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characteristic: pregnancy

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characteristic: project name

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text: DNA/RNA-shield (Zymo Research)

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text: no

characteristic: antibiotics past 3 months

text: combined oral contraceptive

characteristic: birth control

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text: never

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

unit: year

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text: no

text: MiMens

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unit: °C

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characteristic: ENA-CHECKLIST

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characteristic: project name

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characteristic: ENA-CHECKLIST

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characteristic: ENA-CHECKLIST

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characteristic: ENA-CHECKLIST

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characteristic: host body-mass index

text: mid fornix

text: tampon, pad, cup

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text: no

text: MiMens

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characteristic: ENA-CHECKLIST

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text: no

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text: never

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text: mid fornix

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text: no

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characteristic: ENA-CHECKLIST

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text: no

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characteristic: project name

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text: '-20 / -80

characteristic: sample storage temperature

text: vaginal metagenome

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characteristic: sequencing method

text: never

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characteristic: ENA-CHECKLIST

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characteristic: host body-mass index

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text: tampon, pad

characteristic: menstrual hygiene product

text: vaginal metagenome

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text: no

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text: FLOQSwab (COPAN diagnostics)

text: Swab

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text: MGISeq PE150

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characteristic: ENA-CHECKLIST

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characteristic: host body site

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text: no

characteristic: pregnancy

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characteristic: project name

text: FLOQSwab (COPAN diagnostics)

characteristic: sample collection device

text: Swab

characteristic: sample collection method

text: DNA/RNA-shield (Zymo Research)

characteristic: sample storage medium

text: '-20 / -80

characteristic: sample storage temperature

text: vaginal metagenome

text: MGISeq PE150

characteristic: sequencing method

text: never

characteristic: smoking status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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text: public

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text: no

characteristic: antibiotics past 3 months

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text: never

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characteristic: environmental medium

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text: vaginal mucus

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text: mid fornix

text: pad, cup

characteristic: menstrual hygiene product

text: vaginal metagenome

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text: no

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text: FLOQSwab (COPAN diagnostics)

text: Swab

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text: MGISeq PE150

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characteristic: ENA-CHECKLIST

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characteristic: External Id

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text: no

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characteristic: project name

text: FLOQSwab (COPAN diagnostics)

characteristic: sample collection device

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text: DNA/RNA-shield (Zymo Research)

characteristic: sample storage medium

text: '-20 / -80

characteristic: sample storage temperature

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characteristic: sequencing method

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text: no

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text: never

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characteristic: host body-mass index

text: mid fornix

text: tampon, pad

characteristic: menstrual hygiene product

text: vaginal metagenome

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text: no

text: MiMens

text: FLOQSwab (COPAN diagnostics)

text: Swab

text: DNA/RNA-shield (Zymo Research)

text: '-20 / -80

text: vaginal metagenome

text: MGISeq PE150

text: never


characteristic: ENA-CHECKLIST

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characteristic: External Id

characteristic: INSDC center name

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text: vaginal metagenome

text: no

characteristic: pregnancy

text: MiMens

characteristic: project name

text: FLOQSwab (COPAN diagnostics)

characteristic: sample collection device

text: Swab

characteristic: sample collection method

text: DNA/RNA-shield (Zymo Research)

characteristic: sample storage medium

text: '-20 / -80

characteristic: sample storage temperature

text: vaginal metagenome

text: MGISeq PE150

characteristic: sequencing method

text: never

characteristic: smoking status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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text: no

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text: levonorgestrel intra-uterine system

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characteristic: broad-scale environmental context

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text: never

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characteristic: drinking habits

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characteristic: environmental medium

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characteristic: geographic location (latitude)

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text: no

text: MiMens

text: FLOQSwab (COPAN diagnostics)

text: Swab

text: DNA/RNA-shield (Zymo Research)

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text: vaginal metagenome

text: MGISeq PE150

text: never


characteristic: ENA-CHECKLIST

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characteristic: External Id

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text: no

characteristic: pregnancy

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characteristic: project name

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characteristic: sample collection device

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characteristic: sample collection method

text: DNA/RNA-shield (Zymo Research)

characteristic: sample storage medium

text: '-20 / -80

characteristic: sample storage temperature

text: vaginal metagenome

text: MGISeq PE150

characteristic: sequencing method

text: never

characteristic: smoking status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

characteristic: INSDC center name

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text: public

characteristic: SRA accession

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text: no

characteristic: antibiotics past 3 months

text: levonorgestrel intra-uterine system

characteristic: birth control

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characteristic: broad-scale environmental context

characteristic: collection date

text: never

characteristic: douche

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characteristic: drinking habits

