: public

tag: Namespace:Institute of Molecular Genetics of the Czech Academy of Sciences

text: 25 weeks

unit: week

characteristic: age

text: ArrayExpress

text: epithelial cell of small intestine

text: house mouse

text: Protocols: Adult Rosa26-tdTomato Apc-flox/flox Lgr5-CreERT2 mice were intraorally administered with 1 mg tamoxifen (in EtOH/mineral oil) and sacrificed by cervical dislocation after 6 weeks. The small intestinal epithelium contained tumors with endogenous expression of the red fluorescent protein tdTomato. A single cell suspension was prepared from whole ileum using dispase digestion. Cells were stained with the following antibodies: Hoechst33358, anti-CD45-PacificBlue, anti-EpCAM-FITC, anti-Trop2-APC. Using fluorescent activated cell sorting (FACS), we isolated live epithelial cells (Hoechst/CD45-/EpCAM+) and classified them into three groups: tdTomato-negative cells (mostly differentiated cells), Trop2+ tdTomato+ cells and Trop2- tdTomato+ cells. Total RNA was isolated using RNeasy Micro Kit (Qiagen) as described in the manufacturer’s protocol. The sequencing libraries were prepared using SMARTer Stranded Total RNA-seq Kit v2 Pico Input Mammalian following the manufacturer’s instructions.

characteristic: description

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: Hoechst-positive; CD45-negative; EpCAM-positive; tdTomato-negative

characteristic: fraction

characteristic: genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: ileum

text: wild type

characteristic: phenotype

text: Mus musculus

text: female

characteristic: strain

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute of Molecular Genetics of the Czech Academy of Sciences

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 25 weeks

text: ArrayExpress

text: epithelial cell of small intestine

text: house mouse

text: adult

text: colorectal carcinoma

text: Hoechst-positive; CD45-negative; EpCAM-positive; Trop2-positive tdTomato-positive

text: Rosa26-tdTomato Apc-flox/flox Lgr5-CreERT2

text: Mus musculus

text: Mus musculus

text: ileum

characteristic: organism part

text: tamoxifen-mediated Apc conditional homozygous knockout

text: Mus musculus

text: female

characteristic: sex


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 25 weeks

characteristic: age

text: ArrayExpress

characteristic: broker name

text: epithelial cell of small intestine

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: colorectal carcinoma

text: Hoechst-positive; CD45-negative; EpCAM-positive; Trop2-negative tdTomato-positive

text: Mus musculus

text: Mus musculus

text: ileum

text: Mus musculus

text: female


text: public

text: 26 weeks

text: ArrayExpress

text: epithelial cell of small intestine

text: house mouse

text: adult

characteristic: developmental stage

text: colorectal carcinoma

characteristic: disease

characteristic: fraction

characteristic: genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: ileum

characteristic: phenotype

text: Mus musculus

text: female

characteristic: strain

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 26 weeks

text: ArrayExpress

text: epithelial cell of small intestine

text: house mouse

text: adult

text: normal

text: Mus musculus

text: Mus musculus

text: ileum

characteristic: organism part

text: wild type

text: Mus musculus

text: female

characteristic: sex


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 26 weeks

characteristic: age

text: ArrayExpress

characteristic: broker name

text: epithelial cell of small intestine

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: colorectal carcinoma

text: Mus musculus

text: Mus musculus

text: ileum

text: Mus musculus

text: female


Mouse

text: Gachon University

text: public

text: Mouse

tag: Namespace:Gachon University

text: house mouse

text: The purpose of this study is to investigate changes in gut microbiota composition during the onset of diarrhea-dominant IBS by fructose malabsorption. We compared the microbiome profile in the feces collected from the cecum of WT and Chrebp-KO mice fed a control diet or a high-fructose diet.

