characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-D-240519-92: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae; Sediminibacterium

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Chitinophagaceae bacterium

characteristic: project name

text: Chitinophagaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


status: PUBLIC

tag: attribute

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-D-240519-93: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

characteristic: description

text: mesocosm

text: Czech Republic

unit: DD

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-D-240519-94: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae; Sediminibacterium

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Chitinophagaceae bacterium

characteristic: project name

text: Chitinophagaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-D-240519-96: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-D-240519-97: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-1: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-100: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-102: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiaceae bacterium

characteristic: organism

text: Burkholderiaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-106: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiales genera incertae sedis; Aquabacterium

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiales bacterium

characteristic: project name

text: Burkholderiales bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-109: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Alcaligenaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Alcaligenaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-111: Bacteria; Proteobacteria; Oligoflexia; Bdellovibrionales; Bdellovibrionaceae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Bdellovibrionaceae bacterium

characteristic: project name

text: Bdellovibrionaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-117: Bacteria; Candidatus Gracilibacteria

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Candidatus Gracilibacteria bacterium

characteristic: organism

text: Candidatus Gracilibacteria bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-125: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Burkholderiaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-127: Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Verrucomicrobiales bacterium

characteristic: organism

text: Verrucomicrobiales bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-129: Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Acetobacteraceae bacterium

characteristic: project name

text: Acetobacteraceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-13: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-135: Bacteria; Proteobacteria; Alphaproteobacteria

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Alphaproteobacteria bacterium

characteristic: project name

text: Alphaproteobacteria bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

text: Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-137: Bacteria; Proteobacteria; Oligoflexia; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Bdellovibrionaceae bacterium

characteristic: organism

text: Bdellovibrionaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-14: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Alcaligenaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Alcaligenaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-141: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-142: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiaceae bacterium

characteristic: project name

text: Burkholderiaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-148: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Alcaligenaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Alcaligenaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-20: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiales bacterium

characteristic: project name

text: Burkholderiales bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-22: Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Phenylobacterium aquaticum

characteristic: organism

text: Phenylobacterium aquaticum

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-27: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiales bacterium

characteristic: project name

characteristic: sample derived from

text: Burkholderiales bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-3: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Moraxellaceae bacterium

characteristic: organism

text: Moraxellaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-30: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiaceae bacterium

characteristic: project name

text: Burkholderiaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-38: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-40: Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Cytophagaceae bacterium

characteristic: project name

text: Cytophagaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-42: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-46: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-49: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Chitinophagaceae bacterium

characteristic: organism

text: Chitinophagaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-50: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-51: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Burkholderiaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-52: Bacteria

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: bacterium

characteristic: project name

text: bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-53: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-54: Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Methylophilaceae; Methylotenera

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Methylophilaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Methylophilaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-55: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiales bacterium

characteristic: organism

text: Burkholderiales bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-56: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-58: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Flavobacteriaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Flavobacteriaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-59: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiales bacterium

characteristic: project name

text: Burkholderiales bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-61: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiaceae bacterium

characteristic: organism

text: Burkholderiaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-64: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Burkholderiaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-66: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiales bacterium

characteristic: organism

text: Burkholderiales bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-67: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-69: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-7: Bacteria; Proteobacteria; Oligoflexia; Bdellovibrionales

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Bdellovibrionales bacterium

characteristic: project name

text: Bdellovibrionales bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-71: Bacteria; Verrucomicrobia; Opitutae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Opitutae bacterium

characteristic: organism

text: Opitutae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-73: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Alcaligenaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Alcaligenaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-74: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-75: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Flavobacteriaceae bacterium

characteristic: project name

text: Flavobacteriaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-76: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiales bacterium

characteristic: organism

characteristic: sample derived from

text: Burkholderiales bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-77: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-78: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-83: Bacteria; Proteobacteria; Gammaproteobacteria

