text: INSTITUT PASTEUR

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Bacterial culture

text: Mayotte

text: not collected

text: Wound

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1330


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSTITUT PASTEUR

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

tag: Namespace:INSTITUT PASTEUR

characteristic: Submitter Id

characteristic: collection date

text: Bacterial culture

characteristic: description

text: Mayotte

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: host health state

text: diphtheria Nat. Ref. Center, Institut Pasteur, Paris

characteristic: host scientific name

characteristic: isolate

text: Cutaneous

text: Corynebacterium diphtheriae

characteristic: organism

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1331

characteristic: title


text: INSTITUT PASTEUR

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Bacterial culture

text: Mayotte

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1332


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Cutaneous Wound

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1338


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1339


text: INSTITUT PASTEUR

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Bacterial culture

text: French Guiana

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1340


text: INSTITUT PASTEUR

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Bacterial culture

text: France

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1341


text: INSTITUT PASTEUR

text: public

characteristic: collection date

text: Bacterial culture

characteristic: description

text: France

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1342


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: host health state

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1343


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

characteristic: host scientific name

characteristic: isolate

text: Pharyngeal

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1347


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: French Guiana

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

characteristic: organism

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1348

characteristic: title


text: INSTITUT PASTEUR

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Bacterial culture

text: France

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1367


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Pharyngeal

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1410


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: French Guiana

text: not collected

text: Ear

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1417


text: INSTITUT PASTEUR

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Bacterial culture

text: France

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1425


text: INSTITUT PASTEUR

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Bacterial culture

text: France

text: not collected

text: Osteite

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1431


text: INSTITUT PASTEUR

text: public

characteristic: collection date

text: Bacterial culture

characteristic: description

text: Reunion

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1433


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: Mayotte

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: host health state

text: diphtheria Nat. Ref. Center, Institut Pasteur, Paris

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1461


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: Mayotte

text: not collected

characteristic: host scientific name

characteristic: isolate

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1462


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: Mayotte

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

characteristic: organism

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1467

characteristic: title


text: INSTITUT PASTEUR

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Bacterial culture

text: France

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1483


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: Reunion

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1510


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1512


text: INSTITUT PASTEUR

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Bacterial culture

text: French Guiana

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1575


text: INSTITUT PASTEUR

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Bacterial culture

text: French Guiana

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1578


text: INSTITUT PASTEUR

text: public

characteristic: collection date

text: Bacterial culture

characteristic: description

text: Reunion

text: not collected

text: Nasal

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1582


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: host health state

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1583


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

characteristic: host scientific name

characteristic: isolate

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1591


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: Reunion

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

characteristic: organism

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1594

characteristic: title


text: INSTITUT PASTEUR

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Bacterial culture

text: French Guiana

text: not collected

text: Not documented

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1595


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1601


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1607


text: INSTITUT PASTEUR

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Bacterial culture

text: French Guiana

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1608


text: INSTITUT PASTEUR

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Bacterial culture

text: France

text: not collected

text: diphtheria Nat. Ref. Center, Institut Pasteur, Paris

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1623


text: INSTITUT PASTEUR

text: public

characteristic: collection date

text: Bacterial culture

characteristic: description

text: France

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1626


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: Mayotte

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: host health state

text: Pharyngeous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1629


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: Mayotte

text: not collected

characteristic: host scientific name

characteristic: isolate

text: Not documented

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1631


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: Mayotte

text: not collected

text: Not documented

text: Corynebacterium diphtheriae

characteristic: organism

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1632

characteristic: title


text: INSTITUT PASTEUR

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Bacterial culture

text: Mayotte

text: not collected

text: Not documented

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1633


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1636


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: Reunion

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1637


text: INSTITUT PASTEUR

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Bacterial culture

text: Reunion

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1638


text: INSTITUT PASTEUR

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Bacterial culture

text: France

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1639


text: INSTITUT PASTEUR

text: public

characteristic: collection date

text: Bacterial culture

characteristic: description

text: French Guiana

text: not collected

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1648


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: host health state

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1661


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

characteristic: host scientific name

characteristic: isolate

text: Wound

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1662


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Wound

text: Corynebacterium diphtheriae

characteristic: organism

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1663

characteristic: title


text: INSTITUT PASTEUR

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Bacterial culture

text: France

text: not collected

text: Wound

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1664


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Wound

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1667


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: diphtheria Nat. Ref. Center, Institut Pasteur, Paris