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characteristic: environmental medium

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vaginal mucus

text: vagina

text: mid fornix

text: tampon, pad

text: vaginal metagenome

characteristic: organism

text: no

text: MiMens

text: FLOQSwab (COPAN diagnostics)

text: Swab

text: DNA/RNA-shield (Zymo Research)

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text: vaginal metagenome

text: MGISeq PE150

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characteristic: ENA-CHECKLIST

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characteristic: INSDC last update

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text: no

characteristic: pregnancy

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characteristic: project name

text: FLOQSwab (COPAN diagnostics)

characteristic: sample collection device

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characteristic: sample collection method

text: DNA/RNA-shield (Zymo Research)

characteristic: sample storage medium

text: '-20 / -80

characteristic: sample storage temperature

text: vaginal metagenome

text: MGISeq PE150

characteristic: sequencing method

text: never

characteristic: smoking status


characteristic: ENA-CHECKLIST

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characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: antibiotics past 3 months

text: levonorgestrel intra-uterine system

characteristic: birth control

text: vagina

characteristic: broad-scale environmental context

characteristic: collection date

text: never

characteristic: douche

text: light

characteristic: drinking habits

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characteristic: environmental medium

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vaginal mucus

text: vagina

text: mid fornix

text: tampon

text: vaginal metagenome

characteristic: organism

text: no

text: MiMens

text: FLOQSwab (COPAN diagnostics)

text: Swab

text: DNA/RNA-shield (Zymo Research)

text: '-20 / -80

text: vaginal metagenome

text: MGISeq PE150

text: never


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: no

text: non-hormonal

text: vagina

text: weekly

text: light

text: vaginal swab

text: Denmark

characteristic: host age

text: vaginal mucus

characteristic: host body product

text: vagina

characteristic: host body site

characteristic: host body-mass index

text: allergies

characteristic: host disease status

characteristic: host subject id

text: mid fornix

characteristic: local environmental context

text: cup

characteristic: menstrual hygiene product

text: vaginal metagenome

text: no

characteristic: pregnancy

text: MiMens

characteristic: project name

text: FLOQSwab (COPAN diagnostics)

characteristic: sample collection device

text: Swab

characteristic: sample collection method

text: DNA/RNA-shield (Zymo Research)

characteristic: sample storage medium

text: '-20 / -80

characteristic: sample storage temperature

text: vaginal metagenome

text: MGISeq PE150

characteristic: sequencing method

text: former

characteristic: smoking status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: antibiotics past 3 months

text: non-hormonal

characteristic: birth control

text: vagina

characteristic: broad-scale environmental context

characteristic: collection date

text: never

characteristic: douche

text: light

characteristic: drinking habits

text: vaginal swab

characteristic: environmental medium

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: yeast infection

characteristic: gynecological disorder previous 3 months

text: vaginal mucus

text: vagina

text: mid fornix

text: tampon

text: vaginal metagenome

characteristic: organism

text: no

text: MiMens

text: FLOQSwab (COPAN diagnostics)

text: Swab

text: DNA/RNA-shield (Zymo Research)

text: '-20 / -80

text: vaginal metagenome

text: MGISeq PE150

text: never


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: no

text: non-hormonal

text: vagina

text: never

text: light

text: vaginal swab

text: Denmark

characteristic: host age

text: vaginal mucus

characteristic: host body product

text: vagina

characteristic: host body site

characteristic: host body-mass index

text: allergies

characteristic: host disease status

characteristic: host subject id

text: mid fornix

characteristic: local environmental context

text: tampon

characteristic: menstrual hygiene product

text: vaginal metagenome

text: no

characteristic: pregnancy

text: MiMens

characteristic: project name

text: FLOQSwab (COPAN diagnostics)

characteristic: sample collection device

text: Swab

characteristic: sample collection method

text: DNA/RNA-shield (Zymo Research)

characteristic: sample storage medium

text: '-20 / -80

characteristic: sample storage temperature

text: vaginal metagenome

text: MGISeq PE150

characteristic: sequencing method

text: never

characteristic: smoking status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: antibiotics past 3 months

