characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Ignavibacteria bacterium

characteristic: project name

text: uncultured Ignavibacteria bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576002_bin.35_CONCOCT_v1.1_MAG


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR5576002 of study SRP107338.

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

unit: DD

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Chloroflexi bacterium

characteristic: organism

text: This project focus on a Denitrifying Candidatus Accumulibacter enrichment culture that we’ve shown to be capable of producing substantial nitrous oxide when nitrite is present as the electron acceptor for denitrification. Shotgun metagenomic sequencing and genome-resolved metagenome analysis were applied to investigate the genomic nitrogen transformation potential for two Accumulibacter genomes as well as flanking bacterial genomes.

characteristic: sample derived from

text: uncultured Chloroflexi bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576002_bin.39_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Verrucomicrobia bacterium

characteristic: project name

text: uncultured Verrucomicrobia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576002_bin.46_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576002_bin.5_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Chthonomonas sp.

characteristic: project name

text: uncultured Chthonomonas sp.

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576002_bin.69_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Prosthecobacter sp.

characteristic: organism

characteristic: sample derived from

text: uncultured Prosthecobacter sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576002_bin.71_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Elusimicrobia bacterium

characteristic: project name

text: uncultured Elusimicrobia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576002_bin.82_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Holophagaceae bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Holophagaceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576002_bin.91_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Ignavibacteria bacterium

characteristic: project name

text: uncultured Ignavibacteria bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576002_bin.97_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR5576003 of study SRP107338.

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Alphaproteobacteria bacterium

characteristic: organism

characteristic: sample derived from

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576003_bin.1_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Polaromonas sp.

characteristic: project name

text: uncultured Polaromonas sp.

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576003_bin.12_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Propionibacteriaceae bacterium

characteristic: organism

characteristic: sample derived from

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576003_bin.24_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Tetrasphaera sp.

text: This project focus on a Denitrifying Candidatus Accumulibacter enrichment culture that we’ve shown to be capable of producing substantial nitrous oxide when nitrite is present as the electron acceptor for denitrification. Shotgun metagenomic sequencing and genome-resolved metagenome analysis were applied to investigate the genomic nitrogen transformation potential for two Accumulibacter genomes as well as flanking bacterial genomes.

characteristic: project name

text: uncultured Tetrasphaera sp.

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576003_bin.4_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Gemmatimonadetes bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Gemmatimonadetes bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576003_bin.53_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Methylotenera sp.

characteristic: project name

text: uncultured Methylotenera sp.

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576003_bin.60_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Thiotrichaceae bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Thiotrichaceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576003_bin.7_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR5576004 of study SRP107338.

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Verrucomicrobiaceae bacterium

characteristic: project name

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576004_bin.104_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Verrucomicrobiae bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Verrucomicrobiae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576004_bin.105_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Chitinophagaceae bacterium

characteristic: project name

text: uncultured Chitinophagaceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576004_bin.106_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Anaerolineales bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Anaerolineales bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576004_bin.107_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: Brevundimonas aveniformis

characteristic: project name

text: Brevundimonas aveniformis

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576004_bin.114_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Ignavibacteria bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Ignavibacteria bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576004_bin.118_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Ignavibacteria bacterium

characteristic: project name

text: uncultured Ignavibacteria bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576004_bin.128_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Fusibacter sp.

characteristic: organism

characteristic: sample derived from

text: uncultured Fusibacter sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576004_bin.145_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Anaerolineales bacterium

characteristic: project name

text: uncultured Anaerolineales bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576004_bin.154_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Alphaproteobacteria bacterium

characteristic: organism

text: This project focus on a Denitrifying Candidatus Accumulibacter enrichment culture that we’ve shown to be capable of producing substantial nitrous oxide when nitrite is present as the electron acceptor for denitrification. Shotgun metagenomic sequencing and genome-resolved metagenome analysis were applied to investigate the genomic nitrogen transformation potential for two Accumulibacter genomes as well as flanking bacterial genomes.

characteristic: sample derived from

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576004_bin.159_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: project name

text: uncultured bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576004_bin.164_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Ignavibacteria bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Ignavibacteria bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576004_bin.172_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR5576004 of study SRP107338.

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

characteristic: project name

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576004_bin.20_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Mesorhizobium sp.

characteristic: organism

characteristic: sample derived from

text: uncultured Mesorhizobium sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576004_bin.24_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: project name

text: uncultured bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576004_bin.38_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576004_bin.40_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Chthonomonas sp.

characteristic: project name

text: uncultured Chthonomonas sp.

