characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP020572. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR1762095,ERR1762096,ERR1762097,ERR1762098.

text: Feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: Alistipes finegoldii

characteristic: organism

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR1762095,ERR1762096,ERR1762097,ERR1762098 of study ERP020572.

text: Alistipes finegoldii

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: MGG30425_1680015446

characteristic: title


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

tag: Namespace:UNIVERSITY OF GENEVA

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP020572. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR1762103,ERR1762104,ERR1762105,ERR1762106.

characteristic: description

text: Feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Clostridiaceae bacterium

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR1762103,ERR1762104,ERR1762105,ERR1762106 of study ERP020572.

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridiaceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30452_1680015515


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP020572. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR1762111,ERR1762112,ERR1762113,ERR1762114.

text: Feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Oscillospiraceae bacterium

characteristic: organism

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR1762111,ERR1762112,ERR1762113,ERR1762114 of study ERP020572.

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: MGG30477_1680015434

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Oscillospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30481_1680015450


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: Feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: MGG30483_1680015442

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP020572. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR1762115,ERR1762116,ERR1762117,ERR1762118.

characteristic: description

text: Feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Angelakisella sp.

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR1762115,ERR1762116,ERR1762117,ERR1762118 of study ERP020572.

characteristic: project name

characteristic: sample derived from

text: uncultured Angelakisella sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30503_1680015428


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: Feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Oscillospiraceae bacterium

characteristic: organism

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: MGG30512_1680015485

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP020572. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR1762119,ERR1762120,ERR1762121,ERR1762122.

characteristic: description

text: Feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Oscillospiraceae bacterium

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR1762119,ERR1762120,ERR1762121,ERR1762122 of study ERP020572.

characteristic: project name

characteristic: sample derived from

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30524_1680015462


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: Feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: MGG30527_1680015434

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP020572. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR1762123,ERR1762124,ERR1762125,ERR1762126.

characteristic: description

text: Feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR1762123,ERR1762124,ERR1762125,ERR1762126 of study ERP020572.

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30540_1680015517


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: Feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: MGG30545_1680015486

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Oscillospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30548_1680015451


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: Feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: MGG30550_1680015492

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP020572. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR1762127,ERR1762128,ERR1762129,ERR1762130.

characteristic: description

text: Feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Acetatifactor sp.

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR1762127,ERR1762128,ERR1762129,ERR1762130 of study ERP020572.

characteristic: project name

characteristic: sample derived from

text: uncultured Acetatifactor sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30561_1680015445


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP020572. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR1762131,ERR1762132,ERR1762133,ERR1762134.

text: Feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Oscillospiraceae bacterium

characteristic: organism

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR1762131,ERR1762132,ERR1762133,ERR1762134 of study ERP020572.

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: MGG30570_1680015457

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Oscillospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30575_1680015509


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: Feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: MGG30580_1680015458

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP020572. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR1762135,ERR1762136,ERR1762137,ERR1762138.

characteristic: description

text: Feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR1762135,ERR1762136,ERR1762137,ERR1762138 of study ERP020572.

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30586_1680015460


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP108585. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR2560564,ERR2560565,ERR2560566.

text: Feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: Klebsiella michiganensis

characteristic: organism

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR2560564,ERR2560565,ERR2560566 of study ERP108585.

text: Klebsiella michiganensis

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG30631_1680015432

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP108585. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR2560567,ERR2560568,ERR2560569.

characteristic: description

text: Feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Eubacteriales bacterium

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR2560567,ERR2560568,ERR2560569 of study ERP108585.

characteristic: project name

characteristic: sample derived from

text: uncultured Eubacteriales bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30646_1680015440


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP108585. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR2560603,ERR2560604,ERR2560605.

text: Feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Muribaculum sp.

characteristic: organism

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR2560603,ERR2560604,ERR2560605 of study ERP108585.

text: uncultured Muribaculum sp.

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG30742_1680015455

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP108585. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR2560606,ERR2560607,ERR2560608.

characteristic: description

text: Feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Blautia sp.

