text: IOA

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: green mud crab

characteristic: common name

text: China

text: Jiantiao harbour

text: Scylla paramamosain

text: Zs

text: Scylla paramamosain

text: female

text: Muscle (claw)


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IOA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: green mud crab

text: China

characteristic: geographic location (country and/or sea)

text: Jiantiao harbour

characteristic: geographic location (region and locality)

characteristic: height

characteristic: length

text: Scylla paramamosain

characteristic: organism

text: Zs

characteristic: population

text: Scylla paramamosain

text: male

characteristic: sex

text: Muscle (claw)

characteristic: title

characteristic: weight

characteristic: width


text: IOA

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: green mud crab

characteristic: common name

text: China

text: Moonlight dock

text: Scylla paramamosain

text: Zw

text: Scylla paramamosain

text: female

text: Muscle (claw)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IOA

characteristic: INSDC center name

text: public

text: green mud crab

text: China

text: Moonlight dock

text: Scylla paramamosain

text: Zw

text: Wrong species: S. olivacea

characteristic: remark

text: Scylla paramamosain

text: male

text: Muscle (claw)


text: IOA

characteristic: INSDC first public

text: public

text: green mud crab

text: China

characteristic: geographic location (country and/or sea)

text: Moonlight dock

characteristic: geographic location (region and locality)

characteristic: height

characteristic: length

text: Scylla paramamosain

characteristic: organism

text: Zw

text: Potential introgressed individual

text: Scylla paramamosain

text: male

text: Muscle (claw)


text: IOA

characteristic: INSDC last update

text: public

text: green mud crab

text: China

text: Moonlight dock

text: Scylla paramamosain

text: Zw

characteristic: population

text: Scylla paramamosain

text: male

characteristic: sex

text: Muscle (claw)

characteristic: title

characteristic: weight

characteristic: width


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: IOA

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: giant mud crab

characteristic: common name

text: India

text: Chilika Lake

text: Scylla serrata

text: J

text: Scylla serrata

text: female

text: Muscle (claw)


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IOA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: purple mud crab

text: Malaysia

characteristic: geographic location (country and/or sea)

text: Kuala Ibai

text: Scylla tranquebarica

text: Z

text: Scylla tranquebarica

text: female

text: Muscle (claw)


text: IOA

characteristic: INSDC last update

text: public

text: purple mud crab

text: Malaysia

text: Kuala Ibai

characteristic: geographic location (region and locality)

text: Scylla tranquebarica

characteristic: organism

text: Z

text: Scylla tranquebarica

text: male

text: Muscle (claw)


text: IOA

text: public

text: purple mud crab

text: Malaysia

text: Kuala Ibai

text: Scylla tranquebarica

text: Z

characteristic: population

text: Wrong species: S. serrata

characteristic: remark

text: Scylla tranquebarica

text: male

characteristic: sex

text: Muscle (claw)

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: IOA

text: public

text: orange mud crab

text: Malaysia

text: Kedah

text: Scylla olivacea

text: M

text: Scylla olivacea

text: female

text: Muscle (claw)


text: IOA

text: public

characteristic: INSDC status

characteristic: SRA accession

text: orange mud crab

text: Malaysia

text: Kedah

text: Scylla olivacea

text: M

text: Scylla olivacea

text: male

text: Muscle (claw)


text: ZOOLOGICAL INSTITUTE KIEL

text: public

tag: Namespace:ZOOLOGICAL INSTITUTE KIEL

characteristic: Submitter Id

characteristic: collection date

text: bacteria

characteristic: common name

text: natural worm

characteristic: description

text: rotten substrate

characteristic: environmental medium

text: Yes

characteristic: environmental sample

text: Germany

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Kiel

text: C. elegans

characteristic: isolation source

text: compost

characteristic: local environmental context

text: metagenome

text: 341F, 806R

characteristic: pcr primers

text: metagenome

text: 16S rRNA gene

characteristic: target gene

characteristic: target subfragment

text: worms


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF NEUCHATEL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:UNIVERSITY OF NEUCHATEL

text: chromosome-level assembly and gene annotation of world distributed Zymoseptoria tritici isolates

text: cultivated crops

characteristic: environment (biome)

text: wheat leaf

characteristic: environment (feature)

text: plant matter

characteristic: environment (material)

characteristic: estimated size

text: Argentina

characteristic: geographic location (country and/or sea)

text: -73.59 -58.41

text: -52.63 -21.78

text: eukaryote

characteristic: investigation type

text: Zymoseptoria tritici

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: ploidy

text: A global pangenome for the fungal wheat pathogen Zymoseptoria tritici

characteristic: project name

text: Zymoseptoria tritici

text: PacBio Sequel

characteristic: sequencing method

text: ST00Arg_1D1a1 genome assembly

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF NEUCHATEL

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: cultivated crops

text: wheat leaf

text: plant matter

text: Australia

text: 93.41 -60.56

characteristic: geographic location (latitude)

text: 173.35 -8.47

characteristic: geographic location (longitude)

text: eukaryote

text: Zymoseptoria tritici

text: plant-associated

text: Zymoseptoria tritici

text: PacBio Sequel

text: ST01Aus_1H8 genome assembly


characteristic: External Id

text: UNIVERSITY OF NEUCHATEL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: cultivated crops

characteristic: environment (biome)

text: wheat leaf

characteristic: environment (feature)

text: plant matter

characteristic: environment (material)

characteristic: estimated size

text: Chile

characteristic: geographic location (country and/or sea)

text: -113.21 -59.87

text: -65.72 -17.5

text: eukaryote

characteristic: investigation type

text: Zymoseptoria tritici

text: plant-associated

text: Zymoseptoria tritici

text: PacBio Sequel

text: ST95CH_3B2a genome assembly


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF NEUCHATEL

text: public

characteristic: INSDC status

text: cultivated crops

text: wheat leaf

text: plant matter

text: Canada

text: -172.54 23.81

text: -47.74 86.46

text: eukaryote

text: Zymoseptoria tritici

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: ploidy

characteristic: project name

text: Zymoseptoria tritici

text: PacBio Sequel

characteristic: sequencing method

text: ST93CNR_D3a1 genome assembly

characteristic: title


characteristic: External Id

text: UNIVERSITY OF NEUCHATEL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: cultivated crops

text: wheat leaf

text: plant matter

text: Czech Republic

text: 12.09 47.73

characteristic: geographic location (latitude)

text: 22.56 51.06

characteristic: geographic location (longitude)