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576004_bin.48_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Bacteroidetes bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Bacteroidetes bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576004_bin.50_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Chitinophagaceae bacterium

characteristic: project name

text: uncultured Chitinophagaceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576004_bin.58_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Chloroflexi bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Chloroflexi bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576004_bin.64_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Anaerolineales bacterium

characteristic: project name

text: uncultured Anaerolineales bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576004_bin.85_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Chloracidobacterium sp.

characteristic: organism

characteristic: sample derived from

text: uncultured Chloracidobacterium sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576004_bin.87_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Alphaproteobacteria bacterium

text: This project focus on a Denitrifying Candidatus Accumulibacter enrichment culture that we’ve shown to be capable of producing substantial nitrous oxide when nitrite is present as the electron acceptor for denitrification. Shotgun metagenomic sequencing and genome-resolved metagenome analysis were applied to investigate the genomic nitrogen transformation potential for two Accumulibacter genomes as well as flanking bacterial genomes.

characteristic: project name

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576004_bin.9_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR5576005 of study SRP107338.

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Anaerolineales bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Anaerolineales bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576005_bin.10_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Bacteroidetes bacterium

characteristic: project name

text: uncultured Bacteroidetes bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576005_bin.105_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Chloroflexi bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Chloroflexi bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576005_bin.115_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Candidatus Berkelbacteria bacterium

characteristic: project name

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576005_bin.117_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Bacteroidetes bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Bacteroidetes bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576005_bin.119_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Gammaproteobacteria bacterium

characteristic: project name

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576005_bin.140_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: Flavobacterium filum

characteristic: organism

characteristic: sample derived from

text: Flavobacterium filum

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576005_bin.162_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: Candidatus Accumulibacter phosphatis

characteristic: project name

text: Candidatus Accumulibacter phosphatis

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576005_bin.163_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Planctomycetaceae bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Planctomycetaceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576005_bin.169_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured proteobacterium

characteristic: project name

text: uncultured proteobacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576005_bin.170_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Chloroflexi bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Chloroflexi bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576005_bin.25_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured proteobacterium

text: This project focus on a Denitrifying Candidatus Accumulibacter enrichment culture that we’ve shown to be capable of producing substantial nitrous oxide when nitrite is present as the electron acceptor for denitrification. Shotgun metagenomic sequencing and genome-resolved metagenome analysis were applied to investigate the genomic nitrogen transformation potential for two Accumulibacter genomes as well as flanking bacterial genomes.

characteristic: project name

text: uncultured proteobacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576005_bin.3_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR5576005 of study SRP107338.

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Verrucomicrobia bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Verrucomicrobia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576005_bin.32_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Verrucomicrobia bacterium

characteristic: project name

text: uncultured Verrucomicrobia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5576005_bin.86_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Bacteroidetes bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Bacteroidetes bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5576005_bin.93_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR5894287 of study SRP114798.

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured bacterium

text: Metabolic interactions and genetic exchange are important features of microbial communities. We performed genome-resolved metagenomics to characterize communities performing dissimilatory perchlorate reduction, a metabolism that involves reactive chlorine species and horizontal gene transfer of a conserved functional gene cluster. Distinct communities from source marine sediment and enrichments of varying salinity were recovered, and enriched populations included perchlorate-reducing bacteria as well as putative interacting populations of chlorate-reducing, sulfur-reducing, and fermentative microorganisms. Vectors for perchlorate reduction genes and a novel gene cluster involved in perchlorate reduction were also identified.

characteristic: project name

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5894287_bin.12_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Ignavibacteriales bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Ignavibacteriales bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5894287_bin.34_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Arcobacter sp.

characteristic: project name

text: uncultured Arcobacter sp.

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5894287_bin.36_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Sedimenticola sp.

characteristic: organism

characteristic: sample derived from

text: uncultured Sedimenticola sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5894287_bin.42_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: project name

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5894287_bin.59_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Desulfobulbaceae bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Desulfobulbaceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5894287_bin.6_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: Vibrio diabolicus

characteristic: project name

text: Vibrio diabolicus

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5894287_bin.60_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Marinilabiliales bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Marinilabiliales bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5894287_bin.63_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Ignavibacteria bacterium

characteristic: project name

text: uncultured Ignavibacteria bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5894287_bin.64_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Marinilabiliales bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Marinilabiliales bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5894287_bin.66_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Desulfuromonas sp.

characteristic: project name

text: uncultured Desulfuromonas sp.

