characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Porphyromonadaceae bacterium UBA7043

text: Development of Inflammatory Bowel Disease is Linked to a Longitudinal Restructuring of the Gut Metagenome in Mice

characteristic: project name

characteristic: sample derived from

text: Porphyromonadaceae bacterium UBA7043

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927717.51_1677798532


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR5927717 of study SRP115267.

characteristic: description

text: feces

text: USA

unit: DD

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Lachnospiraceae bacterium

characteristic: organism

text: Lachnospiraceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927717.53_1677798532

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Bacteroidales bacterium

characteristic: project name

characteristic: sample derived from

text: Bacteroidales bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927717.54_1677798533


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Bacteroides sp.

characteristic: organism

text: uncultured Bacteroides sp.

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927717.56_1677798533

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Muribaculaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Muribaculaceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927717.57_1677798535


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Porphyromonadaceae bacterium UBA7088

characteristic: organism

text: Porphyromonadaceae bacterium UBA7088

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927717.62_1677798535

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Muribaculaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927717.66_1677798535


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Bacteroidales bacterium M2

characteristic: organism

text: Bacteroidales bacterium M2

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927717.67_1677798536

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Bacteroidales bacterium

characteristic: project name

characteristic: sample derived from

text: Bacteroidales bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927717.68_1677798537


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Parabacteroides distasonis

characteristic: organism

text: Parabacteroides distasonis

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927717.72_1677798537

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Muribaculaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927717.76_1677798538


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Prevotellamassilia sp.

characteristic: organism

text: uncultured Prevotellamassilia sp.

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927717.81_1677798538

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Christensenellaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927717.82_1677798538


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Lachnospiraceae bacterium

characteristic: organism

text: Development of Inflammatory Bowel Disease is Linked to a Longitudinal Restructuring of the Gut Metagenome in Mice

text: Lachnospiraceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927717.83_1677798538

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Christensenella sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Christensenella sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927717.85_1677798539


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR5927717 of study SRP115267.

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Parabacteroides sp.

characteristic: organism

text: uncultured Parabacteroides sp.

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927717.87_1677798539

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Lachnospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: Lachnospiraceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927717.88_1677798539


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Rikenellaceae bacterium

characteristic: organism

text: uncultured Rikenellaceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927717.93_1677798539

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Muribaculaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927717.94_1677798540


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Christensenella sp.

characteristic: organism

text: uncultured Christensenella sp.

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927717.95_1677798540

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Christensenella sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Christensenella sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927717.96_1677798540


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR5927718 of study SRP115267.

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Muribaculaceae bacterium Isolate-043 (Harlan)

characteristic: organism

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927718.5_1677798541

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927718.14_1677798541


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Oscillibacter sp.

characteristic: organism

text: uncultured Oscillibacter sp.

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927718.18_1677798541

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Oscillospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927718.20_1677798542


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: bacterium 1xD42-87

characteristic: organism

text: Development of Inflammatory Bowel Disease is Linked to a Longitudinal Restructuring of the Gut Metagenome in Mice

text: bacterium 1xD42-87

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927718.21_1677798542

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Lachnospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: Lachnospiraceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927718.22_1677798542


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927718.25_1677798543

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927718.32_1677798543


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Christensenella sp.

characteristic: organism

text: uncultured Christensenella sp.

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927718.34_1677798543

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Acetatifactor sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927718.41_1677798544


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Muribaculaceae bacterium

characteristic: organism

text: Muribaculaceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927718.43_1677798545

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Porphyromonadaceae bacterium UBA7095

characteristic: project name

characteristic: sample derived from

text: Porphyromonadaceae bacterium UBA7095

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927718.45_1677798545


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Porphyromonadaceae bacterium UBA3276

characteristic: organism

text: Porphyromonadaceae bacterium UBA3276

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927718.51_1677798546

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR5927718 of study SRP115267.

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Muribaculaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927718.52_1677798546


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Helicobacter hepaticus ATCC 51449

characteristic: organism

text: Helicobacter hepaticus ATCC 51449

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927718.58_1677798546

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Lachnospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: Lachnospiraceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927718.61_1677798546


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Oscillibacter sp.

characteristic: organism

text: uncultured Oscillibacter sp.

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927718.62_1677798547

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Porphyromonadaceae bacterium UBA7173

characteristic: project name

characteristic: sample derived from

text: Porphyromonadaceae bacterium UBA7173

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927718.63_1677798547


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Muribaculaceae bacterium

characteristic: organism

text: Development of Inflammatory Bowel Disease is Linked to a Longitudinal Restructuring of the Gut Metagenome in Mice

text: Muribaculaceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927718.64_1677798548

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Alistipes sp. UBA6068

characteristic: project name

characteristic: sample derived from

text: Alistipes sp. UBA6068

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927718.65_1677798548


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Lachnospiraceae bacterium

characteristic: organism

text: Lachnospiraceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927718.70_1677798548

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Christensenella sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Christensenella sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927718.75_1677798549


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Helicobacter typhlonius

characteristic: organism

text: Helicobacter typhlonius

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927718.84_1677798549

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Mailhella sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Mailhella sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927718.85_1677798549


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Muribaculaceae bacterium Isolate-084 (Janvier)

characteristic: organism

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927718.86_1677798550

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Porphyromonadaceae bacterium UBA7167

characteristic: project name

characteristic: sample derived from

text: Porphyromonadaceae bacterium UBA7167

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927718.92_1677798550


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR5927718 of study SRP115267.