text: eukaryote

text: Zymoseptoria tritici

text: plant-associated

text: Zymoseptoria tritici

text: PacBio Sequel

text: ST10CRI_0616 genome assembly


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF NEUCHATEL

text: public

characteristic: INSDC status

text: cultivated crops

characteristic: environment (biome)

text: wheat leaf

characteristic: environment (feature)

text: plant matter

characteristic: environment (material)

characteristic: estimated size

text: USA

characteristic: geographic location (country and/or sea)

text: -88.06 37.77

text: -86.24 41.77

text: eukaryote

characteristic: investigation type

text: Zymoseptoria tritici

text: plant-associated

text: Zymoseptoria tritici

text: PacBio Sequel

text: ST93I_11a_2 genome assembly


characteristic: External Id

text: UNIVERSITY OF NEUCHATEL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: cultivated crops

text: wheat leaf

text: plant matter

text: Iran

text: 44.03 23.34

text: 63.34 39.78

text: eukaryote

text: Zymoseptoria tritici

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: ploidy

characteristic: project name

text: Zymoseptoria tritici

text: PacBio Sequel

characteristic: sequencing method

text: ST01IR_26b genome assembly

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF NEUCHATEL

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: cultivated crops

text: wheat leaf

text: plant matter

text: Iran

text: 44.03 23.34

characteristic: geographic location (latitude)

text: 63.34 39.78

characteristic: geographic location (longitude)

text: eukaryote

text: Zymoseptoria tritici

text: plant-associated

text: Zymoseptoria tritici

text: PacBio Sequel

text: ST01IR_48b genome assembly


characteristic: External Id

text: UNIVERSITY OF NEUCHATEL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: cultivated crops

characteristic: environment (biome)

text: wheat leaf

characteristic: environment (feature)

text: plant matter

characteristic: environment (material)

characteristic: estimated size

text: Israel

characteristic: geographic location (country and/or sea)

text: 34.17 29.45

text: 35.69 33.28

text: eukaryote

characteristic: investigation type

text: Zymoseptoria tritici

text: plant-associated

text: Zymoseptoria tritici

text: PacBio Sequel

text: ST92ISY_Ar_4f genome assembly


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF NEUCHATEL

text: public

characteristic: INSDC status

text: cultivated crops

text: wheat leaf

text: plant matter

text: Kenya

text: 29.34 -11.75

text: 41.91 4.63

text: eukaryote

text: Zymoseptoria tritici

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: ploidy

characteristic: project name

text: Zymoseptoria tritici

text: PacBio Sequel

characteristic: sequencing method

text: ST94KE_MF1a genome assembly

characteristic: title


characteristic: External Id

text: UNIVERSITY OF NEUCHATEL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: cultivated crops

text: wheat leaf

text: plant matter

text: USA

text: -172.54 23.81

characteristic: geographic location (latitude)

text: 47.74 86.46

characteristic: geographic location (longitude)

text: eukaryote

text: Zymoseptoria tritici

text: plant-associated

text: Zymoseptoria tritici

text: PacBio Sequel

text: ST90Oreg_a15_4A_10 genome assembly


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF NEUCHATEL

text: public

characteristic: INSDC status

text: cultivated crops

characteristic: environment (biome)

text: wheat leaf

characteristic: environment (feature)

text: plant matter

characteristic: environment (material)

characteristic: estimated size

text: Tunisia

characteristic: geographic location (country and/or sea)

text: 7.49 30.23

text: 13.67 38.41

text: eukaryote

characteristic: investigation type

text: Zymoseptoria tritici

text: plant-associated

text: Zymoseptoria tritici

text: PacBio Sequel

text: ST09TN_26_2_0 genome assembly


characteristic: External Id

text: UNIVERSITY OF NEUCHATEL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: cultivated crops

text: wheat leaf

text: plant matter

text: Ukraine

text: 37.5 46.77

text: 40.18 50.39

text: eukaryote

text: Zymoseptoria tritici

characteristic: organism

text: plant-associated

characteristic: plant-associated environmental package

characteristic: ploidy

characteristic: project name

text: Zymoseptoria tritici

text: PacBio Sequel

characteristic: sequencing method

text: ST95UR_E2C_2 genome assembly

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF NEUCHATEL

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: cultivated crops

text: wheat leaf

text: plant matter

text: Yemen

text: 41.08 8.95

characteristic: geographic location (latitude)

text: 57.96 19.0

characteristic: geographic location (longitude)

text: eukaryote

text: Zymoseptoria tritici

text: plant-associated

text: Zymoseptoria tritici

text: PacBio Sequel

text: ST92YEQ_4 genome assembly


characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pyricularia oryzae 70-15

text: Pyricularia oryzae 70-15


text: public

tag: Namespace:German Federal Institute for Risk Assessment

text: Listeria innocua

characteristic: common name

text: Egypt

characteristic: geographic location (country and/or sea)

characteristic: isolate

text: food

characteristic: isolation source

text: Listeria innocua

characteristic: organism

text: Listeria innocua

text: Listeria in poultry processing


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: German Federal Institute for Risk Assessment

text: public

text: Listeria innocua

text: Egypt

text: animal

text: Listeria innocua

text: Listeria innocua

text: Listeria in poultry processing

characteristic: title


text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Listeria innocua

text: Egypt

text: food

text: Listeria innocua

text: Listeria innocua

text: Listeria in poultry processing


characteristic: External Id

text: public

text: Listeria innocua

text: Egypt

text: environment

text: Listeria innocua

text: Listeria innocua

text: Listeria in poultry processing


characteristic: INSDC center name

text: public

tag: Namespace:NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE

text: Portugal

characteristic: country

text: Mycobacterium tuberculosis

text: MDR

characteristic: resistance profile

text: Mycobacterium tuberculosis

characteristic: year isolated


text: TECHNICAL UNIVERISITY OF DENMARK

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:TECHNICAL UNIVERISITY OF DENMARK

