characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: not provided

text: Feces

text: not provided

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: Metagenomic data of mice

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: MGG22178_1678865693

characteristic: title


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

tag: Namespace:UNIVERSITY OF GENEVA

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

text: Host-associated

text: not provided

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12506361 of study SRP278569.

characteristic: description

text: Feces

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

unit: DD

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Muribaculaceae bacterium

text: Metagenomic data of mice

characteristic: project name

characteristic: sample derived from

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG22223_1678865695


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: not provided

text: Feces

text: not provided

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Muribaculaceae bacterium

characteristic: organism

text: Metagenomic data of mice

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: MGG22230_1678865697

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

text: not provided

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12506360 of study SRP278569.

characteristic: description

text: Feces

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Alphaproteobacteria bacterium

text: Metagenomic data of mice

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG22245_1678865699


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: not provided

text: Feces

text: not provided

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Prevotella sp.

characteristic: organism

text: Metagenomic data of mice

text: uncultured Prevotella sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: MGG22257_1678865705

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

text: not provided

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12506359 of study SRP278569.

characteristic: description

text: Feces

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Oscillibacter sp.

text: Metagenomic data of mice

characteristic: project name

characteristic: sample derived from

text: uncultured Oscillibacter sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG22288_1678865707


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833.

text: Cecum

text: Switzerland

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: Metagenome data of mice exposed to 34 degree Celsius

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG29279_1678865708

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833.

characteristic: description

text: Cecum

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Oscillospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG29326_1678865710


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334834 of study SRP273833.

text: Cecum

text: Switzerland

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG29337_1678865712

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

text: Host-associated

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833.

characteristic: description

text: Cecum

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG29361_1678865715


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: Cecum

text: Switzerland

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Candidatus Melainabacteria bacterium

characteristic: organism

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG29362_1678865718

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Cecum

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospira sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospira sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG29377_1678865723


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: Cecum

text: Switzerland

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Oscillospiraceae bacterium

characteristic: organism

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG29392_1678865724

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833.

characteristic: description

text: Cecum

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG29434_1678865726


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833.

text: Feces

text: Switzerland

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Clostridium sp.

characteristic: organism

text: uncultured Clostridium sp.

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG29501_1678865728

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833.

characteristic: description

text: Feces

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

text: Metagenome data of mice exposed to 34 degree Celsius

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG29561_1678865729


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: Feces

text: Switzerland

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Bacilli bacterium

characteristic: organism

text: uncultured Bacilli bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG29573_1678865732

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833.

characteristic: description

text: Feces

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG29599_1678865737


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833.

text: Feces

text: Switzerland

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG29624_1678865741

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Feces

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Oscillospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG29649_1678865747


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833.

text: Feces

text: Switzerland

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Muribaculaceae bacterium

characteristic: organism

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG29719_1678865748

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833.

characteristic: description

text: Feces

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Oscillospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG29747_1678865750


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: Feces

text: Switzerland

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Agathobacter sp.

characteristic: organism

text: uncultured Agathobacter sp.

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG29749_1678865752

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Feces

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Dorea sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Dorea sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG29763_1678865753


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334847 of study SRP273833.

text: Feces

text: Switzerland

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Bacteroides sp.

characteristic: organism

text: uncultured Bacteroides sp.

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG29794_1678865755

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334846 of study SRP273833.

characteristic: description

text: Feces

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Eubacteriales bacterium

text: Metagenome data of mice exposed to 34 degree Celsius

characteristic: project name

characteristic: sample derived from

text: uncultured Eubacteriales bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG29816_1678865756


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: Feces

text: Switzerland

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Oscillospiraceae bacterium

characteristic: organism

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG29820_1678865759

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Feces

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Christensenella sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Christensenella sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG29822_1678865761


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: Feces

text: Switzerland

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Bacilli bacterium

characteristic: organism

text: uncultured Bacilli bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG29840_1678865762

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

text: Host-associated

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Feces

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Clostridium sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridium sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG29849_1678865765