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR2560606,ERR2560607,ERR2560608 of study ERP108585.

characteristic: project name

characteristic: sample derived from

text: uncultured Blautia sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30755_1680015487


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP108585. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR2560612,ERR2560613,ERR2560614.

text: Feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Staphylococcus sp.

characteristic: organism

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR2560612,ERR2560613,ERR2560614 of study ERP108585.

text: uncultured Staphylococcus sp.

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG30766_1680015505

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP108585. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR2560615,ERR2560616,ERR2560617.

characteristic: description

text: Feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Alistipes sp.

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR2560615,ERR2560616,ERR2560617 of study ERP108585.

characteristic: project name

characteristic: sample derived from

text: uncultured Alistipes sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30774_1680015441


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP108585. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR2560639,ERR2560640,ERR2560641.

text: Feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Eggerthellaceae bacterium

characteristic: organism

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR2560639,ERR2560640,ERR2560641 of study ERP108585.

text: uncultured Eggerthellaceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG30843_1680015442

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP108585. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR2560645,ERR2560646,ERR2560647.

characteristic: description

text: Feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Clostridium sp.

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR2560645,ERR2560646,ERR2560647 of study ERP108585.

characteristic: project name

characteristic: sample derived from

text: uncultured Clostridium sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30859_1680015474


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP108585. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR2560651,ERR2560652,ERR2560653.

text: Feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Eggerthellaceae bacterium

characteristic: organism

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR2560651,ERR2560652,ERR2560653 of study ERP108585.

text: uncultured Eggerthellaceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG30867_1680015445

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Adlercreutzia sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Adlercreutzia sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30871_1680015461


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: Feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Duncaniella sp.

characteristic: organism

text: uncultured Duncaniella sp.

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG30877_1680015440

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP108585. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR2560654,ERR2560655,ERR2560656.

characteristic: description

text: Feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Muribaculaceae bacterium

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR2560654,ERR2560655,ERR2560656 of study ERP108585.

characteristic: project name

characteristic: sample derived from

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30880_1680015505


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: Feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: uncultured Clostridia bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG30885_1680015467

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Eggerthellaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Eggerthellaceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30888_1680015448


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: Feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Bacilli bacterium

characteristic: organism

text: uncultured Bacilli bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG30891_1680015441

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Erysipelotrichaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30896_1680015486


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP108585. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR2560657,ERR2560658,ERR2560659.

text: Feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Muribaculaceae bacterium

characteristic: organism

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR2560657,ERR2560658,ERR2560659 of study ERP108585.

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG30915_1680015469

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP108585. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR2560669,ERR2560670,ERR2560671.

characteristic: description

text: Feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Eggerthellaceae bacterium

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR2560669,ERR2560670,ERR2560671 of study ERP108585.

characteristic: project name

characteristic: sample derived from

text: uncultured Eggerthellaceae bacterium

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30959_1680015428


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: Feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG30961_1680015514

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP108585. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR2560672,ERR2560673,ERR2560674.

characteristic: description

text: Feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Eggerthella sp.

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR2560672,ERR2560673,ERR2560674 of study ERP108585.

characteristic: project name

characteristic: sample derived from

text: uncultured Eggerthella sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG30976_1680015451


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP108585. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR2560675,ERR2560676,ERR2560677.

text: Feces

text: USA

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Muribaculaceae bacterium

characteristic: organism

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR2560675,ERR2560676,ERR2560677 of study ERP108585.

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: MGG30985_1680015484

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP108585. This sample represents a Metagenome-assembled genome from the metagenomic runs ERR2560684,ERR2560685,ERR2560686.

characteristic: description

text: Feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Duncaniella sp.

