characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

characteristic: INSDC last update

text: public

text: yes

characteristic: Is the sequenced pathogen host associated?

text: DTU-GE

characteristic: broker name

text: KCRI

text: No

text: Tanzania

text: not provided

text: homo sapiens

text: staphylococcus aureus

text: nasal swab

text: Staphylococcus aureus

text: Staphylococcus aureus

characteristic: title


status: PUBLIC

tag: attribute

characteristic: ENA-FIRST-PUBLIC

text: DTU-GE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: yes

characteristic: SRA accession

characteristic: Submitter Id

text: DTU-GE

text: KCRI

characteristic: description

text: No

text: Tanzania

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: not provided

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: staphylococcus aureus

characteristic: isolate

text: nasal swab

characteristic: isolation source host-associated

text: Staphylococcus aureus

characteristic: organism

text: Staphylococcus aureus

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: DTU-GE

characteristic: INSDC last update

text: public

text: yes

characteristic: Is the sequenced pathogen host associated?

text: DTU-GE

characteristic: broker name

text: KCRI

text: No

text: Tanzania

text: not provided

text: bos taurus

text: staphylococcus aureus

text: milk

text: Staphylococcus aureus

text: Staphylococcus aureus

characteristic: title


E-MTAB-12648:Sample 1

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12648:Sample 1

tag: Namespace:Division of Life Sciences, Korea University

characteristic: Submitter Id

unit: day

characteristic: age

text: ArrayExpress

text: thale cress

characteristic: common name

text: Protocols: Shoot apices was sampled by stem-root cuttings from 7-d-old whole seedlings using the micro vannas scissors. Plants were grown on 1/2 MS medium at 23 °C LD conditions at a light intensity of 120 μmol m-2 s-1. Total RNA was extracted from shoot apices of 7-d-old whole seedlings using TRIzol Reagent. We check total RNA integrity using Agilent 2100 BioAnalyzer with RNA Integrity Number (RIN) value greater than 6. RNA-seq libraries were constructed for 12 RNA samples by following instructions for a TruSeq RNA library preparation Illumina (https://www.illumina.com, 1000000040498 v00).

characteristic: description

text: seedling development stage

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot axis apex

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 1


E-MTAB-12648:Sample 10

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Division of Life Sciences, Korea University

text: public

text: E-MTAB-12648:Sample 10

text: ArrayExpress

text: thale cress

text: seedling development stage

text: At4G36690 homozygous knockout

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: shoot axis apex

text: Arabidopsis thaliana

text: Sample 10


E-MTAB-12648:Sample 11

characteristic: INSDC last update

text: public

text: E-MTAB-12648:Sample 11

text: ArrayExpress

characteristic: broker name

text: thale cress

text: seedling development stage

text: At4G36690 homozygous knockout

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot axis apex

text: Arabidopsis thaliana

text: Sample 11

characteristic: title


E-MTAB-12648:Sample 12

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-12648:Sample 12

text: ArrayExpress

text: thale cress

text: seedling development stage

text: At1G60900 homozygous knockout

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot axis apex

text: Arabidopsis thaliana

text: Sample 12


E-MTAB-12648:Sample 2

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12648:Sample 2

characteristic: Submitter Id

text: ArrayExpress

text: thale cress

text: seedling development stage

text: At4G36690 homozygous knockout

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot axis apex

text: Arabidopsis thaliana

text: Sample 2


E-MTAB-12648:Sample 3

text: public

text: E-MTAB-12648:Sample 3

characteristic: age

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: description

text: seedling development stage

text: At4G36690 homozygous knockout

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot axis apex

text: Arabidopsis thaliana

text: Sample 3


E-MTAB-12648:Sample 4

text: public

text: E-MTAB-12648:Sample 4

text: ArrayExpress

text: thale cress

text: seedling development stage

characteristic: developmental stage

text: At1G60900 homozygous knockout

characteristic: genotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot axis apex