text: levonorgestrel intra-uterine system

characteristic: birth control

text: vagina

characteristic: broad-scale environmental context

characteristic: collection date

text: weekly

characteristic: douche

text: light

characteristic: drinking habits

text: vaginal swab

characteristic: environmental medium

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vaginal mucus

text: vagina

text: mid fornix

text: pad

text: vaginal metagenome

characteristic: organism

text: no

text: MiMens

text: FLOQSwab (COPAN diagnostics)

text: Swab

text: DNA/RNA-shield (Zymo Research)

text: '-20 / -80

text: vaginal metagenome

text: MGISeq PE150

text: never


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: no

text: levonorgestrel intra-uterine system

text: vagina

text: never

text: light

text: vaginal swab

text: Denmark

characteristic: host age

text: vaginal mucus

characteristic: host body product

text: vagina

characteristic: host body site

characteristic: host body-mass index

text: allergies

characteristic: host disease status

characteristic: host subject id

text: mid fornix

characteristic: local environmental context

text: tampon

characteristic: menstrual hygiene product

text: vaginal metagenome

text: no

characteristic: pregnancy

text: MiMens

characteristic: project name

text: FLOQSwab (COPAN diagnostics)

characteristic: sample collection device

text: Swab

characteristic: sample collection method

text: DNA/RNA-shield (Zymo Research)

characteristic: sample storage medium

text: '-20 / -80

characteristic: sample storage temperature

text: vaginal metagenome

text: MGISeq PE150

characteristic: sequencing method

text: never

characteristic: smoking status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: antibiotics past 3 months

text: non-hormonal

characteristic: birth control

text: vagina

characteristic: broad-scale environmental context

characteristic: collection date

text: never

characteristic: douche

text: light

characteristic: drinking habits

text: vaginal swab

characteristic: environmental medium

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vaginal mucus

text: vagina

text: allergies

text: mid fornix

text: pad

text: vaginal metagenome

characteristic: organism

text: no

text: MiMens

text: FLOQSwab (COPAN diagnostics)

text: Swab

text: DNA/RNA-shield (Zymo Research)

text: '-20 / -80

text: vaginal metagenome

text: MGISeq PE150

text: former


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: no

text: combined oral contraceptive

text: vagina

text: never

text: light

text: vaginal swab

text: Denmark

characteristic: host age

text: vaginal mucus

characteristic: host body product

text: vagina

characteristic: host body site

characteristic: host body-mass index

characteristic: host subject id

text: mid fornix

characteristic: local environmental context

text: cup

characteristic: menstrual hygiene product

text: vaginal metagenome

text: no

characteristic: pregnancy

text: MiMens

characteristic: project name

text: FLOQSwab (COPAN diagnostics)

characteristic: sample collection device

text: Swab

characteristic: sample collection method

text: DNA/RNA-shield (Zymo Research)

characteristic: sample storage medium

text: '-20 / -80

characteristic: sample storage temperature

text: vaginal metagenome

text: MGISeq PE150

characteristic: sequencing method

text: never

characteristic: smoking status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: antibiotics past 3 months

text: non-hormonal

characteristic: birth control

text: vagina

characteristic: broad-scale environmental context

characteristic: collection date

text: never

characteristic: douche

text: moderate

characteristic: drinking habits

text: vaginal swab

characteristic: environmental medium

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: yeast infection

characteristic: gynecological disorder previous 3 months

text: vaginal mucus

text: vagina

text: mid fornix

text: tampon, cup

text: vaginal metagenome

characteristic: organism

text: no

text: MiMens

text: FLOQSwab (COPAN diagnostics)

text: Swab

text: DNA/RNA-shield (Zymo Research)

text: '-20 / -80

text: vaginal metagenome

text: MGISeq PE150

text: former


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: no

text: non-hormonal

text: vagina

text: never

text: moderate

text: vaginal swab

text: Denmark

text: bacterial vaginosis

characteristic: host age

text: vaginal mucus

characteristic: host body product

text: vagina

characteristic: host body site

characteristic: host body-mass index

text: allergies

characteristic: host disease status

characteristic: host subject id

text: mid fornix

characteristic: local environmental context

text: pad, cup

characteristic: menstrual hygiene product

text: vaginal metagenome

text: no

characteristic: pregnancy

text: MiMens

characteristic: project name

text: FLOQSwab (COPAN diagnostics)