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs ERR2560684,ERR2560685,ERR2560686 of study ERP108585.

characteristic: project name

characteristic: sample derived from

text: uncultured Duncaniella sp.

text: Illumina HiSeq 4000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG31006_1680015446


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP107170. This sample represents a Metagenome-assembled genome from the metagenomic runs SRR5574494,SRR5574495,SRR5574496.

text: Gut

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Alphaproteobacteria bacterium

characteristic: organism

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs SRR5574494,SRR5574495,SRR5574496 of study SRP107170.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: MGG31135_1680015427

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Gut

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Lactobacillus acidophilus

characteristic: project name

characteristic: sample derived from

text: Lactobacillus acidophilus

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG31187_1680015482


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: Gut

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Azospirillum sp.

characteristic: organism

text: uncultured Azospirillum sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: MGG31195_1680015490

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Gut

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Christensenellaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG31196_1680015446


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP107170. This sample represents a Metagenome-assembled genome from the metagenomic runs SRR5574505,SRR5574504,SRR5574503.

text: Gut

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Bacteroidales bacterium

characteristic: organism

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs SRR5574505,SRR5574504,SRR5574503 of study SRP107170.

text: uncultured Bacteroidales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: MGG31274_1680015427

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Gut

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Muribaculaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG31282_1680015433


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: Gut

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Bacteroidales bacterium

characteristic: organism

text: uncultured Bacteroidales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: MGG31306_1680015468

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Gut

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG31310_1680015427


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP107170. This sample represents a Metagenome-assembled genome from the metagenomic runs SRR5574506,SRR5574507,SRR5574508.

text: Gut

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Eggerthellaceae bacterium

characteristic: organism

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs SRR5574506,SRR5574507,SRR5574508 of study SRP107170.

text: uncultured Eggerthellaceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: MGG31329_1680015499

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Gut

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Vampirovibrio sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Vampirovibrio sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG31387_1680015497


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP107170. This sample represents a Metagenome-assembled genome from the metagenomic runs SRR5574512,SRR5574513,SRR5574514.

text: Gut

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Eubacterium sp.

characteristic: organism

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs SRR5574512,SRR5574513,SRR5574514 of study SRP107170.

text: uncultured Eubacterium sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: MGG31469_1680015483

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Gut

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG31479_1680015476


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP159007. This sample represents a Metagenome-assembled genome from the metagenomic runs SRR7761320,SRR7762558.

text: Gut

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Oscillibacter sp.

characteristic: organism

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs SRR7761320,SRR7762558 of study SRP159007.

text: uncultured Oscillibacter sp.

text: NextSeq 500,Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: MGG31641_1680015452

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP159007. This sample represents a Metagenome-assembled genome from the metagenomic runs SRR7761325,SRR7762554.

characteristic: description

text: Gut

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Muribaculaceae bacterium

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs SRR7761325,SRR7762554 of study SRP159007.

characteristic: project name

characteristic: sample derived from

text: uncultured Muribaculaceae bacterium

text: NextSeq 500,Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG31702_1680015514


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: Gut

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Oscillospiraceae bacterium

characteristic: organism

text: uncultured Oscillospiraceae bacterium

text: NextSeq 500,Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: MGG31704_1680015513

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP159007. This sample represents a Metagenome-assembled genome from the metagenomic runs SRR7761326,SRR7762552.

characteristic: description

text: Gut

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Oscillospiraceae bacterium

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs SRR7761326,SRR7762552 of study SRP159007.

characteristic: project name

characteristic: sample derived from

text: uncultured Oscillospiraceae bacterium

text: NextSeq 500,Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG31721_1680015487


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF GENEVA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: Host-associated

characteristic: collection date

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP159007. This sample represents a Metagenome-assembled genome from the metagenomic runs SRR7761329,SRR7762551.

text: Gut

text: not provided

text: metagenome-assembled genome

text: mouse gut metagenome

text: Mouse digestive system

text: mouse gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs SRR7761329,SRR7762551 of study SRP159007.

text: uncultured Lachnospiraceae bacterium

text: NextSeq 500,Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: MGG31768_1680015443

characteristic: title


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF GENEVA

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

text: Host-associated

characteristic: broad-scale environmental context

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP199810. This sample represents a Metagenome-assembled genome from the metagenomic runs SRR9157333,SRR9157334,SRR9157337.

characteristic: description

text: Colon

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: Mouse digestive system

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Muribaculaceae bacterium

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from themetagenomic runs SRR9157333,SRR9157334,SRR9157337 of study SRP199810.