characteristic: organism part

text: Arabidopsis thaliana

text: Sample 4


E-MTAB-12648:Sample 5

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-12648:Sample 5

text: ArrayExpress

text: thale cress

text: seedling development stage

text: wild type genotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot axis apex

text: Arabidopsis thaliana

text: Sample 5


E-MTAB-12648:Sample 6

characteristic: INSDC last update

text: public

text: E-MTAB-12648:Sample 6

text: ArrayExpress

characteristic: broker name

text: thale cress

text: seedling development stage

text: At4G36690 homozygous knockout

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: shoot axis apex

text: Arabidopsis thaliana

text: Sample 6


E-MTAB-12648:Sample 7

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

text: public

text: E-MTAB-12648:Sample 7

text: ArrayExpress

text: thale cress

text: seedling development stage

text: At4G36690 homozygous knockout

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot axis apex

text: Arabidopsis thaliana

text: Sample 7

characteristic: title


E-MTAB-12648:Sample 8

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12648:Sample 8

text: ArrayExpress

text: thale cress

text: seedling development stage

text: At1G60900 homozygous knockout

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot axis apex

text: Arabidopsis thaliana

text: Sample 8


E-MTAB-12648:Sample 9

text: public

text: E-MTAB-12648:Sample 9

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: thale cress

characteristic: common name

text: seedling development stage

text: wild type genotype

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot axis apex

text: Arabidopsis thaliana

text: Sample 9


text: public

tag: Namespace:Instut Mediterraneen de Biodiversite et d ecologie marine et continentale

text: Sponge tissue

characteristic: description

text: Mediterranean Sea

unit: Mediterranean Sea

characteristic: geographic location (country and/or sea)

text: Marseille

unit: Marseille

characteristic: geographic location (region and locality)

text: Agelas oroides

text: Agelas oroides

text: Ectosome


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: Instut Mediterraneen de Biodiversite et d ecologie marine et continentale

text: public

text: Sponge tissue

text: Mediterranean Sea

text: Marseille

text: Agelas oroides

text: Agelas oroides

text: Ectosome


characteristic: External Id

characteristic: INSDC last update

text: public

text: Sponge tissue

text: Mediterranean Sea

text: Marseille

text: Agelas oroides

text: Agelas oroides

text: Fragment


text: public

text: Sponge tissue

text: Mediterranean Sea

text: Marseille

text: Agelas oroides

characteristic: organism

text: Agelas oroides

text: Endosome


characteristic: ENA-FIRST-PUBLIC

text: public

text: Sponge tissue

text: Mediterranean Sea

text: Marseille

text: Aplysina cavernicola

text: Aplysina cavernicola

text: Fragment


name: E-MTAB-12597:Alu blocking Control, CEBPA replicate 1

characteristic: INSDC center name

text: public

tag: Namespace:Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Computational Biology and Health Genomics

unit: year

text: ArrayExpress

characteristic: broker name

text: B cell

text: human

text: Protocols: For Alu blocking and CEBPA overexpression ChIP-Seq experiments, cells were collected 3h after induction of transdifferentiation. Human BLaER1 cells were grown in RPMI (Invitrogen) supplemented with 10% heat-inactivated fetal bovine serum, 2 mM L-glutamine, and 100 U/ml penicillin G sodium. 3 hours of transdifferentiation was induced in BlaER1 by addition of 100nM of β-estradiol (Calbiochem) and grown with 10nM of IL-3 and CSF-1 (Peprotech). Cells were crosslinked with 1% formaldehyde for 10 minutes at room temperature and sheared with a Qsonica sonicator. 5 μg o f chromatin and 0.5 μg of antibody against rat CEBPA (sc-61 X, Santa Cruz) were incubated in RIPA buffer (140 mM NaCl, 10 mM Tris HCl pH 8.0, 1 mM EDTA, 1 % Triton X-100, 0.1 % SDS, 0.1 % Na deoxycholate, protease inhibitors). DNA libraries were prepared with 1 ng of purified ChIP using NEBNext DNA Library kit for Illumina following the manufacturer’s protocol.

