characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SB11.16 from tank SB11 with treatment Mars

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Dønna; Nordland county

text: Distal gut tissue

text: Atlantic salmon

text: Sanford Blue Mussel Meal

text: Mars SB Blue mussel 0%

text: Wounded:-

text: Salmo salar

text: LetSea Tank: Mars

characteristic: host subject id

characteristic: host taxid

characteristic: host total mass

characteristic: library name

characteristic: library selection

text: D-rex protocol

characteristic: nucleic acid extraction

text: Salmo salar

text: HoloFood

characteristic: project

text: HoloFood Salmon - Host Transcriptome

characteristic: project name

characteristic: reference host genome for decontamination

text: RNAlater

characteristic: sample storage buffer

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: sequencing method

characteristic: trial timepoint


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF COPENHAGEN

characteristic: Submitter Id

text: AGATCGGAAGAGCACACGTCTGAACTCCAGTCA;AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SB11.17 from tank SB11 with treatment Mars

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut tissue

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

text: Sanford Blue Mussel Meal

characteristic: host diet

text: Mars SB Blue mussel 0%

characteristic: host diet treatment

unit: % mass

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

unit: g

characteristic: host gutted mass

unit: cm

characteristic: host length

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Mars

characteristic: host storage container

characteristic: host storage container pH

unit: °C

characteristic: host storage container temperature

text: Illumina Ribo-Zero Plus rRNA Depletion Kit + NEB Next Ultra RNA Library Prep Kit

text: rRNA depletion + strand specific library

text: D-rex protocol

text: Salmo salar

characteristic: organism

text: HoloFood

text: HoloFood Salmon - Host Transcriptome

text: RNAlater

text: UCPH

unit: mL

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: title

unit: day

type: EXTERNAL LINKS

type: SAMPLE

value: Organism

value: Salmon

value: Project

value: HoloFood

value: Sample code

value: Experiment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SB11.18 from tank SB11 with treatment Mars

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Dønna; Nordland county

text: Distal gut tissue

text: Atlantic salmon

text: Sanford Blue Mussel Meal

text: Mars SB Blue mussel 0%

text: Wounded:-

text: Salmo salar

text: LetSea Tank: Mars

characteristic: host subject id

characteristic: host taxid

characteristic: host total mass

characteristic: library name

characteristic: library selection

text: D-rex protocol

characteristic: nucleic acid extraction

text: Salmo salar

text: HoloFood

characteristic: project

text: HoloFood Salmon - Host Transcriptome

characteristic: project name

characteristic: reference host genome for decontamination

text: RNAlater

characteristic: sample storage buffer

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: sequencing method

characteristic: trial timepoint

value: transcriptomics

value: Body site

value: distal gut tissue


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SB11.19 from tank SB11 with treatment Mars

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut tissue

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

text: Sanford Blue Mussel Meal

characteristic: host diet

text: Mars SB Blue mussel 0%

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

characteristic: host length

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Mars

characteristic: host storage container

characteristic: host storage container pH

characteristic: host storage container temperature

text: D-rex protocol

text: Salmo salar

characteristic: organism

text: HoloFood

text: HoloFood Salmon - Host Transcriptome

text: RNAlater

text: UCPH

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SB11.20 from tank SB11 with treatment Mars

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Dønna; Nordland county

text: Distal gut tissue

text: Atlantic salmon

text: Sanford Blue Mussel Meal

text: Mars SB Blue mussel 0%

text: Wounded:-

text: Salmo salar

text: LetSea Tank: Mars

characteristic: host subject id

characteristic: host taxid

characteristic: host total mass

characteristic: library name

characteristic: library selection

text: D-rex protocol

characteristic: nucleic acid extraction

text: Salmo salar

text: HoloFood

characteristic: project

text: HoloFood Salmon - Host Transcriptome

characteristic: project name

characteristic: reference host genome for decontamination

text: RNAlater

characteristic: sample storage buffer

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: sequencing method

characteristic: trial timepoint


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SB11.21 from tank SB11 with treatment Mars

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut tissue

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

text: Sanford Blue Mussel Meal

characteristic: host diet

text: Mars SB Blue mussel 0%

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

characteristic: host length

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Mars

characteristic: host storage container

characteristic: host storage container pH

characteristic: host storage container temperature

text: D-rex protocol

text: Salmo salar

characteristic: organism

text: HoloFood

text: HoloFood Salmon - Host Transcriptome

text: RNAlater

text: UCPH

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SB11.22 from tank SB11 with treatment Mars

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Dønna; Nordland county

text: Distal gut tissue

text: Atlantic salmon

text: Sanford Blue Mussel Meal

text: Mars SB Blue mussel 0%

text: Wounded:-

text: Salmo salar

text: LetSea Tank: Mars

characteristic: host subject id

characteristic: host taxid

characteristic: host total mass

characteristic: library name

characteristic: library selection

text: D-rex protocol

characteristic: nucleic acid extraction

text: Salmo salar

text: HoloFood

characteristic: project

text: HoloFood Salmon - Host Transcriptome

characteristic: project name

characteristic: reference host genome for decontamination

text: RNAlater

characteristic: sample storage buffer

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: sequencing method

characteristic: trial timepoint


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SB11.23 from tank SB11 with treatment Mars