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334845 of study SRP273833.

text: Cecum

text: Switzerland

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Oscillospiraceae bacterium

characteristic: organism

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG29869_1678865766

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334844 of study SRP273833.

characteristic: description

text: Cecum

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Christensenellaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG29885_1678865768


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: Cecum

text: Switzerland

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG29898_1678865771

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Cecum

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG29900_1678865772


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334843 of study SRP273833.

text: Cecum

text: Switzerland

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG29936_1678865775

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334840 of study SRP273833.

characteristic: description

text: Cecum

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Oscillospiraceae bacterium

text: Metagenome data of mice exposed to 34 degree Celsius

characteristic: project name

characteristic: sample derived from

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG29979_1678865778


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334838 of study SRP273833.

text: Cecum

text: Switzerland

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Eubacterium sp.

characteristic: organism

text: uncultured Eubacterium sp.

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG30025_1678865783

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334837 of study SRP273833.

characteristic: description

text: Cecum

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30058_1678865784


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: Cecum

text: Switzerland

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG30066_1678865786

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334821 of study SRP273833.

characteristic: description

text: Feces

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Mailhella sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Mailhella sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30078_1678865789


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334820 of study SRP273833.

text: Feces

text: Switzerland

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Hungatella sp.

characteristic: organism

text: uncultured Hungatella sp.

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG30132_1678865790

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334841 of study SRP273833.

characteristic: description

text: Feces

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Bacilli bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Bacilli bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30150_1678865791


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: Feces

text: Switzerland

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG30163_1678865795

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Feces

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Clostridiaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridiaceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30173_1678865797


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: Feces

text: Switzerland

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Oscillibacter sp.

characteristic: organism

text: uncultured Oscillibacter sp.

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG30179_1678865799

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Feces

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Clostridium sp.

text: Metagenome data of mice exposed to 34 degree Celsius

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridium sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30187_1678865801


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334830 of study SRP273833.

text: Feces

text: Switzerland

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG30204_1678865802

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334827 of study SRP273833.

characteristic: description

text: Feces

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30239_1678865808


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: broad-scale environmental context

text: Feces

text: Switzerland

text: not provided

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Ruthenibacterium sp.

characteristic: organism

text: uncultured Ruthenibacterium sp.

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG30246_1678865814

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR12334826 of study SRP273833.

characteristic: description

text: Feces

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Muribaculaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30282_1678865816


sam_EBP3064_draft genome

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: sam_EBP3064_draft genome

characteristic: Submitter Id

text: SeBiMER

characteristic: broker name

text: Ifremer, France

characteristic: collecting institution

text: Serratia proteamaculans

characteristic: common name

text: No

text: France

text: not collected

text: not collected

text: Nantes

characteristic: geographic location (region and locality)

characteristic: isolate

text: bacterial strain isolated from smoked salmon

text: Serratia proteamaculans

characteristic: organism

text: SEABIOMIC

text: Genome sequences were obtained from DNA extracts of bacterial isolates. illumina raw data were assembled using CELIA workflow (Ifremer).

text: EBP3064_draft genome

text: Serratia proteamaculans

text: Sequencing by synthesis (Illumina)

characteristic: strain

characteristic: title


sam_HIS2824_draft genome

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Ifremer

text: public

text: sam_HIS2824_draft genome

text: SeBiMER

text: Ifremer, France

characteristic: collection date

text: Morganella morganii

text: No

text: France

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Nantes

characteristic: investigation type

text: bacterial strain isolated from sardine

text: Morganella morganii

text: SEABIOMIC

characteristic: project name

text: HIS2824_draft genome

text: Morganella morganii

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method


sam_MIP2422_draft genome

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: sam_MIP2422_draft genome

characteristic: Submitter Id

text: SeBiMER

characteristic: broker name

text: Ifremer, France

text: Weeksellaceae bacterium

text: No

text: France

text: not collected

text: not collected

text: Nantes

text: bacterial strain isolated from fresh salmon

text: Weeksellaceae bacterium

text: SEABIOMIC

text: MIP2422_draft genome

text: Weeksellaceae bacterium

text: Sequencing by synthesis (Illumina)