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Helicobacter sp. UBA3407

characteristic: organism

text: Helicobacter sp. UBA3407

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927718.94_1677798550

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Lachnospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: Lachnospiraceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927718.98_1677798550


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Bacteroides sp.

characteristic: organism

text: uncultured Bacteroides sp.

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927718.101_1677798551

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Muribaculaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927718.107_1677798553


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Muribaculaceae bacterium Isolate-104 (HZI)

characteristic: organism

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927718.108_1677798554

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR5927719 of study SRP115267.

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Porphyromonadaceae bacterium UBA7088

text: Development of Inflammatory Bowel Disease is Linked to a Longitudinal Restructuring of the Gut Metagenome in Mice

characteristic: project name

characteristic: sample derived from

text: Porphyromonadaceae bacterium UBA7088

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927719.2_1677798554


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Bacteroidales bacterium

characteristic: organism

text: Bacteroidales bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927719.3_1677798554

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Bacteroides acidifaciens

characteristic: project name

characteristic: sample derived from

text: Bacteroides acidifaciens

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927719.4_1677798555


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Faecalibaculum sp.

characteristic: organism

text: uncultured Faecalibaculum sp.

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927719.8_1677798555

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Parabacteroides distasonis

characteristic: project name

characteristic: sample derived from

text: Parabacteroides distasonis

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927719.11_1677798555


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Muribaculaceae bacterium

characteristic: organism

text: Muribaculaceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927719.14_1677798555

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927719.15_1677798556


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Muribaculaceae bacterium

characteristic: organism

text: Muribaculaceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927719.18_1677798556

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Muribaculaceae bacterium Isolate-043 (Harlan)

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927719.19_1677798556


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Bacteroides sp.

characteristic: organism

text: uncultured Bacteroides sp.

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927719.23_1677798557

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Alistipes sp. UBA6068

characteristic: project name

characteristic: sample derived from

text: Alistipes sp. UBA6068

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927719.24_1677798558


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: bacterium 1xD42-87

characteristic: organism

text: bacterium 1xD42-87

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927719.25_1677798559

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927719.26_1677798559


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR5927719 of study SRP115267.

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Porphyromonadaceae bacterium UBA3276

characteristic: organism

text: Porphyromonadaceae bacterium UBA3276

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927719.28_1677798559

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Bacteroidales bacterium

text: Development of Inflammatory Bowel Disease is Linked to a Longitudinal Restructuring of the Gut Metagenome in Mice

characteristic: project name

characteristic: sample derived from

text: Bacteroidales bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927719.29_1677798560


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Porphyromonadaceae bacterium UBA7173

characteristic: organism

text: Porphyromonadaceae bacterium UBA7173

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927719.30_1677798560

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927719.31_1677798560


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Porphyromonadaceae bacterium UBA7095

characteristic: organism

text: Porphyromonadaceae bacterium UBA7095

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927719.32_1677798561

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Muribaculaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Muribaculaceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927719.34_1677798561


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Muribaculaceae bacterium Isolate-084 (Janvier)

characteristic: organism

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927719.35_1677798561

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Porphyromonadaceae bacterium UBA7145

characteristic: project name

characteristic: sample derived from

text: Porphyromonadaceae bacterium UBA7145

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927719.36_1677798562


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Muribaculaceae bacterium

characteristic: organism

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927719.37_1677798562

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927719.39_1677798563


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Lachnospiraceae bacterium

characteristic: organism

text: Lachnospiraceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927719.40_1677798563

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Porphyromonadaceae bacterium UBA7043

characteristic: project name

characteristic: sample derived from

text: Porphyromonadaceae bacterium UBA7043

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927719.44_1677798563


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Muribaculaceae bacterium

characteristic: organism

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927719.47_1677798564

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR5927719 of study SRP115267.

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Helicobacter apodemus

characteristic: project name

characteristic: sample derived from

text: Helicobacter apodemus

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927719.48_1677798564


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Porphyromonadaceae bacterium UBA7167

characteristic: organism

text: Development of Inflammatory Bowel Disease is Linked to a Longitudinal Restructuring of the Gut Metagenome in Mice

text: Porphyromonadaceae bacterium UBA7167

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927719.50_1677798564

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Parasutterella sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Parasutterella sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927719.51_1677798565


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Helicobacter typhlonius

characteristic: organism

text: Helicobacter typhlonius

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927719.52_1677798565

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Prevotella sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Prevotella sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927719.54_1677798565


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Lachnospiraceae bacterium

characteristic: organism

text: Lachnospiraceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927719.55_1677798565

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927719.56_1677798566


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Lachnospiraceae bacterium

characteristic: organism

text: Lachnospiraceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927719.57_1677798566

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Ligilactobacillus murinus

characteristic: project name

characteristic: sample derived from

text: Ligilactobacillus murinus

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927719.58_1677798566


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR5927720 of study SRP115267.

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Helicobacter typhlonius

characteristic: organism

text: Helicobacter typhlonius

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927720.1_1677798567

characteristic: title


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Phocaeicola sartorii

characteristic: project name

characteristic: sample derived from

text: Phocaeicola sartorii

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: extra-SRR5927720.2_1677798567


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

text: CheckM

characteristic: description

text: feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Muribaculaceae bacterium

characteristic: organism

text: Muribaculaceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: extra-SRR5927720.3_1677798567

characteristic: title