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut tissue

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

text: Sanford Blue Mussel Meal

characteristic: host diet

text: Mars SB Blue mussel 0%

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

characteristic: host length

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Mars

characteristic: host storage container

characteristic: host storage container pH

characteristic: host storage container temperature

text: D-rex protocol

text: Salmo salar

characteristic: organism

text: HoloFood

text: HoloFood Salmon - Host Transcriptome

text: RNAlater

text: UCPH

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SB11.24 from tank SB11 with treatment Mars

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Dønna; Nordland county

text: Distal gut tissue

text: Atlantic salmon

text: Sanford Blue Mussel Meal

text: Mars SB Blue mussel 0%

text: Wounded:-

text: Salmo salar

text: LetSea Tank: Mars

characteristic: host subject id

characteristic: host taxid

characteristic: host total mass

characteristic: library name

characteristic: library selection

text: D-rex protocol

characteristic: nucleic acid extraction

text: Salmo salar

text: HoloFood

characteristic: project

text: HoloFood Salmon - Host Transcriptome

characteristic: project name

characteristic: reference host genome for decontamination

text: RNAlater

characteristic: sample storage buffer

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: sequencing method

characteristic: trial timepoint


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SB11.25 from tank SB11 with treatment Mars

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut tissue

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

text: Sanford Blue Mussel Meal

characteristic: host diet

text: Mars SB Blue mussel 0%

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

characteristic: host length

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Mars

characteristic: host storage container

characteristic: host storage container pH

characteristic: host storage container temperature

text: D-rex protocol

text: Salmo salar

characteristic: organism

text: HoloFood

text: HoloFood Salmon - Host Transcriptome

text: RNAlater

text: UCPH

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SB11.26 from tank SB11 with treatment Mars

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Dønna; Nordland county

text: Distal gut tissue

text: Atlantic salmon

text: Sanford Blue Mussel Meal

text: Mars SB Blue mussel 0%

text: Wounded:-

text: Salmo salar

text: LetSea Tank: Mars

characteristic: host subject id

characteristic: host taxid

characteristic: host total mass

characteristic: library name

characteristic: library selection

text: D-rex protocol

characteristic: nucleic acid extraction

text: Salmo salar

text: HoloFood

characteristic: project

text: HoloFood Salmon - Host Transcriptome

characteristic: project name

characteristic: reference host genome for decontamination

text: RNAlater

characteristic: sample storage buffer

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: sequencing method

characteristic: trial timepoint


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SB11.27 from tank SB11 with treatment Mars

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut tissue

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

text: Sanford Blue Mussel Meal

characteristic: host diet

text: Mars SB Blue mussel 0%

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

characteristic: host length

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Mars

characteristic: host storage container

characteristic: host storage container pH

characteristic: host storage container temperature

text: D-rex protocol

text: Salmo salar

characteristic: organism

text: HoloFood

text: HoloFood Salmon - Host Transcriptome

text: RNAlater

text: UCPH

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SB11.28 from tank SB11 with treatment Mars

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Dønna; Nordland county

text: Distal gut tissue

text: Atlantic salmon

text: Sanford Blue Mussel Meal

text: Mars SB Blue mussel 0%

text: Wounded:-

text: Salmo salar

text: LetSea Tank: Mars

characteristic: host subject id

characteristic: host taxid

characteristic: host total mass

characteristic: library name

characteristic: library selection

text: D-rex protocol

characteristic: nucleic acid extraction

text: Salmo salar

text: HoloFood

characteristic: project

text: HoloFood Salmon - Host Transcriptome

characteristic: project name

characteristic: reference host genome for decontamination

text: RNAlater

characteristic: sample storage buffer

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: sequencing method

characteristic: trial timepoint


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SB11.29 from tank SB11 with treatment Mars

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut tissue

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

text: Sanford Blue Mussel Meal

characteristic: host diet

text: Mars SB Blue mussel 0%

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

characteristic: host length

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Mars

characteristic: host storage container

characteristic: host storage container pH

characteristic: host storage container temperature

text: D-rex protocol

text: Salmo salar

characteristic: organism

text: HoloFood

text: HoloFood Salmon - Host Transcriptome

text: RNAlater

text: UCPH

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SB11.30 from tank SB11 with treatment Mars

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Dønna; Nordland county

text: Distal gut tissue

text: Atlantic salmon

text: Sanford Blue Mussel Meal

text: Mars SB Blue mussel 0%

text: Wounded:-

text: Salmo salar

text: LetSea Tank: Mars

characteristic: host subject id

characteristic: host taxid

characteristic: host total mass

characteristic: library name

characteristic: library selection

text: D-rex protocol

characteristic: nucleic acid extraction

text: Salmo salar

text: HoloFood

characteristic: project

text: HoloFood Salmon - Host Transcriptome

characteristic: project name

characteristic: reference host genome for decontamination

text: RNAlater

characteristic: sample storage buffer

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: sequencing method

characteristic: trial timepoint


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: AGATCGGAAGAGCACACGTCTGAACTCCAGTCA;AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SB12.01 from tank SB12 with treatment Venus