sam_MIP2461_draft genome

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Ifremer

text: public

text: sam_MIP2461_draft genome

text: SeBiMER

text: Ifremer, France

characteristic: collecting institution

text: Hafnia paralvei

characteristic: common name

text: No

text: France

text: not collected

text: not collected

text: Nantes

characteristic: geographic location (region and locality)

text: Hafnia paralvei

characteristic: organism

text: SEABIOMIC

text: MIP2461_draft genome

text: Hafnia paralvei

text: Sequencing by synthesis (Illumina)

characteristic: strain

characteristic: title


sam_MIP2473 A_draft genome

characteristic: ENA-LAST-UPDATE

text: Ifremer

text: public

text: sam_MIP2473 A_draft genome

text: SeBiMER

text: Ifremer, France

characteristic: collection date

text: Photobacterium phosphoreum

text: No

text: France

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Nantes

characteristic: investigation type

text: MIP2473 A

characteristic: isolate

text: Photobacterium phosphoreum

text: SEABIOMIC

characteristic: project name

text: MIP2473 A_draft genome

text: Photobacterium phosphoreum

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: MIP2473 A

text: MIP2473 A_WGS


sam_MIP2602_draft genome

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: sam_MIP2602_draft genome

characteristic: Submitter Id

text: SeBiMER

characteristic: broker name

text: Ifremer, France

text: Serratia fonticola

text: No

text: France

text: not collected

text: not collected

text: Nantes

text: Serratia fonticola

text: SEABIOMIC

text: MIP2602_draft genome

text: Serratia fonticola

text: Sequencing by synthesis (Illumina)


sam_SAF3325_draft genome

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Ifremer

text: public

text: sam_SAF3325_draft genome

text: SeBiMER

text: Ifremer, France

characteristic: collecting institution

characteristic: collection date

text: Bacillus velezensis

characteristic: common name

text: No

text: France

text: not collected

text: not collected

text: Nantes

characteristic: geographic location (region and locality)

text: bacterial strain isolated from gravelax salmon

text: Bacillus velezensis

characteristic: organism

text: SEABIOMIC

text: SAF3325_draft genome

text: Bacillus velezensis

text: Sequencing by synthesis (Illumina)

characteristic: strain

characteristic: title


sam_SAF3333_draft genome

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

text: public

text: sam_SAF3333_draft genome

text: SeBiMER

text: Ifremer, France

text: Lactococcus piscium

text: No

text: France

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Nantes

characteristic: investigation type

characteristic: isolate

text: Lactococcus piscium

text: SEABIOMIC

characteristic: project name

text: SAF3333_draft genome

text: Lactococcus piscium

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method


sam_SF1039_draft genome

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: sam_SF1039_draft genome

characteristic: Submitter Id

text: SeBiMER

characteristic: broker name

text: Ifremer, France

text: Shewanella baltica

text: No

text: France

text: not collected

text: not collected

text: Nantes

text: Shewanella baltica

text: SEABIOMIC

text: SF1039_draft genome

text: Shewanella baltica

text: Sequencing by synthesis (Illumina)


sam_SF1671_draft genome

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

text: public

text: sam_SF1671_draft genome

text: SeBiMER

text: Ifremer, France

characteristic: collecting institution

characteristic: collection date

text: Pseudomonas fluorescens

characteristic: common name

text: No

text: France

text: not collected

text: not collected

text: Nantes

characteristic: geographic location (region and locality)

text: Pseudomonas fluorescens

characteristic: organism

text: SEABIOMIC

text: SF1671_draft genome

text: Pseudomonas fluorescens

text: Sequencing by synthesis (Illumina)

