characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: 76264:b69dfd53-e594-4e0e-96ba-e22ae4720652

characteristic: Submitter Id

text: laboratory environment [ENVO_01001405]

characteristic: broad-scale environmental context

text: GFBIO

characteristic: broker name

text: not collected

characteristic: collection date

characteristic: depth

text: PCR negative control (30 cycles)

text: laboratory environment [ENVO_01001405]

text: water

characteristic: environmental package

text: not collected

text: not collected

text: not collected

text: not collected

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: microbial community [PCO:1000004]

text: PowerWater

characteristic: nucleic acid extraction

text: seawater metagenome

characteristic: pcr primers

text: CACOON 2019

text: not collected

characteristic: sample collection device or method

text: PowerWater extraction

characteristic: sample material processing

text: PCR negative control (30 cycles)

text: seawater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to insdc

characteristic: target subfragment

text: water

characteristic: water environmental package


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 76263:b69dfd53-e594-4e0e-96ba-e22ae4720652

tag: Namespace:Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research

text: laboratory environment [ENVO_01001405]

text: GFBIO

text: not collected

unit: m

text: PCR negative control (25 cycles)

characteristic: description

text: laboratory environment [ENVO_01001405]

characteristic: environmental medium

text: water

text: not collected

characteristic: geographic location (country and/or sea)

text: not collected

unit: DD

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: not collected

text: mimarks-survey

text: microbial community [PCO:1000004]

characteristic: local environmental context

text: PowerWater

text: seawater metagenome

characteristic: organism

text: FWD:GTGYCAGCMGCCGCGGTAA REV:CCGYCAATTYMTTTRAGTTT; 515F-926R

text: CACOON 2019

characteristic: project name

text: not collected

text: PowerWater extraction

text: PCR negative control (25 cycles)

text: seawater metagenome

text: Illumina MiSeq

text: true

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research

text: public

text: 76262:b69dfd53-e594-4e0e-96ba-e22ae4720652

characteristic: Submitter Id

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

text: GFBIO

characteristic: broker name

characteristic: collection date

characteristic: depth

text: original seawater after transport

text: sea water [ENVO:00002149]

text: water

characteristic: environmental package

text: Arctic Ocean

text: Kara Sea

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: microbial community [PCO:1000004]

text: PowerWater

characteristic: nucleic acid extraction

text: seawater metagenome

characteristic: pcr primers

text: CACOON 2019

text: CTD rosette with Niskin bottles

characteristic: sample collection device or method

text: PowerWater extraction

characteristic: sample material processing

text: original seawater after transport

text: seawater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to insdc

characteristic: target subfragment

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 76261:b69dfd53-e594-4e0e-96ba-e22ae4720652

text: marine biome [ENVO:00000447]

text: GFBIO

text: original seawater after transport

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: water

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Kara Sea

text: mimarks-survey

text: microbial community [PCO:1000004]

characteristic: local environmental context

text: PowerWater

text: seawater metagenome

characteristic: organism

text: CACOON 2019

characteristic: project name

text: CTD rosette with Niskin bottles

text: PowerWater extraction

text: original seawater after transport

text: seawater metagenome

text: Illumina MiSeq

text: true

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: 76260:b69dfd53-e594-4e0e-96ba-e22ae4720652

characteristic: Submitter Id

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

text: GFBIO

characteristic: broker name

characteristic: collection date

characteristic: depth

text: original seawater after transport

text: sea water [ENVO:00002149]

text: water

characteristic: environmental package

text: Arctic Ocean

text: Kara Sea

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: microbial community [PCO:1000004]

text: PowerWater

characteristic: nucleic acid extraction

text: seawater metagenome

characteristic: pcr primers

text: CACOON 2019

text: CTD rosette with Niskin bottles

characteristic: sample collection device or method

text: PowerWater extraction

characteristic: sample material processing

text: original seawater after transport

text: seawater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to insdc

characteristic: target subfragment

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 76259:b69dfd53-e594-4e0e-96ba-e22ae4720652

text: marine biome [ENVO:00000447]

text: GFBIO

text: original seawater

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: water

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Kara Sea

text: mimarks-survey

text: microbial community [PCO:1000004]

characteristic: local environmental context

text: PowerWater

text: seawater metagenome

characteristic: organism

text: CACOON 2019

characteristic: project name

text: CTD rosette with Niskin bottles

text: PowerWater extraction

text: original seawater

text: seawater metagenome

text: Illumina MiSeq

text: true

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: 76258:b69dfd53-e594-4e0e-96ba-e22ae4720652

characteristic: Submitter Id

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

text: GFBIO

characteristic: broker name

characteristic: collection date

characteristic: depth

text: original seawater

text: sea water [ENVO:00002149]

text: water

characteristic: environmental package

text: Arctic Ocean

text: Kara Sea

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: microbial community [PCO:1000004]

text: PowerWater

characteristic: nucleic acid extraction

text: seawater metagenome

characteristic: pcr primers

text: CACOON 2019

text: CTD rosette with Niskin bottles

characteristic: sample collection device or method

text: PowerWater extraction

characteristic: sample material processing

text: original seawater

text: seawater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to insdc

characteristic: target subfragment

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 76257:b69dfd53-e594-4e0e-96ba-e22ae4720652

text: marine biome [ENVO:00000447]

text: GFBIO

text: original seawater

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: water

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Kara Sea

text: mimarks-survey

text: microbial community [PCO:1000004]

characteristic: local environmental context

text: PowerWater

text: seawater metagenome

characteristic: organism

text: CACOON 2019

characteristic: project name

text: CTD rosette with Niskin bottles

text: PowerWater extraction

text: original seawater

text: seawater metagenome

text: Illumina MiSeq

text: true

characteristic: title

text: water


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: 76256:b69dfd53-e594-4e0e-96ba-e22ae4720652

characteristic: Submitter Id

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

text: GFBIO

characteristic: broker name

characteristic: collection date

characteristic: depth

text: original seawater

text: sea water [ENVO:00002149]

