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text: hCoV-19/Switzerland/SZ-ETHZ-38004408/2022

characteristic: organism


E-MTAB-12181:Sample 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

text: public

text: E-MTAB-12181:Sample 1

tag: Namespace:Department of Cell and Molecular Biology, Karolinska Institutet,  Stockholm, Sweden

characteristic: Submitter Id

unit: week

characteristic: age

text: ArrayExpress

text: house mouse

characteristic: common name

text: Protocols: Skin tissue was dissected from 9 week old female F1 offspring of matings between CAST/EiJ and C57BL/6J mice. Cells were dissociated from skin as described in Joost et al., or using GentleMACS (Miltenyi Biotec); with both methods giving similar cell yields and viability. Briefly, for the GentleMACS method, dorsal skin was cut and minced into small pieces (approximately 1x1mm) and incubated in HBSS (Sigma) + 0.04% BSA (Sigma) + 0.2% Collagenase Ia (Sigma) at 37°C for 60 minutes with occasional agitation. Thereafter this slurry was processed on a GentleMACS (Miltenyi Biotec) with 2x Program D, cell-strained (70um) and washed. Residual tissue was further treated with HBSS + 0.05% Trypsin-EDTA (Sigma) at 37°C for 15 minutes and processed likewise. For the Joost et al method, GentleMACS dissociation was substituted with manual disaggregation by smashing tissue fragments against a cell strainer with the piston from a 5 mL syringe Cell lysis during sorting by FACS. Cells were subjected to the Smart-seq2 protocol with no modification.

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

characteristic: individual

text: Mus musculus

text: Mus musculus

text: skin

characteristic: organism part

text: dorsal skin

characteristic: sampling site

text: Mus musculus

text: female

characteristic: sex

text: C57BL/6 x CAST/EiJ

characteristic: strain

text: Sample 1


E-MTAB-12181:Sample 10

text: Department of Cell and Molecular Biology, Karolinska Institutet, Stockholm, Sweden

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12181:Sample 10

text: ArrayExpress

characteristic: broker name

text: house mouse

text: adult

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 10

characteristic: title


E-MTAB-12181:Sample 100

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text: public

text: E-MTAB-12181:Sample 100

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: house mouse

text: adult

text: wild type genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 100


E-MTAB-12181:Sample 101

text: public

text: E-MTAB-12181:Sample 101

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text: house mouse

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

characteristic: individual

text: Mus musculus

text: Mus musculus

text: skin

characteristic: organism part

text: dorsal skin

characteristic: sampling site

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 101


E-MTAB-12181:Sample 102

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12181:Sample 102

text: ArrayExpress

text: house mouse

text: adult

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

characteristic: sex

text: C57BL/6 x CAST/EiJ

characteristic: strain

text: Sample 102


E-MTAB-12181:Sample 103

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

text: public

text: E-MTAB-12181:Sample 103

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: house mouse

text: adult

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 103

characteristic: title


E-MTAB-12181:Sample 104

text: public

text: E-MTAB-12181:Sample 104

characteristic: age

text: ArrayExpress

text: house mouse

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 104


E-MTAB-12181:Sample 105

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text: E-MTAB-12181:Sample 105

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text: house mouse

text: adult

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: skin

characteristic: organism part

text: dorsal skin

characteristic: sampling site

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 105


E-MTAB-12181:Sample 106

characteristic: ENA-CHECKLIST

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text: E-MTAB-12181:Sample 106

characteristic: Submitter Id

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text: house mouse

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text: wild type genotype

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text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

characteristic: sex

text: C57BL/6 x CAST/EiJ

characteristic: strain

text: Sample 106


E-MTAB-12181:Sample 107

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text: E-MTAB-12181:Sample 107

characteristic: age

text: ArrayExpress

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characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 107

characteristic: title


E-MTAB-12181:Sample 108

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12181:Sample 108

text: ArrayExpress

text: house mouse

text: adult

text: wild type genotype

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 108


E-MTAB-12181:Sample 109

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-12181:Sample 109

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

text: adult

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: skin

characteristic: organism part

text: dorsal skin

characteristic: sampling site

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 109


E-MTAB-12181:Sample 11

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text: E-MTAB-12181:Sample 11

characteristic: age

text: ArrayExpress

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characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