text: Cutaneous

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1670


text: INSTITUT PASTEUR

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Bacterial culture

text: France

text: not collected

text: Wound

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1672


text: INSTITUT PASTEUR

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Bacterial culture

text: France

text: not collected

text: Respiratory

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1678


text: INSTITUT PASTEUR

text: public

characteristic: collection date

text: Bacterial culture

characteristic: description

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1679


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: host health state

text: Wound

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1683


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

characteristic: host scientific name

characteristic: isolate

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1686


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Not documented

text: Corynebacterium diphtheriae

characteristic: organism

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1688

characteristic: title


text: INSTITUT PASTEUR

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Bacterial culture

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1689


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1690


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: Mayotte

text: not collected

text: Respiratory

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1694


text: INSTITUT PASTEUR

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Bacterial culture

text: Mayotte

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1695


text: INSTITUT PASTEUR

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Bacterial culture

text: Mayotte

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1696


text: INSTITUT PASTEUR

text: public

characteristic: collection date

text: Bacterial culture

characteristic: description

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1698


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: host health state

text: Respiratory

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1700


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

characteristic: host scientific name

characteristic: isolate

text: Not documented

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1701


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

characteristic: organism

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1702

characteristic: title


text: INSTITUT PASTEUR

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Bacterial culture

text: France

text: not collected

text: diphtheria Nat. Ref. Center, Institut Pasteur, Paris

text: Not documented

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1703


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1704


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Not documented

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1705


text: INSTITUT PASTEUR

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Bacterial culture

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1710


text: INSTITUT PASTEUR

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Bacterial culture

text: France

text: not collected

text: Respiratory

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1712


text: INSTITUT PASTEUR

text: public

characteristic: collection date

text: Bacterial culture

characteristic: description

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1716


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: host health state

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1717


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

characteristic: host scientific name

characteristic: isolate

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1718


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

characteristic: organism

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1725

characteristic: title


text: INSTITUT PASTEUR

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Bacterial culture

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1727


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1728


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1731


text: INSTITUT PASTEUR

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Bacterial culture

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1733


text: INSTITUT PASTEUR

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Bacterial culture

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1734


text: INSTITUT PASTEUR

text: public

characteristic: collection date

text: Bacterial culture

characteristic: description

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1736


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: host health state

text: Respiratory

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1738


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: diphtheria Nat. Ref. Center, Institut Pasteur, Paris

characteristic: host scientific name

characteristic: isolate

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1743


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

characteristic: organism

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1746

characteristic: title


text: INSTITUT PASTEUR

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Bacterial culture

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1747


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1748


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1749


text: INSTITUT PASTEUR

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Bacterial culture

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1750


text: INSTITUT PASTEUR

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Bacterial culture

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1755


text: INSTITUT PASTEUR

text: public

characteristic: collection date

text: Bacterial culture

characteristic: description

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1764


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: host health state

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1765


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

characteristic: host scientific name

characteristic: isolate

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1769


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

characteristic: organism

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1770

characteristic: title


text: INSTITUT PASTEUR

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Bacterial culture

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1774


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Respiratory

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1775


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: French Guiana

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1782


text: INSTITUT PASTEUR

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Bacterial culture

text: France

text: not collected

text: Respiratory

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1783


text: INSTITUT PASTEUR

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Bacterial culture

text: France

text: not collected

text: Respiratory

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1784


text: INSTITUT PASTEUR

text: public

characteristic: collection date

text: Bacterial culture

characteristic: description

text: France

text: not collected

text: diphtheria Nat. Ref. Center, Institut Pasteur, Paris

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1786


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: host health state

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1788


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

characteristic: host scientific name

characteristic: isolate

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1789


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

characteristic: organism

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1791

characteristic: title


text: INSTITUT PASTEUR

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Bacterial culture

text: France

text: not collected

text: Not documented

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1795


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: French Guiana

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1796


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Ear

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1797


text: INSTITUT PASTEUR

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Bacterial culture

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1798


text: INSTITUT PASTEUR

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Bacterial culture

text: France

text: not collected

text: Respiratory

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1799


text: INSTITUT PASTEUR

text: public

characteristic: collection date

text: Bacterial culture

characteristic: description

text: France

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1805


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: host health state

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1808


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

characteristic: host scientific name

characteristic: isolate

text: Respiratory

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1809


text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: France

text: not collected

text: Respiratory

text: Corynebacterium diphtheriae

characteristic: organism

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1810

characteristic: title


text: INSTITUT PASTEUR

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Bacterial culture

text: France

text: not collected

text: Respiratory

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1822


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: INSTITUT PASTEUR

text: public

text: Bacterial culture

text: French Guiana

text: not collected

text: Cutaneous and soft tissue

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae

text: Corynebacterium diphtheriae strain FRC1824


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Shanghai Tenth People's Hospital