text: water

characteristic: environmental package

text: Arctic Ocean

text: Kara Sea

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: microbial community [PCO:1000004]

text: PowerWater

characteristic: nucleic acid extraction

text: seawater metagenome

characteristic: pcr primers

text: CACOON 2019

text: CTD rosette with Niskin bottles

characteristic: sample collection device or method

text: PowerWater extraction

characteristic: sample material processing

text: original seawater

text: seawater metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to insdc

characteristic: target subfragment

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 76255:b69dfd53-e594-4e0e-96ba-e22ae4720652

text: terrestrial biome [ENVO:00000446]

text: GFBIO

text: original permafrost

characteristic: description

characteristic: elevation

text: permafrost [ENVO_00000134]

characteristic: environmental medium

text: soil

text: Russia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Lena Delta (Siberia)

text: mimarks-survey

text: microbial community [PCO:1000004]

characteristic: local environmental context

text: PowerSoil

text: seawater metagenome

characteristic: organism

text: CACOON 2019

characteristic: project name

text: Battery drill

text: PowerSoil tube

text: original permafrost

text: seawater metagenome

text: Illumina MiSeq

text: soil

characteristic: soil environmental package

text: true

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

tag: Namespace:Renji Hospital, Shanghai Jiao Tong University School of Medicine

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: human

characteristic: common name

text: Protocols: RNA samples were prepared from ARID3A knock-down and control K562 cells, eachwith three biological replicates. Total RNA was extracted and purified from K562 cells using RNAiso Reagent (9109, Takara, Japan) according to the manufacturer’s instructions. Total RNA (1 μg) was purified to remove rRNA and was used to generate the cDNA libraries using Illumina NEBNext® Ultra™ Directional RNA Library Prep Kit.

text: adult

characteristic: developmental stage

text: chronic myelogenous leukemia

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: organism part

text: Homo sapiens


text: Renji Hospital, Shanghai Jiao Tong University School of Medicine

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: human

characteristic: description

text: adult

text: chronic myelogenous leukemia

text: wild type genotype

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: Homo sapiens


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

tag: Namespace:Department of rheumatology Tokyo Medical and Dental University (TMDU)

unit: week

characteristic: age

text: ArrayExpress

text: house mouse

text: Protocols: Mouse-adapted SARS-CoV-2 strain was established in the previous study. Mice were anesthetized and then inoculated viral solution intranasally (i.n.). Viral solutions for inoculation were diluted with PBS and 30 µl of solution contained twice of the 50% lethal dose (2LD50) determined in 24-week-old BALB/c mice. At three post infection, mice were anesthetized by intraperitoneal injection with a mixture of 0.75 mg/kg of medetomidine, 4.0 mg/kg of midazolam, and 5.0 mg/kg of butorphanol. Lung samples were dissected from mice and immediately immersed in RNA later (Invitrogen) stabilization reagent and stored at -80℃ for 24 hr. Samples were transferred to a new tube containing 1-mm glass beads and 700μL Trizol (Invitrogen). Tissues were subsequently homogenized using a MINI BEAD-BEATER (Biospec). Total RNA was extracted and purified using a RNeasy mini kit (QIAGEN, Tokyo, Japan) and quantified using a spectrophotometer (NanoDrop one, Thermo Fisher Scientific). Total RNA was extracted from the lung as described above and checked for quality using RNA integrity scores were typically 7.0 and greater with an Agilent 2100 bioanalyzer (Agilent, Santa Clara, USA). For the quality control, mRNA had to meet the requirement of 28S/18S > 1, while miRNA had to meet the requirement of 28S/18S > 1.5. According to the manufacturer's protocol, the RNA was fragmented into small pieces. Afterward, the fragmented RNA was reverse-transcribed into cDNA and amplified with polymerase chain reaction (PCR) to create a cDNA library. Quality control and quantification of the libraries were performed with the Agilent 2100 bioanalyzer and real-time quantitative PCR (qPCR) (TaqMan Probe).

text: adult

text: leptin receptor deficient

text: Severe acute respiratory syndrome coronavirus 2

characteristic: infect

text: Mus musculus

characteristic: organism

text: Mus musculus

text: lung

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Department of rheumatology Tokyo Medical and Dental University (TMDU)

text: public

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: adult

characteristic: developmental stage

text: leptin receptor deficient

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: lung

text: Mus musculus

text: male


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: house mouse

text: adult

text: leptin receptor deficient

text: Mus musculus

text: Mus musculus

text: lung

characteristic: organism part

text: Mus musculus

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: age

text: ArrayExpress

text: house mouse

characteristic: description

text: adult

text: leptin deficient

characteristic: infect

text: Mus musculus

characteristic: organism

text: Mus musculus

text: lung

text: Mus musculus

text: male


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

text: adult

text: leptin deficient

text: Mus musculus

text: Mus musculus

text: lung

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

characteristic: title


text: WW0675/22 p-EL

characteristic: Contains RNA extracts (sample codes)

characteristic: Cq (N1)

characteristic: Cq (N2)

characteristic: DNA concentration (Qubit)

characteristic: Date of amplification (ARTIC)

characteristic: Date of sending/transfer to sequencing location

characteristic: Forward file name

text: National Institute of Biology

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: No. replicate

characteristic: Reverse file name

text: Department of Endocrinology, Diabetes and Metabolism, University Children's Hospital, University Medical Centre Ljubljana

characteristic: Sequenced where/how

text: INEXTVIR -20

characteristic: Storage location at NIB

tag: Namespace:National Institute of Biology

text: Sequenced wastewater sample from Central WWTP Ljubljana 1

text: wastewater treatment plant influent

characteristic: environment (biome)

text: wastewater treatment plant

characteristic: environment (feature)

text: wastewater treatment plant influent

characteristic: environment (material)

