characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Tartu, Estonia

characteristic: INSDC last update

text: public

text: ena-upload-cli v0.6.1 @ Galaxy

text: University of Tartu KoroGenoEST3 consortium, Estonia

text: Aare Abroi, Radko Avi, Taavi Päll, Heiki Niglas , Merit Pauskar, Arina Shablinskaja, Eveli Kallas, Andrio Lahesaare, Kai Truusalu, Dagmar Hoidmets, Olga Sadikova, Kaspar Ratnik, Hanna Sepp, Liidia Dotsenko, Jevgenia Epštein, Heleene Suija, Katrin Kaarna, Lili Milani, Mait Metspalu, Ott Eric Oopkaup, Ivar Koppel, Erik Jaaniso, Ivan Kuzmin, Uku Raudvere, Tuuli Reisberg, Hedi Peterson, Ulvi Gerst Talas, Paul Naaber, Mari-Anne Härma, Irja Lutsar, Kristi Huik, Diana Pilvar

text: Nasopharyngeal/oropharyngeal swab from Estonian Covid-19 patient

characteristic: description

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Northern Estonia

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: isolate

characteristic: organism

text: PCR tiled amplicon WGS of SARS-Cov-2, monitoring random samples from active surveillance

characteristic: title


status: PUBLIC

tag: attribute

characteristic: External Id

text: University of Tartu, Estonia

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.6.1 @ Galaxy

tag: Namespace:University of Tartu, Estonia

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collector name

text: Estonia

unit: DD

text: North-Eastern Estonia

unit: year

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

characteristic: host subject id

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance not initiated by an outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Tartu, Estonia

characteristic: INSDC last update

text: public

text: ena-upload-cli v0.6.1 @ Galaxy

characteristic: description

text: Estonia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Southern Estonia

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female


characteristic: External Id

text: University of Tartu, Estonia

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.6.1 @ Galaxy

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collector name

text: Estonia

text: Southern Estonia

text: human

text: not provided

text: Homo sapiens

text: male

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Tartu, Estonia

characteristic: INSDC last update

text: public

text: ena-upload-cli v0.6.1 @ Galaxy

characteristic: description

text: Estonia

characteristic: geographic location (country and/or sea)

text: Central Estonia

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

characteristic: sample capture status


characteristic: External Id

text: University of Tartu, Estonia

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.6.1 @ Galaxy

characteristic: Submitter Id

text: Estonia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Western Estonia

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Tartu, Estonia

characteristic: INSDC last update

text: public

text: ena-upload-cli v0.6.1 @ Galaxy

characteristic: collecting institution

characteristic: collector name

characteristic: description

text: Estonia

characteristic: geographic location (country and/or sea)

text: Northern Estonia

text: human

text: not provided

text: Homo sapiens

text: male

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: External Id

text: University of Tartu, Estonia

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.6.1 @ Galaxy

characteristic: Submitter Id

text: Estonia

text: Western Estonia

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

characteristic: host subject id

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Tartu, Estonia

characteristic: INSDC last update

text: public

text: ena-upload-cli v0.6.1 @ Galaxy

characteristic: collecting institution

characteristic: collector name

text: Estonia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Central Estonia

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male


characteristic: External Id

text: University of Tartu, Estonia

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.6.1 @ Galaxy

characteristic: Submitter Id

characteristic: description

text: Estonia

characteristic: geographic location (country and/or sea)

text: human

text: not provided

text: Homo sapiens

text: male

characteristic: isolate

characteristic: organism

text: active surveillance in response to outbreak

text: PCR tiled amplicon WGS of SARS-Cov-2, pre-selected subset from active surveillance

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Tartu, Estonia

characteristic: INSDC last update

text: public

text: ena-upload-cli v0.6.1 @ Galaxy

characteristic: collecting institution

characteristic: collector name

text: Estonia

text: Northern Estonia

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

characteristic: host subject id

characteristic: sample capture status


characteristic: External Id

text: University of Tartu, Estonia

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.6.1 @ Galaxy

characteristic: Submitter Id

text: Estonia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Northern Estonia