text: European eel

characteristic: common name

text: Anguilla anguilla

text: Anguilla anguilla

text: Ovary


text: IOA

text: public

text: salmon louse

text: Adult

text: Salmo salar

characteristic: host scientific name

text: Lepeophtheirus salmonis

characteristic: organism

text: Lepeophtheirus salmonis

text: Female

characteristic: sex

characteristic: strain

text: Control

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: IOA

text: public

characteristic: INSDC status

text: salmon louse

text: Adult

text: Salmo salar

text: Lepeophtheirus salmonis

text: Lepeophtheirus salmonis

text: Female

characteristic: title


characteristic: External Id

text: IOA

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: salmon louse

text: F1 - Family H3

characteristic: description

text: Adult

text: Salmo salar

text: Lepeophtheirus salmonis

text: Lepeophtheirus salmonis

text: Female

text: Control


text: IOA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: salmon louse

text: F1 - Family H3

text: Adult

text: Salmo salar

text: Lepeophtheirus salmonis

text: Lepeophtheirus salmonis

text: Female


text: IOA

text: public

text: salmon louse

characteristic: common name

text: F1 - Family H4

text: Adult

text: Salmo salar

characteristic: host scientific name

text: Lepeophtheirus salmonis

text: Lepeophtheirus salmonis

text: Female

text: Control


text: IOA

text: public

text: salmon louse

text: F1 - Family H4

text: Adult

text: Salmo salar

text: Lepeophtheirus salmonis

characteristic: organism

text: Lepeophtheirus salmonis

text: Female

characteristic: sex


text: IOA

text: public

text: salmon louse

text: Adult

text: Salmo salar

text: Lepeophtheirus salmonis

text: Lepeophtheirus salmonis

text: Male

characteristic: strain

text: Control

characteristic: treatment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: IOA

text: public

text: salmon louse

text: Adult

text: Salmo salar

text: Lepeophtheirus salmonis

text: Lepeophtheirus salmonis

text: Male


characteristic: ENA-LAST-UPDATE

text: IOA

text: public

characteristic: INSDC status

text: salmon louse

text: Adult

text: Salmo salar

text: Lepeophtheirus salmonis

text: Lepeophtheirus salmonis

text: Male

text: High concentration


characteristic: External Id

text: IOA

text: public

text: salmon louse

text: F1 - Family H3

text: Adult

text: Salmo salar

text: Lepeophtheirus salmonis

text: Lepeophtheirus salmonis

text: Male

characteristic: title

text: Control


text: IOA

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: salmon louse

text: F1 - Family H3

text: Adult

text: Salmo salar

text: Lepeophtheirus salmonis

text: Lepeophtheirus salmonis

text: Male


text: IOA

text: public

characteristic: Submitter Id

text: salmon louse

text: F1 - Family H4

characteristic: description

text: Adult

text: Salmo salar

text: Lepeophtheirus salmonis

text: Lepeophtheirus salmonis

text: Male

text: Control


text: IOA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: salmon louse

text: F1 - Family H4

text: Adult

text: Salmo salar

text: Lepeophtheirus salmonis

text: Lepeophtheirus salmonis

text: Male


text: UNIVERSIDAD DE BUENOS AIRES

text: public

tag: Namespace:UNIVERSIDAD DE BUENOS AIRES

characteristic: collection date

text: 16S rRNA amplicon analysis of Pozo Bravo Microbial Mat in Summer 2018

text: Saltern

characteristic: environment (biome)

text: high salinity

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Argentina

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

text: S 25°30'58.20''

characteristic: geographic location (latitude)

text: W 67°34'41.33''

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: microbial mat/biofilm

characteristic: microbial mat/biofilm environmental package

text: microbial mat metagenome

text: 16S rRNA amplicon analysis of Pozo Bravo Lake

characteristic: project name

text: microbial mat metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: Microbial Mat Summer 2018


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: THE ROSLIN INSTITUTE

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:THE ROSLIN INSTITUTE

characteristic: Submitter Id

text: cattle

characteristic: common name

text: Samples derived from immune cells isolated from peripheral blood

text: United Kingdom

text: Bos taurus

characteristic: organism

text: Bos taurus

text: Female

characteristic: sex

text: Blood

text: Holstein Friesian 3457

characteristic: title


text: THE ROSLIN INSTITUTE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: cattle

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Bos taurus

text: Bos taurus

text: Female

text: Blood

text: Holstein Friesian 3458


text: THE ROSLIN INSTITUTE

text: public

text: cattle

text: United Kingdom

text: Bos taurus

text: Bos taurus

text: Female

text: Blood

text: Holstein Friesian 3471


text: THE ROSLIN INSTITUTE

text: public

text: cattle

text: Kenya

text: Bos taurus

text: Bos taurus

text: Female

text: Blood

text: N'dama 230


text: THE ROSLIN INSTITUTE

text: public

text: cattle

text: Kenya

text: Bos taurus

text: Bos taurus

text: Female

text: Blood

text: N'dama 231


text: THE ROSLIN INSTITUTE

text: public

text: cattle

text: Kenya

text: Bos taurus

text: Bos taurus

text: Female

text: Blood

text: N'dama 234


text: THE ROSLIN INSTITUTE

text: public

text: zebu cattle

text: Brazil

text: Bos indicus

text: Bos indicus

text: Female

text: Blood

text: Nelore 1


text: THE ROSLIN INSTITUTE

text: public

text: zebu cattle

text: Brazil

text: Bos indicus

text: Bos indicus

text: Female

text: Blood

text: Nelore 2


text: THE ROSLIN INSTITUTE

text: public

text: zebu cattle

text: Brazil

text: Bos indicus

text: Bos indicus

text: Female

text: Blood

text: Nelore 3


Microbial Mat Fall 20171

text: UNIVERSIDAD DE BUENOS AIRES

text: public

text: Microbial Mat Fall 20171

characteristic: collection date

text: 16S rRNA amplicon analysis of Pozo Bravo Microbial Mat in Fall 2017

text: Saltern

characteristic: environment (biome)

text: High salinity

characteristic: environment (feature)

text: Soil

characteristic: environment (material)

text: Argentina

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

text: S 25°30'58.20''

characteristic: geographic location (latitude)

text: W 67°34'41.33''

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: microbial mat/biofilm

characteristic: microbial mat/biofilm environmental package

text: microbial mat metagenome

text: Microbial Mat Fall 2017

characteristic: project name

text: microbial mat metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: Microbial Mat Fall 2017


Microbial Mat Winter 20171

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSIDAD DE BUENOS AIRES

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Microbial Mat Winter 20171

characteristic: Submitter Id

text: 16S rRNA amplicon analysis of Pozo Bravo Microbial Mat in Winter 2017

text: Saltern

text: High salinity

text: Soil

text: Argentina

text: S 25°30'58.20''

text: W 67°34'41.33''

text: metagenome

text: microbial mat/biofilm

text: microbial mat metagenome

characteristic: organism

text: Microbial Mat Winter 2017

text: microbial mat metagenome

text: Illumina MiSeq

text: Microbial Mat Winter 2017

characteristic: title


Microbial Mat Spring 20171

text: UNIVERSIDAD DE BUENOS AIRES

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Microbial Mat Spring 20171

characteristic: collection date

text: 16S rRNA amplicon analysis of Pozo Bravo Microbial Mat in Spring 2017

characteristic: description

text: Saltern

characteristic: environment (biome)

text: High salinity

characteristic: environment (feature)

text: Soil

characteristic: environment (material)

text: Argentina

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

text: S 25°30'58.20''

text: W 67°34'41.33''

text: metagenome

text: microbial mat/biofilm

text: microbial mat metagenome

text: Microbial Mat Spring 2017

text: microbial mat metagenome

text: Illumina MiSeq

text: Microbial Mat Spring 2017


Water Summer 2018

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSIDAD DE BUENOS AIRES

text: public

text: Water Summer 2018

text: 16S rRNA amplicon analysis of Pozo Bravo Water in Summer 2017

text: Saltern

text: High salinity

text: water

text: Argentina

text: S 25°30'58.20''

characteristic: geographic location (latitude)

text: W 67°34'41.33''

