characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: Gut content

characteristic: environmental medium

text: Spain

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: Lactobacillus johnsonii

characteristic: project name

text: Lactobacillus johnsonii

text: NextSeq 550

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus johnsonii

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094867_bin.3_metaWRAP_v1.3_MAG


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run ERR5094867 of study ERP126324.

characteristic: description

text: Gut content

text: Spain

text: not provided

unit: DD

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: Lactobacillus gallinarum

characteristic: organism

text: Shotgun metagenomics sequencing results for intestinal samples collected from rainbow trout farms in three European countries.

characteristic: sample derived from

text: Lactobacillus gallinarum

text: NextSeq 550

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus gallinarum

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094867_bin.7_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: Gut content

characteristic: environmental medium

text: Spain

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: [Pasteurella] aerogenes

characteristic: project name

text: [Pasteurella] aerogenes

text: NextSeq 550

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__;s__[Pasteurella] aerogenes

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094867_bin.8_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Gut content

text: Spain

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Clostridium sp.

characteristic: organism

characteristic: sample derived from

text: uncultured Clostridium sp.

text: NextSeq 550

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094867_bin.9_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run ERR5094868 of study ERP126324.

text: Gut content

characteristic: environmental medium

text: Spain

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: Lactobacillus johnsonii

characteristic: project name

text: Lactobacillus johnsonii

text: NextSeq 550

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094868_bin.1_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Gut content

text: Spain

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Lactobacillus sp.

characteristic: organism

characteristic: sample derived from

text: uncultured Lactobacillus sp.

text: NextSeq 550

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094868_bin.10_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: Gut content

characteristic: environmental medium

text: Spain

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: uncultured Nosocomiicoccus sp.

characteristic: project name

text: uncultured Nosocomiicoccus sp.

text: NextSeq 550

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Nosocomiicoccus;s__

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094868_bin.11_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Gut content

text: Spain

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Lactobacillus sp.

characteristic: organism

characteristic: sample derived from

text: uncultured Lactobacillus sp.

text: NextSeq 550

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus vaginalis

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094868_bin.13_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes v3.15.3

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: Gut content

characteristic: environmental medium

text: Spain

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: Lactobacillus crispatus

characteristic: project name

text: Lactobacillus crispatus

text: NextSeq 550

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus crispatus

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094868_bin.14_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Gut content

text: Spain

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Lactobacillus sp.

characteristic: organism

text: Shotgun metagenomics sequencing results for intestinal samples collected from rainbow trout farms in three European countries.

characteristic: sample derived from

text: uncultured Lactobacillus sp.

text: NextSeq 550

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094868_bin.4_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: Gut content

characteristic: environmental medium

text: Spain

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: uncultured Streptococcus sp.

characteristic: project name

text: uncultured Streptococcus sp.

text: NextSeq 550

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094868_bin.7_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Gut content

text: Spain

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Corynebacterium sp.

characteristic: organism

characteristic: sample derived from

text: uncultured Corynebacterium sp.

text: NextSeq 550

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094868_bin.8_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run ERR5094868 of study ERP126324.

text: Gut content

characteristic: environmental medium

text: Spain

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: uncultured Lactobacillus sp.

characteristic: project name

text: uncultured Lactobacillus sp.

text: NextSeq 550

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus reuteri

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094868_bin.9_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run ERR5094873 of study ERP126324.

characteristic: description

text: Gut content

text: Spain

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Lactobacillus sp.

characteristic: organism

characteristic: sample derived from

text: uncultured Lactobacillus sp.

text: NextSeq 550

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus sakei

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094873_bin.3_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: Gut content

characteristic: environmental medium

text: Spain

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: Lactococcus raffinolactis

characteristic: project name

text: Lactococcus raffinolactis

text: NextSeq 550

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Lactococcus;s__Lactococcus raffinolactis

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094873_bin.4_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run ERR5094881 of study ERP126324.