text: Epstein-Barr virus-related Burkitts lymphoma

characteristic: disease

text: scrambled gRNA

characteristic: genetic modification

text: wild type genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: organism part

characteristic: replicate

text: Homo sapiens

text: female

characteristic: sex

text: Alu blocking Control, CEBPA replicate 1


name: E-MTAB-12597:Alu blocking Control, CEBPA replicate 2

text: Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Computational Biology and Health Genomics

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: B cell

text: human

characteristic: common name

characteristic: description

text: scrambled gRNA

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: female

text: Alu blocking Control, CEBPA replicate 2

characteristic: title


name: E-MTAB-12597:Alu blocking Control, Input replicate 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

text: ArrayExpress

text: B cell

text: human

text: scrambled gRNA

text: wild type genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: female

text: Alu blocking Control, Input replicate 1


name: E-MTAB-12597:Alu blocking Control, Input replicate 2

characteristic: INSDC center name

text: public

text: ArrayExpress

characteristic: broker name

text: B cell

text: human

characteristic: disease

text: scrambled gRNA

characteristic: genetic modification

text: wild type genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: organism part

text: Homo sapiens

text: female

text: Alu blocking Control, Input replicate 2


name: E-MTAB-12597:Alu blocking with Alu1, CEBPA replicate 1

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: B cell

text: human

text: gRNA construct Alu1

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: replicate

text: Homo sapiens

text: female

characteristic: sex


name: E-MTAB-12597:Alu blocking with Alu1, CEBPA replicate 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: age

text: ArrayExpress

text: B cell

text: human

characteristic: common name

characteristic: description

text: gRNA construct Alu1

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: female

characteristic: title


name: E-MTAB-12597:Alu blocking with Alu1, Input replicate 1

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: ArrayExpress

characteristic: broker name

text: B cell

text: human

text: gRNA construct Alu1

text: wild type genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: female


name: E-MTAB-12597:Alu blocking with Alu1, Input replicate 2

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: ArrayExpress

text: B cell

text: human

characteristic: disease

text: gRNA construct Alu1

characteristic: genetic modification

text: wild type genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: organism part

text: Homo sapiens

text: female


name: E-MTAB-12597:Alu blocking with Alu2, CEBPA replicate 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: B cell

text: human

text: gRNA construct Alu2

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: replicate

text: Homo sapiens

text: female

characteristic: sex


name: E-MTAB-12597:Alu blocking with Alu2, CEBPA replicate 2

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: age

text: ArrayExpress

text: B cell

text: human

characteristic: common name

characteristic: description

text: gRNA construct Alu2

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: female

characteristic: title


name: E-MTAB-12597:Alu blocking with Alu2, Input replicate 1

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

characteristic: broker name

text: B cell

text: human

text: gRNA construct Alu2

text: wild type genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: female


name: E-MTAB-12597:Alu blocking with Alu2, Input replicate 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: ArrayExpress

text: B cell

text: human

characteristic: disease

text: gRNA construct Alu2

characteristic: genetic modification

text: wild type genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: organism part

text: Homo sapiens

text: female


name: E-MTAB-12597:CEBPA overexpression, Control, CEBPA replicate 1

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: B cell

text: human

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: replicate

text: Homo sapiens

text: female

characteristic: sex


name: E-MTAB-12597:CEBPA overexpression, Control, CEBPA replicate 2

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: age

text: ArrayExpress

text: B cell

text: human

characteristic: common name

characteristic: description

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: female

characteristic: title


name: E-MTAB-12597:CEBPA overexpression, Control, Input replicate 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

characteristic: broker name

text: B cell

text: human

text: wild type genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: female


name: E-MTAB-12597:CEBPA overexpression, Control, Input replicate 2

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: ArrayExpress

text: B cell

text: human

characteristic: disease

text: wild type genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: organism part