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: metagenome

text: Water Summer 2018

characteristic: project name

text: metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: Water Summer 2018

text: water

characteristic: water environmental package


Water Fall 20171

text: UNIVERSIDAD DE BUENOS AIRES

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Water Fall 20171

characteristic: Submitter Id

characteristic: collection date

text: 16S rRNA amplicon analysis of Pozo Bravo Water in Fall 2017

characteristic: description

text: Saltern

text: high salinity

text: water

text: Argentina

text: S 25°30'58.20''

text: W 67°34'41.33''

text: metagenome

text: metagenome

characteristic: organism

text: Water Fall 2017

text: metagenome

text: Illumina Miseq

text: Water Fall 2017

characteristic: title

text: water


Water Winter 20171

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSIDAD DE BUENOS AIRES

text: public

text: Water Winter 20171

text: 16S rRNA amplicon analysis of Pozo Bravo Water in Winter 2017

text: Saltern

characteristic: environment (biome)

text: High salinity

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Argentina

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

text: S 25°30'58.20''

text: W 67°34'41.33''

text: metagenome

text: metagenome

text: Water Winter 2017

text: metagenome

text: Illumina MiSeq

text: Water Winter 2017

text: water


Water Spring 20171

text: UNIVERSIDAD DE BUENOS AIRES

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Water Spring 20171

text: 16S rRNA amplicon analysis of Pozo Bravo Water Spring 2017

text: Saltern

text: High salinity

text: water

text: Argentina

text: S 25°30'58.20''

characteristic: geographic location (latitude)

text: W 67°34'41.33''

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: metagenome

text: Water Spring 2017

characteristic: project name

text: metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: Water Spring 2017

text: water

characteristic: water environmental package


Microbialite Summer 20181

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSIDAD DE BUENOS AIRES

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Microbialite Summer 20181

characteristic: Submitter Id

characteristic: collection date

text: Saltern

text: High salinity

text: soil

text: Argentina

characteristic: geographic location (elevation)

text: S 25°30'58.20''

text: W 67°34'41.33''

text: metagenome

text: microbial mat/biofilm

characteristic: microbial mat/biofilm environmental package

text: metagenome

characteristic: organism

text: Microbialite Summer 2018

text: metagenome

text: Illumina MiSeq

text: Microbialite Summer 2018

characteristic: title


Microbialite Fall 20171

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSIDAD DE BUENOS AIRES

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Microbialite Fall 20171

text: Saltern

characteristic: environment (biome)

text: High salinity

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Argentina

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

text: S 25°30'58.20''

text: W 67°34'41.33''

text: metagenome

text: microbial mat/biofilm

text: metagenome

text: Microbialite Fall 2017

text: metagenome

text: Illumina MiSeq

text: Microbialite Fall 2017


Microbialite Winter 20171

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSIDAD DE BUENOS AIRES

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Microbialite Winter 20171

text: Saltern

text: High salinity

text: Soil

text: Argentina

text: S 25°30'58.20''

characteristic: geographic location (latitude)

text: W 67°34'41.33''

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: microbial mat/biofilm

text: metagenome

text: Microbialite Winter 2017

characteristic: project name

text: metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: Microbialite Winter 2017


Microbialite Spring 20171

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSIDAD DE BUENOS AIRES

characteristic: INSDC center name

text: public

text: Microbialite Spring 20171

characteristic: Submitter Id

characteristic: collection date

text: Saltern

text: High salinity

text: Soil

text: Argentina

characteristic: geographic location (elevation)

text: S 25°30'58.20''

text: W 67°34'41.33''

text: metagenome

text: microbial mat/biofilm

characteristic: microbial mat/biofilm environmental package

text: metagenome

characteristic: organism

text: Microbialite Spring 2017

text: metagenome

text: Illumina MiSeq

text: Microbialite Spring 2017

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Listeria monocytogenes

characteristic: common name

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: isolate

text: Food

characteristic: isolation source

text: Listeria monocytogenes

text: Listeria monocytogenes

text: Listeriosis outbreak linked to RTE meat products


characteristic: ENA-LAST-UPDATE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Listeria monocytogenes

text: Germany

text: Human Listeriosis

text: Listeria monocytogenes

text: Listeria monocytogenes


characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Listeria monocytogenes

text: Germany

text: Food Processing Environment

text: Listeria monocytogenes

text: Listeria monocytogenes


text: public

characteristic: collection date

text: Listeria monocytogenes

text: Germany

text: Listeria monocytogenes

text: Listeria monocytogenes


text: Cantacuzino NIMMRD

text: public

tag: Namespace:Cantacuzino NIMMRD

text: Romania

text: diseased

characteristic: host health state

text: Homosapiens

characteristic: host scientific name

text: feces

text: Escherichia coli O157:H7

characteristic: organism

text: Escherichia coli O157:H7

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Cantacuzino NIMMRD

characteristic: INSDC first public

text: public

text: Romania

text: diseased

text: Homo sapiens

text: feces

text: Escherichia coli O26:H11

text: Escherichia coli O26:H11

characteristic: serovar

characteristic: title


text: KAUST

characteristic: INSDC last update

text: public

text: Saudi Arabia

characteristic: geographic location (country and/or sea)

text: diseased

text: homo sapien

characteristic: isolate

text: Human Skin Biopsy

text: Mycobacterium leprae

text: Mycobacterium leprae


Lumpfish (pool)

characteristic: ENA-LAST-UPDATE

text: IOA

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Lumpfish (pool)

text: Lumpfish (pool)

characteristic: description

text: mixed sample

text: mixed sample

text: fin clip

text: Lumpfish (pool)


characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: Submitter Id

characteristic: collection date

text: Listeria monocytogenes

characteristic: common name

text: Germany

text: Food

characteristic: isolation source

text: Listeria monocytogenes

text: Listeria monocytogenes

text: Benchmarking of WGS typing methods for Listeria monocytogenes


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: Listeria monocytogenes

text: Germany

text: Environment

text: Listeria monocytogenes

characteristic: organism

text: Listeria monocytogenes


text: CBMSO

characteristic: INSDC first public

text: public

text: GENGS-CBMSO

characteristic: broker name

text: Sequences of a set of polyadenylated transcripts belonging to the protist Leishmania infantum (JPCM5 strain) that were determined by PacBio sequencing.