characteristic: sex

text: C57BL/6 x CAST/EiJ

characteristic: strain

text: Sample 11


E-MTAB-12181:Sample 110

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12181:Sample 110

text: ArrayExpress

text: house mouse

text: adult

text: wild type genotype

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 110

characteristic: title


E-MTAB-12181:Sample 111

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-12181:Sample 111

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

text: adult

text: wild type genotype

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 111


E-MTAB-12181:Sample 112

text: public

text: E-MTAB-12181:Sample 112

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: skin

characteristic: organism part

text: dorsal skin

characteristic: sampling site

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 112


E-MTAB-12181:Sample 113

characteristic: INSDC center name

characteristic: INSDC first public

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12181:Sample 113

text: ArrayExpress

text: house mouse

text: adult

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

characteristic: sex

text: C57BL/6 x CAST/EiJ

characteristic: strain

text: Sample 113


E-MTAB-12181:Sample 114

characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-12181:Sample 114

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

text: adult

text: wild type genotype

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 114

characteristic: title


E-MTAB-12181:Sample 115

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text: E-MTAB-12181:Sample 115

characteristic: age

text: ArrayExpress

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text: house mouse

characteristic: common name

characteristic: description

text: adult

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characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 115


E-MTAB-12181:Sample 116

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12181:Sample 116

text: ArrayExpress

text: house mouse

text: adult

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: skin

characteristic: organism part

text: dorsal skin

characteristic: sampling site

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 116


E-MTAB-12181:Sample 117

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-12181:Sample 117

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

text: adult

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

characteristic: sex

text: C57BL/6 x CAST/EiJ

characteristic: strain

text: Sample 117


E-MTAB-12181:Sample 118

text: public

text: E-MTAB-12181:Sample 118

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 118

characteristic: title


E-MTAB-12181:Sample 119

characteristic: INSDC center name

characteristic: INSDC first public

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12181:Sample 119

text: ArrayExpress

text: house mouse

text: adult

text: wild type genotype

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 119


E-MTAB-12181:Sample 12

characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

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text: E-MTAB-12181:Sample 12

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

text: adult

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: skin

characteristic: organism part

text: dorsal skin

characteristic: sampling site

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 12


E-MTAB-12181:Sample 120

text: public

text: E-MTAB-12181:Sample 120

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

characteristic: sex

text: C57BL/6 x CAST/EiJ

characteristic: strain

text: Sample 120


E-MTAB-12181:Sample 121

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12181:Sample 121

text: ArrayExpress

text: house mouse

text: adult

text: wild type genotype

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 121

characteristic: title


E-MTAB-12181:Sample 122

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-12181:Sample 122

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

text: adult

text: wild type genotype

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 122


E-MTAB-12181:Sample 123

text: public

text: E-MTAB-12181:Sample 123

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: skin

characteristic: organism part

text: dorsal skin

characteristic: sampling site

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 123


E-MTAB-12181:Sample 124

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characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12181:Sample 124

text: ArrayExpress

text: house mouse

text: adult

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

characteristic: sex

text: C57BL/6 x CAST/EiJ

characteristic: strain

text: Sample 124


E-MTAB-12181:Sample 125

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-12181:Sample 125

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

text: adult

text: wild type genotype

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 125

characteristic: title


E-MTAB-12181:Sample 126

text: public

text: E-MTAB-12181:Sample 126

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 126


E-MTAB-12181:Sample 127

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12181:Sample 127

text: ArrayExpress

text: house mouse

text: adult

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: skin

characteristic: organism part

text: dorsal skin

characteristic: sampling site

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 127


E-MTAB-12181:Sample 128

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-12181:Sample 128

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

text: adult

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

characteristic: sex

text: C57BL/6 x CAST/EiJ

characteristic: strain

text: Sample 128


E-MTAB-12181:Sample 129

text: public

text: E-MTAB-12181:Sample 129

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 129

characteristic: title


E-MTAB-12181:Sample 13

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characteristic: INSDC first public

characteristic: INSDC last update

text: public

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characteristic: SRA accession

text: E-MTAB-12181:Sample 13

text: ArrayExpress

text: house mouse

text: adult

text: wild type genotype

characteristic: individual

text: Mus musculus

characteristic: organism

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 13


E-MTAB-12181:Sample 130

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-12181:Sample 130

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

text: adult

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: skin

characteristic: organism part

text: dorsal skin

characteristic: sampling site

text: Mus musculus

text: female

text: C57BL/6 x CAST/EiJ

text: Sample 130


E-MTAB-12181:Sample 131

text: public

text: E-MTAB-12181:Sample 131

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

text: Mus musculus

text: Mus musculus

text: skin

text: dorsal skin

text: Mus musculus

text: female

characteristic: sex

text: C57BL/6 x CAST/EiJ

characteristic: strain

text: Sample 131