characteristic: project name

characteristic: sample derived from

text: uncultured Muribaculaceae bacterium

text: Illumina MiSeq

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: MGG31862_1680015503


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LSHTM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: malaria parasite P. falciparum

characteristic: common name

text: Plasmodium falciparum

characteristic: organism

text: Plasmodium falciparum

characteristic: title


T-B

text: LSHTM

text: public

text: T-B

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum

text: T-B


text: public

tag: Namespace:West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Scotland

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


text: Instituto Nacional de Saude Doutor Ricardo Jorge I.P. (INSA) - Portugal

characteristic: CENTER NAME

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE

characteristic: Submitter Id

characteristic: TITLE

text: not provided

text: not provided

characteristic: common name

text: Portugal

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

characteristic: organism

characteristic: title


text: NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE

text: public

text: not provided

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: Portugal

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:University of Copenhagen

text: not provided

text: Phage F341 resistant Campylobacter jejuni NCTC12658 LJ1 variant

characteristic: description

text: not provided

text: Campylobacter jejuni

text: Campylobacter jejuni

text: LJ1 variant


text: University of Copenhagen

text: public

characteristic: Submitter Id

text: not provided

characteristic: collection date

text: Phage F341 resistant Campylobacter jejuni NCTC12658 LJ6 variant

text: not provided

characteristic: geographic location (country and/or sea)

text: Campylobacter jejuni

characteristic: organism

text: Campylobacter jejuni

text: LJ6 variant

characteristic: title


text: University of Copenhagen

text: public

text: not provided

text: Phage F341 resistant Campylobacter jejuni NCTC12658 LJ8 variant

text: not provided

text: Campylobacter jejuni

text: Campylobacter jejuni

text: LJ8 variant


text: University of Copenhagen

text: public

text: not provided

text: Phage F341 resistant Campylobacter jejuni NCTC12658 LJ9 variant

text: not provided

text: Campylobacter jejuni

text: Campylobacter jejuni

text: LJ9 variant


text: University of Copenhagen

text: public

text: not provided

text: Phage F341 resistant Campylobacter jejuni NCTC12658 LJ10 variant

text: not provided

text: Campylobacter jejuni

text: Campylobacter jejuni

text: LJ10 variant


text: University of Copenhagen

text: public

text: not provided

text: Phage F341 resistant Campylobacter jejuni NCTC12658 LJ11 variant

text: not provided

text: Campylobacter jejuni

text: Campylobacter jejuni

text: LJ11 variant


text: University of Copenhagen

text: public

text: not provided

text: Phage F341 resistant Campylobacter jejuni NCTC12658 LJ13 variant

text: not provided

text: Campylobacter jejuni

text: Campylobacter jejuni

text: LJ13 variant


text: UBO

text: public

text: mediterranean sea biome

characteristic: broad-scale environmental context

text: environmental metagenomic data

text: biofilm material

characteristic: environmental medium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: France : Banyuls-sur-Mer Bay, North-Western Mediterranean Sea, eastern French

characteristic: geographic location, country and/or sea

text: Artificial environment

characteristic: local environmental context

text: plastisphere metagenome

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample PEO_3j


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UBO

characteristic: INSDC center name

text: public

text: mediterranean sea biome

text: environmental metagenomic data

text: biofilm material

text: Artificial environment

text: plastisphere metagenome

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample PEO_10j


text: UBO

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: mediterranean sea biome

text: environmental metagenomic data

characteristic: description

text: biofilm material

text: Artificial environment

text: plastisphere metagenome

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample PEO_31j


text: UBO

text: public

characteristic: Submitter Id

text: mediterranean sea biome

characteristic: collection date

text: environmental metagenomic data

text: biofilm material

text: Artificial environment

text: plastisphere metagenome

characteristic: organism

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample PEO_74j

characteristic: title


text: UBO

text: public

text: mediterranean sea biome

characteristic: broad-scale environmental context

text: environmental metagenomic data

text: biofilm material

characteristic: environmental medium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Artificial environment