text: Leishmania infantum JPCM5

text: Leishmania infantum JPCM5

text: Characterization and annotation of Leishmania infantum (JPCM5 strain) transcript isoforms.

characteristic: title


text: CBMSO

characteristic: INSDC last update

text: public

text: GENGS-CBMSO

text: Raw reads of a set of polyadenylated transcripts belonging to the protist Leishmania infantum (JPCM5 strain) that were determined by PacBio sequencing.

text: Leishmania infantum JPCM5

text: Leishmania infantum JPCM5

text: Raw reads generated by Iso-seq method. Leishmania infantum JPCM5.


characteristic: ENA-LAST-UPDATE

text: CBMSO

text: public

text: GENGS-CBMSO

text: High quality (HQ) reads of a set of polyadenylated transcripts belonging to the protist Leishmania infantum (JPCM5 strain) that were determined by PacBio sequencing.

text: Leishmania infantum JPCM5

text: Leishmania infantum JPCM5

text: High quality reads generated by Iso-seq method. Leishmania infantum JPCM5.


text: The Kennel Club Genetics Centre

text: public

characteristic: INSDC status

tag: Namespace:The Kennel Club Genetics Centre

text: French Bulldog

characteristic: breed

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: French Bulldog WGS


text: The Kennel Club Genetics Centre

text: public

characteristic: SRA accession

text: German Wirehaired Pointer

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: German Wirehaired Pointer WGS


characteristic: External Id

text: The Kennel Club Genetics Centre

text: public

text: Italian Spinone

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Italian Spinone WGS


text: The Kennel Club Genetics Centre

characteristic: INSDC center name

text: public

text: Russian Black Terrier

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Russian Black Terrier WGS


text: The Kennel Club Genetics Centre

text: public

characteristic: Submitter Id

text: Whippet

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Whippet WGS


text: The Kennel Club Genetics Centre

text: public

text: Spaniel (Field)

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Spaniel (Field) WGS


text: The Kennel Club Genetics Centre

text: public

text: Retriever (Labrador)

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Retriever (Labrador) WGS


text: The Kennel Club Genetics Centre

text: public

text: Pyrenean Mountain Dog

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Pyrenean Mountain Dog WGS


text: The Kennel Club Genetics Centre

text: public

text: Australian Shepherd

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Australian Shepherd WGS


text: The Kennel Club Genetics Centre

text: public

text: Beagle

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Beagle WGS


text: The Kennel Club Genetics Centre

text: public

text: Basset Griffon Vendeen (Grand)

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Basset Griffon Vendeen (Grand) WGS


text: The Kennel Club Genetics Centre

text: public

text: Spaniel (English Springer)

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Spaniel (English Springer) WGS


text: The Kennel Club Genetics Centre

text: public

text: Retriever (Flat Coated)

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Retriever (Flat Coated)


text: The Kennel Club Genetics Centre

text: public

text: Greyhound

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Greyhound (WGS)


text: The Kennel Club Genetics Centre

text: public

text: Great Dane

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Great Dane WGS


text: The Kennel Club Genetics Centre

text: public

text: Keeshond

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Keeshond WGS


text: The Kennel Club Genetics Centre

text: public

text: Maltese

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Maltese WGS


text: The Kennel Club Genetics Centre

text: public

text: Miniature Long Haired Dachshund

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Miniature Long Haired Dachshund WGS


text: The Kennel Club Genetics Centre

text: public

text: Shar Pei

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Shar Pei WGS


text: The Kennel Club Genetics Centre

text: public

text: Shih Tzu

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Shih Tzu WGS


text: The Kennel Club Genetics Centre

text: public

text: Hungarian Vizsla

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Hungarian Vizsla


text: The Kennel Club Genetics Centre

text: public

text: Spaniel (Welsh Springer)

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Spaniel (Welsh Springer) WGS


text: The Kennel Club Genetics Centre

text: public

text: Crossbreed

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Crossbreed Dog WGS


text: The Kennel Club Genetics Centre

text: public

text: Spaniel (American Cocker)

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Spaniel (American Cocker) WGS


text: The Kennel Club Genetics Centre

text: public

text: Basset Hound

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Basset Hound WGS


text: The Kennel Club Genetics Centre

text: public

text: Border Terrier

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Border Terrier WGS


text: The Kennel Club Genetics Centre

text: public

text: Irish Setter

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Irish Setter WGS


text: The Kennel Club Genetics Centre

text: public

text: Miniature Wire Haired Dachshund

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Miniature Wire Haired Dachshund WGS


text: The Kennel Club Genetics Centre

text: public

text: Collie (Rough)

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Collie (Rough) WGS


text: The Kennel Club Genetics Centre

text: public

text: Rottweiler

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Rottweiler WGS


text: The Kennel Club Genetics Centre

text: public

text: Soft Coated Wheaten Terrier

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Soft Coated Wheaten Terrier WGS


text: The Kennel Club Genetics Centre

text: public

text: West Highland White Terrier

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: West Highland White Terrier WCS


text: The Kennel Club Genetics Centre

text: public

text: Whippet

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Whippet WGS


text: The Kennel Club Genetics Centre

text: public

text: Cavalier King Charles Spaniel

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Cavalier King Charles Spaniel WGS


text: The Kennel Club Genetics Centre

text: public

text: Glen of Imaal Terrier

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Glen of Imaal Terrier WGS


text: The Kennel Club Genetics Centre

text: public

text: Hungarian Wire Haired Vizsla

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Hungarian Wire Haired Vizsla WGS


text: The Kennel Club Genetics Centre

text: public

text: Retriever (Nova Scotia Duck Tolling)

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Retriever (Nova Scotia Duck Tolling) WGS


text: The Kennel Club Genetics Centre

text: public

text: Otterhound

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Otterhound WGS


text: The Kennel Club Genetics Centre

text: public

text: Airedale Terrier

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Airedale Terrier WGS


text: The Kennel Club Genetics Centre

text: public

text: Border Collie

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Border Collie WGS


text: The Kennel Club Genetics Centre

text: public

text: Crossbreed (Collie-X)