characteristic: description

text: Gut content

text: Spain

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: Lactococcus lactis

characteristic: organism

characteristic: sample derived from

text: Lactococcus lactis

text: NextSeq 550

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Lactococcus;s__Lactococcus lactis

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094881_bin.2_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run ERR5094887 of study ERP126324.

text: Gut content

characteristic: environmental medium

text: Spain

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: Kluyvera intermedia

text: Shotgun metagenomics sequencing results for intestinal samples collected from rainbow trout farms in three European countries.

characteristic: project name

text: Kluyvera intermedia

text: NextSeq 550

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Kluyvera;s__Kluyvera intermedia

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094887_bin.1_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run ERR5094888 of study ERP126324.

characteristic: description

text: Gut content

text: Poland

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured bacterium

text: NextSeq 550

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__;c__;o__;f__;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094888_bin.1_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: Gut content

characteristic: environmental medium

text: Poland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: uncultured Prevotella sp.

characteristic: project name

text: uncultured Prevotella sp.

text: NextSeq 550

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094888_bin.3_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Gut content

text: Poland

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: NextSeq 550

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094888_bin.4_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: Gut content

characteristic: environmental medium

text: Poland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: uncultured bacterium

characteristic: project name

text: uncultured bacterium

text: NextSeq 550

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094888_bin.5_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Gut content

text: Poland

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Bacteroidales bacterium

text: NextSeq 550

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094888_bin.6_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.15.3

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: Gut content

characteristic: environmental medium

text: Poland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: uncultured Bacteroidales bacterium

characteristic: project name

text: uncultured Bacteroidales bacterium

text: NextSeq 550

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094888_bin.7_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Gut content

text: Poland

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Bacteroidales bacterium

text: NextSeq 550

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094888_bin.8_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: Gut content

characteristic: environmental medium

text: Poland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: uncultured Prevotella sp.

text: Shotgun metagenomics sequencing results for intestinal samples collected from rainbow trout farms in three European countries.

characteristic: project name

text: uncultured Prevotella sp.

text: NextSeq 550

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094888_bin.9_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run ERR5094894 of study ERP126324.

characteristic: description

text: Gut content

text: Poland

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: Weissella oryzae

characteristic: organism

characteristic: sample derived from

text: Weissella oryzae

text: NextSeq 550

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Weissella;s__Weissella oryzae

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094894_bin.1_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: Gut content

characteristic: environmental medium

text: Poland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: Obesumbacterium proteus

characteristic: project name

text: Obesumbacterium proteus

text: NextSeq 550

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Hafniaceae;g__Obesumbacterium;s__Obesumbacterium proteus

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094894_bin.3_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run ERR5094895 of study ERP126324.

characteristic: description

text: Gut content

text: Poland

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: Lactococcus garvieae

characteristic: organism

characteristic: sample derived from

text: Lactococcus garvieae

text: NextSeq 550

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Lactococcus;s__Lactococcus garvieae

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094895_bin.1_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run ERR5094897 of study ERP126324.

text: Gut content

characteristic: environmental medium

text: Poland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: Cetobacterium somerae

characteristic: project name

text: Cetobacterium somerae

text: NextSeq 550

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Cetobacterium;s__Cetobacterium somerae

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094897_bin.1_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Gut content

text: Poland

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Clostridium sp.

characteristic: organism

characteristic: sample derived from

text: uncultured Clostridium sp.

text: NextSeq 550

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094897_bin.2_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.15.3

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run ERR5094899 of study ERP126324.

text: Gut content

characteristic: environmental medium

text: Poland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: uncultured Clostridia bacterium

characteristic: project name

text: uncultured Clostridia bacterium

text: NextSeq 550

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__;s__

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094899_bin.1_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Gut content

text: Poland

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: Aeromonas sobria

characteristic: organism

text: Shotgun metagenomics sequencing results for intestinal samples collected from rainbow trout farms in three European countries.

characteristic: sample derived from

text: Aeromonas sobria

text: NextSeq 550

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Aeromonadales;f__Aeromonadaceae;g__Aeromonas;s__Aeromonas sobria

