characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Munich_Feces.117_1677664271

characteristic: title


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run ERR990523 of study ERP011836.

text: feces

text: Germany

characteristic: geographic location (country and/or sea)

unit: DD

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Christensenella sp.

text: The mouse intestinal bacterial collection (miBC) represents a unique resource of cultivable bacteria isolates from mice that enables engineering of minimal gut consortia.

text: uncultured Christensenella sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Munich_Feces.118_1677664272


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Muribaculaceae bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Muribaculaceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Munich_Feces.119_1677664272

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM

text: feces

text: Germany

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Lachnospiraceae bacterium

text: Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Munich_Feces.122_1677664272


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Munich_Feces.123_1677664274

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM

text: feces

text: Germany

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Porphyromonadaceae bacterium UBA7222

text: Porphyromonadaceae bacterium UBA7222

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Munich_Feces.126_1677664275


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Porphyromonadaceae bacterium UBA7167

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Porphyromonadaceae bacterium UBA7167

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Munich_Feces.134_1677664275

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM

text: feces

text: Germany

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Clostridia bacterium

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Munich_Feces.139_1677664275


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Christensenella sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Christensenella sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Munich_Feces.140_1677664276

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM

text: feces

text: Germany

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Parabacteroides distasonis ATCC 8503

text: Parabacteroides distasonis ATCC 8503

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Munich_Feces.142_1677664276


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Bacteroidales bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Bacteroidales bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Munich_Feces.147_1677664276

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM

text: feces

text: Germany

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Alistipes sp. UBA6068

text: Alistipes sp. UBA6068

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Munich_Feces.148_1677664276


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Muribaculaceae bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Muribaculaceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Munich_Feces.150_1677664277

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM

text: feces

text: Germany

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: bacterium 1xD42-87

text: bacterium 1xD42-87

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Munich_Feces.154_1677664277


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Muribaculaceae bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Munich_Feces.156_1677664277

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM

text: feces

text: Germany

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Oscillospiraceae bacterium

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Munich_Feces.157_1677664277


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run ERR990523 of study ERP011836.

characteristic: description

text: feces

characteristic: environmental medium

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Porphyromonadaceae bacterium UBA3317

characteristic: organism

text: The mouse intestinal bacterial collection (miBC) represents a unique resource of cultivable bacteria isolates from mice that enables engineering of minimal gut consortia.

characteristic: project name

characteristic: sample derived from

text: Porphyromonadaceae bacterium UBA3317

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Munich_Feces.165_1677664278

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM

text: feces

text: Germany

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Christensenella sp.

text: uncultured Christensenella sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Munich_Feces.168_1677664280


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Parasutterella sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Parasutterella sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Munich_Feces.173_1677664280

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM

text: feces

text: Germany

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Muribaculaceae bacterium

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Munich_Feces.174_1677664280


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Alistipes sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Alistipes sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Munich_Feces.175_1677664281

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM

text: feces

text: Germany

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Lachnospiraceae bacterium

text: Lachnospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Munich_Feces.177_1677664282


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Lachnospiraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Munich_Feces.178_1677664282

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM

text: feces

text: Germany

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Oscillospiraceae bacterium

text: uncultured Oscillospiraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Munich_Feces.179_1677664283


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Rikenellaceae bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Rikenellaceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Munich_Feces.181_1677664283

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM

text: feces

text: Germany

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Duncaniella freteri

text: Duncaniella freteri

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Munich_Feces.183_1677664283


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: Porphyromonadaceae bacterium UBA3321

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Porphyromonadaceae bacterium UBA3321

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Munich_Feces.184_1677664284

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM

text: feces

text: Germany

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: uncultured Muribaculaceae bacterium

text: uncultured Muribaculaceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Munich_Feces.186_1677664284


characteristic: ENA-CHECKLIST

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

text: public

text: metaSPAdes

text: default

text: mouse digestive system

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: feces

characteristic: environmental medium

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: mouse gut metagenome

text: mouse gut

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Christensenellaceae bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: Munich_Feces.187_1677664284