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Intestinal microbiota profile of IBS-D mouse model induced by fructose malabsorption

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CEBAS-CSIC

text: public

characteristic: collection date

text: Soil sample

characteristic: environment (biome)

characteristic: environment (feature)

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: project name

text: soil metagenome

text: Sanger

characteristic: sequencing method

text: soil

characteristic: soil environmental package


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TUFTS UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:TUFTS UNIVERSITY

characteristic: Submitter Id

text: feces ERC000011

characteristic: bio_material checklist_accession

text: alpaca

characteristic: common name

characteristic: description

text: USA

characteristic: geographic location (region and locality)

text: Vicugna pacos

characteristic: organism

text: Vicugna pacos


AIVN 13 (TZ:MVRT7-5:2019)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: AIVN 13 (TZ:MVRT7-5:2019)

tag: Namespace:Mikocheni Agricultural Research Institute

text: Tanzania Agricultural Research institute(TARI-Mikocheni)

text: Hilda Bachwenkizi

characteristic: collector name

text: Diseased sweet potato leaf samples

text: Tanzania

characteristic: geographic location (country and/or sea)

text: DD

characteristic: geographic location (latitude)

text: DD

characteristic: geographic location (longitude)

text: Eastern zone

text: 3 months

characteristic: host age

text: dicotyledonous perennial plant that produces edible tubers

characteristic: host behaviour

text: Sweet potato

characteristic: host common name

text: Leaf curl

characteristic: host disease outcome

text: Land

characteristic: host habitat

text: Ipomoea�batatas�(L.) Lam

characteristic: host scientific name

characteristic: host subject id

characteristic: isolate

text: Sweet potato

characteristic: isolation source host-associated

text: Ipomoea setosa ERC000033

characteristic: isolation source non-host-associated checklist_accession

text: Sweet potato leaf curl Sao Paulo virus

characteristic: receipt date

text: Diseased

characteristic: sample capture status

text: Sweet potato leaf curl Sao Paulo virus

text: Sweet potato leaf samples

characteristic: title

text: Hilda Bachwenkizi

characteristic: virus identifier


AIVN 11 (TZ:ARUPT:2019)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Mikocheni Agricultural Research Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: AIVN 11 (TZ:ARUPT:2019)

characteristic: Submitter Id

characteristic: Tanzania Agricultural Research institute(TARI-Mikocheni)

text: Hilda Bachwenkizi

characteristic: collector name

text: Diseased sweet potato leaf samples

characteristic: description

text: Tanzania

characteristic: geographic location (country and/or sea)

text: Northern zone

characteristic: geographic location (region and locality)

text: 3 months

text: Sweet potato

text: Leaf curl

text: Land

text: Ipomoea�batatas�(L.) Lam

text: Sweet potato

text: Ipomoea setosa ERC000033

text: Sweet potato leaf curl Sao Paulo virus

characteristic: organism

text: Diseased

text: Sweet potato leaf curl Sao Paulo virus

text: Sweet potato leaf samples

text: Hilda Bachwenkizi


AIVN 10 (TZ:MVRPT:2019)

text: public

text: AIVN 10 (TZ:MVRPT:2019)

text: Hilda Bachwenkizi

text: Diseased sweet potato leaf samples

text: Tanzania

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Eastern zone

text: 3 months

characteristic: host age

characteristic: host behaviour

text: Sweet potato

characteristic: host common name

text: Leaf curl

characteristic: host disease outcome

text: Land

characteristic: host habitat

text: Ipomoea�batatas�(L.) Lam

characteristic: host scientific name

characteristic: host subject id

characteristic: isolate

text: Sweet potato

characteristic: isolation source host-associated

text: Ipomoea setosa ERC000033

characteristic: isolation source non-host-associated checklist_accession

text: Sweet potato leaf curl Sao Paulo virus

characteristic: receipt date

text: Diseased

characteristic: sample capture status

text: Sweet potato leaf curl Sao Paulo virus

text: Sweet potato leaf samples

characteristic: title

text: Hilda Bachwenkizi

characteristic: virus identifier


name: TZ:SHZPU:2019(AIVN 12)

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: TZ:SHZPU:2019(AIVN 12)

characteristic: Submitter Id

characteristic: Tanzania Agricultural Research institute(TARI-Mikocheni)

text: Hilda Bachwenkizi

characteristic: collector name

text: Diseased sweet potato leaf samples

characteristic: description

text: Tanzania

characteristic: geographic location (country and/or sea)

text: Southern Highland zone

characteristic: geographic location (region and locality)

text: 3 months

text: Sweet potato

text: Leaf curl

text: Land

text: Ipomoea�batatas�(L.) Lam

text: Sweet potato

text: Ipomoea setosa ERC000033

text: Sweet potato leaf curl Uganda virus-[Uganda:Kampala:2008]

