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text: hCoV-19/Switzerland/GE-HUG-39523120/2022


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text: restricted access

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characteristic: host sex

text: restricted access

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text: hCoV-19/Switzerland/ZH-SNRCI-HUG-39541146/2022

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text: restricted access

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text: Samuel Cordey, Aline Mamin, Francisco Perez, Ana Rita Goncalves, Laurent Kaiser, Lorenzo Cerutti, Cedric Howald, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

text: Switzerland

characteristic: geographic location (country and/or sea)

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text: Human

text: restricted access

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text: restricted access

text: restricted access

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text: Severe acute respiratory syndrome coronavirus 2


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text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-39572164/2022

text: active surveillance not initiated by an outbreak


characteristic: External Id

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text: hCoV-19/Switzerland/GE-HUG-39568989/2022

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text: hCoV-19/Switzerland/GE-HUG-39532488/2022


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text: Samuel Cordey, Aline Mamin, Francisco Perez, Ana Rita Goncalves, Laurent Kaiser, Lorenzo Cerutti, Cedric Howald, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

text: Switzerland

characteristic: geographic location (country and/or sea)

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text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-39502427/2022


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text: restricted access

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text: restricted access

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text: hCoV-19/Switzerland/GE-HUG-39543645/2022


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characteristic: host sex

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text: hCoV-19/Switzerland/GE-HUG-39542769/2022

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text: Switzerland

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text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-39566370/2022


characteristic: ENA-CHECKLIST

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text: hCoV-19/Switzerland/TI-SNRCI-HUG-39518414/2022


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text: restricted access

characteristic: host sex

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text: hCoV-19/Switzerland/GE-HUG-39553154/2022

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text: Severe acute respiratory syndrome coronavirus 2

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text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-39577206/2022

text: active surveillance in response to outbreak


characteristic: External Id

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text: restricted access

text: hCoV-19/Switzerland/UN-HUG-39519168/2022

text: active surveillance not initiated by an outbreak


characteristic: ENA-CHECKLIST

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text: HUG

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text: SIB

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text: Human

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-39531080/2022

characteristic: isolate

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text: SIB

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text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-HUG-39523010/2022


characteristic: ENA-CHECKLIST

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text: HUG

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text: Switzerland

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text: Homo sapiens

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text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-39572527/2022


characteristic: External Id

characteristic: GISAID Accession ID

text: HUG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SIB

text: Laboratoire de virologie, Geneva, Switzerland

text: Switzerland

text: GE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-39559597/2022

characteristic: isolate

characteristic: organism

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text: HUG

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text: public

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text: SIB

characteristic: broker name

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characteristic: collection date

text: Samuel Cordey, Aline Mamin, Francisco Perez, Ana Rita Goncalves, Laurent Kaiser, Lorenzo Cerutti, Cedric Howald, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

text: Switzerland

characteristic: geographic location (country and/or sea)

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-SNRCI-HUG-39562736/2022


characteristic: External Id

characteristic: GISAID Accession ID

text: HUG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: SIB

characteristic: collector name

text: Switzerland

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-39532623/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: HUG

characteristic: INSDC last update

text: public

text: SIB

text: Switzerland

text: GE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-39563989/2022

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: External Id

characteristic: GISAID Accession ID

text: HUG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SNRCI-HUG-39518115/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:London School of Hygiene and Tropical Medicine

text: Asian malaria mosquito

characteristic: common name

text: Ethiopian Anopheles stephensi amplicons

characteristic: description

text: Anopheles stephensi

text: Anopheles stephensi


characteristic: External Id

text: London School of Hygiene and Tropical Medicine

text: public

text: Asian malaria mosquito

text: Ethiopian Anopheles stephensi amplicons

text: Anopheles stephensi

characteristic: organism

text: Anopheles stephensi

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Asian malaria mosquito

text: SDA500 Anopheles stephensi amplicons

text: Anopheles stephensi

text: Anopheles stephensi


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Haloferax strain H26 was grown in Hv-YPC medium at 42�C under agitation as described in Allers et al 2015 (https://www.nature.com/articles/nrg1504); Replicate 1

text: Haloferax volcanii DS2

text: Haloferax volcanii DS2

characteristic: strain

text: Haloferav volcanii total RNA replicate 1


text: public

text: Haloferax volcanii DS2

text: Haloferax volcanii DS2

text: Haloferav volcanii total RNA replicate 2


text: public

text: First, genomic DNA was isolated from H. volcanii (H26) using standard phenol-chloroform extraction. The DNA was used as template for the PCR amplification of the 16S region using primers containing sites necessary for T7-based in vitro transcription (fwd: TAATACGACTCACTATAGGGATTCCGGTTGATCCTGCCGGA, rev: AGGAGGTGATCCAGCCGCAGA). The T7 RiboMax express kit (Promega) was used for the in vitro production of 16S rRNA under standard conditions.