text: public

tag: Namespace:Shanghai Tenth People's Hospital

text: ArrayExpress

characteristic: broker name

text: Protocols: Strains were maintained at -80˚C. Strains were streaked on YPD plates. The plates were incubated at 37˚C overnight. Then several colonies were picked up and suspended in DDW. Cell density was adjusted to 10,000 cells/ml, then 100µl of cell suspension was plated on YPD plates. The plates were incubated at 37˚C overnight. Colonies were picked up and suspended in DDW, then cell pellets were obtained by centrifuging at highest speed for 1min. We used the phenol-chloroform method to extract Genomic DNA. Cell pellets were suspended in 200µl of lysis buffer, add 100µl of acid washed glass beads, and 0,2ml phenol:chloroform:isoamyl alcohol (25:24:1). Vortex for 30min at 4˚C. Add 200µl TE pH7.5. Centrifuge for 5min at maximum speed. Transfer aqueous layer to a new 1.5ml EP tube. Add 1ml 100% ethanol. Precipitate 1h at -20˚C. Pellet DNA by centrifuging for 10min at maximum speed. Discard the supernatant. Add 400µl TE pH 7.5. Add 3ul of RNase A (10mg/ml). Incubate at 37˚C for 30min. Add 10µl of 3M NaOAc and 1ml of 100% ethanol. Mix by inversion. Precipitate 30min at -20˚C. Pellet DNA by centrifuging for 10min at maximum speed. Discard supernatant. Air-dry the pellet overnight. Resuspend in 50µl water. 1µg Genomic DNA was randomly fragmented by Covaris, followed by fragments selection by Agencourt AMPure XP-Medium kit to an average size of 200~400 bp. Selected fragments were end repaired and 3\adenylate, then the adaptors were ligated to the end of these 3\adenylate fragments. The products were amplified by PCR and purified by the Agencourt AMPure XP-Medium kit. The purified double stranded PCR products were heat denatured to single strand, then circularised by the splint oligo sequence. The single strand circle DNA (ssCirDNA) were formatted as the final library and qualified by QC.

text: wild type genotype

characteristic: genotype

text: Candida albicans

text: Candida albicans

text: whole organism

characteristic: organism part

text: Candida albicans

characteristic: strain


text: Shanghai Tenth People's Hospital

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: description

text: VMA11 homozygous deletion

text: Candida albicans

text: Candida albicans

text: whole organism

text: Candida albicans


text: Shanghai Tenth People's Hospital

text: public

characteristic: adapter library

text: ArrayExpress

text: aneuploid type

text: Candida albicans

characteristic: organism

text: Candida albicans

text: whole organism

text: Candida albicans


characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

tag: Namespace:Hopital du Valais, Institut Central des Hopitaux, Sion, Switzerland

text: SIB

text: Valais Hospital, Central Institute; Sion, Switzerland

characteristic: collecting institution

characteristic: collection date

text: Alexis Dumoulin, Lorenzo Cerutti, Cedric Howald, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VS

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VS-ICH-2221243183/2022

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: active surveillance not initiated by an outbreak

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hopital du Valais, Institut Central des Hopitaux, Sion, Switzerland

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Switzerland

text: VS

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2221257301/2022


characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

text: SIB

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VS

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230129092/2023

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Switzerland

text: VS

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VS-ICH-2230131069/2023

characteristic: isolate

characteristic: sample capture status

characteristic: title


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: VS

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2221251366/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VS

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230119003/2023

characteristic: organism


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Switzerland

text: VS

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VS-ICH-2221251489/2022

characteristic: isolate

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: VS

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230110740/2023


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VS

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230108107/2023

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Switzerland

text: VS

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VS-ICH-2230137020/2023

characteristic: isolate

characteristic: sample capture status

characteristic: title


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: VS

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230116477/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Valais Hospital, Central Institute; Sion, Switzerland

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VS

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230120155/2023

characteristic: organism


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Alexis Dumoulin, Lorenzo Cerutti, Cedric Howald, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

text: Switzerland

text: VS

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VS-ICH-2230128440/2023

characteristic: isolate

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: VS

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230137567/2023

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak


characteristic: GISAID Accession ID

text: Hopital du Valais, Institut Central des Hopitaux, Sion, Switzerland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VS

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230116949/2023

characteristic: organism

text: active surveillance not initiated by an outbreak


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Switzerland

text: VS

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VS-ICH-2221246752/2022

characteristic: isolate

characteristic: sample capture status

characteristic: title


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: VS

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2221254403/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VS

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2221254862/2022

characteristic: organism


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Switzerland

text: VS

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VS-ICH-2230122642/2023

characteristic: isolate

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: VS

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230141453/2023


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VS

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230107406/2023

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Switzerland

text: VS

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VS-ICH-2221249351/2022

characteristic: isolate

characteristic: sample capture status

characteristic: title


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Valais Hospital, Central Institute; Sion, Switzerland