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Tartu, Estonia

characteristic: INSDC last update

text: public

text: ena-upload-cli v0.6.1 @ Galaxy

characteristic: collecting institution

characteristic: collector name

characteristic: description

text: Estonia

characteristic: geographic location (country and/or sea)

text: Southern Estonia

text: human

text: not provided

text: Homo sapiens

text: female

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: External Id

text: University of Tartu, Estonia

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.6.1 @ Galaxy

characteristic: Submitter Id

text: Estonia

text: Western Estonia

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Tartu, Estonia

characteristic: INSDC last update

text: public

text: ena-upload-cli v0.6.1 @ Galaxy

characteristic: collecting institution

characteristic: collector name

text: Estonia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Southern Estonia

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male


characteristic: External Id

text: University of Tartu, Estonia

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.6.1 @ Galaxy

characteristic: Submitter Id

characteristic: description

text: Estonia

characteristic: geographic location (country and/or sea)

text: North-Eastern Estonia

text: human

text: not provided

text: Homo sapiens

text: male

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Tartu, Estonia

characteristic: INSDC last update

text: public

text: ena-upload-cli v0.6.1 @ Galaxy

characteristic: collecting institution

characteristic: collector name

text: Estonia

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

characteristic: host subject id

characteristic: sample capture status


characteristic: External Id

text: University of Tartu, Estonia

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-upload-cli v0.6.1 @ Galaxy

characteristic: Submitter Id

text: Estonia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Central Estonia

characteristic: geographic location (region and locality)

characteristic: host age

text: human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Nottingham

characteristic: INSDC last update

text: public

tag: Namespace:University of Nottingham

text: Contigs of all open reading frames in the genome of Zygosaccharomyces pseudobailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467659. Previous aliases include CIMSCEE 05.

characteristic: description

text: not collected

characteristic: geographic location (country and/or sea)

text: not collected

text: Zygosaccharomyces pseudobailii

characteristic: organism

text: Zygosaccharomyces pseudobailii

characteristic: title


characteristic: External Id

text: University of Nottingham

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces pseudobailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467659. Previous aliases include CIMSCEE 639.

text: not collected

text: not collected

text: Zygosaccharomyces pseudobailii

text: Zygosaccharomyces pseudobailii


text: University of Nottingham

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658.

text: USA

text: Canned fruit

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Italy

text: Sauce

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: not collected

text: Vinigrette

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces pseudobailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467659.

text: not collected

text: Ketchup

text: Zygosaccharomyces pseudobailii

text: Zygosaccharomyces pseudobailii


text: University of Nottingham

text: public

text: not collected

text: not collected

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Russia

text: Ketchup

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces bailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467660.

text: not collected

text: Kombucha

text: Zygosaccharomyces bailii

text: Zygosaccharomyces bailii


text: University of Nottingham

text: public

text: not collected

text: Onion

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: not collected

text: Low-fat tartare sauce

text: Zygosaccharomyces pseudobailii

text: Zygosaccharomyces pseudobailii


text: University of Nottingham

text: public

text: not collected

text: Chow chow

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: not collected

text: Creamy ceasar dressing

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: not collected

text: Pickles

text: Zygosaccharomyces pseudobailii

text: Zygosaccharomyces pseudobailii


text: University of Nottingham

text: public

text: not collected

text: vinaigrette olive/citron

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Czech Republic

text: Ketchup curry

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658.Was assigned strain number 119 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: Netherlands

text: not collected

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include NCYC 2932.

text: United Kingdom

text: Ketchup

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: not collected

text: Yoghurt mayonnaise

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: not collected

text: Ice Tea concentrate

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include CMCC 3474, NCYC 1766.