text: Haloferax volcanii DS2

text: Haloferax volcanii DS2

text: PCR template origin H26

text: In vitro transcript Haloferax volcanii 16S rRNA


text: public

text: Sulfolobus acidocaldarius strain MW001 was grown in Brock medium �at 75�C as described in Knueppel et al. 2017 (https://pubmed.ncbi.nlm.nih.gov/28286499/); Replicate 1

text: Sulfolobus acidocaldarius

text: Sulfolobus acidocaldarius

text: Sulfolobus acidocaldarius total RNA replicate 1


text: public

text: Sulfolobus acidocaldarius strain MW001 was grown in Brock medium �at 75�C as described in Knueppel et al. 2017 (https://pubmed.ncbi.nlm.nih.gov/28286499/). Replicate 2

text: Sulfolobus acidocaldarius

text: Sulfolobus acidocaldarius

text: Sulfolobus acidocaldarius total RNA replicate 2


text: public

text: Pyrococcus furiosus strain DSM 3638 cells were grown anaerobically in 40 ml SME medium33 supplemented with 40 mM pyruvate, 0.1 % peptone and 0.1 % yeast extract at 95�C to mid-exponential phase

text: Pyrococcus furiosus DSM 3638

text: Pyrococcus furiosus DSM 3638

text: DSM 3638

text: Pyrococcus furiosus total RNA replicate 1


characteristic: GISAID Accession ID

text: Medisupport

text: public

text: SIB

characteristic: broker name

text: Dianalabs, Geneva, Switzerland

characteristic: collecting institution

characteristic: collection date

text: Tanguy ARAUD, Geraldine Jost, Katia Jaton, Nadia Liassine

characteristic: collector name

text: Switzerland

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-DIA-161602904301/2022

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: active surveillance not initiated by an outbreak


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Medisupport

characteristic: INSDC center name

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text: public

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text: SIB

text: Dianalabs, Geneva, Switzerland

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-DIA-011610735901/2022

characteristic: organism

characteristic: title


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text: Medisupport

text: public

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text: SIB

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text: Dianalabs, Geneva, Switzerland

characteristic: collecting institution

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text: Switzerland

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-DIA-011611582301/2022


characteristic: ENA-CHECKLIST

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text: Medisupport

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text: Dianalabs, Geneva, Switzerland

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text: Human

text: restricted access

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characteristic: host scientific name

text: restricted access

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text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-DIA-161602973101/2022

characteristic: isolate

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text: Medisupport

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text: SIB

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text: Dianalabs, Geneva, Switzerland

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-DIA-011610731001/2022

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: Medisupport

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text: SIB

text: Dianalabs, Geneva, Switzerland

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-DIA-011611587102/2022


characteristic: GISAID Accession ID

text: Medisupport

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characteristic: organism

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text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

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text: Sheep digestive system

characteristic: broad-scale environmental context

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characteristic: completeness score

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text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR10912533 of study SRP242661.

characteristic: description

text: Rumen content

characteristic: environmental medium

text: not provided

text: not provided

unit: DD

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: sheep gut metagenome

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text: sheep gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

text: Disruption of the ruminal homeostasis by malnutrition involved in systemic ruminal microbiota-host interactions in a pregnant sheep model

characteristic: project name

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text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR10912533_bin.1_metaWRAP_v1.3_MAG


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characteristic: Submitter Id

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text: metaSPAdes v3.15.3

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characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

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text: Rumen content

text: not provided

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text: not provided

text: not provided

text: metagenome-assembled genome

text: sheep gut metagenome

text: Rumen

text: sheep gut metagenome

text: uncultured Fibrobacter sp.