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Crossbreed (Collie-X) Dog WGS


text: The Kennel Club Genetics Centre

text: public

text: Corgi

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Corgi WGS


text: The Kennel Club Genetics Centre

text: public

text: Chinese Crested

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Chinese Crested WGS


text: The Kennel Club Genetics Centre

text: public

text: Griffon Bruxellois

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Griffon Bruxellois WGS


text: The Kennel Club Genetics Centre

text: public

text: Giant Schnauzer

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Giant Schnauzer WGS


text: The Kennel Club Genetics Centre

text: public

text: German Shepherd Dog

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: German Shepherd Dog WGS


text: The Kennel Club Genetics Centre

text: public

text: Irish Setter

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Irish Setter WGS


text: The Kennel Club Genetics Centre

text: public

text: Spaniel (Irish Water)

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Spaniel (Irish Water) WGS


text: The Kennel Club Genetics Centre

text: public

text: Newfoundland

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Newfoundland WGS


text: The Kennel Club Genetics Centre

text: public

text: Norwich Terrier

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Norwich Terrier WGS


text: The Kennel Club Genetics Centre

text: public

text: Collie (Smooth)

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Collie (Smooth) WGS


text: IOA

text: public

text: orange mud crab

text: Myanmar

characteristic: geographic location (country and/or sea)

text: Mota Ma Bay

characteristic: geographic location (region and locality)

text: Scylla olivacea

text: U

characteristic: population

text: Scylla olivacea

text: Muscle (claw)


characteristic: ENA-CHECKLIST

text: IOA

text: public

text: green mud crab

characteristic: common name

text: China

text: Taishan City

text: Scylla paramamosain

text: Gd

text: Scylla paramamosain

text: Muscle (claw)


characteristic: ENA-FIRST-PUBLIC

text: IOA

text: public

text: green mud crab

text: China

text: Beihai

text: Scylla paramamosain

characteristic: organism

text: Gx

text: Scylla paramamosain

text: Muscle (claw)


text: IOA

characteristic: INSDC first public

text: public

text: green mud crab

text: China

text: Hele Town

text: Scylla paramamosain

text: Hn

text: Scylla paramamosain

text: Muscle (claw)


text: IOA

text: public

text: green mud crab

text: China

text: Sanmen Bay

text: Scylla paramamosain

text: Sm

text: Scylla paramamosain

text: Muscle (claw)

characteristic: title


text: IOA

characteristic: INSDC last update

text: public

text: green mud crab

text: Viet Nam

text: Ha Long

text: Scylla paramamosain

text: V

text: Scylla paramamosain

text: Muscle (claw)


characteristic: ENA-LAST-UPDATE

text: IOA

text: public

text: green mud crab

text: China

text: Xiapu harbour

text: Scylla paramamosain

text: Xp

text: Scylla paramamosain

text: Muscle (claw)


text: IOA

text: public

characteristic: INSDC status

text: giant mud crab

text: India

text: Kanthi

text: Scylla serrata

text: I

text: Scylla serrata

text: Muscle (claw)


text: IOA

text: public

text: giant mud crab

text: India

text: Chilika Lake

text: Scylla serrata

text: J

text: Scylla serrata

text: Muscle (claw)


text: public

tag: Namespace:MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY

characteristic: collection date

text: human metagenome

text: shotgun metagenome

characteristic: description

text: human gut microbiome

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: stool

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human metagenome

characteristic: project name

text: human metagenome

text: HiSeq 3000

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: human metagenome

characteristic: common name

text: shotgun metagenome

text: human gut microbiome

text: gut

text: stool

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: human-gut

text: metagenome

text: human metagenome

characteristic: organism

text: human metagenome

text: HiSeq 3000


characteristic: ENA-LAST-UPDATE

text: Cantacuzino NIMMRD

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: Romania

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: feces

characteristic: isolation source

text: Escherichia coli O26:H11

text: Escherichia coli O26:H11

characteristic: serovar

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: Cantacuzino NIMMRD

characteristic: INSDC center name

text: public

text: Romania

text: diseased

text: Homo sapiens

text: feces

text: Escherichia coli

text: Escherichia coli


text: Royal Botanic Gardens, Kew

text: public

characteristic: SRA accession

tag: Namespace:Royal Botanic Gardens, Kew

characteristic: Submitter Id

text: Eugeissona tristis

text: Eugeissona tristis

text: Baker 501 (K)

characteristic: specimen voucher

text: Vouchered specimen


characteristic: ENA-LAST-UPDATE

text: Royal Botanic Gardens, Kew

characteristic: INSDC first public

text: public

text: Eugeissona utilis

characteristic: organism

text: Eugeissona utilis

text: Baker 712 (SAR)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Oncocalamus mannii

text: Oncocalamus mannii

text: Sunderland 1768 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Oncocalamus tuleyi

text: Oncocalamus tuleyi

text: Dransfield JD7007 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Eremospatha laurentii

text: Eremospatha laurentii

text: 1984-1058 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Eremospatha wendlandiana

text: Eremospatha wendlandiana

text: Dransfield JD7004 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Laccosperma opacum

text: Laccosperma opacum

text: Sunderland 1750 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Laccosperma secundiflorum

text: Laccosperma secundiflorum

text: Sunderland 1763 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Raphia farinifera

text: Raphia farinifera

text: Dransfield JD7516 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Raphia regalis

text: Raphia regalis

text: Couvreur 753 (WAG)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Raphia textilis

text: Raphia textilis

text: Couvreur 1075 (WAG)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Raphia sudanica

text: Raphia sudanica

text: Michon 56 (G)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Raphia monbuttorum

text: Raphia monbuttorum

text: Mogue 4 (WAG)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Raphia hookeri

text: Raphia hookeri

text: Couvreur 984 (WAG)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Lepidocaryum tenue

text: Lepidocaryum tenue

text: Dransfield JD7012 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Mauritia carana

text: Mauritia carana

text: Traill 1103 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Mauritia flexuosa

text: Mauritia flexuosa

text: Ely 17 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Mauritiella aculeata

text: Mauritiella aculeata

text: 1988-4331 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Mauritiella armata

text: Mauritiella armata

text: Couvreur 257 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Korthalsia robusta

text: Korthalsia robusta

text: Baker 552 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Korthalsia jala

text: Korthalsia jala

text: Baker 558 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Korthalsia rostrata

text: Korthalsia rostrata

text: Kuhnhaeuser 34 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Korthalsia rigida

text: Korthalsia rigida

text: Baker 498 (KEP)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Eleiodoxa conferta

text: Eleiodoxa conferta

text: Dransfield JD6514 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Salacca secunda

text: Salacca secunda

text: Henderson 3176 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Salacca zalacca