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut tissue

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

text: Sanford Blue Mussel Meal

characteristic: host diet

text: Venus SB Blue mussel 8.7%

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

characteristic: host length

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Venus

characteristic: host storage container

characteristic: host storage container pH

characteristic: host storage container temperature

text: D-rex protocol

text: Salmo salar

characteristic: organism

text: HoloFood

text: HoloFood Salmon - Host Transcriptome

text: RNAlater

text: UCPH

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SB12.02 from tank SB12 with treatment Venus

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Dønna; Nordland county

text: Distal gut tissue

text: Atlantic salmon

text: Sanford Blue Mussel Meal

text: Venus SB Blue mussel 8.7%

text: Wounded:-

text: Salmo salar

text: LetSea Tank: Venus

characteristic: host subject id

characteristic: host taxid

characteristic: host total mass

text: Illumina Ribo-Zero Plus rRNA Depletion Kit + NEB Next Ultra RNA Library Prep Kit

characteristic: library name

characteristic: library selection

text: D-rex protocol

characteristic: nucleic acid extraction

text: Salmo salar

text: HoloFood

characteristic: project

text: HoloFood Salmon - Host Transcriptome

characteristic: project name

characteristic: reference host genome for decontamination

text: RNAlater

characteristic: sample storage buffer

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: sequencing method

characteristic: trial timepoint


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SB12.03 from tank SB12 with treatment Venus

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut tissue

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

text: Sanford Blue Mussel Meal

characteristic: host diet

text: Venus SB Blue mussel 8.7%

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

characteristic: host length

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Venus

characteristic: host storage container

characteristic: host storage container pH

characteristic: host storage container temperature

text: rRNA depletion + strand specific library

text: D-rex protocol

text: Salmo salar

characteristic: organism

text: HoloFood

text: HoloFood Salmon - Host Transcriptome

text: RNAlater

text: UCPH

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SB12.04 from tank SB12 with treatment Venus

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Dønna; Nordland county

text: Distal gut tissue

text: Atlantic salmon

text: Sanford Blue Mussel Meal

text: Venus SB Blue mussel 8.7%

text: Wounded:-

text: Salmo salar

text: LetSea Tank: Venus

characteristic: host subject id

characteristic: host taxid

characteristic: host total mass

characteristic: library name

characteristic: library selection

text: D-rex protocol

characteristic: nucleic acid extraction

text: Salmo salar

text: HoloFood

characteristic: project

text: HoloFood Salmon - Host Transcriptome

characteristic: project name

characteristic: reference host genome for decontamination

text: RNAlater

characteristic: sample storage buffer

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: sequencing method

characteristic: trial timepoint


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SB12.05 from tank SB12 with treatment Venus

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut tissue

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

text: Sanford Blue Mussel Meal

characteristic: host diet

text: Venus SB Blue mussel 8.7%

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

characteristic: host length

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Venus

characteristic: host storage container

characteristic: host storage container pH

characteristic: host storage container temperature

text: D-rex protocol

text: Salmo salar

characteristic: organism

text: HoloFood

text: HoloFood Salmon - Host Transcriptome

text: RNAlater

text: UCPH

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:FRIEDRICH-LOEFFLER-INSTITUT (FLI) Institute for Bacterial Infections and Zoonoses (IBIZ)

characteristic: Submitter Id

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: isolate

text: Francisella tularensis subsp. holarctica

characteristic: strain


text: FRIEDRICH-LOEFFLER-INSTITUT (FLI) Institute for Bacterial Infections and Zoonoses (IBIZ)