characteristic: organism

text: Diseased

text: Sweet potato leaf samples

text: Hilda Bachwenkizi


AIVN 8(TZ:CHALU2-4:2018)

text: public

text: AIVN 8(TZ:CHALU2-4:2018)

text: Hilda Bachwenkizi

text: Diseased sweet potato leaf samples

text: Tanzania

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Eastern zone

text: 3 months

characteristic: host age

characteristic: host behaviour

text: Sweet potato

characteristic: host common name

text: Leaf curl

characteristic: host disease outcome

text: Land

characteristic: host habitat

text: Ipomoea�batatas�(L.) Lam

characteristic: host scientific name

characteristic: isolate

text: Sweet potato

characteristic: isolation source host-associated

text: Ipomoea setosa ERC000033

characteristic: isolation source non-host-associated checklist_accession

characteristic: receipt date

text: Diseased

characteristic: sample capture status

text: Sweet potato leaf samples

characteristic: title

text: Hilda Bachwenkizi

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Western Ontario

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-08-02-2022-05:20:44:763-133138

tag: Namespace:University of Western Ontario

characteristic: Submitter Id

text: Suncor

text: Spent granulated activated carbon

characteristic: description

text: Yes

text: Canada

characteristic: geographic location (country and/or sea)

text: Ontario, Sarnia

characteristic: geographic location (region and locality)

text: Carbon bed filter

text: activated carbon metagenome

text: activated carbon metagenome


text: Tallinn University of Technology

text: public

tag: Namespace:Tallinn University of Technology

text: somatic cells from pre-ovulatory follicle

text: human

characteristic: common name

text: normoresponder

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: female ERC000011

characteristic: sex checklist_accession

text: ovary


text: Tallinn University of Technology

text: public

text: human

text: hyporesponder

text: Homo sapiens

text: Homo sapiens

text: female ERC000011

text: ovary

characteristic: title


characteristic: ENA-CHECKLIST

text: Station Biologique de Roscoff

text: public

tag: Namespace:Station Biologique de Roscoff

characteristic: biological replicate

characteristic: collection date

text: This sample DNA1_S2_bloom1 corresponds to the biological replicate 1 of 'inside bloom DCM' treatment and was collected on the date :2019-06-12, 10 days after the start of the experiment. In the treatment 'inside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

text: DCM - deep chlorophyll maximum depth; SRF - surface

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

text: microalgal culturing environment (ENVO:01000312)

characteristic: environment (material)

text: inside bloom DCM

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

characteristic: sequencing method

text: V4-V5 region of 16s rRNA gene

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

characteristic: description

text: This sample DNA1_S2_bloom2 corresponds to the biological replicate 2 of 'inside bloom DCM' treatment and was collected on the date :2019-06-12, 10 days after the start of the experiment. In the treatment 'inside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: inside bloom DCM

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: title


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA1_S2_bloom3 corresponds to the biological replicate 3 of 'inside bloom DCM' treatment and was collected on the date :2019-06-12, 10 days after the start of the experiment. In the treatment 'inside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: inside bloom DCM

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

characteristic: sequencing method

text: V4-V5 region of 16s rRNA gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

text: This sample DNA1_S2_surface1 corresponds to the biological replicate 1 of 'inside bloom SRF' treatment and was collected on the date :2019-06-12, 10 days after the start of the experiment. In the treatment 'inside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the surface (SRF) depth.

characteristic: description

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: inside bloom SRF

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: target gene


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA1_S2_surface3 corresponds to the biological replicate 3 of 'inside bloom SRF' treatment and was collected on the date :2019-06-12, 10 days after the start of the experiment. In the treatment 'inside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the surface (SRF) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: inside bloom SRF

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

characteristic: description

text: This sample DNA1_S3_bloom1 corresponds to the biological replicate 1 of 'outside bloom DCM' treatment and was collected on the date :2019-06-12, 10 days after the start of the experiment. In the treatment 'outside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: outside bloom DCM

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

characteristic: sequencing method

text: V4-V5 region of 16s rRNA gene


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA1_S3_bloom2 corresponds to the biological replicate 2 of 'outside bloom DCM' treatment and was collected on the date :2019-06-12, 10 days after the start of the experiment. In the treatment 'outside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: outside bloom DCM