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: VS

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230101040/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Alexis Dumoulin, Lorenzo Cerutti, Cedric Howald, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VS

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2221255653/2022

characteristic: organism


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Switzerland

text: VS

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VS-ICH-2230116191/2023

characteristic: isolate

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: VS

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230136300/2023

text: Severe acute respiratory syndrome coronavirus 2


characteristic: GISAID Accession ID

text: Hopital du Valais, Institut Central des Hopitaux, Sion, Switzerland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VS

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230134991/2023

characteristic: organism

text: active surveillance in response to outbreak


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Switzerland

text: VS

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VS-ICH-2230110489/2023

characteristic: isolate

characteristic: sample capture status

text: active surveillance not initiated by an outbreak

characteristic: title


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: VS

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2221250359/2022


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VS

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230125100/2023

characteristic: organism


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Switzerland

text: VS

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VS-ICH-2221250370/2022

characteristic: isolate

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-ICH-2230126810/2023


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VS

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2221248405/2022

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

tag: Namespace:RIVM - National Institute for Public Health and the Environment

text: Netherlands

characteristic: country

text: Broilers

characteristic: host

text: Yes

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis

characteristic: serovar

characteristic: title


text: RIVM - National Institute for Public Health and the Environment

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Netherlands

text: Broilers

text: Yes

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis


characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Netherlands

text: Layers

text: Yes

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis


text: public

text: Netherlands

text: Human

text: Yes

text: Salmonella enterica

text: Salmonella enterica

text: Enteritidis


CHIEM TONG NHAT 1::IRGC 47496-1

text: Earlham Institute

text: public

text: CHIEM TONG NHAT 1::IRGC 47496-1

tag: Namespace:Earlham Institute

text: landrace

characteristic: biological status

characteristic: collection date

text: IRGC 127275 / IRGC 47496-1 / IRIS 313-11384 / https://doi.org/10.18730/3233~

characteristic: description

characteristic: estimated size

text: CHIEM TONG NHAT 1

characteristic: genotype

text: Viet Nam

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: glasshouse

characteristic: growth facility

text: single seed origin

characteristic: isolation and growth condition

characteristic: number of replicons

text: Oryza sativa Indica Group x Oryza sativa Japonica Group

text: rice

characteristic: organism common name

text: adult

characteristic: plant developmental stage

text: top soil

characteristic: plant growth medium

text: leaf

characteristic: plant structure

characteristic: ploidy

text: healthy

characteristic: sample health state

text: seed

characteristic: source material description

text: single seed origin

characteristic: source material identifiers

characteristic: subspecific genetic lineage name

characteristic: subspecific genetic lineage rank

text: CHIEM TONG NHAT 1::IRGC 47496-1


text: Healthy

characteristic: ArrayExpress-PHENOTYPE

text: female

characteristic: ArrayExpress-SEX

text: Homo sapiens

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Female

characteristic: GENDER

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Healthy

characteristic: PHENOTYPE

characteristic: SRA accession

characteristic: Submitter Id

text: human

characteristic: common name

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: title


text: Healthy

characteristic: ArrayExpress-PHENOTYPE

text: male

characteristic: ArrayExpress-SEX

text: Homo sapiens

text: Male

text: SC

text: public

text: Healthy

text: human

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-CHECKLIST

text: THE UNIVERSITY OF EDINBURGH

text: public

tag: Namespace:THE UNIVERSITY OF EDINBURGH

text: Lyn Cook

text: mRNA from body tissue of mother

characteristic: description

text: adult

text: Australia

characteristic: geographic location (country and/or sea)

text: Lockyer National Park, Qld

characteristic: geographic location (region and locality)

text: Cystococcus campanidorsalis

text: Cystococcus campanidorsalis

text: Female

characteristic: sex

text: somatic


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: THE UNIVERSITY OF EDINBURGH