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Gammaproteobacteria bacterium

characteristic: project name

characteristic: sample derived from

text: Gammaproteobacteria bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-84: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiaceae bacterium

characteristic: organism

text: Burkholderiaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-86: Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobiaceae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Verrucomicrobiaceae bacterium

characteristic: project name

text: Verrucomicrobiaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-87: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Burkholderiaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-88: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Flavobacteriaceae bacterium

characteristic: project name

text: Flavobacteriaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-89: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Chitinophagaceae bacterium

characteristic: organism

text: Chitinophagaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-91: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiales bacterium

characteristic: project name

characteristic: sample derived from

text: Burkholderiales bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-92: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae; Flavipsychrobacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Flavipsychrobacter stenotrophus

characteristic: organism

text: Flavipsychrobacter stenotrophus

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-95: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

text: Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-E-240519-96: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Burkholderiaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-E-240519-98: Bacteria; Proteobacteria; Oligoflexia; Bacteriovoracales; Bacteriovoracaceae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Bacteriovoracaceae bacterium

characteristic: project name

text: Bacteriovoracaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-F-240519-101: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-F-240519-105: Bacteria; Proteobacteria; Oligoflexia; Bacteriovoracales; Bacteriovoracaceae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Bacteriovoracaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Bacteriovoracaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-F-240519-108: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Beijerinckiaceae bacterium

characteristic: organism

text: Beijerinckiaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-F-240519-109: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-F-240519-110: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-F-240519-111: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-F-240519-112: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Chitinophagaceae bacterium

characteristic: organism

text: Chitinophagaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-F-240519-114: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Beijerinckiaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Beijerinckiaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-F-240519-115: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Flavobacteriaceae bacterium

characteristic: organism

text: Flavobacteriaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-F-240519-116: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Alcaligenaceae bacterium

characteristic: project name

text: Alcaligenaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-F-240519-118: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Oxalobacteraceae bacterium

characteristic: organism

characteristic: sample derived from

text: Oxalobacteraceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-F-240519-119: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Flavobacteriaceae bacterium

characteristic: project name

text: Flavobacteriaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-F-240519-121: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Burkholderiaceae bacterium

characteristic: organism

text: Burkholderiaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-F-240519-123: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Alcaligenaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Alcaligenaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-F-240519-127: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae; Flavipsychrobacter

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Flavipsychrobacter stenotrophus

characteristic: organism

text: Flavipsychrobacter stenotrophus

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-F-240519-129: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-F-240519-131: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Chitinophagaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Chitinophagaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-F-240519-133: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-F-240519-134: Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Cytophagaceae bacterium

characteristic: organism

text: Cytophagaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-F-240519-135: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-F-240519-136: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-F-240519-138: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Flavobacteriaceae bacterium

characteristic: project name

text: Flavobacteriaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-F-240519-139: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Chitinophagaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Chitinophagaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-F-240519-14: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiales bacterium

characteristic: project name

text: Burkholderiales bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-F-240519-140: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Comamonadaceae bacterium

characteristic: organism

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-F-240519-141: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiales bacterium

characteristic: project name

characteristic: sample derived from

text: Burkholderiales bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-F-240519-142: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Alcaligenaceae bacterium

characteristic: organism

text: Alcaligenaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-F-240519-147: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

text: Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-F-240519-149: Bacteria; Proteobacteria; Oligoflexia; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Bdellovibrionaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Bdellovibrionaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-F-240519-15: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Oxalobacteraceae bacterium

characteristic: project name

text: Oxalobacteraceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-F-240519-18: Bacteria; Actinobacteria; Actinobacteria

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Actinobacteria bacterium

characteristic: organism

text: Actinobacteria bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-F-240519-19: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Comamonadaceae bacterium

text: multi-marker approach


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-F-240519-22: Bacteria; Actinobacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Rhodoluna

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Microbacteriaceae bacterium

characteristic: organism

text: Microbacteriaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-F-240519-29: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Burkholderiales bacterium

characteristic: project name

text: Burkholderiales bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-F-240519-3: Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Cytophagaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Cytophagaceae bacterium

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-F-240519-31: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Comamonadaceae bacterium

characteristic: project name

text: Comamonadaceae bacterium

text: multi-marker approach

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater ecosystem

characteristic: broad-scale environmental context

text: CheckM

text: JR-MC-F-240519-36: Bacteria; Actinobacteria; Actinobacteria

characteristic: description

text: mesocosm

text: Czech Republic

text: mesocosm experiment

text: mesocosm

text: aquatic metagenome

text: Actinobacteria bacterium

characteristic: organism

text: Actinobacteria bacterium

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MEGAHIT

text: coverage and kmer

text: freshwater ecosystem

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: JR-MC-F-240519-37: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae; Flavipsychrobacter

text: mesocosm

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm experiment

text: mesocosm

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Flavipsychrobacter stenotrophus

characteristic: project name

characteristic: sample derived from

text: Flavipsychrobacter stenotrophus

text: multi-marker approach