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

text: This sample DNA1_S3_bloom3 corresponds to the biological replicate 3 of 'outside bloom DCM' treatment and was collected on the date :2019-06-12, 10 days after the start of the experiment. In the treatment 'outside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

characteristic: description

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: outside bloom DCM

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: title


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA1_S3_surface1 corresponds to the biological replicate 1 of 'outside bloom SRF' treatment and was collected on the date :2019-06-12, 10 days after the start of the experiment. In the treatment 'outside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the surface (SRF) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: outside bloom SRF

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

characteristic: sequencing method

text: V4-V5 region of 16s rRNA gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

characteristic: description

text: This sample DNA1_S3_surface2 corresponds to the biological replicate 2 of 'outside bloom SRF' treatment and was collected on the date :2019-06-12, 10 days after the start of the experiment. In the treatment 'outside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the surface (SRF) depth.

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: outside bloom SRF

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: target gene


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA1_S3_surface3 corresponds to the biological replicate 3 of 'outside bloom SRF' treatment and was collected on the date :2019-06-12, 10 days after the start of the experiment. In the treatment 'outside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the surface (SRF) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: outside bloom SRF

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

characteristic: description

text: This sample DNA2_S2_bloom1 corresponds to the biological replicate 1 of 'inside bloom DCM' treatment and was collected on the date :2019-06-24, 22 days after the start of the experiment. In the treatment 'inside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: inside bloom DCM

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

characteristic: sequencing method

text: V4-V5 region of 16s rRNA gene


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA2_S2_bloom2 corresponds to the biological replicate 2 of 'inside bloom DCM' treatment and was collected on the date :2019-06-24, 22 days after the start of the experiment. In the treatment 'inside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: inside bloom DCM

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

characteristic: description

text: This sample DNA2_S2_bloom3 corresponds to the biological replicate 3 of 'inside bloom DCM' treatment and was collected on the date :2019-06-24, 22 days after the start of the experiment. In the treatment 'inside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: inside bloom DCM

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: title


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA2_S2_surface1 corresponds to the biological replicate 1 of 'inside bloom SRF' treatment and was collected on the date :2019-06-24, 22 days after the start of the experiment. In the treatment 'inside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the surface (SRF) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: inside bloom SRF

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

characteristic: sequencing method

text: V4-V5 region of 16s rRNA gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

characteristic: description

text: This sample DNA2_S2_surface3 corresponds to the biological replicate 3 of 'inside bloom SRF' treatment and was collected on the date :2019-06-24, 22 days after the start of the experiment. In the treatment 'inside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the surface (SRF) depth.

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: inside bloom SRF

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: target gene


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: DCM - deep chlorophyll maximum depth; SRF - surface

text: This sample DNA2_S3_bloom3 corresponds to the biological replicate 3 of 'outside bloom DCM' treatment and was collected on the date :2019-06-24, 22 days after the start of the experiment. In the treatment 'outside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: outside bloom DCM

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

characteristic: description

text: This sample DNA2_S3_surface1 corresponds to the biological replicate 1 of 'outside bloom SRF' treatment and was collected on the date :2019-06-24, 22 days after the start of the experiment. In the treatment 'outside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the surface (SRF) depth.

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: microalgal culturing environment (ENVO:01000312)

text: outside bloom SRF

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

characteristic: sequencing method

text: V4-V5 region of 16s rRNA gene


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA2_S3_surface2 corresponds to the biological replicate 2 of 'outside bloom SRF' treatment and was collected on the date :2019-06-24, 22 days after the start of the experiment. In the treatment 'outside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the surface (SRF) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: outside bloom SRF

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

characteristic: description

text: This sample DNA2_S3_surface3 corresponds to the biological replicate 3 of 'outside bloom SRF' treatment and was collected on the date :2019-06-24, 22 days after the start of the experiment. In the treatment 'outside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the surface (SRF) depth.