characteristic: INSDC center name

text: public

text: Lyn Cook

text: mRNA from whole body of son 1

text: juvenille

text: Australia

text: Lockyer National Park, Qld

text: Cystococcus campanidorsalis

text: Cystococcus campanidorsalis

text: Male

text: whole body


text: THE UNIVERSITY OF EDINBURGH

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Lyn Cook

text: mRNA from whole body of son 2

text: juvenille

text: Australia

text: Lockyer National Park, Qld

text: Cystococcus campanidorsalis

text: Cystococcus campanidorsalis

text: Male

text: whole body


text: THE UNIVERSITY OF EDINBURGH

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Lyn Cook

text: mRNA from body tissue of mother

text: adult

text: Australia

text: Munduberra, Qld

text: Cystococcus echiniformis

text: Cystococcus echiniformis

text: Female

text: somatic


text: THE UNIVERSITY OF EDINBURGH

text: public

text: Lyn Cook

text: mRNA from whole body of son 1

text: juvenille

text: Australia

text: Munduberra, Qld

text: Cystococcus echiniformis

characteristic: organism

text: Cystococcus echiniformis

text: Male

text: whole body

characteristic: title


text: THE UNIVERSITY OF EDINBURGH

text: public

text: Lyn Cook

text: mRNA from whole body of son 2

text: juvenille

text: Australia

text: Munduberra, Qld

text: Cystococcus echiniformis

text: Cystococcus echiniformis

text: Male

text: whole body


text: THE UNIVERSITY OF EDINBURGH

text: public

text: Lyn Cook

text: mRNA from body tissue of mother

text: adult

text: Australia

text: Gayndah, Qld

text: Cystococcus echiniformis

text: Cystococcus echiniformis

text: Female

text: somatic


text: THE UNIVERSITY OF EDINBURGH

text: public

text: Lyn Cook

text: mRNA from whole body of son 1

text: juvenille

text: Australia

text: Gayndah, Qld

text: Cystococcus echiniformis

text: Cystococcus echiniformis

text: Male

text: whole body


text: THE UNIVERSITY OF EDINBURGH

text: public

text: Lyn Cook

text: mRNA from whole body of son 2

text: juvenille

text: Australia

text: Gayndah, Qld

text: Cystococcus echiniformis

text: Cystococcus echiniformis

text: Male

text: whole body


text: NIPH

text: public

text: ELIXIR-Norway

characteristic: broker name

text: S. pyogenes

characteristic: common name

text: GAS routine sample

text: Norway

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: blood

text: Streptococcus pyogenes

text: Streptococcus pyogenes


characteristic: ENA-CHECKLIST

text: NIPH

text: public

text: ELIXIR-Norway

text: S. pyogenes

text: GAS routine sample

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

text: not provided

text: Homo sapiens

text: not provided

text: Streptococcus pyogenes

text: Streptococcus pyogenes


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIPH

text: public

text: ELIXIR-Norway

text: S. pyogenes

text: GAS routine sample

text: Norway

text: not provided

text: Homo sapiens

text: biopsy, fascia

text: Streptococcus pyogenes

text: Streptococcus pyogenes


text: NIPH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ELIXIR-Norway

text: S. pyogenes

text: GAS routine sample

text: Norway

text: not provided

text: Homo sapiens

text: Pleural fluid

text: Streptococcus pyogenes

text: Streptococcus pyogenes


text: NIPH

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

text: S. pyogenes

text: GAS routine sample

text: Norway

text: not provided

text: Homo sapiens

text: Abscess

text: Streptococcus pyogenes

text: Streptococcus pyogenes


E-MTAB-12687:Sample 1

text: VANDERBILT UNIVERSITY

text: public

text: E-MTAB-12687:Sample 1

tag: Namespace:VANDERBILT UNIVERSITY

unit: week

characteristic: age

text: ArrayExpress

characteristic: broker name

text: endothelial cell

text: house mouse

text: Protocols: Mouse brain cortices were dissociated to single cell suspension and labelled with anti-CD31 antibody. Single cell suspension of CD31+ cells was collected as sample and submitted for sequencing. Nucleic acid was barcoded and extracted from cells using standard protocols for Chromium Next GEM Single cell 5' kit. Standard Chromium Single cell 5' Gene Expression Dual Index libraries were used.

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

characteristic: immunophenotype

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

characteristic: organism part

text: Mus musculus

text: female

characteristic: sex

characteristic: strain

text: Sample 1

characteristic: title


E-MTAB-12687:Sample 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: VANDERBILT UNIVERSITY

text: public

text: E-MTAB-12687:Sample 2

text: ArrayExpress

text: endothelial cell

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: female

text: Sample 2


text: INRA-META

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Denmark

characteristic: geographic location (country and/or sea)

text: stool

characteristic: host body product

text: human-gut

characteristic: host body site

text: human gut metagenome

text: human gut metagenome

text: human gut metagenome


text: FSU Jena

text: public

tag: Namespace:FSU Jena

text: A pool of Culicides schultzei

text: Culicoides schultzei

characteristic: organism

text: Culicoides schultzei

text: This sample has been submitted by koc bt on 2023-02-18 Culicoides spp.


text: public

tag: Namespace:West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: Scotland

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

characteristic: title

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Scotland

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

text: not provided

text: not provided


text: Lund University

text: public

tag: Namespace:Lund University

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: wastewater treatment plant (ENVO:00002043)