text: Homo sapiens

text: female


name: E-MTAB-12597:CEBPA overexpression, High dose, CEBPA replicate 1

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: B cell

text: human

text: overexpressed CEBPA in a high dose

characteristic: genetic modification

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: replicate

text: Homo sapiens

text: female

characteristic: sex


name: E-MTAB-12597:CEBPA overexpression, High dose, CEBPA replicate 2

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

text: public

characteristic: age

text: ArrayExpress

text: B cell

text: human

characteristic: common name

characteristic: description

text: overexpressed CEBPA in a high dose

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: female

characteristic: title


name: E-MTAB-12597:CEBPA overexpression, High dose, Input replicate 1

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

characteristic: broker name

text: B cell

text: human

text: overexpressed CEBPA in a high dose

text: wild type genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: female


name: E-MTAB-12597:CEBPA overexpression, High dose, Input replicate 2

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: ArrayExpress

text: B cell

text: human

characteristic: disease

text: overexpressed CEBPA in a high dose

text: wild type genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: organism part

text: Homo sapiens

text: female


name: E-MTAB-12597:CEBPA overexpression, Low dose, CEBPA replicate 1

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: ArrayExpress

text: B cell

text: human

text: overexpressed CEBPA in a low dose

characteristic: genetic modification

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: replicate

text: Homo sapiens

text: female

characteristic: sex


name: E-MTAB-12597:CEBPA overexpression, Low dose, CEBPA replicate 2

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: age

text: ArrayExpress

text: B cell

text: human

characteristic: common name

characteristic: description

text: overexpressed CEBPA in a low dose

text: wild type genotype

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: female

characteristic: title


name: E-MTAB-12597:CEBPA overexpression, Low dose, Input replicate 1

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

characteristic: broker name

text: B cell

text: human

text: overexpressed CEBPA in a low dose

text: wild type genotype

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: female


name: E-MTAB-12597:CEBPA overexpression, Low dose, Input replicate 2

characteristic: ENA-CHECKLIST

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ArrayExpress

text: B cell

text: human

characteristic: disease

text: overexpressed CEBPA in a low dose

text: wild type genotype

characteristic: genotype

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: organism part

text: Homo sapiens

text: female


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of Florence

text: public

tag: Namespace:University of Florence

characteristic: Submitter Id

text: organism substance

characteristic: broad-scale environmental context

characteristic: collection date

text: Human vaginal fluid

text: vaginal fluid

characteristic: environmental medium

text: Italy

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: bodily fluid

characteristic: local environmental context

text: human metagenome

text: Vaginal microbiota in pregnant women with different cervix lenght

characteristic: project name

text: human metagenome

text: MiSeq

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: Human metagenome


characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

text: Manually refined metagenome-assembled genome derived from a water column sample collected in the Fram Strait/West Spitsbergen region, specifically derived from ERS14356888,ERR10946522

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: sample derived from

text: uncultured bacterium

text: 16S rRNA gene and multi-gene marker approach

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_101_1

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Planktomarina sp.

text: FRAM_WSC20 metagenomes

characteristic: project name

text: uncultured Planktomarina sp.

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_107_1


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Pseudomonadales bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: sample derived from

text: uncultured Pseudomonadales bacterium

text: Multi-gene marker approach

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_110_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Verrucomicrobiales bacterium

text: FRAM_WSC20 metagenomes

text: uncultured Verrucomicrobiales bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_129_1

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Ilumatobacter sp.

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

characteristic: sample derived from

text: uncultured Ilumatobacter sp.

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_14_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: Candidatus Poseidoniaceae archaeon

text: FRAM_WSC20 metagenomes

text: Candidatus Poseidoniaceae archaeon

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_147_1


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Rhodobacteraceae bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

text: uncultured Rhodobacteraceae bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_157_1

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured PS1 clade bacterium

text: FRAM_WSC20 metagenomes

characteristic: sample derived from

text: uncultured PS1 clade bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_158_1


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Planktomarina sp.