text: plastisphere metagenome

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample PEO_116j


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UBO

text: public

text: mediterranean sea biome

text: environmental metagenomic data

text: biofilm material

characteristic: geographic location, country and/or sea

text: Artificial environment

characteristic: local environmental context

text: plastisphere metagenome

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample PEO_206j


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UBO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: mediterranean sea biome

text: environmental metagenomic data

text: biofilm material

text: Artificial environment

text: plastisphere metagenome

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample PCL_3j


text: UBO

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: mediterranean sea biome

text: environmental metagenomic data

characteristic: description

text: biofilm material

text: Artificial environment

text: plastisphere metagenome

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample PCL_10j


text: UBO

text: public

characteristic: Submitter Id

text: mediterranean sea biome

characteristic: collection date

text: environmental metagenomic data

text: biofilm material

text: Artificial environment

text: plastisphere metagenome

characteristic: organism

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample PCL_31j

characteristic: title


text: UBO

text: public

text: mediterranean sea biome

characteristic: broad-scale environmental context

text: environmental metagenomic data

text: biofilm material

characteristic: environmental medium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Artificial environment

text: plastisphere metagenome

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample PCL_116j


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UBO

text: public

text: mediterranean sea biome

text: environmental metagenomic data

text: biofilm material

characteristic: geographic location, country and/or sea

text: Artificial environment

characteristic: local environmental context

text: plastisphere metagenome

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample PCL_206j


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UBO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: mediterranean sea biome

text: environmental metagenomic data

text: biofilm material

text: Artificial environment

text: plastisphere metagenome

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample OXO_3j


text: UBO

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: mediterranean sea biome

text: environmental metagenomic data

characteristic: description

text: biofilm material

text: Artificial environment

text: plastisphere metagenome

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample OXO_10j


text: UBO

text: public

characteristic: Submitter Id

text: mediterranean sea biome

characteristic: collection date

text: environmental metagenomic data

text: biofilm material

text: Artificial environment

text: plastisphere metagenome

characteristic: organism

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample OXO_31j

characteristic: title


text: UBO

text: public

text: mediterranean sea biome

characteristic: broad-scale environmental context

text: environmental metagenomic data

text: biofilm material

characteristic: environmental medium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Artificial environment

text: plastisphere metagenome

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample OXO_74j


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UBO

text: public

text: mediterranean sea biome

text: environmental metagenomic data

text: biofilm material

characteristic: geographic location, country and/or sea

text: Artificial environment

characteristic: local environmental context

text: plastisphere metagenome

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample OXO_116j


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UBO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: mediterranean sea biome

text: environmental metagenomic data

text: biofilm material

text: Artificial environment

text: plastisphere metagenome

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample OXO_206j


text: UBO

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: mediterranean sea biome

text: environmental metagenomic data

characteristic: description

text: biofilm material

text: Artificial environment

text: plastisphere metagenome

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample PHBV_3j


text: UBO

text: public

characteristic: Submitter Id

text: mediterranean sea biome

characteristic: collection date

text: environmental metagenomic data

text: biofilm material

text: Artificial environment

text: plastisphere metagenome

characteristic: organism

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample PHBV_10j

characteristic: title


text: UBO

text: public

text: mediterranean sea biome

characteristic: broad-scale environmental context

text: environmental metagenomic data

text: biofilm material

characteristic: environmental medium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Artificial environment

text: plastisphere metagenome

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample PHBV_31j


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UBO

text: public

text: mediterranean sea biome

text: environmental metagenomic data

text: biofilm material

characteristic: geographic location, country and/or sea

text: Artificial environment

characteristic: local environmental context

text: plastisphere metagenome

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample PHBV_116j


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UBO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: mediterranean sea biome