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094899_bin.2_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: Gut content

characteristic: environmental medium

text: Poland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: uncultured Deefgea sp.

characteristic: project name

text: uncultured Deefgea sp.

text: NextSeq 550

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Deefgea;s__

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094899_bin.3_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run ERR5094900 of study ERP126324.

characteristic: description

text: Gut content

text: Poland

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Citrobacter sp.

characteristic: organism

characteristic: sample derived from

text: uncultured Citrobacter sp.

text: NextSeq 550

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Citrobacter;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094900_bin.1_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: megahit v1.2.9

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run ERR5094901 of study ERP126324.

text: Gut content

characteristic: environmental medium

text: Poland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: Morganella psychrotolerans

characteristic: project name

text: Morganella psychrotolerans

text: NextSeq 550

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Morganellaceae;g__Morganella;s__Morganella psychrotolerans

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094901_bin.3_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: megahit v1.2.9

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Gut content

text: Poland

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Peptostreptococcaceae bacterium

characteristic: organism

characteristic: sample derived from

text: NextSeq 550

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094901_bin.4_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: megahit v1.2.9

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: Gut content

characteristic: environmental medium

text: Poland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: Yersinia ruckeri

characteristic: project name

text: Yersinia ruckeri

text: NextSeq 550

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Yersinia;s__Yersinia ruckeri

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094901_bin.5_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

characteristic: assembly quality

text: megahit v1.2.9

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Gut content

text: Poland

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Rhodobacteraceae bacterium

characteristic: organism

text: Shotgun metagenomics sequencing results for intestinal samples collected from rainbow trout farms in three European countries.

characteristic: sample derived from

text: uncultured Rhodobacteraceae bacterium

text: NextSeq 550

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094901_bin.7_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run ERR5094903 of study ERP126324.

text: Gut content

characteristic: environmental medium

text: Poland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: uncultured Cetobacterium sp.

characteristic: project name

text: uncultured Cetobacterium sp.

text: NextSeq 550

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Cetobacterium;s__

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094903_bin.2_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Gut content

text: Poland

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: Aeromonas sobria

characteristic: organism

characteristic: sample derived from

text: Aeromonas sobria

text: NextSeq 550

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Aeromonadales;f__Aeromonadaceae;g__Aeromonas;s__Aeromonas sobria

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094903_bin.3_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: Gut content

characteristic: environmental medium

text: Poland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: uncultured Fusobacteriaceae bacterium

characteristic: project name

text: uncultured Fusobacteriaceae bacterium

text: NextSeq 550

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__;s__

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094903_bin.4_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Gut content

text: Poland

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: uncultured Shewanella sp.

characteristic: organism

characteristic: sample derived from

text: uncultured Shewanella sp.

text: NextSeq 550

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Shewanellaceae;g__Shewanella;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094903_bin.5_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: Gut content

characteristic: environmental medium

text: Poland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: uncultured Fusobacteriaceae bacterium

characteristic: project name

text: uncultured Fusobacteriaceae bacterium

text: NextSeq 550

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094903_bin.6_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Gut content

text: Poland

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: Deefgea rivuli

characteristic: organism

characteristic: sample derived from

text: Deefgea rivuli

text: NextSeq 550

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Deefgea;s__Deefgea rivuli

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094903_bin.7_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run ERR5094904 of study ERP126324.

text: Gut content

characteristic: environmental medium

text: Poland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: uncultured Mycoplasmataceae bacterium

text: Shotgun metagenomics sequencing results for intestinal samples collected from rainbow trout farms in three European countries.

characteristic: project name

text: uncultured Mycoplasmataceae bacterium

text: NextSeq 550

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__;s__

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094904_bin.1_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run ERR5094905 of study ERP126324.

characteristic: description

text: Gut content

text: Poland

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: Streptococcus uberis

characteristic: organism

characteristic: sample derived from

text: Streptococcus uberis

text: NextSeq 550

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus uberis

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094905_bin.2_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Rainbow trout digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: CheckM

text: Gut content

characteristic: environmental medium

text: Poland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: fish gut metagenome

text: Gut

characteristic: local environmental context

text: fish gut metagenome

text: uncultured Deefgea sp.

