characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-196: Bacteria; Bacteroidetes

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Bacteroidetes bacterium

characteristic: project name

text: Bacteroidetes bacterium

text: multi-marker approach

characteristic: title


status: PUBLIC

tag: attribute

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-197: Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas; Sphingomonas melonis

characteristic: description

text: freshwater lake biome

text: Czech Republic

unit: DD

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Sphingomonas melonis

characteristic: organism

characteristic: sample derived from

text: Sphingomonas melonis

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-2: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Alcaligenaceae bacterium

characteristic: project name

text: Alcaligenaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-20: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Burkholderiaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Burkholderiaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-205: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae; Sediminibacterium

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Chitinophagaceae bacterium

characteristic: project name

text: Chitinophagaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-206: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Alcaligenaceae bacterium

characteristic: organism

text: Alcaligenaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-207: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-208: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Flavobacteriaceae bacterium

characteristic: organism

text: Flavobacteriaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-21: Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Caulobacteraceae bacterium

characteristic: project name

text: Caulobacteraceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-211: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Comamonadaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-212: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-213: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Beijerinckiaceae bacterium

characteristic: organism

text: Beijerinckiaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-22: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Alcaligenaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Alcaligenaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-27: Bacteria; Verrucomicrobia; Opitutae

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Opitutae bacterium

characteristic: organism

text: Opitutae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-32: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Flavobacteriaceae bacterium

characteristic: project name

text: Flavobacteriaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-34: Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Sphingomonadaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Sphingomonadaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-36: Bacteria; Actinobacteria; Actinobacteria

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Actinobacteria bacterium

characteristic: project name

text: Actinobacteria bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

text: Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-37: Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Phenylobacterium aquaticum

characteristic: organism

text: Phenylobacterium aquaticum

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-4: Bacteria; Bacteroidetes

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Bacteroidetes bacterium

characteristic: project name

characteristic: sample derived from

text: Bacteroidetes bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-45: Bacteria; Actinobacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Rhodoluna

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Microbacteriaceae bacterium

characteristic: organism

text: Microbacteriaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-47: Bacteria; Verrucomicrobia; Opitutae

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Opitutae bacterium

characteristic: project name

text: Opitutae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-48: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae; Sediminibacterium

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Chitinophagaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Chitinophagaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-50: Bacteria; Actinobacteria; Actinobacteria

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Actinobacteria bacterium

characteristic: project name

text: Actinobacteria bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-54: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Burkholderiaceae bacterium

characteristic: organism

text: Burkholderiaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-57: Bacteria; Actinobacteria; Actinobacteria

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Actinobacteria bacterium

characteristic: project name

characteristic: sample derived from

text: Actinobacteria bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-58: Bacteria; Verrucomicrobia; Opitutae

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Opitutae bacterium

characteristic: organism

text: Opitutae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-59: Bacteria; Actinobacteria; Actinobacteria

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Actinobacteria bacterium

characteristic: project name

text: Actinobacteria bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-62: Bacteria; Actinobacteria; Actinobacteria

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Actinobacteria bacterium

characteristic: organism

characteristic: sample derived from

text: Actinobacteria bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-63: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae; Flavipsychrobacter

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Flavipsychrobacter stenotrophus

characteristic: project name

text: Flavipsychrobacter stenotrophus

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-65: Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Sphingomonadaceae bacterium

characteristic: organism

text: Sphingomonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-66: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-69: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Comamonadaceae bacterium

characteristic: organism

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-70: Bacteria; Verrucomicrobia; Opitutae

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Opitutae bacterium

characteristic: project name

text: Opitutae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-71: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Flavobacteriales bacterium

characteristic: organism

characteristic: sample derived from

text: Flavobacteriales bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-73: Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Methylophilaceae; Candidatus Methylopumilus

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Methylophilaceae bacterium

characteristic: project name

text: Methylophilaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-74: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiales genera incertae sedis; Paucibacter

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Burkholderiales bacterium

characteristic: organism

text: Burkholderiales bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-76: Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Methylophilaceae; Candidatus Methylopumilus

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Methylophilaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Methylophilaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-77: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Flavobacteriales bacterium

characteristic: organism

text: Flavobacteriales bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-80: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Oxalobacteraceae bacterium

characteristic: project name

text: Oxalobacteraceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-81: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Chitinophagaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Chitinophagaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-83: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Beijerinckiaceae bacterium

characteristic: project name

text: Beijerinckiaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-84: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Comamonadaceae bacterium

characteristic: organism

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-87: Bacteria; Proteobacteria; Betaproteobacteria

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Betaproteobacteria bacterium

characteristic: project name

characteristic: sample derived from

text: Betaproteobacteria bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-9: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Comamonadaceae bacterium

characteristic: organism

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-90: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Burkholderiaceae bacterium

characteristic: project name

text: Burkholderiaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-91: Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Acidimicrobiaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Acidimicrobiaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-93: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Burkholderiales bacterium

characteristic: project name

text: Burkholderiales bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

text: Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-94: Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Methylococcales bacterium

characteristic: organism

text: Methylococcales bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-96: Bacteria; Actinobacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Rhodoluna

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Microbacteriaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Microbacteriaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-97: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Burkholderiales bacterium

characteristic: organism

text: Burkholderiales bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-DAM-100519-98: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: freshwater lake biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake water