characteristic: strain

characteristic: title


sam_SF2022_draft genome

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Ifremer

text: public

text: sam_SF2022_draft genome

text: SeBiMER

text: Ifremer, France

text: Carnobacterium maltaromaticum

text: No

text: France

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Nantes

characteristic: investigation type

characteristic: isolate

text: Carnobacterium maltaromaticum

text: SEABIOMIC

characteristic: project name

text: SF2022_draft genome

text: Carnobacterium maltaromaticum

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: External Id

text: THE CHINESE UNIVERSITY OF HONG KONG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:THE CHINESE UNIVERSITY OF HONG KONG

characteristic: Submitter Id

unit: week

characteristic: age

text: ArrayExpress

characteristic: broker name

text: bone marrow-derived neutrophil

text: house mouse

text: Protocols: Bone marrow cells extracted from C57BL/6J mice were treated with 10% LLC1 conditional medium or normal medium as the control for 2 hours, then processed using the SimpleChIP Enzymatic Chromatin IP Kit according to the manufacturer’s instructions. Antibodies against Smad3 and IgG isotype were used for immunoprecipitation and DNA enrichment. We performed ChIP-seq for smad3 immuno-enriched DNA (Input and Smad3-IP) using the Illumina HiSeq platform (PE150bp, 40M raw read) and mapped clean sequences against GRCm38 using Bowtie2, and peaks were identified using model-based analysis for ChIP-Seq (MACS) with default parameters.

characteristic: description

text: adult

characteristic: developmental stage

text: Carcinoma, Lewis Lung

characteristic: disease

text: wild type genotype

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: bone marrow

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: THE CHINESE UNIVERSITY OF HONG KONG

text: public

text: ArrayExpress

text: bone marrow-derived neutrophil

text: house mouse

characteristic: common name

text: adult

text: normal

text: wild type genotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: bone marrow

text: Mus musculus

text: male

characteristic: strain

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: ETH Zurich

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:231-40

tag: Namespace:ETH Zurich

text: human

text: Compound=DMSO;Concentration=0.1%;Clone=1;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:231-41

characteristic: Submitter Id

text: human

text: Compound=DMSO;Concentration=0.1%;Clone=2;

characteristic: description

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:232-42

text: human

text: Compound=DMSO;Concentration=0.1%;Clone=3;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:232-43

text: human

text: Compound=DMSO;Concentration=0.1%;Clone=4;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:232-44

text: human

text: Compound=DMSO;Concentration=0.1%;Clone=5;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:232-45

text: human

text: Compound=MNNG;Concentration=4uM;Clone=1;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:232-46

text: human

text: Compound=MNNG;Concentration=4uM;Clone=2;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:232-47

text: human

text: Compound=MNNG;Concentration=4uM;Clone=3;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:232-48

text: human

text: Compound=MNNG;Concentration=4uM;Clone=4;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:232-49

text: human

text: Compound=MNNG;Concentration=4uM;Clone=5;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:232-50

text: human

text: Compound=NNK;Concentration=30uM;Clone=1;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:232-51

text: human

text: Compound=NNK;Concentration=30uM;Clone=2;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:232-52

text: human

text: Compound=NNK;Concentration=30uM;Clone=3;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:232-53

text: human

text: Compound=NNK;Concentration=30uM;Clone=4;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:233-54

text: human

text: Compound=NNK;Concentration=30uM;Clone=5;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:233-55

text: human

text: Compound=Harmane;Concentration=1.5mM;Clone=1;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:233-56

text: human

text: Compound=Harmane;Concentration=1.5mM;Clone=2;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:233-57

text: human

text: Compound=Harmane;Concentration=1.5mM;Clone=3;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:233-58

text: human

text: Compound=Harmane;Concentration=1.5mM;Clone=4;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:233-59

text: human

text: Compound=Harmane;Concentration=1.5mM;Clone=5;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:233-60

text: human

text: Compound=Norharmane;Concentration=1.5mM;Clone=1;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:233-61

text: human

text: Compound=Norharmane;Concentration=1.5mM;Clone=2;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:233-62

text: human

text: Compound=Norharmane;Concentration=1.5mM;Clone=3;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:233-63