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Nitrosomonas MAG from partial nititation anammox MBBR

characteristic: description

text: waste water (ENVO:00002001)

characteristic: environmental medium

text: Sweden

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Klagshman WWTP

characteristic: geographic location (region and locality)

text: Biofilm from a full-scale sidestream partial nitritation anammox MBBR

text: biofilm (ENVO_00002034)

characteristic: local environmental context

text: biofilm metagenome

characteristic: metagenomic source

text: uncultured Nitrosomonas sp.

text: Partial nitritation anammox biofilm colonization

characteristic: project name

characteristic: sample derived from

text: uncultured Nitrosomonas sp.

text: multi-marker approach

characteristic: taxonomic identity marker

text: uncultured Nitrosomonas sp. KLAP12


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Lund University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

text: CheckM

text: waste water (ENVO:00002001)

text: Sweden

characteristic: geographic location (country and/or sea)

text: Klagshman WWTP

text: biofilm (ENVO_00002034)

text: biofilm metagenome

text: uncultured Nitrosomonas sp.

characteristic: organism

text: uncultured Nitrosomonas sp.

text: multi-marker approach

text: uncultured Nitrosomonas sp. KLAP95

characteristic: title


text: Lund University

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning software

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: waste water (ENVO:00002001)

characteristic: environmental medium

text: Sweden

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Klagshman WWTP

characteristic: geographic location (region and locality)

text: biofilm (ENVO_00002034)

characteristic: local environmental context

text: biofilm metagenome

characteristic: metagenomic source

text: uncultured Nitrosomonas sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Nitrosomonas sp.

text: multi-marker approach

characteristic: taxonomic identity marker

text: uncultured Nitrosomonas sp. KLAP104


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Lund University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

text: CheckM

text: waste water (ENVO:00002001)

text: Sweden

characteristic: geographic location (country and/or sea)

text: Klagshman WWTP

text: biofilm (ENVO_00002034)

text: biofilm metagenome

text: uncultured Nitrosomonas sp.

characteristic: organism

text: uncultured Nitrosomonas sp.

text: multi-marker approach

text: uncultured Nitrosomonas sp. KLAP127

characteristic: title


text: Lund University

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning software

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: waste water (ENVO:00002001)

characteristic: environmental medium

text: Sweden

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Klagshman WWTP

characteristic: geographic location (region and locality)

text: biofilm (ENVO_00002034)

characteristic: local environmental context

text: biofilm metagenome

characteristic: metagenomic source

text: uncultured Nitrosomonas sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Nitrosomonas sp.

text: multi-marker approach

characteristic: taxonomic identity marker

text: uncultured Nitrosomonas sp. KLAP135


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Lund University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

text: CheckM

text: waste water (ENVO:00002001)

text: Sweden

characteristic: geographic location (country and/or sea)

text: Klagshman WWTP

text: biofilm (ENVO_00002034)

text: biofilm metagenome

text: uncultured Nitrosomonas sp.

characteristic: organism

text: uncultured Nitrosomonas sp.

text: multi-marker approach

text: uncultured Nitrosomonas sp. KLAP183

characteristic: title


text: Lund University

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning software

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Nitrospira MAG from partial nititation anammox MBBR

characteristic: description

text: waste water (ENVO:00002001)

characteristic: environmental medium

text: Sweden

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Klagshman WWTP

characteristic: geographic location (region and locality)

text: biofilm (ENVO_00002034)

characteristic: local environmental context

text: biofilm metagenome

characteristic: metagenomic source

text: uncultured Nitrospira sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Nitrospira sp.

text: multi-marker approach

characteristic: taxonomic identity marker

text: uncultured Nitrospira sp. KLAP57


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Lund University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

text: CheckM

text: waste water (ENVO:00002001)

text: Sweden

characteristic: geographic location (country and/or sea)

text: Klagshman WWTP

text: biofilm (ENVO_00002034)

text: biofilm metagenome

text: uncultured Nitrospira sp.

characteristic: organism

text: uncultured Nitrospira sp.

text: multi-marker approach

text: uncultured Nitrospira sp. KLAP96

characteristic: title


text: Lund University

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning software

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Nitrotoga MAG from partial nititation anammox MBBR

characteristic: description

text: waste water (ENVO:00002001)

characteristic: environmental medium

text: Sweden

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Klagshman WWTP

characteristic: geographic location (region and locality)

text: biofilm (ENVO_00002034)

characteristic: local environmental context

text: biofilm metagenome

characteristic: metagenomic source

text: uncultured Candidatus Nitrotoga sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Candidatus Nitrotoga sp.

text: multi-marker approach

characteristic: taxonomic identity marker

text: uncultured Candidatus Nitrotoga sp KLAP52


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Lund University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

text: CheckM

text: Brocadia MAG from partial nititation anammox MBBR

text: waste water (ENVO:00002001)

text: Sweden

characteristic: geographic location (country and/or sea)

text: Klagshman WWTP

text: biofilm (ENVO_00002034)

text: biofilm metagenome

text: uncultured Candidatus Brocadia sp.