characteristic: project name

text: uncultured Deefgea sp.

text: NextSeq 550

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Deefgea;s__

text: multi-marker approach

text: Metagenome-assembled genome: ERR5094905_bin.3_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Rainbow trout digestive system

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Gut content

text: Poland

text: not provided

text: not provided

text: metagenome-assembled genome

characteristic: investigation type

text: fish gut metagenome

text: Gut

text: fish gut metagenome

characteristic: metagenomic source

text: Streptococcus pyogenes

characteristic: organism

characteristic: sample derived from

text: Streptococcus pyogenes

text: NextSeq 550

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus pyogenes

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR5094905_bin.4_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

characteristic: broad-scale environmental context

characteristic: collection date

unit: m

characteristic: depth

text: brackish water (ENVO:00002019)

characteristic: environmental medium

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

text: brackish water body (ENVO:01001321)

characteristic: local environmental context

text: aquatic metagenome

text: aerobic

characteristic: oxygenation status of sample

text: 341F (CCTACGGGNGGCWGCAG) and 805R (GACTACHVGGGTATCTAATCC)

characteristic: pcr primers

text: LMO 2012-13 (3 um)

characteristic: project name

text: Filter setup: 3

characteristic: sample collection device or method

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: LMO 16S 2012-05-07, filter fraction:3

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: mimarks-survey

characteristic: investigation type

text: brackish water body (ENVO:01001321)

text: aquatic metagenome

characteristic: organism

text: aerobic

text: LMO 2012-13 (3 um)

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

text: LMO 16S 2012-05-10, filter fraction:3

characteristic: title

text: water


text: LNU

text: public

text: marine pelagic biome (ENVO:01000023)

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: brackish water (ENVO:00002019)

characteristic: environmental medium

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

text: brackish water body (ENVO:01001321)

characteristic: local environmental context

text: aquatic metagenome

text: aerobic

characteristic: oxygenation status of sample

characteristic: pcr primers

text: LMO 2012-13 (3 um)

characteristic: project name

text: Filter setup: 3

characteristic: sample collection device or method

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: LMO 16S 2012-05-16, filter fraction:3

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: mimarks-survey

text: brackish water body (ENVO:01001321)

text: aquatic metagenome

text: aerobic

text: LMO 2012-13 (3 um)

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: LMO 16S 2012-05-21, filter fraction:3

text: water

characteristic: water environmental package


text: LNU

text: public

text: marine pelagic biome (ENVO:01000023)

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: brackish water (ENVO:00002019)

characteristic: environmental medium

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: brackish water body (ENVO:01001321)

characteristic: local environmental context

text: aquatic metagenome

characteristic: organism

text: aerobic

characteristic: oxygenation status of sample

characteristic: pcr primers

text: LMO 2012-13 (3 um)

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

text: LMO 16S 2012-05-24, filter fraction:3

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: mimarks-survey

text: brackish water body (ENVO:01001321)

text: aquatic metagenome

text: aerobic

text: LMO 2012-13 (3 um)

characteristic: project name

text: Filter setup: 3

characteristic: sample collection device or method

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: LMO 16S 2012-05-28, filter fraction:3

text: water


text: LNU

text: public

text: marine pelagic biome (ENVO:01000023)

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: brackish water (ENVO:00002019)

characteristic: environmental medium

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: brackish water body (ENVO:01001321)

characteristic: local environmental context

text: aquatic metagenome

characteristic: organism

text: aerobic

text: LMO 2012-13 (3 um)

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: LMO 16S 2012-05-31, filter fraction:3

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: mimarks-survey

text: brackish water body (ENVO:01001321)

text: aquatic metagenome

text: aerobic

characteristic: oxygenation status of sample

characteristic: pcr primers

text: LMO 2012-13 (3 um)