text: Slovenia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: virus

characteristic: investigation type

text: Sequencing of Slovenian WW samples for SARS-CoV-2 variant detection

characteristic: project name

text: Illumina

characteristic: sequencing method

text: wastewater/sludge

characteristic: wastewater/sludge environmental package


text: WW0675/22 p-EL

characteristic: Contains RNA extracts (sample codes)

characteristic: Cq (N1)

characteristic: Cq (N2)

characteristic: DNA concentration (Qubit)

characteristic: Date of amplification (ARTIC)

characteristic: Date of sending/transfer to sequencing location

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: Forward file name

text: National Institute of Biology

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: INEXTVIR -20

characteristic: Submitter Id

text: Sequenced wastewater sample from Central WWTP Ljubljana 2

characteristic: description

text: wastewater treatment plant influent

text: wastewater treatment plant

text: wastewater treatment plant influent

text: Slovenia

text: virus

characteristic: organism

text: Illumina

characteristic: title

text: wastewater/sludge


text: WW0679/22 p-EL

characteristic: Contains RNA extracts (sample codes)

characteristic: Cq (N1)

text: National Institute of Biology

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: No. replicate

characteristic: Reverse file name

characteristic: Sequenced where/how

text: INEXTVIR -20

characteristic: Storage location at NIB

text: Sequenced wastewater sample from Central WWTP Koper 1

text: wastewater treatment plant influent

characteristic: environment (biome)

text: wastewater treatment plant

characteristic: environment (feature)

text: wastewater treatment plant influent

characteristic: environment (material)

text: Slovenia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: virus

characteristic: investigation type

characteristic: project name

text: Illumina

characteristic: sequencing method

text: wastewater/sludge

characteristic: wastewater/sludge environmental package


text: WW0679/22 p-EL

characteristic: Contains RNA extracts (sample codes)

characteristic: Cq (N1)

characteristic: Cq (N2)

characteristic: DNA concentration (Qubit)

characteristic: Date of amplification (ARTIC)

characteristic: Date of sending/transfer to sequencing location

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: Forward file name

text: National Institute of Biology

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: INEXTVIR -20

characteristic: Submitter Id

text: Sequenced wastewater sample from Central WWTP Koper 2

characteristic: description

text: wastewater treatment plant influent

text: wastewater treatment plant

text: wastewater treatment plant influent

text: Slovenia

text: virus

characteristic: organism

text: Illumina

characteristic: title

text: wastewater/sludge


text: WW0683/22 p-EL

characteristic: Contains RNA extracts (sample codes)

characteristic: Cq (N1)

text: National Institute of Biology

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: No. replicate

characteristic: Reverse file name

characteristic: Sequenced where/how

text: INEXTVIR -20

characteristic: Storage location at NIB

text: Sequenced wastewater sample from Central WWTP Maribor 1

text: wastewater treatment plant influent

characteristic: environment (biome)

text: wastewater treatment plant

characteristic: environment (feature)

text: wastewater treatment plant influent

characteristic: environment (material)

text: Slovenia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: virus

characteristic: investigation type

characteristic: project name

text: Illumina

characteristic: sequencing method

text: wastewater/sludge

characteristic: wastewater/sludge environmental package


text: WW0683/22 p-EL

characteristic: Contains RNA extracts (sample codes)

characteristic: Cq (N1)

characteristic: Cq (N2)

characteristic: DNA concentration (Qubit)

characteristic: Date of amplification (ARTIC)

characteristic: Date of sending/transfer to sequencing location

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: Forward file name

text: National Institute of Biology

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: INEXTVIR -20

characteristic: Submitter Id

text: Sequenced wastewater sample from Central WWTP Maribor 2

characteristic: description

text: wastewater treatment plant influent

text: wastewater treatment plant

text: wastewater treatment plant influent

text: Slovenia

text: virus

characteristic: organism

text: Illumina

characteristic: title

text: wastewater/sludge


text: WW0799/22 p-EL

characteristic: Contains RNA extracts (sample codes)

characteristic: Cq (N1)

text: National Institute of Biology

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: No. replicate

characteristic: Reverse file name

characteristic: Sequenced where/how

text: INEXTVIR -20

characteristic: Storage location at NIB

text: wastewater treatment plant influent

characteristic: environment (biome)

text: wastewater treatment plant

characteristic: environment (feature)

text: wastewater treatment plant influent

characteristic: environment (material)

text: Slovenia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: virus

characteristic: investigation type

characteristic: project name

text: Illumina

characteristic: sequencing method

text: wastewater/sludge

characteristic: wastewater/sludge environmental package


text: WW0799/22 p-EL

characteristic: Contains RNA extracts (sample codes)

characteristic: Cq (N1)

characteristic: Cq (N2)

characteristic: DNA concentration (Qubit)

characteristic: Date of amplification (ARTIC)

characteristic: Date of sending/transfer to sequencing location

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: Forward file name

text: National Institute of Biology

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: INEXTVIR -20

characteristic: Submitter Id

characteristic: description

text: wastewater treatment plant influent

text: wastewater treatment plant

text: wastewater treatment plant influent

text: Slovenia

text: virus

characteristic: organism

text: Illumina

characteristic: title

text: wastewater/sludge


text: WW0795/22 p-EL

characteristic: Contains RNA extracts (sample codes)

characteristic: Cq (N1)

text: National Institute of Biology

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: No. replicate

characteristic: Reverse file name

characteristic: Sequenced where/how

text: INEXTVIR -20

characteristic: Storage location at NIB

text: wastewater treatment plant influent

characteristic: environment (biome)

text: wastewater treatment plant

characteristic: environment (feature)

text: wastewater treatment plant influent

characteristic: environment (material)

text: Slovenia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: virus

characteristic: investigation type

characteristic: project name

text: Illumina

characteristic: sequencing method

text: wastewater/sludge

characteristic: wastewater/sludge environmental package


text: WW0795/22 p-EL

characteristic: Contains RNA extracts (sample codes)

characteristic: Cq (N1)

characteristic: Cq (N2)