text: human

text: Compound=Norharmane;Concentration=1.5mM;Clone=4;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:233-64

text: human

text: Compound=Norharmane;Concentration=1.5mM;Clone=5;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:233-65

text: human

text: Compound=1-napthylamine;Concentration=2.2mM;Clone=1;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:233-66

text: human

text: Compound=1-napthylamine;Concentration=2.2mM;Clone=2;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:233-67

text: human

text: Compound=1-napthylamine;Concentration=2.2mM;Clone=3;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:234-68

text: human

text: Compound=1-napthylamine;Concentration=2.2mM;Clone=4;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:234-69

text: human

text: Compound=1-napthylamine;Concentration=2.2mM;Clone=5;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:234-70

text: human

text: Compound=3-aminobiphenyl;Concentration=1.15mM;Clone=1;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:234-71

text: human

text: Compound=3-aminobiphenyl;Concentration=1.15mM;Clone=2;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:234-72

text: human

text: Compound=3-aminobiphenyl;Concentration=1.15mM;Clone=3;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:234-73

text: human

text: Compound=3-aminobiphenyl;Concentration=1.15mM;Clone=4;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:234-74

text: human

text: Compound=3-aminobiphenyl;Concentration=1.15mM;Clone=5;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:234-75

text: human

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:234-76

text: human

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:234-77

text: human

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:234-78

text: human

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:234-79

text: human

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:235-80

text: human

text: Compound=DMSO;Concentration=0.1%;Clone=1;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:235-81

text: human

text: Compound=BaP;Concentration=10uM;Clone=1;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:235-82

text: human

text: Compound=BaP;Concentration=10uM;Clone=2;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:235-83

text: human

text: Compound=BaP;Concentration=10uM;Clone=3;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:235-84

text: human

text: Compound=BaP;Concentration=10uM;Clone=4;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:235-85

text: human

text: Compound=BaP;Concentration=10uM;Clone=5;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:235-86

text: human

text: Compound=BaP;Concentration=20uM;Clone=1;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:235-87

text: human

text: Compound=BaP;Concentration=20uM;Clone=2;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:235-88

text: human

text: Compound=BaP;Concentration=20uM;Clone=3;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:235-89

text: human

text: Compound=BaP;Concentration=20uM;Clone=4;

text: Homo sapiens

text: Homo sapiens


text: ETH Zurich

text: public

text: ena-SAMPLE-TAB-15-03-2023-12:07:34:235-90

text: human

text: Compound=BaP;Concentration=20uM;Clone=5;

text: Homo sapiens

text: Homo sapiens


text: public

tag: Namespace:West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Scotland

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: Scotland

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

text: not provided

characteristic: title

text: not provided


text: Ifremer

text: public

text: SeBiMER

characteristic: broker name

text: Ifremer, France

characteristic: collecting institution

text: Serratia proteamaculans

characteristic: common name

text: No

text: not collected

characteristic: experimental factor

text: France

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Nantes

characteristic: geographic location (region and locality)

characteristic: investigation type

text: bacterial strain isolated from shrimp

text: Serratia proteamaculans

text: SEABIOMIC

characteristic: project name

text: Raw data were obtained by sequencing on a MinIOn MK1C DNA extracts from bacterial isolates. Library was prepared using PCR Barcoding of genomic DNA kit. Demultiplexing of the fast5 files was conducted with Guppy v6.1.1.

text: Serratia proteamaculans

text: Nanopore Sequencing

characteristic: sequencing method

characteristic: strain

text: CD3406_WGS_raw data_library PCR


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SeBiMER

text: Ifremer, France

text: Serratia proteamaculans

text: No

text: not collected

text: France

text: not collected

text: not collected

text: Nantes

characteristic: isolate

text: bacterial strain isolated from smoked salmon

text: Serratia proteamaculans

text: SEABIOMIC

text: Raw data were obtained by sequencing on a MinIOn MK1C DNA extracts from bacterial isolates. Library was prepared using PCR Barcoding of genomic DNA kit.Demultiplexing of the fast5 files was conducted with Guppy v6.1.1.