text: United Kingdom

text: Blackcurrant & grape juice

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: not collected

text: 1000 Islands dressing

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include CFT -1. Was assigned strain number 4 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: USA

text: Canned tea

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658.Was assigned strain number 108 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: United Kingdom

text: Tomato based pruduct

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include KL 1522. Was assigned strain number 106 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: United Kingdom

text: Tomato based pruduct

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: not collected

text: Herring in tomato sauce

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Nigeria

text: Ice tea production environment

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Mexico

text: Ice tea production environment

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Netherlands

text: Mayonnaise

text: Zygosaccharomyces pseudobailii

text: Zygosaccharomyces pseudobailii


text: University of Nottingham

text: public

text: Philippines

text: Mayonnaise

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: not collected

text: Spoiled Vinaigrette

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Germany

text: Ice tea concentrate

text: Zygosaccharomyces bailii

text: Zygosaccharomyces bailii


text: University of Nottingham

text: public

text: Portugal

text: Ice tea concentrate

text: Zygosaccharomyces bailii

text: Zygosaccharomyces bailii


text: University of Nottingham

text: public

text: Poland

text: Tartare Sauce

text: Zygosaccharomyces pseudobailii

text: Zygosaccharomyces pseudobailii


text: University of Nottingham

text: public

text: Portugal

text: Concentrate dispensing system

text: Zygosaccharomyces bailii

text: Zygosaccharomyces bailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces bailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467660. Previous aliases include CECT11931.

text: not collected

text: Juice, lees of pear must

text: Zygosaccharomyces bailii

text: Zygosaccharomyces bailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include MUCL 28823.

text: Netherlands

text: Apple juice

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces pseudobailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467659. Previous aliases include DBVPG 6451.

text: not collected

text: not collected

text: Zygosaccharomyces pseudobailii

text: Zygosaccharomyces pseudobailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include DBVPG 6378.

text: Netherlands

text: Mayonnaise

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: not collected

text: not collected

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include DBVPG 6454.

text: Netherlands

text: not collected

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces bailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467660. Previous aliases include DBVPG 6456.

text: Italy

text: Juice

text: Zygosaccharomyces bailii

text: Zygosaccharomyces bailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces bailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467660. Previous aliases include CECT11922.

text: Brazil

text: Orange-juice concentrate

text: Zygosaccharomyces bailii

text: Zygosaccharomyces bailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include CCRC 22630.

text: not collected

text: Honey

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces pseudobailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467659. Previous aliases include CIMSCEE 639.

text: not collected

text: not collected

text: Zygosaccharomyces pseudobailii

text: Zygosaccharomyces pseudobailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces pseudobailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467659. Previous aliases include CIMSCEE 05.

text: not collected

text: not collected

text: Zygosaccharomyces pseudobailii

text: Zygosaccharomyces pseudobailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces bailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467660. Previous aliases include BRAS 749.

text: Poland

text: not collected

text: Zygosaccharomyces bailii

text: Zygosaccharomyces bailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces bailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467660.

text: Democratic Republic of the Congo

text: orange wine

text: Zygosaccharomyces bailii

text: Zygosaccharomyces bailii


text: University of Nottingham

text: public

text: not collected

text: fermented tea

text: Zygosaccharomyces bailii

text: Zygosaccharomyces bailii


text: University of Nottingham

text: public

text: Italy

text: sweet wine

text: Zygosaccharomyces bailii

text: Zygosaccharomyces bailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658.

text: not collected

text: alcoholic fermented beverage

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include ATCC MYA-4549.

text: not collected

text: not collected

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces pseudobailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467659. Previous aliases include NCYC 563c. Was assigned strain number 2 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: United Kingdom

text: Sorghum brandy mash

text: Zygosaccharomyces pseudobailii

text: Zygosaccharomyces pseudobailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include CFT1. Was assigned strain number 4 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: USA

text: Canned ice tea

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include CFT-10. Was assigned strain number 5 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: USA

text: Canned fruit

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658.Was assigned strain number 6 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: USA

text: Bottled ice tea

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658.Was assigned strain number 8 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: USA

text: Ice tea

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658.Was assigned strain number 9 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: USA