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: outside bloom SRF

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: title


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA3_1212_S2_bloom1 corresponds to the biological replicate 1 of 'inside bloom DCM' treatment and was collected on the date :2019-07-05, 33 days after the start of the experiment. In the treatment 'inside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: inside bloom DCM

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

characteristic: sequencing method

text: V4-V5 region of 16s rRNA gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

characteristic: description

text: This sample DNA3_1212_S2_bloom2 corresponds to the biological replicate 2 of 'inside bloom DCM' treatment and was collected on the date :2019-07-05, 33 days after the start of the experiment. In the treatment 'inside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: inside bloom DCM

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: target gene


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA3_1212_S2_bloom3 corresponds to the biological replicate 3 of 'inside bloom DCM' treatment and was collected on the date :2019-07-05, 33 days after the start of the experiment. In the treatment 'inside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: inside bloom DCM

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

text: This sample DNA3_1212_S2_surface1 corresponds to the biological replicate 1 of 'inside bloom SRF' treatment and was collected on the date :2019-07-05, 33 days after the start of the experiment. In the treatment 'inside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the surface (SRF) depth.

characteristic: description

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: inside bloom SRF

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

characteristic: sequencing method

text: V4-V5 region of 16s rRNA gene


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA3_1212_S2_surface2 corresponds to the biological replicate 2 of 'inside bloom SRF' treatment and was collected on the date :2019-07-05, 33 days after the start of the experiment. In the treatment 'inside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the surface (SRF) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: inside bloom SRF

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

text: This sample DNA3_1212_S2_surface3 corresponds to the biological replicate 3 of 'inside bloom SRF' treatment and was collected on the date :2019-07-05, 33 days after the start of the experiment. In the treatment 'inside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the surface (SRF) depth.

characteristic: description

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: inside bloom SRF

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: title


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA3_1212_S3_bloom1 corresponds to the biological replicate 1 of 'outside bloom DCM' treatment and was collected on the date :2019-07-05, 33 days after the start of the experiment. In the treatment 'outside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: outside bloom DCM

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

characteristic: sequencing method

text: V4-V5 region of 16s rRNA gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

characteristic: description

text: This sample DNA3_1212_S3_bloom2 corresponds to the biological replicate 2 of 'outside bloom DCM' treatment and was collected on the date :2019-07-05, 33 days after the start of the experiment. In the treatment 'outside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: outside bloom DCM

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: target gene


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA3_1212_S3_surface1 corresponds to the biological replicate 1 of 'outside bloom SRF' treatment and was collected on the date :2019-07-05, 33 days after the start of the experiment. In the treatment 'outside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the surface (SRF) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: outside bloom SRF

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

characteristic: description

text: This sample DNA3_1212_S3_surface2 corresponds to the biological replicate 2 of 'outside bloom SRF' treatment and was collected on the date :2019-07-05, 33 days after the start of the experiment. In the treatment 'outside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the surface (SRF) depth.

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: outside bloom SRF

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

characteristic: sequencing method

text: V4-V5 region of 16s rRNA gene


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA3_1212_S3_surface3 corresponds to the biological replicate 3 of 'outside bloom SRF' treatment and was collected on the date :2019-07-05, 33 days after the start of the experiment. In the treatment 'outside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the surface (SRF) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: outside bloom SRF

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

text: This sample DNA4_1212_S2_bloom2 corresponds to the biological replicate 2 of 'inside bloom DCM' treatment and was collected on the date :2019-07-19, 47 days after the start of the experiment. In the treatment 'inside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

characteristic: description

text: DCM - deep chlorophyll maximum depth; SRF - surface

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: inside bloom DCM

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: title


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA4_1212_S2_bloom3 corresponds to the biological replicate 3 of 'inside bloom DCM' treatment and was collected on the date :2019-07-19, 47 days after the start of the experiment. In the treatment 'inside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: inside bloom DCM

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

characteristic: sequencing method

text: V4-V5 region of 16s rRNA gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

text: This sample DNA4_1212_S2_surface1 corresponds to the biological replicate 1 of 'inside bloom SRF' treatment and was collected on the date :2019-07-19, 47 days after the start of the experiment. In the treatment 'inside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the surface (SRF) depth.

characteristic: description

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: microalgal culturing environment (ENVO:01000312)

text: inside bloom SRF

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: target gene


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA4_1212_S2_surface2 corresponds to the biological replicate 2 of 'inside bloom SRF' treatment and was collected on the date :2019-07-19, 47 days after the start of the experiment. In the treatment 'inside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the surface (SRF) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: inside bloom SRF

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

characteristic: description

text: This sample DNA4_1212_S2_surface3 corresponds to the biological replicate 3 of 'inside bloom SRF' treatment and was collected on the date :2019-07-19, 47 days after the start of the experiment. In the treatment 'inside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the surface (SRF) depth.