text: Salacca zalacca

text: 1984-3376 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Salacca affinis

text: Salacca affinis

text: Baker 708 (SAR)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Salacca lophospatha

text: Salacca lophospatha

text: Clemens 26380 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Metroxylon salomonense

text: Metroxylon salomonense

text: Zona 651 (FTG)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Metroxylon sagu

text: Metroxylon sagu

text: Baker 550 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Pigafetta elata

text: Pigafetta elata

text: Baker 508 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Pigafetta filaris

text: Pigafetta filaris

text: Dransfield JD7610 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Plectocomia elongata var. philippinensis

text: Dransfield JD6200 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Plectocomia himalayana

text: Plectocomia himalayana

text: Baker 815 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Myrialepis paradoxa

text: Myrialepis paradoxa

text: Baker 491 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Plectocomiopsis geminiflora

text: Plectocomiopsis geminiflora

text: Baker 492 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Plectocomiopsis mira

text: Plectocomiopsis mira

text: Kuhnhaeuser 44 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Plectocomiinae sp. BK-2020

text: Plectocomiinae sp. BK-2020

text: Kuhnhaeuser 35 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus erectus

text: Calamus erectus

text: Baker 814 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus acanthophyllus

text: Calamus acanthophyllus

text: Khamphone 141 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus arborescens

text: Calamus arborescens

text: Henderson 3182 (NY)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus castaneus

text: Calamus castaneus

text: Baker 507 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus thysanolepis

text: Calamus thysanolepis

text: Shui Ying Hu 12415 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus deerratus

text: Calamus deerratus

text: Sunderland 1754 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus radiatus

text: Calamus radiatus

text: de Zoysa 3 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus godefroyi

text: Calamus godefroyi

text: Evans 153 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus usitatus

text: Calamus usitatus

text: Baker 564 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus harmandii

text: Calamus harmandii

text: Khamphone 398 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus acanthochlamys

text: Calamus acanthochlamys

text: 1989-2701 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus rheedei

text: Calamus rheedei

text: Unknown 291 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus peregrinus

text: Calamus peregrinus

text: Henderson 3959 (NY)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus rhabdocladus

text: Calamus rhabdocladus

text: Henderson 3763 (NY)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus ciliaris

text: Calamus ciliaris

text: 1992-2048 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus rhomboideus

text: Calamus rhomboideus

text: Baker 565 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus symphysipus

text: Calamus symphysipus

text: Henderson 4234 (NY)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus aruensis

text: Calamus aruensis

text: Baker 568 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus ornatus

text: Calamus ornatus

text: Dransfield JD7628 (KEP)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus zollingeri subsp. zollingeri

text: Calamus zollingeri subsp. zollingeri

text: Henderson 4318 (NY)

text: zollingeri

characteristic: sub species

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus aruensis

text: Calamus aruensis

text: Dransfield JD7571 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus compsostachys

text: Calamus compsostachys

text: RITF s.n. (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus oxleyanus

text: Calamus oxleyanus

text: Rajasegar 20 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus moseleyanus

text: Calamus moseleyanus

text: Baker 545 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus conirostris

text: Calamus conirostris

text: Baker 532 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus pogonacanthus

text: Calamus pogonacanthus

text: Baker 522 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus koordersianus

text: Calamus koordersianus

text: Kramadibrata s.n. (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus pedicellatus

text: Calamus pedicellatus

text: Henderson 4361 (NY)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus calospathus

text: Calamus calospathus

text: 1990-2783 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus pseudoconcolor

text: Calamus pseudoconcolor

text: 1975-3398 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus melanochaetes

text: Calamus melanochaetes

text: Henderson 3992 (NY)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus crinitus subsp. sabut

text: Calamus crinitus subsp. sabut

text: Rajasegar 8 (K)

text: sabut

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus ursinus

text: Calamus ursinus

text: Baker 517 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus dumetosus

text: Calamus dumetosus

text: Baker 530 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus usitatus

text: Calamus usitatus

text: Henderson 4020 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus discolor

text: Calamus discolor

text: Henderson 3996 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Calamus inermis

text: Calamus inermis

text: Oulathong 213 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: nipa palm

characteristic: common name

text: Nypa fruticans

text: Nypa fruticans

text: Chase 12603 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Kerriodoxa elegans

text: Kerriodoxa elegans

text: Baker 1987-2685 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Ceroxylon quindiuense

text: Ceroxylon quindiuense

text: Baker 1976-1160 (K)

text: Vouchered specimen


text: Royal Botanic Gardens, Kew

text: public

text: Asterogyne martiana

text: Asterogyne martiana

text: Cano ACS361 (G)

text: Vouchered specimen


text: UNIVERSITY OF COPENHAGEN

text: public

tag: Namespace:UNIVERSITY OF COPENHAGEN

text: AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAA;GAACGACATGGCTACGATCCGACTT

characteristic: adapters

characteristic: collection date

text: Prior chicken data from Caecum content; animal CA01.03 from cage CA01 with treatment CC

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

text: Caecum content

characteristic: host body site

text: Cobb

characteristic: host breed

text: Chicken

characteristic: host common name

text: Control

characteristic: host diet treatment

text: Campylobacter:-;Salmonella:-;Clostridium:-

characteristic: host disease status

text: Gallus gallus

characteristic: host scientific name

text: male

characteristic: host sex

unit: °C

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

unit: g

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: chicken gut metagenome

text: HoloFood

characteristic: project

text: HoloFood Chicken - Prior Chicken

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: E-matrix 2ml

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

unit: mL

characteristic: sample volume or weight for DNA extraction

text: chicken gut metagenome

characteristic: sequencing method

unit: day

characteristic: trial length

characteristic: trial timepoint

type: EXTERNAL LINKS

type: BIOGENIC AMINES

type: SAMPLE

value: Experiment

value: metagenomics

value: Pool

value: UCPH

value: Raw sequence name

value: Project

value: HoloFood

value: Organism

value: Chicken

value: Body site

value: caecum content

value: Lab Process ID

value: ng used for library build

value: Index PCR cycles


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Prior chicken data from Caecum content; animal CA01.09 from cage CA01 with treatment CC