text: public

text: Germany


text: public

text: Germany

text: Brucella suis

text: Brucella suis


text: public

text: Germany

text: Bacillus anthracis

text: Bacillus anthracis


text: UPSC

text: public

text: N2-7 ivermectin

characteristic: description

text: Adult

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: N2-71G sample 1


text: UPSC

text: public

text: N2-7 ivermectin

text: Adult

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: N2-72G sample 2


text: UPSC

text: public

text: N2-7 ivermectin

text: Adult

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: N2-73G sample 3


text: UPSC

text: public

text: N2-7 ivermectin

text: Adult

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: N2-74G sample 4


text: UPSC

text: public

text: N2-8 ivermectin

text: Adult

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: N2-81G sample 1


text: UPSC

text: public

text: N2-8 ivermectin

text: Adult

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: N2-82G sample 2


text: UPSC

text: public

text: N2-8 ivermectin

text: Adult

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: N2-83G sample 3


text: UPSC

text: public

text: N2-8 ivermectin

text: Adult

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: N2-84G sample 4


text: UPSC

text: public

text: N2-D control

text: Adult

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: N2-D1G sample 1


text: UPSC

text: public

text: N2-D control

text: Adult

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: N2-D2G sample 2


text: UPSC

text: public

text: N2-D control

text: Adult

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: N2-D3G sample 3


text: UPSC

text: public

text: N2-D control

text: Adult

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: N2-D4G sample 4


text: Robert Koch Institute

text: public

tag: Namespace:Robert Koch Institute

characteristic: collection date

text: DAP-resistant MSSA patient isolate

text: Germany

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: wound

text: Staphylococcus aureus

text: Staphylococcus aureus

text: DAP-resistant S. aureus


characteristic: ENA-CHECKLIST

text: Robert Koch Institute

text: public

text: DAP-susceptible MSSA patient isolate

text: Germany

text: not provided

text: Homo sapiens

text: blood culture

text: Staphylococcus aureus

characteristic: organism

text: Staphylococcus aureus

text: DAP-susceptible S. aureus

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Robert Koch Institute

text: public

text: DAP-resistant MRSA patient isolate

text: Germany

text: not provided

text: Homo sapiens

text: screening

text: Staphylococcus aureus

text: Staphylococcus aureus

text: DAP-resistant S. aureus


text: Robert Koch Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: DAP-resistant MSSA patient isolate

text: Germany

text: not provided

text: Homo sapiens

text: intrasurgical

text: Staphylococcus aureus

text: Staphylococcus aureus

text: DAP-resistant S. aureus


text: Robert Koch Institute

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: DAP-susceptible MRSA patient isolate

text: Germany

text: not provided

text: Homo sapiens

text: screening

text: Staphylococcus aureus

text: Staphylococcus aureus

text: DAP-susceptible S. aureus


text: Robert Koch Institute

text: public

text: DAP-resistant MRSA patient isolate

text: Germany

characteristic: geographic location (country and/or sea)

text: not provided

text: Homo sapiens

characteristic: isolate

text: decubitus

text: Staphylococcus aureus

text: Staphylococcus aureus

text: DAP-resistant S. aureus


text: Robert Koch Institute

text: public

characteristic: collection date

text: DAP-susceptible MRSA patient isolate

characteristic: description

text: Germany

text: not provided

text: Homo sapiens

text: wound, deep

text: Staphylococcus aureus

text: Staphylococcus aureus

text: DAP-susceptible S. aureus


text: Robert Koch Institute

text: public

text: DAP-resistant MRSA patient isolate

text: Germany

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: wound

text: Staphylococcus aureus

text: Staphylococcus aureus

text: DAP-resistant S. aureus


characteristic: ENA-CHECKLIST

text: Robert Koch Institute

text: public

text: DAP-susceptible MRSA patient isolate

text: Germany

text: not provided

text: Homo sapiens

text: tissue

text: Staphylococcus aureus

characteristic: organism

text: Staphylococcus aureus

text: DAP-susceptible S. aureus


characteristic: ENA-FIRST-PUBLIC

text: Robert Koch Institute

text: public

text: DAP-susceptible MRSA patient isolate

text: Germany

text: not provided

text: Homo sapiens

text: wound, superficial

text: Staphylococcus aureus

text: Staphylococcus aureus

text: DAP-susceptible S. aureus

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Robert Koch Institute

text: public

text: DAP-susceptible MSSA patient isolate

text: Germany

text: not provided

text: Homo sapiens

text: screening

text: Staphylococcus aureus

text: Staphylococcus aureus

text: DAP-susceptible S. aureus


text: Robert Koch Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: DAP-resistant MSSA patient isolate

text: Germany

text: not provided

text: Homo sapiens

text: skin

text: Staphylococcus aureus

text: Staphylococcus aureus

text: DAP-resistant S. aureus


text: Robert Koch Institute

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: DAP-resistant MSSA patient isolate

text: Germany

text: not provided

text: Homo sapiens

text: eye

text: Staphylococcus aureus

text: Staphylococcus aureus

text: DAP-resistant S. aureus


text: Robert Koch Institute

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: DAP-susceptible MRSA patient isolate

text: Germany

text: not provided

text: Homo sapiens

text: Staphylococcus aureus

text: Staphylococcus aureus

text: DAP-susceptible S. aureus


text: Robert Koch Institute

text: public

text: DAP-susceptible MRSA patient isolate

text: Germany

characteristic: geographic location (country and/or sea)

text: not provided

text: Homo sapiens

characteristic: isolate

text: intrasurgical

text: Staphylococcus aureus

text: Staphylococcus aureus

text: DAP-susceptible S. aureus


text: Robert Koch Institute

text: public

characteristic: collection date

text: DAP-resistant MSSA patient isolate

characteristic: description

text: Germany

text: not provided

text: Homo sapiens

text: drain

text: Staphylococcus aureus

text: Staphylococcus aureus

text: DAP-resistant S. aureus


text: Robert Koch Institute

text: public

text: DAP-resistant MRSA patient isolate

text: Germany

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: wound, superficial

text: Staphylococcus aureus

text: Staphylococcus aureus

text: DAP-resistant S. aureus


characteristic: ENA-CHECKLIST

text: Robert Koch Institute

text: public

text: DAP-resistant MSSA isolate obtained after PHMB-selection

text: Germany

text: not provided

text: Homo sapiens

text: in vitro selection with PHMB

text: Staphylococcus aureus

characteristic: organism

text: Staphylococcus aureus

text: DAP-resistant S. aureus


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF CAMBRIDGE

text: public

tag: Namespace:UNIVERSITY OF CAMBRIDGE

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default parameters, kmer: 4

characteristic: binning parameters

text: metaWRAP (MetaBAT2, MaxBin2 and CONCOCT)