text: environmental metagenomic data

text: biofilm material

text: Artificial environment

text: plastisphere metagenome

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample Temoin_H2O_3j


text: UBO

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: mediterranean sea biome

text: environmental metagenomic data

characteristic: description

text: biofilm material

text: Artificial environment

text: plastisphere metagenome

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample Temoin_H2O_10j


text: UBO

text: public

characteristic: Submitter Id

text: mediterranean sea biome

characteristic: collection date

text: environmental metagenomic data

text: biofilm material

text: Artificial environment

text: plastisphere metagenome

characteristic: organism

text: plastisphere metagenome

text: MYCOPLAST metabarcoding sample Temoin_H2O_31j

characteristic: title


text: IRISA/Inria

text: public

text: Orderly assembly of 50 eBlock in 1 MaxiBlock and PCR selection

text: synthetic construct

text: synthetic construct


text: IRISA/Inria

text: public

text: Orderly assembly of 50 eBlock in 5 BigBlock and PCR selection

text: synthetic construct

text: synthetic construct


text: public

text: Haloferax strains were grown in Hv-YPC medium at 42�C under agitation to mid-exponential phase as described previously (Kn�ppel et al. 2020, 2021).

text: Haloferax volcanii DS2

text: Haloferax volcanii DS2

characteristic: strain

text: Haloferav volcanii wt total RNA replicate 1


characteristic: ENA-CHECKLIST

text: public

text: Haloferax volcanii DS2

text: Haloferax volcanii DS2

text: Haloferav volcanii wt total RNA replicate 2


characteristic: ENA-FIRST-PUBLIC

text: public

text: Haloferax volcanii DS2

text: Haloferax volcanii DS2

text: Markerless deletion of Haloferax volcanii KsgA (Hvo_2746) was obtained earlier using the pop-in/pop-out procedure as described in (Kn�ppel et al. 2021).

text: Haloferav volcanii dksga total RNA replicate 1


text: public

text: Haloferax volcanii DS2

text: Haloferax volcanii DS2

text: Haloferav volcanii dksga total RNA replicate 2


text: public

text: BN_WGS_EcdcId_823EEE09-6773-55EA-99A0-9E126ACB0CC6

tag: Namespace:European Centre for Disease Prevention and Control

text: Netherlands

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: not provided

text: Escherichia coli

text: Escherichia coli

text: European study of Escherichia coli carrying blaNDM-5 based on national whole genome sequencing data from 13 European Union / European Economic Area countries, 2012-2022


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: European Centre for Disease Prevention and Control

characteristic: INSDC center name

text: public

text: BN_WGS_EcdcId_6DD4CC76-C8F1-54E0-979C-1F442176FE3F

text: Netherlands

text: not provided

text: Homo sapiens

text: urine

text: Escherichia coli

text: Escherichia coli


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: BN_WGS_EcdcId_9EE0A5B1-08A3-5685-8A39-3E39167E435C

text: Netherlands

text: not provided

text: Homo sapiens

text: not provided

text: Escherichia coli

text: Escherichia coli


text: public

characteristic: SRA accession

text: BN_WGS_EcdcId_EE44B563-4E5B-51DE-8269-01894EAC859F

characteristic: Submitter Id

text: Netherlands

text: not provided

text: Homo sapiens

text: not provided

text: Escherichia coli

text: Escherichia coli


text: Anthony Smith, NICD

text: public

tag: Namespace:Anthony Smith, NICD

text: EnteroBase

characteristic: broker name

text: EnteroBase

text: A. Smith, National Institute for Communicable Diseases

characteristic: collection date

text: Whole genome sequencing data uploaded by EnteroBase user

characteristic: description

text: South Africa, Gauteng

characteristic: geographic location

text: Human, Blood culture

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Heidelberg

characteristic: serovar


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Western Cape

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Typhimurium

characteristic: strain

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Western Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Typhimurium


text: Anthony Smith, NICD

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, KwaZulu-Natal

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: sub species diarizonae


text: Anthony Smith, NICD

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: EnteroBase

text: EnteroBase

text: South Africa, Gauteng

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis


text: Anthony Smith, NICD

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: EnteroBase

text: EnteroBase

text: South Africa, Eastern Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis