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

text: uncultured Planktomarina sp.

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_160_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Alphaproteobacteria bacterium

text: FRAM_WSC20 metagenomes

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_170_1

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Woeseiaceae bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

characteristic: sample derived from

text: uncultured Woeseiaceae bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_28_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: Candidatus Poseidoniaceae archaeon

text: FRAM_WSC20 metagenomes

text: Candidatus Poseidoniaceae archaeon

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_30_1


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

text: Manually refined metagenome-assembled genome derived from a water column sample collected in the Fram Strait/West Spitsbergen region, specifically derived from ERS14356888,ERR10946522

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Sphingomonadales bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

text: uncultured Sphingomonadales bacterium

text: 16S rRNA gene and multi-gene marker approach

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_32_1

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Acidimicrobiales bacterium

text: FRAM_WSC20 metagenomes

characteristic: sample derived from

text: uncultured Acidimicrobiales bacterium

text: Multi-gene marker approach

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_34_1


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: Candidatus Poseidoniaceae archaeon

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

text: Candidatus Poseidoniaceae archaeon

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_36_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Luminiphilus sp.

text: FRAM_WSC20 metagenomes

text: uncultured Luminiphilus sp.

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_37_1

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Pseudomonadales bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

characteristic: sample derived from

text: uncultured Pseudomonadales bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_40_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Pseudomonadales bacterium

text: FRAM_WSC20 metagenomes

text: uncultured Pseudomonadales bacterium

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_46_1


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Pseudomonadales bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

text: uncultured Pseudomonadales bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_50_1

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Flavobacteriaceae bacterium

text: FRAM_WSC20 metagenomes

characteristic: sample derived from

text: uncultured Flavobacteriaceae bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_54_1


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: Candidatus Poseidoniaceae archaeon

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

text: Candidatus Poseidoniaceae archaeon

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_58_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: Candidatus Poseidoniaceae archaeon

text: FRAM_WSC20 metagenomes

text: Candidatus Poseidoniaceae archaeon

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_60_1

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Phycisphaerales bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

characteristic: sample derived from

text: uncultured Phycisphaerales bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_65_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Planktomarina sp.

text: FRAM_WSC20 metagenomes

text: uncultured Planktomarina sp.

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_68_1


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Rhodobacteraceae bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

text: uncultured Rhodobacteraceae bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_70_1

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: Manually refined metagenome-assembled genome derived from a water column sample collected in the Fram Strait/West Spitsbergen region, specifically derived from ERS14356888,ERR10946522

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured SAR86 cluster bacterium

text: FRAM_WSC20 metagenomes

characteristic: sample derived from

text: uncultured SAR86 cluster bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_72_1


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Amylibacter sp.

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

text: uncultured Amylibacter sp.

text: 16S rRNA gene and multi-gene marker approach

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_86_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Pseudomonadales bacterium

text: FRAM_WSC20 metagenomes

text: uncultured Pseudomonadales bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_90_1

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Pseudomonadales bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

characteristic: sample derived from

text: uncultured Pseudomonadales bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_92_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: Manually refined metagenome-assembled genome derived from a water column sample collected in the Fram Strait/West Spitsbergen region, specifically derived from ERS14356887,ERR10946523

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: Candidatus Poseidoniaceae archaeon

text: FRAM_WSC20 metagenomes

text: Candidatus Poseidoniaceae archaeon

text: Multi-gene marker approach

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_SRF_bin_101_1


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Amylibacter sp.

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

text: uncultured Amylibacter sp.

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_SRF_bin_115_1

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Aquiluna sp.

text: FRAM_WSC20 metagenomes

characteristic: sample derived from

text: uncultured Aquiluna sp.

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_SRF_bin_118_1


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Pontimonas sp.

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

text: uncultured Pontimonas sp.