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5894287_bin.68_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Desulfuromonas sp.

characteristic: organism

characteristic: sample derived from

text: uncultured Desulfuromonas sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5894287_bin.69_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Marinilabiliales bacterium

characteristic: project name

text: uncultured Marinilabiliales bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5894287_bin.70_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Alphaproteobacteria bacterium

characteristic: organism

characteristic: sample derived from

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5894287_bin.75_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR5894287 of study SRP114798.

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured bacterium

text: Metabolic interactions and genetic exchange are important features of microbial communities. We performed genome-resolved metagenomics to characterize communities performing dissimilatory perchlorate reduction, a metabolism that involves reactive chlorine species and horizontal gene transfer of a conserved functional gene cluster. Distinct communities from source marine sediment and enrichments of varying salinity were recovered, and enriched populations included perchlorate-reducing bacteria as well as putative interacting populations of chlorate-reducing, sulfur-reducing, and fermentative microorganisms. Vectors for perchlorate reduction genes and a novel gene cluster involved in perchlorate reduction were also identified.

characteristic: project name

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5894287_bin.77_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5894287_bin.78_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: project name

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5894287_bin.79_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: USA

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Marinilabiliales bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Marinilabiliales bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR5894287_bin.86_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

characteristic: project name

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR5894287_bin.9_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR6007444 of study SRP116833.

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: not provided

text: not provided

text: not provided

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured bacterium

characteristic: organism

text: we examined CIP removal and biodegradation using a sulfate-reducing upflow sludge bed (SRUSB) reactor during long-term operation. The ARGs in SRB sludge samples were also examined based on the high-throughput sequencing technique, to elucidate the possible degradation mechanism of CIP in the SRB sludge system based on the change in ARGs.

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 3000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR6007444_bin.0_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Bacillales bacterium

characteristic: project name

text: uncultured Bacillales bacterium

text: Illumina HiSeq 3000

text: multi-marker approach

text: Metagenome-assembled genome: SRR6007444_bin.100_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: not provided

text: not provided

text: not provided

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Bacillales bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Bacillales bacterium

text: Illumina HiSeq 3000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR6007444_bin.106_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Anaerolineae bacterium

characteristic: project name

text: uncultured Anaerolineae bacterium

text: Illumina HiSeq 3000

text: multi-marker approach

text: Metagenome-assembled genome: SRR6007444_bin.113_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: not provided

text: not provided

text: not provided

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Myxococcales bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Myxococcales bacterium

text: Illumina HiSeq 3000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR6007444_bin.12_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: project name

text: uncultured Clostridia bacterium

text: Illumina HiSeq 3000

text: multi-marker approach

text: Metagenome-assembled genome: SRR6007444_bin.126_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: not provided

text: not provided

text: not provided

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured proteobacterium

characteristic: organism

characteristic: sample derived from

text: uncultured proteobacterium

text: Illumina HiSeq 3000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR6007444_bin.134_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Armatimonadetes bacterium

characteristic: project name

text: uncultured Armatimonadetes bacterium

text: Illumina HiSeq 3000

text: multi-marker approach

text: Metagenome-assembled genome: SRR6007444_bin.137_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: not provided

text: not provided

text: not provided

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Verrucomicrobia bacterium

characteristic: organism

characteristic: sample derived from

text: uncultured Verrucomicrobia bacterium

text: Illumina HiSeq 3000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR6007444_bin.146_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured Spirochaetaceae bacterium

characteristic: project name

text: uncultured Spirochaetaceae bacterium

text: Illumina HiSeq 3000

text: multi-marker approach

text: Metagenome-assembled genome: SRR6007444_bin.151_CONCOCT_v1.1_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: Default

text: CONCOCT v1.1

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: description

text: Engineered

text: Engineered

text: Engineered

text: not provided

text: not provided

text: not provided

text: metagenome-assembled genome

text: metagenome

text: metagenome

text: uncultured Zoogloea sp.

characteristic: organism

characteristic: sample derived from

text: uncultured Zoogloea sp.

text: Illumina HiSeq 3000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR6007444_bin.152_CONCOCT_v1.1_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EBI

text: public

text: Default

characteristic: binning parameters

text: CONCOCT v1.1

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Engineered

characteristic: environment (biome)

text: Engineered

characteristic: environment (feature)

text: Engineered

characteristic: environment (material)

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: metagenome

text: metagenome

characteristic: metagenomic source

text: uncultured proteobacterium

characteristic: project name

text: uncultured proteobacterium

text: Illumina HiSeq 3000

text: multi-marker approach

text: Metagenome-assembled genome: SRR6007444_bin.157_CONCOCT_v1.1_MAG