text: Anthony Smith, NICD

text: public

text: EnteroBase

characteristic: broker name

text: EnteroBase

characteristic: collection date

text: South Africa, Gauteng

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: sub species salamae


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

characteristic: description

text: South Africa, Free State

characteristic: geographic location

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Hadar


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, Gauteng

text: Human, Blood culture

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Enteritidis

characteristic: serovar


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa, North West

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: sub species salamae


text: public

text: BN_WGS_EcdcId_DCA93032-EF9C-511C-8B1C-5A2D036A4F7C

text: Netherlands

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: not provided

text: Escherichia coli

text: Escherichia coli

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: BN_WGS_EcdcId_52E93D1C-787D-5D66-A7A7-79249E58F455

text: Netherlands

text: not provided

text: Homo sapiens

text: not provided

text: Escherichia coli

text: Escherichia coli


text: public

characteristic: INSDC status

characteristic: SRA accession

text: BN_WGS_EcdcId_410C7CBC-13C9-55E0-972F-B1D6735D6254

characteristic: Submitter Id

characteristic: collection date

text: Netherlands

text: not provided

text: Homo sapiens

text: not provided

text: Escherichia coli

text: Escherichia coli


text: public

text: BN_WGS_EcdcId_8CDF5B43-1646-5DCB-961E-CDAFA0A968FD

text: Netherlands

text: not provided

text: Homo sapiens

text: not provided

text: Escherichia coli

characteristic: organism

text: Escherichia coli


characteristic: ENA-CHECKLIST

text: public

text: BN_WGS_EcdcId_0F7F44C3-E9A2-5C40-833B-C5BFD052477B

text: Netherlands

text: not provided

text: Homo sapiens

text: not provided

text: Escherichia coli

text: Escherichia coli


characteristic: ENA-FIRST-PUBLIC

text: public

text: BN_WGS_EcdcId_2CEA30B6-E71F-58DF-BE27-07188654856A

text: Netherlands

text: not provided

text: Homo sapiens

text: not provided

text: Escherichia coli

text: Escherichia coli


text: public

text: BN_WGS_EcdcId_01E825D4-623B-5B57-B044-38AD6C439CDB

text: Netherlands

characteristic: geographic location (country and/or sea)

text: not provided

text: Homo sapiens

text: not provided

text: Escherichia coli

text: Escherichia coli


text: public

text: BN_WGS_EcdcId_21CC1987-A39B-5D30-AEA0-76E36F426BE1

text: Netherlands

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: Escherichia coli

text: Escherichia coli


text: public

text: BN_WGS_EcdcId_0F44E501-3A8C-55B4-A9BE-41FAA1B3BBC5

text: Netherlands

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: Escherichia coli

text: Escherichia coli


text: public

text: BN_WGS_EcdcId_1275EF9E-FFD2-5DAD-8986-3B5C76EC0A7A

text: Netherlands

text: not provided

text: Homo sapiens

characteristic: isolate

text: not provided

text: Escherichia coli

text: Escherichia coli


text: public

text: BN_WGS_EcdcId_1C40DE31-A2A3-5F52-AF46-CCE03BA28E7A

text: Netherlands

text: not provided

text: Homo sapiens

text: not provided

text: Escherichia coli

text: Escherichia coli

text: European study of Escherichia coli carrying blaNDM-5 based on national whole genome sequencing data from 13 European Union / European Economic Area countries, 2012-2022

characteristic: title


characteristic: ENA-LAST-UPDATE

text: European Centre for Disease Prevention and Control

text: public

text: BN_WGS_EcdcId_3C70C14E-60DF-5EA4-91B6-EDDF90F05653

text: Netherlands

text: not provided

text: Homo sapiens

text: urine

text: Escherichia coli

text: Escherichia coli


characteristic: External Id

text: public

text: BN_WGS_EcdcId_02C8147B-2427-5E12-B845-83B27DC0F8B1

text: Netherlands

text: not provided

text: Homo sapiens

text: not provided

text: Escherichia coli

text: Escherichia coli


characteristic: INSDC center name

text: public

text: BN_WGS_EcdcId_182F5291-9512-5E2E-9F1F-55DD6A9DB6EF

text: Netherlands

text: not provided

text: Homo sapiens

text: not provided

text: Escherichia coli

text: Escherichia coli