characteristic: binning software

text: mouse gut

characteristic: broad-scale environmental context

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Faeces

characteristic: environmental medium

text: United Kingdom

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Faeces

text: mouse-associated habitat

characteristic: local environmental context

text: mouse gut metagenome

characteristic: metagenomic source

text: uncultured Muribaculaceae bacterium

text: Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue

characteristic: project name

characteristic: sample derived from

text: uncultured Muribaculaceae bacterium

text: Illumina

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF BRITISH COLUMBIA

characteristic: Submitter Id

text: homo sapiens

characteristic: collection date

text: Infant stool metagenomic dataset

characteristic: description

text: stool

text: Zimbabwe

characteristic: geographic location (country and/or sea)

characteristic: host age

text: stool

characteristic: host body product

text: female

characteristic: host sex

text: human gut

text: human gut metagenome

characteristic: organism

text: SHINE

text: human gut metagenome

text: stool


characteristic: ENA-CHECKLIST

text: UNIVERSITY OF BRITISH COLUMBIA

text: public

text: homo sapiens

characteristic: broad-scale environmental context

text: Infant stool metagenomic dataset

text: stool

characteristic: environmental medium

text: Zimbabwe

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

text: male

text: human gut

characteristic: local environmental context

text: human gut metagenome

text: SHINE

characteristic: project name

text: human gut metagenome

text: stool

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRITISH COLUMBIA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: homo sapiens

text: Infant stool metagenomic dataset

text: stool

text: Zimbabwe

text: stool

text: female

text: human gut

text: human gut metagenome

text: SHINE

text: human gut metagenome

text: stool


text: UNIVERSITY OF BRITISH COLUMBIA

text: public

characteristic: Submitter Id

text: homo sapiens

characteristic: collection date

text: Infant stool metagenomic dataset

characteristic: description

text: stool

text: Zimbabwe

characteristic: geographic location (country and/or sea)

text: stool

characteristic: host body product

text: male

characteristic: host sex

text: human gut

text: human gut metagenome

characteristic: organism

text: SHINE

text: human gut metagenome

text: stool


characteristic: ENA-CHECKLIST

text: GHENT UNIVERSITY

text: public

tag: Namespace:GHENT UNIVERSITY

text: pig

characteristic: common name

text: Farm10 AgeGroup4

text: Sus scrofa

text: Sus scrofa


characteristic: ENA-FIRST-PUBLIC

text: GHENT UNIVERSITY

text: public

text: pig

text: Farm10 AgeGroup5

text: Sus scrofa

text: Sus scrofa

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

text: public

text: pig

text: Farm10 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: pig

text: Farm10 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: pig

text: Farm11 AgeGroup4

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: pig

text: Farm11 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm11 AgeGroup6

characteristic: description

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm11 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm12 AgeGroup4

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm12 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm12 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm12 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm13 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm13 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm13 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm14 AgeGroup4

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm14 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm14 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm14 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm15 AgeGroup4

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm15 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm15 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm15 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm16 AgeGroup4

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm16 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm16 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm16 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm17 AgeGroup4

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm17 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm17 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm17 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm18 AgeGroup4

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm18 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm18 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm18 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm19 AgeGroup4

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm19 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm19 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm19 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm1 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm1 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm1 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm20 AgeGroup4

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm20 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm20 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm20 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm21 AgeGroup4

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm21 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm21 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm21 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm22 AgeGroup4

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm22 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm22 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm22 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm23 AgeGroup4

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm23 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm23 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm23 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm24 AgeGroup4

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm24 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm24 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm24 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm25 AgeGroup4

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm25 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm25 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm25 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm2 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm2 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm2 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm3 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm3 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm3 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm4 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm4 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm4 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm5 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm5 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm5 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm6 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm6 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm6 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm7 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm7 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm7 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm8 AgeGroup4

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm8 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm8 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm8 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm9 AgeGroup4

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm9 AgeGroup5

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm9 AgeGroup6

text: Sus scrofa

text: Sus scrofa


text: GHENT UNIVERSITY

text: public

text: pig

text: Farm9 AgeGroup7

text: Sus scrofa

text: Sus scrofa


text: MHH

text: public

text: ena-SAMPLE-TAB-30-01-2023-12:20:16:586-15489

text: human-associated metagenome

characteristic: broad-scale environmental context

characteristic: collection date

text: zero control

text: sampling material and buffers

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human-associated environmental package

text: metagenome

characteristic: investigation type

text: human airways (healthy control)

characteristic: local environmental context

text: human lung metagenome

text: human airways metagenome

characteristic: project name

text: human lung metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Wageningen University & Research