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_SRF_bin_13_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: Candidatus Poseidoniaceae archaeon

text: FRAM_WSC20 metagenomes

text: Candidatus Poseidoniaceae archaeon

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_SRF_bin_132_1

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Flavobacteriales bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

characteristic: sample derived from

text: uncultured Flavobacteriales bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_SRF_bin_26_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Rhodobacteraceae bacterium

text: FRAM_WSC20 metagenomes

text: uncultured Rhodobacteraceae bacterium

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_SRF_bin_34_1


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Flavobacteriaceae bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

text: uncultured Flavobacteriaceae bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_SRF_bin_36_1

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Pseudomonadales bacterium

text: FRAM_WSC20 metagenomes

characteristic: sample derived from

text: uncultured Pseudomonadales bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_SRF_bin_45_1


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Flavobacteriaceae bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

text: uncultured Flavobacteriaceae bacterium

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_SRF_bin_49_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Flavobacteriales bacterium

text: FRAM_WSC20 metagenomes

text: uncultured Flavobacteriales bacterium

text: 16S rRNA gene and multi-gene marker approach

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_SRF_bin_51_1

characteristic: title


text: MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Halioglobus sp.

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

characteristic: sample derived from

text: uncultured Halioglobus sp.

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_SRF_bin_63_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Pseudomonadales bacterium

text: FRAM_WSC20 metagenomes

text: uncultured Pseudomonadales bacterium

text: Multi-gene marker approach

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_SRF_bin_65_1


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

text: Manually refined metagenome-assembled genome derived from a water column sample collected in the Fram Strait/West Spitsbergen region, specifically derived from ERS14356887,ERR10946523

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Pseudomonadales bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

text: uncultured Pseudomonadales bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_SRF_bin_66_1

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Polaribacter sp.

text: FRAM_WSC20 metagenomes

characteristic: sample derived from

text: uncultured Polaribacter sp.

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_SRF_bin_73_1


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Verrucomicrobiales bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

text: uncultured Verrucomicrobiales bacterium

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_SRF_bin_80_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Opitutaceae bacterium

text: FRAM_WSC20 metagenomes

text: uncultured Opitutaceae bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_SRF_bin_82_1

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Flavobacteriaceae bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

characteristic: sample derived from

text: uncultured Flavobacteriaceae bacterium

text: Multi-gene marker approach

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_SRF_bin_85_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Pseudomonadales bacterium

text: FRAM_WSC20 metagenomes

text: uncultured Pseudomonadales bacterium

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_SRF_bin_88_1


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

text: Manually refined metagenome-assembled genome derived from a water column sample collected in the Fram Strait/West Spitsbergen region, specifically derived from ERS14356890,ERR10946524

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: Sphingobium xenophagum

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

text: Sphingobium xenophagum

text: Multi-gene marker approach

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S25_BML_bin_106_1

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: Ralstonia pickettii

text: FRAM_WSC20 metagenomes

characteristic: sample derived from

text: Ralstonia pickettii

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S25_BML_bin_11_1


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: Pseudoalteromonas prydzensis

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

text: Pseudoalteromonas prydzensis

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S25_BML_bin_129_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: Sphingomonas ursincola

text: FRAM_WSC20 metagenomes

text: Sphingomonas ursincola

text: 16S rRNA gene and multi-gene marker approach

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S25_BML_bin_145_1

characteristic: title


text: MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: Candidatus Thalassarchaeaceae archaeon

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

characteristic: sample derived from

text: Candidatus Thalassarchaeaceae archaeon

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S25_BML_bin_150_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Flavobacteriaceae bacterium

text: FRAM_WSC20 metagenomes

text: uncultured Flavobacteriaceae bacterium

text: Multi-gene marker approach

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S25_BML_bin_152_1


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

text: Manually refined metagenome-assembled genome derived from a water column sample collected in the Fram Strait/West Spitsbergen region, specifically derived from ERS14356889,ERR10947144

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured OM182 clade bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

text: uncultured OM182 clade bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S25_SRF_bin_39_1