characteristic: DNA concentration (Qubit)

characteristic: Date of amplification (ARTIC)

characteristic: Date of sending/transfer to sequencing location

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: Forward file name

text: National Institute of Biology

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: INEXTVIR -20

characteristic: Submitter Id

characteristic: description

text: wastewater treatment plant influent

text: wastewater treatment plant

text: wastewater treatment plant influent

text: Slovenia

text: virus

characteristic: organism

text: Illumina

characteristic: title

text: wastewater/sludge


text: WW0791/22 p-EL

characteristic: Contains RNA extracts (sample codes)

characteristic: Cq (N1)

text: National Institute of Biology

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: No. replicate

characteristic: Reverse file name

characteristic: Sequenced where/how

text: INEXTVIR -20

characteristic: Storage location at NIB

text: wastewater treatment plant influent

characteristic: environment (biome)

text: wastewater treatment plant

characteristic: environment (feature)

text: wastewater treatment plant influent

characteristic: environment (material)

text: Slovenia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: virus

characteristic: investigation type

characteristic: project name

text: Illumina

characteristic: sequencing method

text: wastewater/sludge

characteristic: wastewater/sludge environmental package


text: WW0791/22 p-EL

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E-MTAB-12623:lean ob_1

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characteristic: strain

text: lean ob_1


E-MTAB-12623:lean ob_2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-12623:lean ob_2

text: ArrayExpress

text: house mouse

characteristic: common name

text: adult

text: leptin deficient

text: Mus musculus

text: Mus musculus

text: lung

text: lean

text: Mus musculus

text: male

text: lean ob_2

characteristic: title


E-MTAB-12623:lean ob_3

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12623:lean ob_3

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

text: adult

text: leptin deficient

text: Mus musculus

text: Mus musculus

text: lung

text: lean

text: Mus musculus

text: male

text: lean ob_3


E-MTAB-12623:obese ob_1

text: public

text: E-MTAB-12623:obese ob_1

text: ArrayExpress

text: house mouse

characteristic: description

text: adult

characteristic: developmental stage

text: leptin deficient

characteristic: genotype

characteristic: infect

text: Mus musculus

characteristic: organism

text: Mus musculus

text: lung

characteristic: organism part

text: obese

characteristic: phenotype

text: Mus musculus

text: male

text: continuous leptin treatment

characteristic: stimulus

text: obese ob_1


E-MTAB-12623:obese ob_2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-12623:obese ob_2

text: ArrayExpress

text: house mouse

characteristic: common name

text: adult

text: leptin deficient

text: Mus musculus

text: Mus musculus

text: lung

text: obese

text: Mus musculus

text: male

characteristic: sex

text: continuous leptin treatment

characteristic: strain

text: obese ob_2


E-MTAB-12623:obese ob_3

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12623:obese ob_3

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

text: adult

text: leptin deficient

text: Mus musculus

text: Mus musculus

text: lung

text: obese

text: Mus musculus

text: male

text: continuous leptin treatment

text: obese ob_3

characteristic: title


E-MTAB-12644:NAD+ resistent clone 1

text: public

text: E-MTAB-12644:NAD+ resistent clone 1

tag: Namespace:Center for synthetic microbiology SYNMIKRO Philipps University Marburg

text: ArrayExpress

text: Protocols: Streptococcus pneumoniae was cultivated in liquid medium with increasing concentrations (50 µM to 5 mM) of NAD+. After six passages, bacteria were plated on blood agar supplemented with 500 µM NAD+ and three clones were picked Total DNA for resequencing was extracted using a DNeasy Blood and Tissue kit (Qiagen) according to the manual. DNA libraries for sequencing were generated by applying a Nextera XT DNA Library Preparation kit (Illumina)

characteristic: description

text: spontaneus NAD+ resistent clone

characteristic: genotype

text: not applicable

characteristic: isolate

text: Streptococcus pneumoniae

characteristic: organism

text: Streptococcus pneumoniae

text: whole organism

characteristic: organism part

text: Streptococcus pneumoniae

text: NAD+ resistent clone 1


E-MTAB-12644:NAD+ resistent clone 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Center for synthetic microbiology SYNMIKRO Philipps University Marburg

characteristic: INSDC center name

text: public

text: E-MTAB-12644:NAD+ resistent clone 2

text: ArrayExpress

text: spontaneus NAD+ resistent clone

text: not applicable

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: whole organism

text: Streptococcus pneumoniae

text: NAD+ resistent clone 2


E-MTAB-12644:NAD+ resistent clone 3

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-12644:NAD+ resistent clone 3

text: ArrayExpress

text: spontaneus NAD+ resistent clone

text: not applicable

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: whole organism

text: Streptococcus pneumoniae

characteristic: strain

text: NAD+ resistent clone 3


text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: wild type genotype

text: not applicable

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: whole organism

text: Streptococcus pneumoniae

text: WT


E-MTAB-12644:WT P6

text: public

text: E-MTAB-12644:WT P6

text: ArrayExpress

characteristic: broker name

text: wild type genotype

text: not applicable

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: whole organism

text: Streptococcus pneumoniae

text: WT P6

characteristic: title


text: public

tag: Namespace:Centro de Investigaciones en Ciencias de la Tierra (CICTERRA-CONICET-UNC)

text: Terrestrial ecosystem

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: soil sample

characteristic: description

characteristic: elevation

text: grasees, rock, litter

characteristic: environmental medium

text: Argentina

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Shrubland

characteristic: local environmental context

text: soil metagenome

text: Short-term response of soil microbial communities associated to different native vegetation type to wildfire

characteristic: project name

text: soil metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Centro de Investigaciones en Ciencias de la Tierra (CICTERRA-CONICET-UNC)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Terrestrial ecosystem