characteristic: organism

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text: HiSeq X Ten

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Fibrobacteres;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR10912533_bin.10_metaWRAP_v1.3_MAG

characteristic: title


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characteristic: description

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text: not provided

text: not provided

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text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

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characteristic: local environmental context

text: sheep gut metagenome

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text: uncultured Lachnospiraceae bacterium

characteristic: project name

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text: HiSeq X Ten

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text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR10912533_bin.11_metaWRAP_v1.3_MAG


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characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Sheep digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: CheckM

text: Rumen content

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: sheep gut metagenome

text: Rumen

text: sheep gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: uncultured Clostridia bacterium

text: HiSeq X Ten

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR10912533_bin.12_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Sheep digestive system

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Rumen content

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: sheep gut metagenome

text: Rumen

characteristic: local environmental context

text: sheep gut metagenome

characteristic: metagenomic source

text: uncultured Firmicutes bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Firmicutes bacterium

text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__;o__;f__;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR10912533_bin.13_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Sheep digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: CheckM

text: Rumen content

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: sheep gut metagenome

text: Rumen

text: sheep gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: uncultured Clostridia bacterium

text: HiSeq X Ten

text: multi-marker approach

text: Metagenome-assembled genome: SRR10912533_bin.17_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Sheep digestive system

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Rumen content

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: sheep gut metagenome

text: Rumen

characteristic: local environmental context

text: sheep gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: HiSeq X Ten

characteristic: sequencing method

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR10912533_bin.18_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Sheep digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: CheckM

text: Rumen content

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: sheep gut metagenome

text: Rumen

text: sheep gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: uncultured Lachnospiraceae bacterium

text: HiSeq X Ten

text: multi-marker approach

text: Metagenome-assembled genome: SRR10912533_bin.2_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Sheep digestive system

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Rumen content

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: sheep gut metagenome

text: Rumen

characteristic: local environmental context

text: sheep gut metagenome

characteristic: metagenomic source

text: uncultured Bacillales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Bacillales bacterium

text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR10912533_bin.22_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Sheep digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR10912533 of study SRP242661.

text: Rumen content

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: sheep gut metagenome

text: Rumen

text: sheep gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: Disruption of the ruminal homeostasis by malnutrition involved in systemic ruminal microbiota-host interactions in a pregnant sheep model

text: uncultured Clostridia bacterium

text: HiSeq X Ten

text: multi-marker approach

text: Metagenome-assembled genome: SRR10912533_bin.23_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Sheep digestive system

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Rumen content

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: sheep gut metagenome

text: Rumen

characteristic: local environmental context

text: sheep gut metagenome

characteristic: metagenomic source

text: uncultured Lachnoclostridium sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnoclostridium sp.

text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Lachnoclostridium;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR10912533_bin.24_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Sheep digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: CheckM

text: Rumen content

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: sheep gut metagenome

text: Rumen

text: sheep gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: uncultured Clostridia bacterium

text: HiSeq X Ten

text: multi-marker approach

text: Metagenome-assembled genome: SRR10912533_bin.26_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Sheep digestive system

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Rumen content

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: sheep gut metagenome

text: Rumen

characteristic: local environmental context

text: sheep gut metagenome

characteristic: metagenomic source

text: uncultured Prevotella sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Prevotella sp.

text: HiSeq X Ten

characteristic: sequencing method

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR10912533_bin.27_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Sheep digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: CheckM

text: Rumen content

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: sheep gut metagenome

text: Rumen

text: sheep gut metagenome

text: uncultured Bacteroidales bacterium

characteristic: organism

text: uncultured Bacteroidales bacterium

text: HiSeq X Ten

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__;g__;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR10912533_bin.29_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: Sheep digestive system

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Rumen content

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: sheep gut metagenome

text: Rumen

characteristic: local environmental context

text: sheep gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Bacteroidales bacterium

text: HiSeq X Ten

characteristic: sequencing method

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR10912533_bin.30_metaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: Sheep digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: CheckM

text: Rumen content

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: sheep gut metagenome

text: Rumen

text: sheep gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: uncultured Clostridia bacterium

text: HiSeq X Ten

text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__;s__

text: multi-marker approach

text: Metagenome-assembled genome: SRR10912533_bin.31_metaWRAP_v1.3_MAG

characteristic: title