characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: The integrated mouse gut metagenome catalog (iMGMC), comprising 4.6 million unique genes and 660 high-quality metagenome-assembled genomes (MAGs) linked to reconstructed full-length 16S rRNA gene sequences

characteristic: sample derived from

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1231.24_1675168219


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run ERR3357626 of study ERP115625.

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

unit: DD

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Lachnospiraceae bacterium

characteristic: organism

characteristic: project name

text: Lachnospiraceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1231.25_1675168220

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1231.27_1675168220


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Lactobacillus taiwanensis

characteristic: organism

characteristic: project name

text: Lactobacillus taiwanensis

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1231.28_1675168220

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Candidatus Saccharibacteria bacterium

characteristic: sample derived from

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1231.30_1675168221


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Hungatella sp.

characteristic: organism

characteristic: project name

text: uncultured Hungatella sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1231.33_1675168224

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroides sp.

characteristic: sample derived from

text: uncultured Bacteroides sp.

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1231.34_1675168224


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Muribaculaceae bacterium

characteristic: organism

characteristic: project name

text: Muribaculaceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1231.36_1675168224

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1231.37_1675168225


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Odoribacter sp.

characteristic: organism

characteristic: project name

text: uncultured Odoribacter sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1231.38_1675168226

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Bacteroidales bacterium

characteristic: sample derived from

text: Bacteroidales bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1231.41_1675168226


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Lachnospiraceae bacterium

characteristic: organism

characteristic: project name

text: Lachnospiraceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1231.45_1675168226

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Christensenella sp.

characteristic: sample derived from

text: uncultured Christensenella sp.

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1231.47_1675168226


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Christensenella sp.

characteristic: organism

text: The integrated mouse gut metagenome catalog (iMGMC), comprising 4.6 million unique genes and 660 high-quality metagenome-assembled genomes (MAGs) linked to reconstructed full-length 16S rRNA gene sequences

characteristic: project name

text: uncultured Christensenella sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1231.49_1675168227

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1231.50_1675168227


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run ERR3357626 of study ERP115625.

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Acetatifactor sp.

characteristic: organism

characteristic: project name

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1231.53_1675168227

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Bacteroidales bacterium

characteristic: sample derived from

text: Bacteroidales bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1231.54_1675168227


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

characteristic: project name

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1231.56_1675168228

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Mycoplasmatales bacterium

characteristic: sample derived from

text: uncultured Mycoplasmatales bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1231.62_1675168228


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Duncaniella freteri

characteristic: organism

characteristic: project name

text: Duncaniella freteri

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1231.63_1675168228

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Lachnospiraceae bacterium

characteristic: sample derived from

text: Lachnospiraceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1231.65_1675168229


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Rikenella sp.

characteristic: organism

characteristic: project name

text: uncultured Rikenella sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1231.66_1675168229

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Lachnospiraceae bacterium

characteristic: sample derived from

text: Lachnospiraceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1231.74_1675168229


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Helicobacter hepaticus ATCC 51449

characteristic: organism

characteristic: project name

text: Helicobacter hepaticus ATCC 51449

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1231.76_1675168229

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Acetatifactor sp.

characteristic: sample derived from

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1231.78_1675168230


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Mucispirillum schaedleri ASF457

characteristic: organism

characteristic: project name

text: Mucispirillum schaedleri ASF457

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1231.80_1675168230

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Porphyromonadaceae bacterium UBA7043

characteristic: sample derived from

text: Porphyromonadaceae bacterium UBA7043

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1231.91_1675168230


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: bacterium 1xD42-87

characteristic: organism

text: The integrated mouse gut metagenome catalog (iMGMC), comprising 4.6 million unique genes and 660 high-quality metagenome-assembled genomes (MAGs) linked to reconstructed full-length 16S rRNA gene sequences

characteristic: project name

text: bacterium 1xD42-87

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1231.92_1675168231

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Vampirovibrio sp.

characteristic: sample derived from

text: uncultured Vampirovibrio sp.

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1231.93_1675168231


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run ERR3357626 of study ERP115625.

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Alistipes sp. UBA6068

characteristic: organism

characteristic: project name

text: Alistipes sp. UBA6068

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1231.95_1675168231

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Porphyromonadaceae bacterium UBA7145

characteristic: sample derived from

text: Porphyromonadaceae bacterium UBA7145

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1231.96_1675168233


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Porphyromonadaceae bacterium UBA3317

characteristic: organism

characteristic: project name

text: Porphyromonadaceae bacterium UBA3317

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1231.97_1675168233

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1231.98_1675168233


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run ERR3357627 of study ERP115625.

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Prevotella sp. UBA7115

characteristic: organism

characteristic: project name

text: Prevotella sp. UBA7115

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1232.1_1675168234

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Tenericutes bacterium

characteristic: sample derived from

text: uncultured Tenericutes bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1232.2_1675168234


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

characteristic: project name

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1232.3_1675168236

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Alistipes sp.

characteristic: sample derived from

text: uncultured Alistipes sp.

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1232.5_1675168236


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Limosilactobacillus reuteri

characteristic: organism

characteristic: project name

text: Limosilactobacillus reuteri

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1232.10_1675168238

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Muribaculaceae bacterium

characteristic: sample derived from

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1232.13_1675168238


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Porphyromonadaceae bacterium UBA7222

characteristic: organism

characteristic: project name

text: Porphyromonadaceae bacterium UBA7222

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1232.15_1675168239

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Alistipes sp.

text: The integrated mouse gut metagenome catalog (iMGMC), comprising 4.6 million unique genes and 660 high-quality metagenome-assembled genomes (MAGs) linked to reconstructed full-length 16S rRNA gene sequences

characteristic: sample derived from

text: uncultured Alistipes sp.