text: soil sample

text: trees, leaf litter, rocks

text: Argentina

text: soil metagenome

characteristic: organism

text: soil metagenome


text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Terrestrial ecosystem

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: soil sample

text: thin tussock grasslands, annual plants

text: Argentina

text: soil metagenome

text: soil metagenome

characteristic: title


text: public

text: Terrestrial ecosystem

text: soil sample

characteristic: description

characteristic: elevation

text: grasees, rock, litter

characteristic: environmental medium

text: Argentina

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Shrubland

characteristic: local environmental context

text: soil metagenome

text: soil metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Terrestrial ecosystem

text: soil sample

text: thin tussock grasslands

text: Argentina

text: soil metagenome

characteristic: project name

text: soil metagenome


text: UPPSALA UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UPPSALA UNIVERSITY

characteristic: Submitter Id

text: human

characteristic: common name

text: Romania Early Neolithic

text: Homo sapiens

characteristic: organism

text: Homo sapiens


text: UPPSALA UNIVERSITY

text: public

text: human

text: Romania Late Neolithic/Eneolithic

characteristic: description

text: Homo sapiens

text: Homo sapiens

characteristic: title


text: UPPSALA UNIVERSITY

text: public

text: human

text: Poland Neolithic

text: Homo sapiens

text: Homo sapiens


text: UPPSALA UNIVERSITY

text: public

text: human

text: Poland Eneolithic

text: Homo sapiens

text: Homo sapiens


text: UPPSALA UNIVERSITY

text: public

text: human

text: Poland Mesolithic

text: Homo sapiens

text: Homo sapiens


text: UPPSALA UNIVERSITY

text: public

text: human

text: Romania Mesolithic

text: Homo sapiens

text: Homo sapiens


text: UPPSALA UNIVERSITY

text: public

text: human

text: Ukraine Neolithic

text: Homo sapiens

text: Homo sapiens


text: UPPSALA UNIVERSITY

text: public

text: human

text: Ukraine Mesolithic

text: Homo sapiens

text: Homo sapiens


text: UPPSALA UNIVERSITY

text: public

text: human

text: Ukraine Eneolithic

text: Homo sapiens

text: Homo sapiens


text: UPPSALA UNIVERSITY

text: public

text: human

text: Ukraine Epipaleolithic/Mesolithic

text: Homo sapiens

text: Homo sapiens


text: public

tag: Namespace:Instituto Nacional de Enfermedades Infecciosas (INEI) - ANLIS - Dr. Carlos G. Malbran

characteristic: collection date

text: N. gonorrhoeae urethral

text: Argentina

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: isolate

text: Urethral

text: not provided

text: Neisseria gonorrhoeae

text: Neisseria gonorrhoeae

text: not provided

characteristic: serovar

text: not provided

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Instituto Nacional de Enfermedades Infecciosas (INEI) - ANLIS - Dr. Carlos G. Malbran

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: N. gonorrhoeae urethral

text: Argentina

text: diseased

text: Homo Sapiens

text: not provided

text: Urethral

text: not provided

text: Neisseria gonorrhoeae

text: Neisseria gonorrhoeae

text: not provided

text: not provided


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: N. gonorrhoeae urine

text: Argentina

text: diseased

text: Homo Sapiens

text: not provided

text: Urine

text: not provided

text: Neisseria gonorrhoeae

text: Neisseria gonorrhoeae

text: not provided

text: not provided


text: public

characteristic: collection date

text: N. gonorrhoeae semen

characteristic: description

text: Argentina

text: diseased

text: Homo Sapiens

text: not provided

text: Semen

text: not provided

text: Neisseria gonorrhoeae

characteristic: organism

text: Neisseria gonorrhoeae

text: not provided

text: not provided

characteristic: title


text: public

text: N. gonorrhoeae perianal abscess

text: Argentina

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: isolate

text: Perianal abscess

text: not provided

text: Neisseria gonorrhoeae

text: Neisseria gonorrhoeae

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

tag: Namespace:Charite-Universitaetsmedizin Berlin, corporate member of Freie Universitaet Berlin, Humboldt Universitaet zu Berlin, Berlin, Germany.

text: INSPI

characteristic: collecting institution

text: INSPI

characteristic: collector name

text: respiratory sample

text: Ecuador

text: human

characteristic: host common name

text: restricted access

text: �Homo sapiens

text: restricted access

characteristic: host sex

characteristic: host subject id

text: Severe acute respiratory syndrome coronavirus 2


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Charite-Universitaetsmedizin Berlin, corporate member of Freie Universitaet Berlin, Humboldt Universitaet zu Berlin, Berlin, Germany.

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: INSPI

text: INSPI

text: respiratory sample

text: Ecuador

text: human

text: restricted access

text: �Homo sapiens

text: restricted access


text: Rowett Institute

text: public

tag: Namespace:Rowett Institute

characteristic: Submitter Id

text: sampled at home into a specimen container

characteristic: broad-scale environmental context

characteristic: collection date

text: human

characteristic: common name

text: human faecal

characteristic: description

text: air

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Homo sapiens

characteristic: organism

text: PRECISE Study

characteristic: project name

text: Homo sapiens

text: PRECISE Study Baseline

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Rowett Institute

characteristic: INSDC center name

text: public

text: human

text: PCR control

text: air

text: United Kingdom

text: Homo sapiens

text: PRECISE Study

text: Homo sapiens

text: PRECISE Study Baseline


text: Addis Ababa University

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Addis Ababa University

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: megahit

characteristic: assembly software

text: -m 1500

characteristic: binning parameters

characteristic: binning software

text: not provided

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: This sample represents a MAG derived from the metagenomic sample ERS14251739

text: Ethiopia

text: not provided

text: not provided

text: metagenome

text: Gallus gallus

characteristic: local environmental context

text: Gallus gallus

characteristic: metagenomic source

text: Thomasclavelia spiroformis

characteristic: sample derived from

text: Thomasclavelia spiroformis

text: Novaseq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Addis Ababa University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: idba-ud

text: --minContigLength 2000, --minContigDepth 2

characteristic: broad-scale environmental context

text: not provided

text: checkm

text: This sample represents a MAG derived from the metagenomic sample ERS14251598

characteristic: description

characteristic: environmental medium

text: Ethiopia

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome

text: Gallus gallus

text: Gallus gallus

text: Aeriscardovia aeriphila

characteristic: organism

characteristic: project name

text: Aeriscardovia aeriphila

text: Novaseq 6000

text: multi-marker approach

characteristic: title


text: Addis Ababa University

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: idba-ud

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

text: not provided

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: This sample represents a MAG derived from the metagenomic sample ERS14251721

text: Ethiopia

text: not provided

text: not provided

text: metagenome

text: Gallus gallus

characteristic: local environmental context

text: Gallus gallus

characteristic: metagenomic source

text: uncultured Akkermansia sp.