text: Serratia proteamaculans

text: Nanopore Sequencing

text: EBP3064_WGS_raw data_library PCR


text: Ifremer

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SeBiMER

characteristic: broker name

text: Ifremer, France

characteristic: collecting institution

text: Morganella morganii

characteristic: common name

text: No

text: not collected

characteristic: experimental factor

text: France

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: Nantes

text: bacterial strain isolated from sardine

text: Morganella morganii

characteristic: organism

text: SEABIOMIC

text: Morganella morganii

text: Nanopore Sequencing

text: HIS2824_WGS_raw data_library PCR

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Ifremer

text: public

text: SeBiMER

text: Ifremer, France

text: Weeksellaceae bacterium

text: No

text: not collected

text: France

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Nantes

characteristic: geographic location (region and locality)

characteristic: investigation type

text: bacterial strain isolated from fresh salmon

text: Weeksellaceae bacterium

text: SEABIOMIC

characteristic: project name

text: Weeksellaceae bacterium

text: Nanopore Sequencing

characteristic: sequencing method

characteristic: strain

text: MIP2422_WGS_raw data_library PCR


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SeBiMER

text: Ifremer, France

text: Hafnia paralvei

text: No

text: not collected

text: France

text: not collected

text: not collected

text: Nantes

characteristic: isolate

text: Hafnia paralvei

text: SEABIOMIC

text: Hafnia paralvei

text: Nanopore Sequencing

text: MIP2461_WGS_raw data_library PCR


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Ifremer

text: public

text: SeBiMER

characteristic: broker name

text: Ifremer, France

characteristic: collecting institution

text: Photobacterium phosphoreum

characteristic: common name

text: No

text: not collected

characteristic: experimental factor

text: France

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: Nantes

text: Photobacterium phosphoreum

characteristic: organism

text: SEABIOMIC

text: Photobacterium phosphoreum

text: Nanopore Sequencing

text: MIP2473_WGS_raw data_library PCR

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ifremer

text: public

text: SeBiMER

text: Ifremer, France

text: Serratia fonticola

text: No

text: not collected

text: France

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Nantes

characteristic: geographic location (region and locality)

characteristic: investigation type

text: Serratia fonticola

text: SEABIOMIC

characteristic: project name

text: Serratia fonticola

text: Nanopore Sequencing

characteristic: sequencing method

characteristic: strain

text: MIP2602_WGS_raw data_library PCR


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SeBiMER

text: Ifremer, France

text: not provided

text: unclassified bacterium

text: No

text: not provided

text: not provided

text: not provided

text: not provided

text: not provided

text: not provided

text: bacterium

text: SEABIOMIC

text: bacterium

text: Nanopore Sequencing

text: Unclassified_WGS_raw data_library PCR


characteristic: ENA-LAST-UPDATE

text: Ifremer

text: public

text: SeBiMER

characteristic: broker name

text: Ifremer, France

characteristic: collecting institution

text: Bacillus velezensis

characteristic: common name

text: No

text: not collected

characteristic: experimental factor

text: France

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: Nantes

characteristic: isolate

text: Bacillus velezensis

characteristic: organism

text: SEABIOMIC

text: Bacillus velezensis

text: Nanopore Sequencing

text: SAF3325_WGS_raw data_library PCR

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

text: public

text: SeBiMER

text: Ifremer, France

text: Lactococcus piscium

text: No

text: not collected

text: France

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Nantes

characteristic: geographic location (region and locality)