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:Wageningen University & Research

text: tomato

characteristic: common name

text: Solanum lycopersicon C.mic-NCPP382 Resistant/Tolerant pool

text: 950 MB

characteristic: estimated size

text: Netherlands

characteristic: isolation and growth condition

characteristic: number of replicons

text: Solanum lycopersicum

characteristic: organism

text: tomato

characteristic: organism common name

characteristic: plant developmental stage

text: soil

characteristic: plant growth medium

characteristic: plant structure

characteristic: ploidy

text: Solanum lycopersicum

text: tomato C.mic-NCPP382 resistant pool

characteristic: title


characteristic: ENA-CHECKLIST

text: Wageningen University & Research

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: tomato

text: Solanum lycopersicon C.mic-NCPP382 Susceptible pool

characteristic: description

text: 950 MB

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Solanum lycopersicum

text: tomato

text: soil

text: Solanum lycopersicum

text: tomato C.mic-NCPP382 susceptible pool


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: AGATCGGAAGAGCACACGTCTGAACTCCAGTCA;AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

characteristic: adapters

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SA01.14 from tank SA01 with treatment Tiger

text: Norway

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut tissue

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

text: Fermented algae meal (added in in oil coating)

characteristic: host diet

text: Tiger SA Seaweed 0%

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

characteristic: host length

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Tiger

characteristic: host storage container

characteristic: host storage container pH

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

characteristic: host total mass

characteristic: library name

characteristic: library selection

text: D-rex protocol

characteristic: nucleic acid extraction

text: Salmo salar

characteristic: organism

text: HoloFood

characteristic: project

text: HoloFood Salmon - Host Transcriptome

characteristic: project name

characteristic: reference host genome for decontamination

text: RNAlater

characteristic: sample storage buffer

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: sequencing method

characteristic: trial timepoint


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SA01.15 from tank SA01 with treatment Tiger

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut tissue

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

characteristic: host diet

text: Tiger SA Seaweed 0%

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

characteristic: host length

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Tiger

characteristic: host storage container

characteristic: host storage container pH

characteristic: host storage container temperature

characteristic: host subject id

text: Illumina Ribo-Zero Plus rRNA Depletion Kit + NEB Next Ultra RNA Library Prep Kit

text: D-rex protocol

text: Salmo salar

text: HoloFood

text: HoloFood Salmon - Host Transcriptome

text: RNAlater

text: UCPH

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: title

value: Fermented algae meal (added in in oil coating)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SA01.17 from tank SA01 with treatment Tiger

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Dønna; Nordland county

text: Distal gut tissue

text: Atlantic salmon

text: Tiger SA Seaweed 0%

text: Wounded:-

text: Salmo salar

text: LetSea Tank: Tiger

characteristic: host taxid

characteristic: host total mass

characteristic: library name

text: rRNA depletion + strand specific library

characteristic: library selection

text: D-rex protocol

characteristic: nucleic acid extraction

text: Salmo salar

characteristic: organism

text: HoloFood

characteristic: project

text: HoloFood Salmon - Host Transcriptome

characteristic: project name

characteristic: reference host genome for decontamination

text: RNAlater

characteristic: sample storage buffer

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: sequencing method

characteristic: trial timepoint


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SA01.18 from tank SA01 with treatment Tiger

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut tissue

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

characteristic: host diet

text: Tiger SA Seaweed 0%

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

characteristic: host length

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Tiger

characteristic: host storage container

characteristic: host storage container pH

characteristic: host storage container temperature

characteristic: host subject id

text: D-rex protocol

text: Salmo salar

text: HoloFood

text: HoloFood Salmon - Host Transcriptome

text: RNAlater

text: UCPH

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SA01.22 from tank SA01 with treatment Tiger

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Dønna; Nordland county

text: Distal gut tissue

text: Atlantic salmon

text: Tiger SA Seaweed 0%

text: Wounded:-

text: Salmo salar

text: LetSea Tank: Tiger

characteristic: host taxid

characteristic: host total mass

characteristic: library name

characteristic: library selection

text: D-rex protocol

characteristic: nucleic acid extraction

text: Salmo salar

characteristic: organism

text: HoloFood

characteristic: project

text: HoloFood Salmon - Host Transcriptome

characteristic: project name

characteristic: reference host genome for decontamination

text: RNAlater

characteristic: sample storage buffer

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: sequencing method

characteristic: trial timepoint


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SA01.25 from tank SA01 with treatment Tiger

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut tissue

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

characteristic: host diet

text: Tiger SA Seaweed 0%

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

characteristic: host length

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Tiger

characteristic: host storage container

characteristic: host storage container pH

characteristic: host storage container temperature

characteristic: host subject id

text: D-rex protocol

text: Salmo salar

text: HoloFood

text: HoloFood Salmon - Host Transcriptome

text: RNAlater

text: UCPH

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SA01.28 from tank SA01 with treatment Tiger

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Dønna; Nordland county

text: Distal gut tissue

text: Atlantic salmon

text: Tiger SA Seaweed 0%

text: Wounded:-

text: Salmo salar

text: LetSea Tank: Tiger

characteristic: host taxid

characteristic: host total mass

characteristic: library name

characteristic: library selection

text: D-rex protocol

characteristic: nucleic acid extraction

text: Salmo salar

characteristic: organism

text: HoloFood

characteristic: project

text: HoloFood Salmon - Host Transcriptome

characteristic: project name

characteristic: reference host genome for decontamination

text: RNAlater

characteristic: sample storage buffer

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: sequencing method

characteristic: trial timepoint


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SA02.12 from tank SA02 with treatment Jaguar