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: inside bloom SRF

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

characteristic: sequencing method

text: V4-V5 region of 16s rRNA gene


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA4_1212_S3_bloom1 corresponds to the biological replicate 1 of 'outside bloom DCM' treatment and was collected on the date :2019-07-19, 47 days after the start of the experiment. In the treatment 'outside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: outside bloom DCM

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

characteristic: description

text: This sample DNA4_1212_S3_bloom3 corresponds to the biological replicate 3 of 'outside bloom DCM' treatment and was collected on the date :2019-07-19, 47 days after the start of the experiment. In the treatment 'outside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: outside bloom DCM

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: title


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA4_1212_S3_surface2 corresponds to the biological replicate 2 of 'outside bloom SRF' treatment and was collected on the date :2019-07-19, 47 days after the start of the experiment. In the treatment 'outside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the surface (SRF) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: outside bloom SRF

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

characteristic: sequencing method

text: V4-V5 region of 16s rRNA gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

characteristic: description

text: This sample DNA4_1212_S3_surface3 corresponds to the biological replicate 3 of 'outside bloom SRF' treatment and was collected on the date :2019-07-19, 47 days after the start of the experiment. In the treatment 'outside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the surface (SRF) depth.

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: outside bloom SRF

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: target gene


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA5_1212_S2_bloom1 corresponds to the biological replicate 1 of 'inside bloom DCM' treatment and was collected on the date :2019-07-31, 59 days after the start of the experiment. In the treatment 'inside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: inside bloom DCM

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

text: This sample DNA5_1212_S2_bloom2 corresponds to the biological replicate 2 of 'inside bloom DCM' treatment and was collected on the date :2019-07-31, 59 days after the start of the experiment. In the treatment 'inside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

characteristic: description

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: inside bloom DCM

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

characteristic: sequencing method

text: V4-V5 region of 16s rRNA gene


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA5_1212_S2_bloom3 corresponds to the biological replicate 3 of 'inside bloom DCM' treatment and was collected on the date :2019-07-31, 59 days after the start of the experiment. In the treatment 'inside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: inside bloom DCM

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

characteristic: description

text: This sample DNA5_1212_S2_surface1 corresponds to the biological replicate 1 of 'inside bloom SRF' treatment and was collected on the date :2019-07-31, 59 days after the start of the experiment. In the treatment 'inside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the surface (SRF) depth.

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: inside bloom SRF

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: title


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA5_1212_S2_surface2 corresponds to the biological replicate 2 of 'inside bloom SRF' treatment and was collected on the date :2019-07-31, 59 days after the start of the experiment. In the treatment 'inside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the surface (SRF) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: inside bloom SRF

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

characteristic: sequencing method

text: V4-V5 region of 16s rRNA gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

characteristic: description

text: This sample DNA5_1212_S2_surface3 corresponds to the biological replicate 3 of 'inside bloom SRF' treatment and was collected on the date :2019-07-31, 59 days after the start of the experiment. In the treatment 'inside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the surface (SRF) depth.

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: inside bloom SRF

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: target gene


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA5_1212_S3_bloom1 corresponds to the biological replicate 1 of 'outside bloom DCM' treatment and was collected on the date :2019-07-31, 59 days after the start of the experiment. In the treatment 'outside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: outside bloom DCM

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

text: DCM - deep chlorophyll maximum depth; SRF - surface

characteristic: description

text: This sample DNA5_1212_S3_bloom2 corresponds to the biological replicate 2 of 'outside bloom DCM' treatment and was collected on the date :2019-07-31, 59 days after the start of the experiment. In the treatment 'outside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: outside bloom DCM

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

characteristic: sequencing method

text: V4-V5 region of 16s rRNA gene


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA5_1212_S3_bloom3 corresponds to the biological replicate 3 of 'outside bloom DCM' treatment and was collected on the date :2019-07-31, 59 days after the start of the experiment. In the treatment 'outside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: outside bloom DCM

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

text: This sample DNA5_1212_S3_surface1 corresponds to the biological replicate 1 of 'outside bloom SRF' treatment and was collected on the date :2019-07-31, 59 days after the start of the experiment. In the treatment 'outside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the surface (SRF) depth.