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Burkholderiales bacterium

characteristic: project name

text: Burkholderiales bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-DAM-100519-99: Bacteria; Bacteroidetes

characteristic: description

text: freshwater lake biome

text: Czech Republic

text: lake water

text: freshwater lake biome

text: lake water metagenome

text: Bacteroidetes bacterium

characteristic: organism

characteristic: sample derived from

text: Bacteroidetes bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-IN-100519-20: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas

text: freshwater river biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: river water

text: freshwater river biome

characteristic: local environmental context

text: riverine metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-IN-100519-24: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

characteristic: description

text: freshwater river biome

text: Czech Republic

text: river water

text: freshwater river biome

text: riverine metagenome

text: Flavobacteriaceae bacterium

characteristic: organism

text: Flavobacteriaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-IN-100519-7: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax

text: freshwater river biome

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: river water

text: freshwater river biome

characteristic: local environmental context

text: riverine metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-A-240519-10: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiaceae bacterium

characteristic: organism

text: Burkholderiaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-A-240519-105: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-A-240519-106: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Alcaligenaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Alcaligenaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-A-240519-111: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiales genera incertae sedis; Aquabacterium

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiales bacterium

characteristic: project name

text: Burkholderiales bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-A-240519-117: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Flavobacteriaceae bacterium

characteristic: organism

text: Flavobacteriaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-A-240519-118: Bacteria; Proteobacteria; Oligoflexia; Bacteriovoracales; Bacteriovoracaceae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Bacteriovoracaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Bacteriovoracaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-A-240519-12: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiaceae bacterium

characteristic: organism

text: Burkholderiaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-A-240519-122: Bacteria; Candidatus Gracilibacteria

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Candidatus Gracilibacteria bacterium

characteristic: project name

text: Candidatus Gracilibacteria bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-A-240519-123: Bacteria; Proteobacteria; Betaproteobacteria

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Betaproteobacteria bacterium

characteristic: organism

characteristic: sample derived from

text: Betaproteobacteria bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-A-240519-124: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiaceae bacterium

characteristic: project name

text: Burkholderiaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-A-240519-125: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Flavobacteriaceae bacterium

characteristic: organism

text: Flavobacteriaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-A-240519-13: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiales bacterium

characteristic: project name

characteristic: sample derived from

text: Burkholderiales bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-A-240519-16: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-A-240519-23: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiales bacterium

characteristic: project name

text: Burkholderiales bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-A-240519-26: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-A-240519-28: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-A-240519-30: Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Cytophagaceae bacterium

characteristic: organism

text: Cytophagaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-A-240519-35: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-A-240519-37: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiales bacterium

characteristic: organism

text: Burkholderiales bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-A-240519-38: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-A-240519-39: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-A-240519-41: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Moraxellaceae bacterium

characteristic: project name

text: Moraxellaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

text: Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-A-240519-45: Bacteria; Verrucomicrobia; Opitutae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Opitutae bacterium

characteristic: organism

text: Opitutae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-A-240519-46: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-A-240519-47: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiales bacterium

characteristic: organism

text: Burkholderiales bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-A-240519-48: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiaceae bacterium

characteristic: project name

text: Burkholderiaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-A-240519-50: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Chitinophagaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Chitinophagaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-A-240519-52: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-A-240519-53: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-A-240519-54: Bacteria; Proteobacteria; Oligoflexia; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Bdellovibrionaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Bdellovibrionaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-A-240519-55: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Alcaligenaceae bacterium

characteristic: organism

text: Alcaligenaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-A-240519-57: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-A-240519-58: Bacteria; Proteobacteria; Oligoflexia; Bdellovibrionales; Bdellovibrionaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Bdellovibrionaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Bdellovibrionaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-A-240519-61: Bacteria; Proteobacteria; Alphaproteobacteria

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Alphaproteobacteria bacterium

characteristic: project name

text: Alphaproteobacteria bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-A-240519-62: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiaceae bacterium

characteristic: organism

text: Burkholderiaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-A-240519-63: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiales genera incertae sedis; Aquabacterium

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiales bacterium

characteristic: project name

characteristic: sample derived from

text: Burkholderiales bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-A-240519-66: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-A-240519-68: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Flavobacteriaceae bacterium

characteristic: project name

text: Flavobacteriaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-A-240519-7: Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobiaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Verrucomicrobiaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Verrucomicrobiaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-A-240519-75: Bacteria; Proteobacteria; Oligoflexia; Bdellovibrionales

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Bdellovibrionales bacterium

characteristic: project name

text: Bdellovibrionales bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-A-240519-77: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiales bacterium

characteristic: organism

text: Burkholderiales bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-A-240519-85: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiales bacterium

characteristic: project name

characteristic: sample derived from

text: Burkholderiales bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-A-240519-9: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Chitinophagaceae bacterium

characteristic: organism

text: Chitinophagaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-A-240519-91: Bacteria

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: bacterium

characteristic: project name

text: bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-A-240519-96: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-A-240519-99: Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Phenylobacterium aquaticum

characteristic: project name

text: Phenylobacterium aquaticum

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-B-240519-1: Bacteria; Proteobacteria; Oligoflexia; Bacteriovoracales; Bacteriovoracaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Bacteriovoracaceae bacterium

characteristic: organism

text: Bacteriovoracaceae bacterium

text: multi-marker approach

characteristic: title