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut tissue

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

characteristic: host diet

text: Jaguar SA Seaweed 2%

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

characteristic: host length

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Jaguar

characteristic: host storage container

characteristic: host storage container pH

characteristic: host storage container temperature

characteristic: host subject id

text: D-rex protocol

text: Salmo salar

text: HoloFood

text: HoloFood Salmon - Host Transcriptome

text: RNAlater

text: UCPH

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SA02.13 from tank SA02 with treatment Jaguar

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Dønna; Nordland county

text: Distal gut tissue

text: Atlantic salmon

text: Jaguar SA Seaweed 2%

text: Wounded:-

text: Salmo salar

text: LetSea Tank: Jaguar

characteristic: host taxid

characteristic: host total mass

characteristic: library name

characteristic: library selection

text: D-rex protocol

characteristic: nucleic acid extraction

text: Salmo salar

characteristic: organism

text: HoloFood

characteristic: project

text: HoloFood Salmon - Host Transcriptome

characteristic: project name

characteristic: reference host genome for decontamination

text: RNAlater

characteristic: sample storage buffer

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: sequencing method

characteristic: trial timepoint


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SA02.19 from tank SA02 with treatment Jaguar

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut tissue

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

characteristic: host diet

text: Jaguar SA Seaweed 2%

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

characteristic: host length

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Jaguar

characteristic: host storage container

characteristic: host storage container pH

characteristic: host storage container temperature

characteristic: host subject id

text: D-rex protocol

text: Salmo salar

text: HoloFood

text: HoloFood Salmon - Host Transcriptome

text: RNAlater

text: UCPH

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SA02.24 from tank SA02 with treatment Jaguar

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Dønna; Nordland county

text: Distal gut tissue

text: Atlantic salmon

text: Jaguar SA Seaweed 2%

text: Wounded:-

text: Salmo salar

text: LetSea Tank: Jaguar

characteristic: host taxid

characteristic: host total mass

characteristic: library name

characteristic: library selection

text: D-rex protocol

characteristic: nucleic acid extraction

text: Salmo salar

characteristic: organism

text: HoloFood

characteristic: project

text: HoloFood Salmon - Host Transcriptome

characteristic: project name

characteristic: reference host genome for decontamination

text: RNAlater

characteristic: sample storage buffer

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: sequencing method

characteristic: trial timepoint


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SA06.15 from tank SA06 with treatment Tiger

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut tissue

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

characteristic: host diet

text: Tiger SA Seaweed 0%

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

characteristic: host length

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Tiger

characteristic: host storage container

characteristic: host storage container pH

characteristic: host storage container temperature

characteristic: host subject id

text: D-rex protocol

text: Salmo salar

text: HoloFood

text: HoloFood Salmon - Host Transcriptome

text: RNAlater

text: UCPH

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SA06.17 from tank SA06 with treatment Tiger

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Dønna; Nordland county

text: Distal gut tissue

text: Atlantic salmon

text: Tiger SA Seaweed 0%

text: Wounded:-

text: Salmo salar

text: LetSea Tank: Tiger

characteristic: host taxid

characteristic: host total mass

characteristic: library name

characteristic: library selection

text: D-rex protocol

characteristic: nucleic acid extraction

text: Salmo salar

characteristic: organism

text: HoloFood

characteristic: project

text: HoloFood Salmon - Host Transcriptome

characteristic: project name

characteristic: reference host genome for decontamination

text: RNAlater

characteristic: sample storage buffer

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: sequencing method

characteristic: trial timepoint


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: AGATCGGAAGAGCACACGTCTGAACTCCAGTCA;AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SA06.25 from tank SA06 with treatment Tiger

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut tissue

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

characteristic: host diet

text: Tiger SA Seaweed 0%

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

characteristic: host length

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Tiger

characteristic: host storage container

characteristic: host storage container pH

characteristic: host storage container temperature

characteristic: host subject id

text: D-rex protocol

text: Salmo salar

text: HoloFood

text: HoloFood Salmon - Host Transcriptome

text: RNAlater

text: UCPH

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SA07.25 from tank SA07 with treatment Jaguar

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Dønna; Nordland county

text: Distal gut tissue

text: Atlantic salmon

text: Fermented algae meal (added in in oil coating)

text: Jaguar SA Seaweed 2%

text: Wounded:-

text: Salmo salar

text: LetSea Tank: Jaguar

characteristic: host taxid

characteristic: host total mass

characteristic: library name

characteristic: library selection

text: D-rex protocol

characteristic: nucleic acid extraction

text: Salmo salar

characteristic: organism

text: HoloFood

characteristic: project

text: HoloFood Salmon - Host Transcriptome

characteristic: project name

characteristic: reference host genome for decontamination

text: RNAlater

characteristic: sample storage buffer

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: sequencing method

characteristic: trial timepoint


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SB06.25 from tank SB06 with treatment Mars