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1232.17_1675168239


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Duncaniella freteri

characteristic: organism

characteristic: project name

text: Duncaniella freteri

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1232.20_1675168239

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1232.22_1675168239


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

characteristic: project name

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1232.25_1675168240

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Muribaculaceae bacterium

characteristic: sample derived from

text: Muribaculaceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1232.28_1675168240


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Prevotella sp.

characteristic: organism

characteristic: project name

text: uncultured Prevotella sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1232.31_1675168240

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Muribaculaceae bacterium

characteristic: sample derived from

text: Muribaculaceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1232.32_1675168241


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run ERR3357627 of study ERP115625.

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Christensenella sp.

characteristic: organism

characteristic: project name

text: uncultured Christensenella sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1232.33_1675168241

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Dorea sp.

characteristic: sample derived from

text: uncultured Dorea sp.

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1232.37_1675168241


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: bacterium 1xD42-67

characteristic: organism

characteristic: project name

text: bacterium 1xD42-67

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1232.42_1675168241

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Porphyromonadaceae bacterium UBA3317

characteristic: sample derived from

text: Porphyromonadaceae bacterium UBA3317

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1232.44_1675168242


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Muribaculaceae bacterium

characteristic: organism

characteristic: project name

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1232.45_1675168242

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Anaeroplasmataceae bacterium

characteristic: sample derived from

text: uncultured Anaeroplasmataceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1232.46_1675168242


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Lachnospiraceae bacterium

characteristic: organism

characteristic: project name

text: Lachnospiraceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1232.47_1675168243

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Muribaculaceae bacterium

text: The integrated mouse gut metagenome catalog (iMGMC), comprising 4.6 million unique genes and 660 high-quality metagenome-assembled genomes (MAGs) linked to reconstructed full-length 16S rRNA gene sequences

characteristic: sample derived from

text: Muribaculaceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1232.48_1675168243


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Helicobacter typhlonius

characteristic: organism

characteristic: project name

text: Helicobacter typhlonius

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1232.50_1675168243

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Bacteroidales bacterium

characteristic: sample derived from

text: Bacteroidales bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1232.52_1675168243


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Christensenella sp.

characteristic: organism

characteristic: project name

text: uncultured Christensenella sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1232.55_1675168244

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Muribaculaceae bacterium

characteristic: sample derived from

text: Muribaculaceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1232.56_1675168244


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

characteristic: project name

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1232.58_1675168244

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Helicobacter apodemus

characteristic: sample derived from

text: Helicobacter apodemus

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1232.62_1675168245


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run ERR3357627 of study ERP115625.

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Mucispirillum schaedleri ASF457

characteristic: organism

characteristic: project name

text: Mucispirillum schaedleri ASF457

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1232.63_1675168245

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Porphyromonadaceae bacterium UBA7145

characteristic: sample derived from

text: Porphyromonadaceae bacterium UBA7145

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1232.64_1675168245


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Bacteroidales bacterium M1

characteristic: organism

characteristic: project name

text: Bacteroidales bacterium M1

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1232.65_1675168246

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Alistipes sp.

characteristic: sample derived from

text: uncultured Alistipes sp.

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1232.67_1675168246


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Mailhella sp.

characteristic: organism

characteristic: project name

text: uncultured Mailhella sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1232.71_1675168248

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Rikenella sp.

characteristic: sample derived from

text: uncultured Rikenella sp.

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1232.76_1675168248


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Odoribacter sp.

characteristic: organism

characteristic: project name

text: uncultured Odoribacter sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1232.77_1675168248

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Odoribacter sp.

text: The integrated mouse gut metagenome catalog (iMGMC), comprising 4.6 million unique genes and 660 high-quality metagenome-assembled genomes (MAGs) linked to reconstructed full-length 16S rRNA gene sequences

characteristic: sample derived from

text: uncultured Odoribacter sp.

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1232.78_1675168248


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Muribaculaceae bacterium

characteristic: organism

characteristic: project name

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1232.84_1675168249

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1232.85_1675168249


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Oscillibacter sp.

characteristic: organism

characteristic: project name

text: uncultured Oscillibacter sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1232.89_1675168249

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Christensenellaceae bacterium

characteristic: sample derived from

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1232.95_1675168250


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

characteristic: project name

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1232.97_1675168250

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run ERR3357627 of study ERP115625.

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Porphyromonadaceae bacterium UBA3276

characteristic: sample derived from

text: Porphyromonadaceae bacterium UBA3276

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1232.98_1675168251


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Christensenella sp.

characteristic: organism

characteristic: project name

text: uncultured Christensenella sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1232.110_1675168251

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Muribaculaceae bacterium Isolate-043 (Harlan)

characteristic: sample derived from

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1232.113_1675168251


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Helicobacter sp. UBA3407

characteristic: organism

characteristic: project name

text: Helicobacter sp. UBA3407

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1232.116_1675168251

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run ERR3357628 of study ERP115625.

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Muribaculaceae bacterium

characteristic: sample derived from

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1233.1_1675168252


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Lachnospiraceae bacterium

characteristic: organism

text: The integrated mouse gut metagenome catalog (iMGMC), comprising 4.6 million unique genes and 660 high-quality metagenome-assembled genomes (MAGs) linked to reconstructed full-length 16S rRNA gene sequences

characteristic: project name

text: Lachnospiraceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1233.2_1675168252

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Acetatifactor sp.

characteristic: sample derived from

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1233.4_1675168252


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

text: mouse digestive system

text: not provided

text: CheckM

text: feces

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Parabacteroides sp.

characteristic: organism

characteristic: project name

text: uncultured Parabacteroides sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: single-wildmice_C1233.6_1675168253

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

text: not provided

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Muribaculaceae bacterium

characteristic: sample derived from

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: single-wildmice_C1233.7_1675168253