characteristic: description

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: microalgal culturing environment (ENVO:01000312)

text: outside bloom SRF

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: title


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA5_1212_S3_surface2 corresponds to the biological replicate 2 of 'outside bloom SRF' treatment and was collected on the date :2019-07-31, 59 days after the start of the experiment. In the treatment 'outside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the surface (SRF) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: outside bloom SRF

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

characteristic: sequencing method

text: V4-V5 region of 16s rRNA gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

characteristic: description

text: This sample DNA5_1212_S3_surface3 corresponds to the biological replicate 3 of 'outside bloom SRF' treatment and was collected on the date :2019-07-31, 59 days after the start of the experiment. In the treatment 'outside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the surface (SRF) depth.

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: outside bloom SRF

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: target gene


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA6_1212_S2_bloom1 corresponds to the biological replicate 1 of 'inside bloom DCM' treatment and was collected on the date :2019-08-12, 71 days after the start of the experiment. In the treatment 'inside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: inside bloom DCM

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

characteristic: description

text: This sample DNA6_1212_S2_bloom2 corresponds to the biological replicate 2 of 'inside bloom DCM' treatment and was collected on the date :2019-08-12, 71 days after the start of the experiment. In the treatment 'inside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: inside bloom DCM

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

characteristic: sequencing method

text: V4-V5 region of 16s rRNA gene


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA6_1212_S2_bloom3 corresponds to the biological replicate 3 of 'inside bloom DCM' treatment and was collected on the date :2019-08-12, 71 days after the start of the experiment. In the treatment 'inside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: inside bloom DCM

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: target gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

characteristic: description

text: This sample DNA6_1212_S2_surface1 corresponds to the biological replicate 1 of 'inside bloom SRF' treatment and was collected on the date :2019-08-12, 71 days after the start of the experiment. In the treatment 'inside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the surface (SRF) depth.

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: inside bloom SRF

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: title


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA6_1212_S2_surface2 corresponds to the biological replicate 2 of 'inside bloom SRF' treatment and was collected on the date :2019-08-12, 71 days after the start of the experiment. In the treatment 'inside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the surface (SRF) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: inside bloom SRF

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

characteristic: sequencing method

text: V4-V5 region of 16s rRNA gene


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Station Biologique de Roscoff

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biological replicate

text: This sample DNA6_1212_S2_surface3 corresponds to the biological replicate 3 of 'inside bloom SRF' treatment and was collected on the date :2019-08-12, 71 days after the start of the experiment. In the treatment 'inside bloom SRF' axenic E. huxleyi RCC1212 was inoculated with bacteria collected inside the E. huxleyi bloom at the surface (SRF) depth.

characteristic: description

text: marine biome (ENVO:00000447)

text: saline water (ENVO:00002010)

text: inside bloom SRF

text: France

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Emiliania huxleyi

text: axenic RCC1212

text: host-associated

text: marine metagenome

characteristic: organism

text: 515fY- 926r (Parada et al., 2016)

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: target gene


text: Station Biologique de Roscoff

text: public

characteristic: collection date

text: This sample DNA6_1212_S3_bloom1 corresponds to the biological replicate 1 of 'outside bloom DCM' treatment and was collected on the date :2019-08-12, 71 days after the start of the experiment. In the treatment 'outside bloom DCM' axenic E. huxleyi RCC1212 was inoculated with bacteria collected outside the E. huxleyi bloom at the deep chlorophyll maximum (DCM) depth.

characteristic: elapsed time (days)

text: marine biome (ENVO:00000447)

characteristic: environment (biome)

text: saline water (ENVO:00002010)

characteristic: environment (feature)

characteristic: environment (material)

text: outside bloom DCM

characteristic: experiment treatment

text: France

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: Emiliania huxleyi

characteristic: host

text: axenic RCC1212

characteristic: host subject id

text: host-associated

characteristic: host-associated environmental package

characteristic: investigation type

text: marine metagenome

text: 515fY- 926r (Parada et al., 2016)

characteristic: pcr primers

characteristic: project name

text: marine metagenome

text: Illumina Miseq

text: V4-V5 region of 16s rRNA gene

characteristic: title