characteristic: investigation type

text: bacterial strain isolated from gravelax salmon

text: Lactococcus piscium

text: SEABIOMIC

characteristic: project name

text: Lactococcus piscium

text: Nanopore Sequencing

characteristic: sequencing method

characteristic: strain

text: SAF3333_WGS_raw data_library PCR


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SeBiMER

characteristic: broker name

text: Ifremer, France

text: Shewanella baltica

text: No

text: not collected

text: France

text: not collected

text: not collected

text: Nantes

text: Shewanella baltica

text: SEABIOMIC

text: Shewanella baltica

text: Nanopore Sequencing

text: SF1039_WGS_raw data_library PCR


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

text: public

text: SeBiMER

text: Ifremer, France

characteristic: collecting institution

text: Pseudomonas fluorescens

characteristic: common name

text: No

text: not collected

characteristic: experimental factor

text: France

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: Nantes

characteristic: isolate

text: Pseudomonas fluorescens

characteristic: organism

text: SEABIOMIC

text: Pseudomonas fluorescens

text: Nanopore Sequencing

text: SF1671_WGS_raw data_library PCR

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Ifremer

text: public

text: SeBiMER

text: Ifremer, France

text: Carnobacterium maltaromaticum

text: No

text: not collected

text: France

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Nantes

characteristic: geographic location (region and locality)

characteristic: investigation type

text: Carnobacterium maltaromaticum

text: SEABIOMIC

characteristic: project name

text: Carnobacterium maltaromaticum

text: Nanopore Sequencing

characteristic: sequencing method

characteristic: strain

text: SF2022_WGS_raw data_library PCR


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SeBiMER

characteristic: broker name

text: Ifremer, France

text: not provided

text: unclassified bacterium

text: No

text: not provided

text: not provided

text: not provided

text: not provided

text: not provided

text: not provided

text: bacterium

text: SEABIOMIC

text: Raw data were obtained by sequencing on a MinIOn MK1C DNA extracts from bacterial isolates. Library was prepared using Genomic DNA by ligation kit.Demultiplexing of the fast5 files was conducted with Guppy v6.1.1.

text: bacterium

text: Nanopore Sequencing

text: Unclassified_WGS_raw data_library LIGATION


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Ifremer

text: public

text: SeBiMER

text: Ifremer, France

characteristic: collecting institution

text: Serratia proteamaculans

characteristic: common name

text: No

text: not collected

characteristic: experimental factor

text: France

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: Nantes

characteristic: isolate

text: bacterial strain isolated from shrimp

text: Serratia proteamaculans

characteristic: organism

text: SEABIOMIC

text: Raw data were obtained by sequencing on a MinIOn MK1C DNA extracts from bacterial isolates. Library was prepared using Rapid Barcoding sequencing kit.Demultiplexing of the fast5 files was conducted with Guppy v6.1.1.

text: Serratia proteamaculans

text: Nanopore Sequencing

text: CD3406_WGS_raw data_library TAGMENTATION

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

text: public

text: SeBiMER

text: Ifremer, France

text: Serratia proteamaculans

text: No

text: not collected

text: France

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Nantes

characteristic: geographic location (region and locality)

characteristic: investigation type

text: Serratia proteamaculans

text: SEABIOMIC

characteristic: project name

text: Serratia proteamaculans

text: Nanopore Sequencing

characteristic: sequencing method

characteristic: strain

text: EBP3064_WGS_raw data_library TAGMENTATION


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SeBiMER

characteristic: broker name

text: Ifremer, France

text: Morganella morganii

text: No

text: not collected

text: France

text: not collected

text: not collected

text: Nantes

text: bacterial strain isolated from sardine

text: Morganella morganii

text: SEABIOMIC

text: Morganella morganii

text: Nanopore Sequencing

text: HIS2824_WGS_raw data_library TAGMENTATION


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

text: public

text: SeBiMER

text: Ifremer, France

characteristic: collecting institution

text: Weeksellaceae bacterium

characteristic: common name

text: No

text: not collected

characteristic: experimental factor

text: France

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: Nantes

characteristic: isolate

text: Weeksellaceae bacterium

characteristic: organism

text: SEABIOMIC

text: Weeksellaceae bacterium

text: Nanopore Sequencing

text: MIP2422_WGS_raw data_library TAGMENTATION

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Ifremer

text: public

text: SeBiMER

text: Ifremer, France

text: Hafnia paralvei

text: No

text: not collected

text: France

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Nantes

characteristic: geographic location (region and locality)