text: Carbonated soft drink

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658.Was assigned strain number 10 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: USA

text: Ice tea

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658.Was assigned strain number 11 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: USA

text: Ice tea

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658.Was assigned strain number 12 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: USA

text: Soft drink

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces pseudobailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467659. Previous aliases include CMCC 3299. Was assigned strain number 15 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: Netherlands

text: Salad dressing

text: Zygosaccharomyces pseudobailii

text: Zygosaccharomyces pseudobailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include NCYC 3410, CMCC 2959. Was assigned strain number 18 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: United Kingdom

text: Herring in tomato sauce

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include NCYC 3407, CMCC 2589. Was assigned strain number 19 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: United Kingdom

text: Spoiled soft drink (lemon tea)

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include NCYC 3414, CMCC 2968. Was assigned strain number 20 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: United Kingdom

text: Orange juice concentrate

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include CMCC 2960. Was assigned strain number 21 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: United Kingdom

text: Herring in tomato sauce

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include CMCC 3229. Was assigned strain number 80 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: United Kingdom

text: Mexican Topping sauce

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include NCYC 2933, CMCC3630. Was assigned strain number 105 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: United Kingdom

text: Ketchup

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658.Was assigned strain number 106 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: United Kingdom

text: Ketchup

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include KL 1750, NCYC 2932. Was assigned strain number 107 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: United Kingdom

text: Ketchup

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include KL 2436, NCYC 2931. Was assigned strain number 108 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: United Kingdom

text: Ketchup

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658.Was assigned strain number 112 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: Belgium

text: Ice tea

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658.Was assigned strain number 114 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: Belgium

text: Ice tea

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include NCYC 2927. Was assigned strain number 119 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: Netherlands

text: Soft drink

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces pseudobailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467659. Previous aliases include DBVPG 6924. Was assigned strain number 194 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: China

text: Honey

text: Zygosaccharomyces pseudobailii

text: Zygosaccharomyces pseudobailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658.Was assigned strain number 280 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: South Africa

text: Ice Tea

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658.Was assigned strain number 362 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: Turkey

text: Factory isolate

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658.Was assigned strain number 475 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: Brazil

text: Factory isolate

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces bailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467660. Previous aliases include NCYC 3302. Was assigned strain number 503 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: United Kingdom

text: Kombucha

text: Zygosaccharomyces bailii

text: Zygosaccharomyces bailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces bailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467660. Previous aliases include NCYC 3307. Was assigned strain number 505 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: United Kingdom

text: Kombucha

text: Zygosaccharomyces bailii

text: Zygosaccharomyces bailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include NCYC 3378. Was assigned strain number 593 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: Philippines

text: Syrup room, Soft Drinks factory

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces bailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467660. Previous aliases include NCYC 3379. Was assigned strain number 594 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: Philippines

text: Factory isolate

text: Zygosaccharomyces bailii

text: Zygosaccharomyces bailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658.Was assigned strain number 595 by Stratford et al. DOI: https://doi.org/10.3389/fmicb.2018.03238.

text: Spain

text: Dried fruit

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces bailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467660. Previous aliases include NCYC 1416, ATCC 58445.

text: Japan

text: Brewery

text: Zygosaccharomyces bailii

text: Zygosaccharomyces bailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include NCYC 1766.

text: United Kingdom

text: Grape and blackcurrant juice drink

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces pseudobailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467659.

text: not collected

text: not collected

text: Zygosaccharomyces pseudobailii

text: Zygosaccharomyces pseudobailii


text: University of Nottingham

text: public

text: not collected

text: Sweet pickle

text: Zygosaccharomyces pseudobailii

text: Zygosaccharomyces pseudobailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces bailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467660. Previous aliases include ATCC 8766, CBS 749.

text: USA

text: Sour red wine

text: Zygosaccharomyces bailii

text: Zygosaccharomyces bailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include ATCC 8099.

text: not collected

text: not collected

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658.

text: not collected

text: not collected

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces pseudobailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467659. Previous aliases include ATCC 56074, CBS 2856.