characteristic: sample derived from

text: uncultured Akkermansia sp.

text: Novaseq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Addis Ababa University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: megahit

text: -m 1500

characteristic: broad-scale environmental context

text: not provided

text: checkm

text: This sample represents a MAG derived from the metagenomic sample ERS14251695,ERS14251696,ERS14251704,ERS14251713,ERS14251732,ERS14251742,ERS14251744,ERS14251745,ERS14251746,ERS14251826,ERS14251827,ERS14251828,ERS14251829,ERS14251831,ERS14251646,ERS14251648,ERS14251649,ERS14251650,ERS14251651,ERS14251652,ERS14251653,ERS14251654,ERS14251692,ERS14251598,ERS14251599,ERS14251600,ERS14251601,ERS14251602,ERS14251603,ERS14251604,ERS14251605,ERS14251693,ERS14251694,ERS14251734,ERS14251735,ERS14251736,ERS14251737,ERS14251738,ERS14251739,ERS14251740,ERS14251741,ERS14251743,ERS14251824,ERS14251825,ERS14251830,ERS14251832,ERS14251833,ERS14251834,ERS14251835

characteristic: description

characteristic: environmental medium

text: Ethiopia

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome

text: Gallus gallus

text: Gallus gallus

text: uncultured Akkermansia sp.

characteristic: organism

characteristic: project name

text: uncultured Akkermansia sp.

text: Novaseq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: Addis Ababa University

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: idba-ud

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

text: not provided

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: This sample represents a MAG derived from the metagenomic sample ERS14251797

text: Ethiopia

text: not provided

text: not provided

text: metagenome

text: Gallus gallus

characteristic: local environmental context

text: Gallus gallus

characteristic: metagenomic source

text: uncultured Akkermansia sp.

characteristic: sample derived from

text: uncultured Akkermansia sp.

text: Novaseq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Addis Ababa University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: idba-ud

characteristic: broad-scale environmental context

text: not provided

text: checkm

text: This sample represents a MAG derived from the metagenomic sample ERS14251831

characteristic: description

characteristic: environmental medium

text: Ethiopia

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome

text: Gallus gallus

text: Gallus gallus

text: uncultured Akkermansia sp.

characteristic: organism

characteristic: project name

text: uncultured Akkermansia sp.

text: Novaseq 6000

characteristic: sequencing method

text: multi-marker approach


text: Addis Ababa University

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: idba-ud

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

text: not provided

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: This sample represents a MAG derived from the metagenomic sample ERS14251596

text: Ethiopia

text: not provided

text: not provided

text: metagenome

text: Gallus gallus

characteristic: local environmental context

text: Gallus gallus

characteristic: metagenomic source

text: uncultured Alistipes sp.

characteristic: sample derived from

text: uncultured Alistipes sp.

text: Novaseq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Addis Ababa University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: idba-ud

characteristic: broad-scale environmental context

text: not provided

text: checkm

text: This sample represents a MAG derived from the metagenomic sample ERS14251611

characteristic: description

characteristic: environmental medium

text: Ethiopia

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome

text: Gallus gallus

text: Gallus gallus

text: uncultured Alistipes sp.

characteristic: organism

characteristic: project name

text: uncultured Alistipes sp.

text: Novaseq 6000

text: multi-marker approach

characteristic: title


text: Addis Ababa University

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: idba-ud

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

text: not provided

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: This sample represents a MAG derived from the metagenomic sample ERS14251630

text: Ethiopia

text: not provided

text: not provided

text: metagenome

text: Gallus gallus

characteristic: local environmental context

text: Gallus gallus

characteristic: metagenomic source

text: uncultured Alistipes sp.

characteristic: sample derived from

text: uncultured Alistipes sp.

text: Novaseq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Addis Ababa University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: idba-ud

characteristic: broad-scale environmental context

text: not provided

text: checkm

text: This sample represents a MAG derived from the metagenomic sample ERS14251691

characteristic: description

characteristic: environmental medium

text: Ethiopia

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome

text: Gallus gallus

text: Gallus gallus

text: uncultured Alistipes sp.

characteristic: organism

characteristic: project name

text: uncultured Alistipes sp.

text: Novaseq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: Addis Ababa University

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: idba-ud

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

text: not provided

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: This sample represents a MAG derived from the metagenomic sample ERS14251695

text: Ethiopia

text: not provided

text: not provided

text: metagenome

text: Gallus gallus

characteristic: local environmental context

text: Gallus gallus

characteristic: metagenomic source

text: uncultured Alistipes sp.

characteristic: sample derived from

text: uncultured Alistipes sp.

text: Novaseq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Addis Ababa University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: idba-ud

characteristic: broad-scale environmental context

text: not provided

text: checkm

text: This sample represents a MAG derived from the metagenomic sample ERS14251704

characteristic: description

characteristic: environmental medium

text: Ethiopia

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome

text: Gallus gallus

text: Gallus gallus

text: uncultured Alistipes sp.

characteristic: organism

characteristic: project name

text: uncultured Alistipes sp.