characteristic: investigation type

text: Hafnia paralvei

text: SEABIOMIC

characteristic: project name

text: Hafnia paralvei

text: Nanopore Sequencing

characteristic: sequencing method

characteristic: strain

text: MIP2461_WGS_raw data_library TAGMENTATION


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SeBiMER

characteristic: broker name

text: Ifremer, France

text: Photobacterium phosphoreum

text: No

text: not collected

text: France

text: not collected

text: not collected

text: Nantes

text: Photobacterium phosphoreum

text: SEABIOMIC

text: Photobacterium phosphoreum

text: Nanopore Sequencing

text: MIP2473_WGS_raw data_library TAGMENTATION


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Ifremer

text: public

text: SeBiMER

text: Ifremer, France

characteristic: collecting institution

text: Serratia fonticola

characteristic: common name

text: No

text: not collected

characteristic: experimental factor

text: France

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: Nantes

characteristic: isolate

text: Serratia fonticola

characteristic: organism

text: SEABIOMIC

text: Serratia fonticola

text: Nanopore Sequencing

text: MIP2602_WGS_raw data_library TAGMENTATION

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

text: public

text: SeBiMER

text: Ifremer, France

text: not provided

text: unclassified bacterium

text: No

text: not collected

text: France

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Nantes

characteristic: geographic location (region and locality)

characteristic: investigation type

text: bacterium

text: SEABIOMIC

characteristic: project name

text: bacterium

text: Nanopore Sequencing

characteristic: sequencing method

text: Unclassified_WGS_raw data_library TAGMENTATION


characteristic: ENA-FIRST-PUBLIC

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SeBiMER

characteristic: broker name

text: Ifremer, France

text: Bacillus velezensis

text: No

text: not collected

text: France

text: not collected

text: not collected

text: Nantes

text: Bacillus velezensis

text: SEABIOMIC

text: Bacillus velezensis

text: Nanopore Sequencing

characteristic: strain

text: SAF3325_WGS_raw data_library TAGMENTATION


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: Ifremer

text: public

text: SeBiMER

text: Ifremer, France

characteristic: collecting institution

text: Lactococcus piscium

characteristic: common name

text: No

text: not collected

characteristic: experimental factor

text: France

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: Nantes

characteristic: isolate

text: Lactococcus piscium

characteristic: organism

text: SEABIOMIC

text: Lactococcus piscium

text: Nanopore Sequencing

text: SAF3333_WGS_raw data_library TAGMENTATION

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

text: public

text: SeBiMER

text: Ifremer, France

text: Shewanella baltica

text: No

text: not collected

text: France

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Nantes

characteristic: geographic location (region and locality)

characteristic: investigation type

text: bacterial strain isolated from smoked salmon

text: Shewanella baltica

text: SEABIOMIC

characteristic: project name

text: Shewanella baltica

text: Nanopore Sequencing

characteristic: sequencing method

text: SF1039_WGS_raw data_library TAGMENTATION


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: Ifremer

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SeBiMER

characteristic: broker name

text: Ifremer, France

text: Pseudomonas fluorescens

text: No

text: not collected

text: France

text: not collected

text: not collected

text: Nantes

text: Pseudomonas fluorescens

text: SEABIOMIC

text: Pseudomonas fluorescens

text: Nanopore Sequencing

characteristic: strain

text: SF1671_WGS_raw data_library TAGMENTATION


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: Ifremer

text: public

text: SeBiMER

text: Ifremer, France

characteristic: collecting institution

text: Carnobacterium maltaromaticum

characteristic: common name

text: No

text: not collected

characteristic: experimental factor

text: France

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: Nantes

characteristic: isolate

text: Carnobacterium maltaromaticum

characteristic: organism

text: SEABIOMIC

text: Carnobacterium maltaromaticum

text: Nanopore Sequencing

text: SF2022_WGS__raw data_library TAGMENTATION

characteristic: title