text: not collected

text: Worcester sauce

text: Zygosaccharomyces pseudobailii

text: Zygosaccharomyces pseudobailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include NRRL Y-7255.

text: not collected

text: Salad Cream

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include NRRL Y-7254.

text: not collected

text: Salad Cream

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include NRRL Y-7256.

text: not collected

text: Salad Cream

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include NRRL Y-11865.

text: not collected

text: Salad Cream

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: not collected

text: Anthocyanin Liquid from Grape skins

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces pseudobailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467659. Previous aliases include ATCC 10685, CBS 684.

text: not collected

text: Honey

text: Zygosaccharomyces pseudobailii

text: Zygosaccharomyces pseudobailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces bailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467660. Previous aliases include DBVPG 4426.

text: not collected

text: Wine or grape must

text: Zygosaccharomyces bailii

text: Zygosaccharomyces bailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include DBVPG 4429.

text: not collected

text: Wine or grape must

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces parabailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467658. Previous aliases include DBVPG 4433.

text: not collected

text: not collected

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Contigs of all open reading frames in the genome of Zygosaccharomyces bailii strain isolated from food supply chain environment. Contigs were produced by alligning Illumia short reads to de novo reference genome SAMEA112467660.

text: Germany

text: Kombucha tea

text: Zygosaccharomyces bailii

text: Zygosaccharomyces bailii


text: University of Nottingham

text: public

text: Belgium

text: not collected

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Guatemala

text: Ice Tea concentrate

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Czech Republic

text: Spoiled Dressing

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: University of Nottingham

text: public

text: Czech Republic

text: Yoghurt Dressing sachet

text: Zygosaccharomyces parabailii

text: Zygosaccharomyces parabailii


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: hCoV-19/Ireland/CE-NVRL-S23IRL00006082/2023

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cavan

characteristic: host age

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CN-NVRL-S23IRL00006310/2023

characteristic: title


text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/CN-NVRL-S23IRL00006239/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cavan

characteristic: host age

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/CN-NVRL-S23IRL00006897/2023

characteristic: virus identifier


text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/CN-NVRL-S23IRL00004913/2023

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Cork

characteristic: host age

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S23IRL00006086/2023


text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/D-NVRL-S23IRL00006148/2023

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S23IRL00006149/2023

characteristic: title


text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S23IRL00006155/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S23IRL00006272/2023

characteristic: virus identifier


text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/D-NVRL-S23IRL00006157/2023

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S23IRL00006213/2023


text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

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text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/D-NVRL-S23IRL00006209/2023

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S23IRL00006208/2023

characteristic: title


text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S23IRL00006274/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: active surveillance in response to outbreak

text: hCoV-19/Ireland/D-NVRL-S23IRL00006246/2023

characteristic: virus identifier


text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/D-NVRL-S23IRL00006393/2023

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S23IRL00006401/2023


text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/D-NVRL-S23IRL00006468/2023

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S23IRL00006508/2023

characteristic: title


text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S23IRL00006375/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S23IRL00006372/2023

characteristic: virus identifier


text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/D-NVRL-S23IRL00006380/2023

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S23IRL00006646/2023


text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/D-NVRL-S23IRL00006660/2023

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S23IRL00006698/2023

characteristic: title


text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S23IRL00006679/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S23IRL00006885/2023

characteristic: virus identifier


text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/D-NVRL-S23IRL00006694/2023

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S23IRL00006645/2023


text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: active surveillance in response to outbreak

text: hCoV-19/Ireland/D-NVRL-S23IRL00006749/2023

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S23IRL00006794/2023

characteristic: title


text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S23IRL00006789/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S23IRL00006935/2023

characteristic: virus identifier


text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/D-NVRL-S23IRL00006940/2023

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Dublin

characteristic: host age

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S23IRL00006788/2023


text: NVRL

text: public

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: hCoV-19/Ireland/D-NVRL-S23IRL00006932/2023

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

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text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

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