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

text: LMO 16S 2012-06-04, filter fraction:3

characteristic: title

text: water


text: LNU

text: public

text: marine pelagic biome (ENVO:01000023)

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: brackish water (ENVO:00002019)

characteristic: environmental medium

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: brackish water body (ENVO:01001321)

characteristic: local environmental context

text: aquatic metagenome

characteristic: organism

text: aerobic

text: LMO 2012-13 (3 um)

characteristic: project name

text: Filter setup: 3

characteristic: sample collection device or method

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: LMO 16S 2012-06-07, filter fraction:3

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: mimarks-survey

text: brackish water body (ENVO:01001321)

text: aquatic metagenome

text: aerobic

text: LMO 2012-13 (3 um)

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: LMO 16S 2012-06-13, filter fraction:3, 1st seq.

text: water

characteristic: water environmental package


text: LNU

text: public

text: marine pelagic biome (ENVO:01000023)

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: brackish water (ENVO:00002019)

characteristic: environmental medium

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: brackish water body (ENVO:01001321)

characteristic: local environmental context

text: aquatic metagenome

characteristic: organism

text: aerobic

characteristic: oxygenation status of sample

characteristic: pcr primers

text: LMO 2012-13 (3 um)

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

text: LMO 16S 2012-06-18, filter fraction:3

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: mimarks-survey

text: brackish water body (ENVO:01001321)

text: aquatic metagenome

text: aerobic

text: LMO 2012-13 (3 um)

characteristic: project name

text: Filter setup: 3

characteristic: sample collection device or method

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: LMO 16S 2012-06-21, filter fraction:3

text: water


text: LNU

text: public

text: marine pelagic biome (ENVO:01000023)

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: brackish water (ENVO:00002019)

characteristic: environmental medium

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: brackish water body (ENVO:01001321)

characteristic: local environmental context

text: aquatic metagenome

characteristic: organism

text: aerobic

text: LMO 2012-13 (3 um)

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: LMO 16S 2012-06-28, filter fraction:3

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: mimarks-survey

text: brackish water body (ENVO:01001321)

text: aquatic metagenome

text: aerobic

characteristic: oxygenation status of sample

characteristic: pcr primers

text: LMO 2012-13 (3 um)

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

text: LMO 16S 2012-07-02, filter fraction:3

characteristic: title

text: water


text: LNU

text: public

text: marine pelagic biome (ENVO:01000023)

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: brackish water (ENVO:00002019)

characteristic: environmental medium

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: brackish water body (ENVO:01001321)

characteristic: local environmental context

text: aquatic metagenome

characteristic: organism

text: aerobic

text: LMO 2012-13 (3 um)

characteristic: project name

text: Filter setup: 3

characteristic: sample collection device or method

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: LMO 16S 2012-07-05, filter fraction:3

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: mimarks-survey

text: brackish water body (ENVO:01001321)

text: aquatic metagenome

text: aerobic

text: LMO 2012-13 (3 um)

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: LMO 16S 2012-07-09, filter fraction:3

text: water

characteristic: water environmental package


text: LNU

text: public

text: marine pelagic biome (ENVO:01000023)

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: brackish water (ENVO:00002019)

characteristic: environmental medium

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: brackish water body (ENVO:01001321)

characteristic: local environmental context

text: aquatic metagenome

characteristic: organism

text: aerobic

characteristic: oxygenation status of sample

characteristic: pcr primers

text: LMO 2012-13 (3 um)

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

text: LMO 16S 2012-07-12, filter fraction:3

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: mimarks-survey

text: brackish water body (ENVO:01001321)

text: aquatic metagenome

text: aerobic

text: LMO 2012-13 (3 um)

characteristic: project name

text: Filter setup: 3

characteristic: sample collection device or method

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: LMO 16S 2012-07-17, filter fraction:3

text: water


text: LNU

text: public

text: marine pelagic biome (ENVO:01000023)

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: brackish water (ENVO:00002019)

characteristic: environmental medium

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: brackish water body (ENVO:01001321)

characteristic: local environmental context

text: aquatic metagenome

characteristic: organism

text: aerobic

text: LMO 2012-13 (3 um)

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: LMO 16S 2012-07-24, filter fraction:3, 1st seq.