characteristic: organism

text: uncultured Candidatus Brocadia sp.

text: multi-marker approach

text: uncultured Candidatus Brocadia sp. KLAP158

characteristic: title


text: Lund University

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning software

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: waste water (ENVO:00002001)

characteristic: environmental medium

text: Sweden

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Klagshman WWTP

characteristic: geographic location (region and locality)

text: biofilm (ENVO_00002034)

characteristic: local environmental context

text: biofilm metagenome

characteristic: metagenomic source

text: uncultured Candidatus Brocadia sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Candidatus Brocadia sp.

text: multi-marker approach

characteristic: taxonomic identity marker

text: uncultured Candidatus Brocadia sp. KLAP180


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Lund University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

text: CheckM

text: waste water (ENVO:00002001)

text: Sweden

characteristic: geographic location (country and/or sea)

text: Klagshman WWTP

text: biofilm (ENVO_00002034)

text: biofilm metagenome

text: uncultured Candidatus Brocadia sp.

characteristic: organism

text: uncultured Candidatus Brocadia sp.

text: multi-marker approach

text: uncultured Candidatus Brocadia sp. KLAP193

characteristic: title


text: ARO

text: public

text: cattle

characteristic: common name

text: WGS of artificial-insemination bull

characteristic: description

text: Bos taurus

text: Bos taurus

text: DNA sequencing of Israeli Holstein bulls_Sample1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ARO

text: public

text: cattle

text: WGS of artificial-insemination bull

text: Bos taurus

text: Bos taurus

text: DNA sequencing of Israeli Holstein bulls_Sample2


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ARO

text: public

text: cattle

text: WGS of artificial-insemination bull

text: Bos taurus

text: Bos taurus

text: DNA sequencing of Israeli Holstein bulls_Sample3


text: ARO

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: cattle

text: WGS of artificial-insemination bull

text: Bos taurus

text: Bos taurus

text: DNA sequencing of Israeli Holstein bulls_Sample4


text: ARO

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: cattle

text: WGS of artificial-insemination bull

text: Bos taurus

text: Bos taurus

text: DNA sequencing of Israeli Holstein bulls_Sample5


text: ARO

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: cattle

text: WGS of artificial-insemination bull

text: Bos taurus

text: Bos taurus

text: DNA sequencing of Israeli Holstein bulls_Sample6


text: ARO

text: public

text: cattle

text: WGS of artificial-insemination bull

text: Bos taurus

text: Bos taurus

text: DNA sequencing of Israeli Holstein bulls_Sample7


text: ARO

text: public

text: cattle

text: WGS of artificial-insemination bull

text: Bos taurus

text: Bos taurus

text: DNA sequencing of Israeli Holstein bulls_Sample8


text: ARO

text: public

text: cattle

text: WGS of artificial-insemination bull

text: Bos taurus

text: Bos taurus

text: DNA sequencing of Israeli Holstein bulls_Sample9


text: ARO

text: public

text: cattle

text: WGS of artificial-insemination bull

text: Bos taurus

text: Bos taurus

text: DNA sequencing of Israeli Holstein bulls_Sample10


text: ARO

text: public

text: cattle

text: WGS of artificial-insemination bull

text: Bos taurus

text: Bos taurus

text: DNA sequencing of Israeli Holstein bulls_Sample11


text: ARO

text: public

text: cattle

text: WGS of artificial-insemination bull

text: Bos taurus

text: Bos taurus

text: DNA sequencing of Israeli Holstein bulls_Sample12


text: ARO

text: public

text: cattle

text: WGS of artificial-insemination bull

text: Bos taurus

text: Bos taurus

text: DNA sequencing of Israeli Holstein bulls_Sample13


text: ARO

text: public

text: cattle

text: WGS of artificial-insemination bull

text: Bos taurus

text: Bos taurus

text: DNA sequencing of Israeli Holstein bulls_Sample14


text: ARO

text: public

text: cattle

text: WGS of artificial-insemination bull

text: Bos taurus

text: Bos taurus

text: DNA sequencing of Israeli Holstein bulls_Sample15


text: ARO

text: public

text: cattle

text: WGS of artificial-insemination bull

text: Bos taurus

text: Bos taurus

text: DNA sequencing of Israeli Holstein bulls_Sample16


text: ARO

text: public

text: cattle

text: WGS of artificial-insemination bull

text: Bos taurus

text: Bos taurus

text: DNA sequencing of Israeli Holstein bulls_Sample17


characteristic: GISAID Accession ID

text: public

tag: Namespace:Institute for Infectious Diseases, Bern, Switzerland

text: SIB

characteristic: broker name

text: Institute for Infectious Diseases, University of Bern, Switzerland

characteristic: collecting institution

characteristic: collection date

text: Stefan Neuenschwander, Christian Baumann, Miguel A Terrazos Miani, Sonja Gempeler, Loïc Borcard, Lea Stauber, Cora Sägesser, Pascal Bittel, Peter Keller, Franziska Suter-Riniker, Stephen L Leib, Alban Ramette

characteristic: collector name

text: Switzerland

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-230213_os_04/2023

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: active surveillance not initiated by an outbreak