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HELMHOLTZ CENTRE FOR INFECTION RESEARCH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: mouse digestive system

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run ERR990522 of study ERP011836.

text: feces

text: Germany

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: mouse gut metagenome

text: mouse gut

text: mouse gut metagenome

text: Ligilactobacillus murinus

text: Ligilactobacillus murinus

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: Munich_Ileum.1_1677664285


characteristic: ENA-CHECKLIST

text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

unit: year

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status

text: hCoV-19/Ireland/CE-NVRL-SIRL00008797/2023

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

characteristic: geographic location (country and/or sea)

text: Europe / Ireland / Clare

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CE-NVRL-SIRL00008787/2023


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CE-NVRL-SIRL00009574/2023

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

text: Europe / Ireland / Clare

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CE-NVRL-SIRL00010486/2023

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CN-NVRL-SIRL00008676/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

text: Europe / Ireland / Cavan

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CN-NVRL-SIRL00008831/2023

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/CN-NVRL-SIRL00008823/2023

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

text: Europe / Ireland / Carlow

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/CW-NVRL-SIRL00009639/2023


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/CW-NVRL-SIRL00010224/2023

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

text: Europe / Ireland / Carlow

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CW-NVRL-SIRL00010134/2023

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/CW-NVRL-SIRL00010005/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

text: Europe / Ireland / Carlow

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CW-NVRL-SIRL00010231/2023

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/CW-NVRL-SIRL00010619/2023

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-SIRL00009262/2023


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-SIRL00009153/2023

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

text: hCoV-19/Ireland/D-NVRL-SIRL00009120/2023

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-SIRL00009119/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-SIRL00009147/2023

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-SIRL00009145/2023

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-SIRL00009208/2023


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-SIRL00009224/2023

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-SIRL00009122/2023

characteristic: virus identifier


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-SIRL00009268/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-SIRL00009236/2023

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-SIRL00009238/2023

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Irish Consortium for Sequencing Covid

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-SIRL00009226/2023


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

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characteristic: virus identifier


text: NVRL

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text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

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text: Ireland

characteristic: geographic location (country and/or sea)

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text: Europe / Ireland / Dublin

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text: NVRL

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text: National Virus Reference Laboratory

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text: NVRL

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

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characteristic: virus identifier


text: NVRL

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text: National Virus Reference Laboratory

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text: Europe / Ireland / Dublin

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characteristic: title


text: NVRL

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text: National Virus Reference Laboratory

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text: Europe / Ireland / Dublin

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text: hCoV-19/Ireland/D-NVRL-SIRL00008799/2023


text: NVRL

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

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text: Europe / Ireland / Dublin

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text: Europe / Ireland / Dublin

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characteristic: virus identifier


text: NVRL

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

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text: Europe / Ireland / Dublin

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text: hCoV-19/Ireland/D-NVRL-SIRL00008830/2023


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text: hCoV-19/Ireland/D-NVRL-SIRL00008806/2023

characteristic: title


text: NVRL

text: public

text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

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text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

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text: Europe / Ireland / Dublin

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text: NVRL

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text: National Virus Reference Laboratory

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text: Europe / Ireland / Dublin

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characteristic: virus identifier


text: NVRL

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

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characteristic: title


text: NVRL

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text: National Virus Reference Laboratory

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text: Europe / Ireland / Dublin

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text: hCoV-19/Ireland/D-NVRL-SIRL00009018/2023


text: NVRL

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

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text: Europe / Ireland / Dublin

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text: hCoV-19/Ireland/D-NVRL-SIRL00008975/2023

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text: NVRL

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text: Irish Consortium for Sequencing Covid

text: National Virus Reference Laboratory

text: not provided

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text: Europe / Ireland / Dublin

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characteristic: title


text: NVRL

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

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text: hCoV-19/Ireland/D-NVRL-SIRL00008970/2023


text: NVRL

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text: Europe / Ireland / Dublin

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characteristic: virus identifier


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characteristic: title


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characteristic: virus identifier