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: mimarks-survey

text: brackish water body (ENVO:01001321)

text: aquatic metagenome

text: aerobic

characteristic: oxygenation status of sample

characteristic: pcr primers

text: LMO 2012-13 (3 um)

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

text: LMO 16S 2012-07-26, filter fraction:3

characteristic: title

text: water


text: LNU

text: public

text: marine pelagic biome (ENVO:01000023)

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: brackish water (ENVO:00002019)

characteristic: environmental medium

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: brackish water body (ENVO:01001321)

characteristic: local environmental context

text: aquatic metagenome

characteristic: organism

text: aerobic

text: LMO 2012-13 (3 um)

characteristic: project name

text: Filter setup: 3

characteristic: sample collection device or method

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: LMO 16S 2012-07-30, filter fraction:3

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: mimarks-survey

text: brackish water body (ENVO:01001321)

text: aquatic metagenome

text: aerobic

text: LMO 2012-13 (3 um)

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: LMO 16S 2012-08-02, filter fraction:3

text: water

characteristic: water environmental package


text: LNU

text: public

text: marine pelagic biome (ENVO:01000023)

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: brackish water (ENVO:00002019)

characteristic: environmental medium

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: brackish water body (ENVO:01001321)

characteristic: local environmental context

text: aquatic metagenome

characteristic: organism

text: aerobic

characteristic: oxygenation status of sample

characteristic: pcr primers

text: LMO 2012-13 (3 um)

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

text: LMO 16S 2012-08-06, filter fraction:3

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: mimarks-survey

text: brackish water body (ENVO:01001321)

text: aquatic metagenome

text: aerobic

text: LMO 2012-13 (3 um)

characteristic: project name

text: Filter setup: 3

characteristic: sample collection device or method

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: LMO 16S 2012-08-09, filter fraction:3

text: water


text: LNU

text: public

text: marine pelagic biome (ENVO:01000023)

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: brackish water (ENVO:00002019)

characteristic: environmental medium

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: brackish water body (ENVO:01001321)

characteristic: local environmental context

text: aquatic metagenome

characteristic: organism

text: aerobic

text: LMO 2012-13 (3 um)

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: LMO 16S 2012-08-13, filter fraction:3

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: mimarks-survey

text: brackish water body (ENVO:01001321)

text: aquatic metagenome

text: aerobic

characteristic: oxygenation status of sample

characteristic: pcr primers

text: LMO 2012-13 (3 um)

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

text: LMO 16S 2012-08-16, filter fraction:3

characteristic: title

text: water


text: LNU

text: public

text: marine pelagic biome (ENVO:01000023)

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: brackish water (ENVO:00002019)

characteristic: environmental medium

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: brackish water body (ENVO:01001321)

characteristic: local environmental context

text: aquatic metagenome

characteristic: organism

text: aerobic

text: LMO 2012-13 (3 um)

characteristic: project name

text: Filter setup: 3

characteristic: sample collection device or method

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: LMO 16S 2012-08-20, filter fraction:3

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LNU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: mimarks-survey

text: brackish water body (ENVO:01001321)

text: aquatic metagenome

text: aerobic

text: LMO 2012-13 (3 um)

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: LMO 16S 2012-08-23, filter fraction:3

text: water

characteristic: water environmental package


text: LNU

text: public

text: marine pelagic biome (ENVO:01000023)

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: brackish water (ENVO:00002019)

characteristic: environmental medium

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mimarks-survey

characteristic: investigation type

text: brackish water body (ENVO:01001321)

characteristic: local environmental context

text: aquatic metagenome

characteristic: organism

text: aerobic

characteristic: oxygenation status of sample

characteristic: pcr primers

text: LMO 2012-13 (3 um)

text: Filter setup: 3

text: aquatic metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

text: LMO 16S 2012-08-28, filter fraction:3

characteristic: title

text: water