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Pseudomonadales bacterium

text: FRAM_WSC20 metagenomes

characteristic: sample derived from

text: uncultured Pseudomonadales bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S25_SRF_bin_4_1


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured SAR86 cluster bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

text: uncultured SAR86 cluster bacterium

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S25_SRF_bin_42_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured SAR86 cluster bacterium

text: FRAM_WSC20 metagenomes

text: uncultured SAR86 cluster bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S25_SRF_bin_49_1

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Flavobacteriaceae bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

characteristic: sample derived from

text: uncultured Flavobacteriaceae bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S25_SRF_bin_51_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Flavobacteriales bacterium

text: FRAM_WSC20 metagenomes

text: uncultured Flavobacteriales bacterium

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S25_SRF_bin_6_1


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Pseudomonadales bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

text: uncultured Pseudomonadales bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S25_SRF_bin_75_1

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: Manually refined metagenome-assembled genome derived from a water column sample collected in the Fram Strait/West Spitsbergen region, specifically derived from ERS14356892,ERR10947145

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: Candidatus Actinomarinales bacterium

text: FRAM_WSC20 metagenomes

characteristic: sample derived from

text: Candidatus Actinomarinales bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S26_BML_bin_12


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Rhodobacteraceae bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

text: uncultured Rhodobacteraceae bacterium

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S26_BML_bin_30_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: Candidatus Poseidoniaceae archaeon

text: FRAM_WSC20 metagenomes

text: Candidatus Poseidoniaceae archaeon

text: 16S rRNA gene and multi-gene marker approach

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S26_BML_bin_49_1

characteristic: title


text: MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Verrucomicrobiales bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

characteristic: sample derived from

text: uncultured Verrucomicrobiales bacterium

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S26_BML_bin_59_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Flavobacteriaceae bacterium

text: FRAM_WSC20 metagenomes

text: uncultured Flavobacteriaceae bacterium

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S26_BML_bin_6_1


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Flavobacteriaceae bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

text: uncultured Flavobacteriaceae bacterium

text: Multi-gene marker approach

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S26_BML_bin_61_1

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Verrucomicrobiales bacterium

text: FRAM_WSC20 metagenomes

characteristic: sample derived from

text: uncultured Verrucomicrobiales bacterium

text: Multi-gene marker approach

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S26_BML_bin_70_2


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: uncultured Pelagibacterales bacterium

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

text: uncultured Pelagibacterales bacterium

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S26_BML_bin_85_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Synechococcus sp.

text: FRAM_WSC20 metagenomes

text: uncultured Synechococcus sp.

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S26_BML_bin_9_1

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: assembly quality

text: Flye v2.9.1

characteristic: assembly software

text: Default settings

characteristic: binning parameters

text: Metabat2 v2.15

characteristic: binning software

text: marine pelagic biome [ENVO:01000023]

characteristic: completeness score

text: CheckM v1.2.0

characteristic: completeness software

characteristic: contamination score

text: Manually refined metagenome-assembled genome derived from a water column sample collected in the Fram Strait/West Spitsbergen region, specifically derived from ERS14356891,ERR10947766

characteristic: description

text: sea water [ENVO:00002149]

text: Svalbard

text: seawater

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: metagenomic source

text: Candidatus Poseidoniaceae archaeon

characteristic: organism

text: FRAM_WSC20 metagenomes

characteristic: project name

characteristic: sample derived from

text: Candidatus Poseidoniaceae archaeon

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S26_SRF_bin_100_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Flye v2.9.1

text: Default settings

text: Metabat2 v2.15

text: marine pelagic biome [ENVO:01000023]

characteristic: broad-scale environmental context

characteristic: collection date

text: CheckM v1.2.0

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Svalbard

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: seawater

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

text: uncultured Hyphomicrobiales bacterium

text: FRAM_WSC20 metagenomes

text: uncultured Hyphomicrobiales bacterium

text: Multi-gene marker approach

characteristic: taxonomic identity marker

text: Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S26_SRF_bin_38_1