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

text: Caecum content

characteristic: host body site

text: Cobb

characteristic: host breed

text: Chicken

characteristic: host common name

text: Control

characteristic: host diet treatment

characteristic: host disease status

text: Gallus gallus

characteristic: host scientific name

text: male

characteristic: host sex

text: D-rex protocol

text: chicken gut metagenome

characteristic: organism

text: HoloFood

text: HoloFood Chicken - Prior Chicken

text: Shield

text: E-matrix 2ml

text: UCPH

text: chicken gut metagenome

characteristic: title

value: Sequencing company

value: BGI

value: Sample code


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Prior chicken data from Caecum content; animal CA01.15 from cage CA01 with treatment CC

text: Spain

text: El Morell; Tarragona

text: Caecum content

text: Cobb

text: Chicken

text: Control

text: Gallus gallus

text: male

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: chicken gut metagenome

text: HoloFood

characteristic: project

text: HoloFood Chicken - Prior Chicken

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: E-matrix 2ml

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: chicken gut metagenome

characteristic: sequencing method

characteristic: trial length

characteristic: trial timepoint

value: Experiment

value: too low


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Prior chicken data from Caecum content; animal CA02.15 from cage CA02 with treatment CO

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

text: Caecum content

characteristic: host body site

text: Ross

characteristic: host breed

text: Chicken

characteristic: host common name

text: Probiotic

characteristic: host diet treatment

characteristic: host disease status

text: Gallus gallus

characteristic: host scientific name

text: female

characteristic: host sex

text: D-rex protocol

text: chicken gut metagenome

characteristic: organism

text: HoloFood

text: HoloFood Chicken - Prior Chicken

text: Shield

text: E-matrix 2ml

text: UCPH

text: chicken gut metagenome

characteristic: title

value: metagenomics

value: Pool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Prior chicken data from Caecum content; animal CA04.01 from cage CA04 with treatment CC

text: Spain

text: El Morell; Tarragona

text: Caecum content

text: Cobb

text: Chicken

text: Control

text: Gallus gallus

text: female

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: chicken gut metagenome

text: HoloFood

characteristic: project

text: HoloFood Chicken - Prior Chicken

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: E-matrix 2ml

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: chicken gut metagenome

characteristic: sequencing method

characteristic: trial length

characteristic: trial timepoint

value: UCPH


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Prior chicken data from Caecum content; animal CA04.14 from cage CA04 with treatment CC

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

text: Caecum content

characteristic: host body site

text: Cobb

characteristic: host breed

text: Chicken

characteristic: host common name

text: Control

characteristic: host diet treatment

characteristic: host disease status

text: Gallus gallus

characteristic: host scientific name

text: female

characteristic: host sex

text: D-rex protocol

text: chicken gut metagenome

characteristic: organism

text: HoloFood

text: HoloFood Chicken - Prior Chicken

text: Shield

text: E-matrix 2ml

text: UCPH

text: chicken gut metagenome

characteristic: title

value: Project


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Prior chicken data from Caecum content; animal CA04.16 from cage CA04 with treatment CC

text: Spain

text: El Morell; Tarragona

text: Caecum content

text: Cobb

text: Chicken

text: Control

text: Gallus gallus

text: female

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: chicken gut metagenome

text: HoloFood

characteristic: project

text: HoloFood Chicken - Prior Chicken

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: E-matrix 2ml

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: chicken gut metagenome

characteristic: sequencing method

characteristic: trial length

characteristic: trial timepoint

value: HoloFood

type: TRIAL

value: Trial start

value: Trial code

value: CA

value: Trial end

value: Trial description

value: Trial 1

type: TREATMENT

value: Treatment name


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Prior chicken data from Caecum content; animal CA05.03 from cage CA05 with treatment CE

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

text: Caecum content

characteristic: host body site

text: Ross

characteristic: host breed

text: Chicken

characteristic: host common name

text: Prebiotic

characteristic: host diet treatment

characteristic: host disease status

text: Gallus gallus

characteristic: host scientific name

text: female

characteristic: host sex

text: D-rex protocol

text: chicken gut metagenome

characteristic: organism

text: HoloFood

text: HoloFood Chicken - Prior Chicken

text: Shield

text: E-matrix 2ml

text: UCPH

text: chicken gut metagenome

characteristic: title

value: Sequencing company

value: Raw sequence name

value: ng used for library build

value: Lab Process ID

value: Index PCR cycles

value: Organism

value: Chicken


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Prior chicken data from Caecum content; animal CA06.02 from cage CA06 with treatment CO

text: Spain

text: El Morell; Tarragona

text: Caecum content

text: Cobb

text: Chicken

text: Probiotic

text: Campylobacter:NS;Salmonella:NS;Clostridium:NS

text: Gallus gallus

text: male

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: chicken gut metagenome

text: HoloFood

characteristic: project

text: HoloFood Chicken - Prior Chicken

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: E-matrix 2ml

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: chicken gut metagenome

characteristic: sequencing method

characteristic: trial length

characteristic: trial timepoint

value: UCPH

value: Pool

value: BGI

value: Experiment

value: metagenomics

value: Sample code

value: Body site

value: caecum content


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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text: Prior chicken data from Caecum content; animal CA07.02 from cage CA07 with treatment CE

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text: Prior chicken data from Caecum content; animal CA09.01 from cage CA09 with treatment CE

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text: AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAA;GAACGACATGGCTACGATCCGACTT

text: Prior chicken data from Caecum content; animal CA11.08 from cage CA11 with treatment CC

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text: Prior chicken data from Caecum content; animal CA11.18 from cage CA11 with treatment CC

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text: Campylobacter:-;Salmonella:-;Clostridium:-

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value: ng used for library build


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text: Prior chicken data from Caecum content; animal CA13.06 from cage CA13 with treatment CE

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text: Prior chicken data from Caecum content; animal CA14.02 from cage CA14 with treatment CC

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text: Prior chicken data from Caecum content; animal CA15.01 from cage CA15 with treatment CE

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text: Prior chicken data from Caecum content; animal CA16.09 from cage CA16 with treatment CO

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text: Prior chicken data from Caecum content; animal CA17.03 from cage CA17 with treatment CO

characteristic: description

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

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characteristic: geographic location (region and locality)

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characteristic: host body site

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characteristic: host scientific name

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text: Prior chicken data from Caecum content; animal CA17.12 from cage CA17 with treatment CO

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characteristic: host storage container temperature

characteristic: host subject id

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text: Prior chicken data from Caecum content; animal CA18.08 from cage CA18 with treatment CC

characteristic: description

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

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characteristic: host body site

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text: Prior chicken data from Caecum content; animal CA19.01 from cage CA19 with treatment CO

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text: Caecum content

text: Ross

text: Chicken

text: Probiotic

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text: female

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

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text: D-rex protocol

characteristic: nucleic acid extraction

text: chicken gut metagenome

text: HoloFood

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characteristic: project name

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text: Shield

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text: E-matrix 2ml

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characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: chicken gut metagenome

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value: metagenomics