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute for Infectious Diseases, Bern, Switzerland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-230213_os_02/2023

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-230213_os_16/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-230213_os_17/2023

characteristic: isolate

characteristic: sample capture status


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-230213_os_08/2023

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-230213_os_12/2023


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-230213_os_06/2023

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-230213_os_05/2023

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-230213_os_13/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-230213_os_01/2023

characteristic: isolate

characteristic: sample capture status


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-230213_os_10/2023

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

characteristic: broker name

text: Institute for Infectious Diseases, University of Bern, Switzerland

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-230213_os_14/2023


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Stefan Neuenschwander, Christian Baumann, Miguel A Terrazos Miani, Sonja Gempeler, Loïc Borcard, Lea Stauber, Cora Sägesser, Pascal Bittel, Peter Keller, Franziska Suter-Riniker, Stephen L Leib, Alban Ramette

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-230213_os_15/2023

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-230213_os_18/2023

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: active surveillance in response to outbreak

characteristic: title


characteristic: GISAID Accession ID

text: Institute for Infectious Diseases, Bern, Switzerland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-230213_os_09/2023

text: active surveillance not initiated by an outbreak


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-230213_os_11/2023

characteristic: isolate

characteristic: sample capture status


text: NATIONAL VETERINARY INSTITUTE (SVA)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:NATIONAL VETERINARY INSTITUTE (SVA)

characteristic: Submitter Id

text: Sample number 1 from the EURL-Campylobacter proficiency test number 33, 2022.

characteristic: description

text: Sweden

characteristic: geographic location (country and/or sea)

text: not provided

text: Gallus gallus

text: Campylobacter jejuni

text: Chicken caeca

text: Campylobacter jejuni

characteristic: organism

text: Campylobacter jejuni

characteristic: strain

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NATIONAL VETERINARY INSTITUTE (SVA)

text: public

characteristic: collection date

text: Sample number 2 from the EURL-Campylobacter proficiency test number 33, 2022.

text: Sweden

text: not provided

characteristic: host health state

text: Gallus gallus

text: Campylobacter jejuni

text: Chicken caeca

text: Campylobacter jejuni

text: Campylobacter jejuni


text: NATIONAL VETERINARY INSTITUTE (SVA)

characteristic: INSDC center name

text: public

text: Sample number 3 from the EURL-Campylobacter proficiency test number 33, 2022.

text: Sweden

text: not provided

text: Gallus gallus

characteristic: host scientific name

text: Campylobacter jejuni

characteristic: isolate

text: Chicken caeca

text: Campylobacter jejuni

text: Campylobacter jejuni


text: NATIONAL VETERINARY INSTITUTE (SVA)

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Sample number 4 from the EURL-Campylobacter proficiency test number 33, 2022.

text: Sweden

text: not provided

text: Gallus gallus

text: Campylobacter jejuni

text: Chicken caeca

text: Campylobacter jejuni

text: Campylobacter jejuni


text: NATIONAL VETERINARY INSTITUTE (SVA)

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Sample number 5 from the EURL-Campylobacter proficiency test number 33, 2022.

characteristic: description

text: Sweden

text: not provided

text: Bos taurus

text: Campylobacter jejuni

text: Milk filter

text: Campylobacter jejuni

text: Campylobacter jejuni


text: NATIONAL VETERINARY INSTITUTE (SVA)

text: public

text: Sample number 7 from the EURL-Campylobacter proficiency test number 33, 2022.

text: Sweden

characteristic: geographic location (country and/or sea)

text: not provided

text: Gallus gallus

text: Campylobacter jejuni

text: Chicken caeca

text: Campylobacter jejuni

characteristic: organism

text: Campylobacter jejuni

characteristic: strain


text: Healthy

characteristic: ArrayExpress-PHENOTYPE

text: female

characteristic: ArrayExpress-SEX

text: Homo sapiens

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Female

characteristic: GENDER

text: SC

text: public

text: Healthy

characteristic: PHENOTYPE

text: human

characteristic: common name

text: Homo sapiens

text: Homo sapiens

characteristic: title


text: Healthy

text: male

text: Homo sapiens

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Male

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Healthy

text: human

text: Homo sapiens

text: Homo sapiens