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut tissue

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

text: Sanford Blue Mussel Meal

characteristic: host diet

text: Mars SB Blue mussel 0%

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

characteristic: host length

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Mars

characteristic: host storage container

characteristic: host storage container pH

characteristic: host storage container temperature

characteristic: host subject id

text: Illumina Ribo-Zero Plus rRNA Depletion Kit + NEB Next Ultra RNA Library Prep Kit

text: D-rex protocol

text: Salmo salar

text: HoloFood

text: HoloFood Salmon - Host Transcriptome

text: RNAlater

text: UCPH

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SB07.11 from tank SB07 with treatment Neptune

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Dønna; Nordland county

text: Distal gut tissue

text: Atlantic salmon

text: Sanford Blue Mussel Meal

text: Neptune SB Blue mussel 13.1%

text: Wounded:-

text: Salmo salar

text: LetSea Tank: Neptune

characteristic: host taxid

characteristic: host total mass

characteristic: library name

text: rRNA depletion + strand specific library

characteristic: library selection

text: D-rex protocol

characteristic: nucleic acid extraction

text: Salmo salar

characteristic: organism

text: HoloFood

characteristic: project

text: HoloFood Salmon - Host Transcriptome

characteristic: project name

characteristic: reference host genome for decontamination

text: RNAlater

characteristic: sample storage buffer

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: sequencing method

characteristic: trial timepoint


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host transcriptome data from Distal gut tissue; animal SB07.14 from tank SB07 with treatment Neptune

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut tissue

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

text: Sanford Blue Mussel Meal

characteristic: host diet

text: Neptune SB Blue mussel 13.1%

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

characteristic: host length

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Neptune

characteristic: host storage container

characteristic: host storage container pH

characteristic: host storage container temperature

characteristic: host subject id

text: D-rex protocol

text: Salmo salar

text: HoloFood

text: HoloFood Salmon - Host Transcriptome

text: RNAlater

text: UCPH

text: Salmo salar

text: Illumina Novaseq 6000

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host genomic data from Distal gut content; animal SC01.01 from tank SC01 with treatment Måse

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Dønna; Nordland county

text: Distal gut content

text: Atlantic salmon

text: Ensilaged blue mussel protein

text: Måse: SC Ensilaged blue mussel 2.5%

text: Wounded:-

text: Salmo salar

text: LetSea Tank: Måse

characteristic: host taxid

characteristic: host total mass

text: BEST

characteristic: library name

text: PCR

characteristic: library selection

text: D-rex protocol

characteristic: nucleic acid extraction

text: Salmo salar

characteristic: organism

text: HoloFood

characteristic: project

text: HoloFood Salmon - Host Genome

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: 2ml E-matrix

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: Salmo salar

characteristic: sequencing method

characteristic: trial timepoint

value: genomics

value: Trial C: Blue mussel ensilage-dose response


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host genomic data from Distal gut content; animal SC01.02 from tank SC01 with treatment Måse

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut content

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

text: Ensilaged blue mussel protein

characteristic: host diet

text: Måse: SC Ensilaged blue mussel 2.5%

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

characteristic: host length

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Måse

characteristic: host storage container

characteristic: host storage container pH

characteristic: host storage container temperature

characteristic: host subject id

text: BEST

text: PCR

text: D-rex protocol

text: Salmo salar

text: HoloFood

text: HoloFood Salmon - Host Genome

text: Shield

text: 2ml E-matrix

text: UCPH

text: Salmo salar

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host genomic data from Distal gut content; animal SC01.03 from tank SC01 with treatment Måse

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Dønna; Nordland county

text: Distal gut content

text: Atlantic salmon

text: Ensilaged blue mussel protein

text: Måse: SC Ensilaged blue mussel 2.5%

text: Wounded:-

text: Salmo salar

text: LetSea Tank: Måse

characteristic: host taxid

characteristic: host total mass

text: BEST

characteristic: library name

text: PCR

characteristic: library selection

text: D-rex protocol

characteristic: nucleic acid extraction

text: Salmo salar

characteristic: organism

text: HoloFood

characteristic: project

text: HoloFood Salmon - Host Genome

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: 2ml E-matrix

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

text: Salmo salar

characteristic: sequencing method

characteristic: trial timepoint

value: distal gut content


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Atlantic salmon

characteristic: common name

text: Salmon host genomic data from Distal gut content; animal SC01.04 from tank SC01 with treatment Måse

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut content

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

text: Ensilaged blue mussel protein

characteristic: host diet

text: Måse: SC Ensilaged blue mussel 2.5%

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

characteristic: host length

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Måse

characteristic: host storage container

characteristic: host storage container pH

characteristic: host storage container temperature

characteristic: host subject id

text: BEST

text: PCR

text: D-rex protocol

text: Salmo salar

text: HoloFood

text: HoloFood Salmon - Host Genome

text: Shield

text: 2ml E-matrix

text: UCPH

text: Salmo salar

characteristic: title