text: Novaseq 6000

characteristic: sequencing method

text: multi-marker approach


text: Addis Ababa University

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: idba-ud

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

text: not provided

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: This sample represents a MAG derived from the metagenomic sample ERS14251741

text: Ethiopia

text: not provided

text: not provided

text: metagenome

text: Gallus gallus

characteristic: local environmental context

text: Gallus gallus

characteristic: metagenomic source

text: uncultured Alistipes sp.

characteristic: sample derived from

text: uncultured Alistipes sp.

text: Novaseq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Addis Ababa University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: megahit

characteristic: broad-scale environmental context

text: not provided

text: checkm

text: This sample represents a MAG derived from the metagenomic sample ERS14251726,ERS14251727,ERS14251728,ERS14251729,ERS14251730,ERS14251731,ERS14251732,ERS14251733,ERS14251734,ERS14251735,ERS14251736,ERS14251737,ERS14251738,ERS14251739,ERS14251740,ERS14251741,ERS14251742,ERS14251743,ERS14251744,ERS14251745,ERS14251746,ERS14251747,ERS14251748,ERS14251749,ERS14251750,ERS14251751,ERS14251752,ERS14251753,ERS14251754,ERS14251755,ERS14251755,ERS14251756,ERS14251757,ERS14251758,ERS14251759,ERS14251760,ERS14251761,ERS14251762,ERS14251763,ERS14251764,ERS14251765,ERS14251766,ERS14251767,ERS14251769,ERS14251769,ERS14251770,ERS14251771,ERS14251772

characteristic: description

characteristic: environmental medium

text: Ethiopia

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome

text: Gallus gallus

text: Gallus gallus

text: uncultured Alistipes sp.

characteristic: organism

characteristic: project name

text: uncultured Alistipes sp.

text: Novaseq 6000

text: multi-marker approach

characteristic: title


text: Addis Ababa University

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: megahit

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

text: not provided

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Ethiopia

text: not provided

text: not provided

text: metagenome

text: Gallus gallus

characteristic: local environmental context

text: Gallus gallus

characteristic: metagenomic source

text: uncultured Alistipes sp.

text: ERS14251726,ERS14251727,ERS14251728,ERS14251729,ERS14251730,ERS14251731,ERS14251732,ERS14251733,ERS14251734,ERS14251735,ERS14251736,ERS14251737,ERS14251738,ERS14251739,ERS14251740,ERS14251741,ERS14251742,ERS14251743,ERS14251744,ERS14251745,ERS14251746,ERS14251747,ERS14251748,ERS14251749,ERS14251750,ERS14251751,ERS14251752,ERS14251753,ERS14251754,ERS14251755,ERS14251755,ERS14251756,ERS14251757,ERS14251758,ERS14251759,ERS14251760,ERS14251761,ERS14251762,ERS14251763,ERS14251764,ERS14251765,ERS14251766,ERS14251767,ERS14251769,ERS14251769,ERS14251770,ERS14251771,ERS14251772

characteristic: sample derived from

text: uncultured Alistipes sp.

text: Novaseq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Addis Ababa University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: megahit

characteristic: broad-scale environmental context

text: not provided

text: checkm

text: This sample represents a MAG derived from the metagenomic sample ERS14251768,ERS14251773,ERS14251774,ERS14251775,ERS14251776,ERS14251777,ERS14251778,ERS14251779,ERS14251780,ERS14251781,ERS14251782,ERS14251783,ERS14251784,ERS14251785,ERS14251786,ERS14251787,ERS14251788,ERS14251789,ERS14251790,ERS14251790,ERS14251791,ERS14251792,ERS14251793,ERS14251794,ERS14251795,ERS14251796,ERS14251797,ERS14251798,ERS14251799,ERS14251799,ERS14251800,ERS14251801,ERS14251802,ERS14251803,ERS14251804,ERS14251805,ERS14251806,ERS14251806,ERS14251807,ERS14251807,ERS14251807,ERS14301344,ERS14251808,ERS14251809,ERS14251809,ERS14251810,ERS14251811,ERS14251812

characteristic: description

characteristic: environmental medium

text: Ethiopia

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome

text: Gallus gallus

text: Gallus gallus

text: uncultured Alistipes sp.

characteristic: organism

characteristic: project name

text: uncultured Alistipes sp.

text: Novaseq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: Addis Ababa University

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: megahit

characteristic: assembly software

text: -m 1500

characteristic: binning parameters

characteristic: binning software

text: not provided

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: This sample represents a MAG derived from the metagenomic sample ERS14251663,ERS14251664,ERS14251666,ERS14251667,ERS14251668,ERS14251669,ERS14251670,ERS14251671,ERS14251672,ERS14251673,ERS14251777,ERS14251778,ERS14251779,ERS14251780,ERS14251781,ERS14251783,ERS14251784,ERS14251785,ERS14251786,ERS14251787,ERS14251788,ERS14251789,ERS14251790,ERS14251792,ERS14251655,ERS14251657,ERS14251658,ERS14251659,ERS14251660,ERS14251661,ERS14251662

text: Ethiopia

text: not provided

text: not provided

text: metagenome

text: Gallus gallus

characteristic: local environmental context

text: Gallus gallus

characteristic: metagenomic source

text: uncultured Alistipes sp.

characteristic: sample derived from

text: uncultured Alistipes sp.

text: Novaseq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Addis Ababa University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: megahit

text: -m 1500

characteristic: broad-scale environmental context

text: not provided

text: checkm

text: This sample represents a MAG derived from the metagenomic sample ERS14251697,ERS14251698,ERS14251699,ERS14251700,ERS14251701,ERS14251702,ERS14251703,ERS14251705,ERS14251613,ERS14251614,ERS14251616,ERS14251617,ERS14251618,ERS14251619,ERS14251620,ERS14251621,ERS14251622,ERS14251623,ERS14251596,ERS14251615,ERS14251624,ERS14251626,ERS14251636,ERS14251647,ERS14251656,ERS14251665,ERS14251682,ERS14251683,ERS14251684,ERS14251686,ERS14251687,ERS14251688,ERS14251689,ERS14251690,ERS14251691,ERS14251801,ERS14251802,ERS14251803,ERS14251804,ERS14251805,ERS14251806,ERS14251807,ERS14251793,ERS14251794,ERS14251795,ERS14251796,ERS14251797,ERS14251798,ERS14251799,ERS14251674,ERS14251675,ERS14251676,ERS14251677,ERS14251678,ERS14251679,ERS14251680,ERS14251681

characteristic: description

characteristic: environmental medium

text: Ethiopia

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome

text: Gallus gallus

text: Gallus gallus

text: uncultured Alistipes sp.

characteristic: organism

characteristic: project name

text: uncultured Alistipes sp.

text: Novaseq 6000

characteristic: sequencing method

text: multi-marker approach


text: Addis Ababa University

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: megahit

characteristic: assembly software

text: -m 1500

characteristic: binning parameters

characteristic: binning software

text: not provided

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Ethiopia

text: not provided

text: not provided

text: metagenome

text: Gallus gallus

characteristic: local environmental context

text: Gallus gallus

characteristic: metagenomic source

text: uncultured Alistipes sp.

text: ERS14251663,ERS14251664,ERS14251666,ERS14251667,ERS14251668,ERS14251669,ERS14251670,ERS14251671,ERS14251672,ERS14251673,ERS14251777,ERS14251778,ERS14251779,ERS14251780,ERS14251781,ERS14251783,ERS14251784,ERS14251785,ERS14251786,ERS14251787,ERS14251788,ERS14251789,ERS14251790,ERS14251792,ERS14251655,ERS14251657,ERS14251658,ERS14251659,ERS14251660,ERS14251661,ERS14251662

characteristic: sample derived from

text: uncultured Alistipes sp.

text: Novaseq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Addis Ababa University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: megahit

text: -m 1500

characteristic: broad-scale environmental context

text: not provided

text: checkm

text: This sample represents a MAG derived from the metagenomic sample ERS14251695,ERS14251696,ERS14251704,ERS14251713,ERS14251732,ERS14251742,ERS14251744,ERS14251745,ERS14251746,ERS14251826,ERS14251827,ERS14251828,ERS14251829,ERS14251831,ERS14251646,ERS14251648,ERS14251649,ERS14251650,ERS14251651,ERS14251652,ERS14251653,ERS14251654,ERS14251692,ERS14251598,ERS14251599,ERS14251600,ERS14251601,ERS14251602,ERS14251603,ERS14251604,ERS14251605,ERS14251693,ERS14251694,ERS14251734,ERS14251735,ERS14251736,ERS14251737,ERS14251738,ERS14251739,ERS14251740,ERS14251741,ERS14251743,ERS14251824,ERS14251825,ERS14251830,ERS14251832,ERS14251833,ERS14251834,ERS14251835

characteristic: description

characteristic: environmental medium

text: Ethiopia

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome

text: Gallus gallus

text: Gallus gallus

text: uncultured Alistipes sp.

characteristic: organism

characteristic: project name

text: uncultured Alistipes sp.

text: Novaseq 6000

text: multi-marker approach

characteristic: title


text: Addis Ababa University

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: megahit

characteristic: assembly software

text: -m 1500

characteristic: binning parameters

characteristic: binning software

text: not provided

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: This sample represents a MAG derived from the metagenomic sample ERS14251762,ERS14251763,ERS14251764,ERS14251765,ERS14251766,ERS14251767,ERS14251769,ERS14251770,ERS14251771,ERS14251772,ERS14251773,ERS14251774,ERS14251776,ERS14251715,ERS14251716,ERS14251717,ERS14251718,ERS14251719,ERS14251720,ERS14251721,ERS14251722,ERS14251723,ERS14251706,ERS14251707,ERS14251708,ERS14251709,ERS14251710,ERS14251711,ERS14251712,ERS14251714,ERS14251597,ERS14251606,ERS14251607,ERS14251608,ERS14251609,ERS14251610,ERS14251611,ERS14251612,ERS14251685

text: Ethiopia

text: not provided

text: not provided

text: metagenome

text: Gallus gallus

characteristic: local environmental context

text: Gallus gallus

characteristic: metagenomic source

text: uncultured Alistipes sp.

characteristic: sample derived from

text: uncultured Alistipes sp.

text: Novaseq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Addis Ababa University

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: megahit

text: -m 1500

characteristic: broad-scale environmental context

text: not provided

text: checkm

text: This sample represents a MAG derived from the metagenomic sample ERS14251625,ERS14251627,ERS14251628,ERS14251629,ERS14251630,ERS14251631,ERS14251632,ERS14251633,ERS14251634,ERS14251747,ERS14251768,ERS14251775,ERS14251782,ERS14251791,ERS14251800,ERS14251813,ERS14251635,ERS14251637,ERS14251638,ERS14251639,ERS14251640,ERS14251641,ERS14251642,ERS14251643,ERS14251644,ERS14251645,ERS14251724,ERS14251725,ERS14251726,ERS14251727,ERS14251728,ERS14251729,ERS14251730,ERS14251731,ERS14251733,ERS14251748,ERS14251749,ERS14251750,ERS14251751,ERS14251752,ERS14251753,ERS14251754,ERS14251808,ERS14251809,ERS14251810,ERS14251811,ERS14251812,ERS14251814,ERS14251815,ERS14251816,ERS14251817,ERS14251818,ERS14251819,ERS14251820,ERS14251821,ERS14251822,ERS14251823,ERS14251755,ERS14251756,ERS14251757,ERS14251758,ERS14251759,ERS14251760,ERS14251761

characteristic: description

characteristic: environmental medium

text: Ethiopia

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome

text: Gallus gallus

text: Gallus gallus

text: uncultured Alistipes sp.

characteristic: organism

characteristic: project name

text: uncultured Alistipes sp.

text: Novaseq 6000

text: multi-marker approach

characteristic: taxonomic identity marker