characteristic: sample collection device

text: Swab

characteristic: sample collection method

text: DNA/RNA-shield (Zymo Research)

characteristic: sample storage medium

text: '-20 / -80

characteristic: sample storage temperature

text: vaginal metagenome

text: MGISeq PE150

characteristic: sequencing method

text: never

characteristic: smoking status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: antibiotics past 3 months

text: combined oral contraceptive

characteristic: birth control

text: vagina

characteristic: broad-scale environmental context

characteristic: collection date

text: twice weekly

characteristic: douche

text: light

characteristic: drinking habits

text: vaginal swab

characteristic: environmental medium

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vaginal mucus

text: vagina

text: mid fornix

text: tampon

text: vaginal metagenome

characteristic: organism

text: no

text: MiMens

text: FLOQSwab (COPAN diagnostics)

text: Swab

text: DNA/RNA-shield (Zymo Research)

text: '-20 / -80

text: vaginal metagenome

text: MGISeq PE150

text: never


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: no

text: combined oral contraceptive

text: vagina

text: never

text: moderate

text: vaginal swab

text: Denmark

characteristic: host age

text: vaginal mucus

characteristic: host body product

text: vagina

characteristic: host body site

characteristic: host body-mass index

text: migraine

characteristic: host disease status

characteristic: host subject id

text: mid fornix

characteristic: local environmental context

text: tampon, pad

characteristic: menstrual hygiene product

text: vaginal metagenome

text: no

characteristic: pregnancy

text: MiMens

characteristic: project name

text: FLOQSwab (COPAN diagnostics)

characteristic: sample collection device

text: Swab

characteristic: sample collection method

text: DNA/RNA-shield (Zymo Research)

characteristic: sample storage medium

text: '-20 / -80

characteristic: sample storage temperature

text: vaginal metagenome

text: MGISeq PE150

characteristic: sequencing method

text: former

characteristic: smoking status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: antibiotics past 3 months

text: non-hormonal

characteristic: birth control

text: vagina

characteristic: broad-scale environmental context

characteristic: collection date

text: never

characteristic: douche

text: moderate

characteristic: drinking habits

text: vaginal swab

characteristic: environmental medium

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vaginal mucus

text: vagina

text: mid fornix

text: cup

text: vaginal metagenome

characteristic: organism

text: no

text: MiMens

text: FLOQSwab (COPAN diagnostics)

text: Swab

text: DNA/RNA-shield (Zymo Research)

text: '-20 / -80

text: vaginal metagenome

text: MGISeq PE150

text: former


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: no

text: combined oral contraceptive

text: vagina

text: never

text: moderate

text: vaginal swab

text: Denmark

characteristic: host age

text: vaginal mucus

characteristic: host body product

text: vagina

characteristic: host body site

characteristic: host body-mass index

characteristic: host subject id

text: mid fornix

characteristic: local environmental context

text: tampon, pad, cup

characteristic: menstrual hygiene product

text: vaginal metagenome

text: no

characteristic: pregnancy

text: MiMens

characteristic: project name

text: FLOQSwab (COPAN diagnostics)

characteristic: sample collection device

text: Swab

characteristic: sample collection method

text: DNA/RNA-shield (Zymo Research)

characteristic: sample storage medium

text: '-20 / -80

characteristic: sample storage temperature

text: vaginal metagenome

text: MGISeq PE150

characteristic: sequencing method

text: never

characteristic: smoking status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: antibiotics past 3 months

text: levonorgestrel intra-uterine system

characteristic: birth control

text: vagina

characteristic: broad-scale environmental context

characteristic: collection date

text: never

characteristic: douche

text: light

characteristic: drinking habits

text: vaginal swab

characteristic: environmental medium

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vaginal mucus

text: vagina

text: mid fornix

text: vaginal metagenome

characteristic: organism

text: no

text: MiMens

text: FLOQSwab (COPAN diagnostics)

text: Swab

text: DNA/RNA-shield (Zymo Research)

text: '-20 / -80

text: vaginal metagenome

text: MGISeq PE150

text: former


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: no

text: non-hormonal

text: vagina

text: never

text: light

text: vaginal swab

text: Denmark

characteristic: host age

text: vaginal mucus

characteristic: host body product

text: vagina

characteristic: host body site

characteristic: host body-mass index

text: thyroid removed

characteristic: host disease status

characteristic: host subject id

text: mid fornix

characteristic: local environmental context

text: cup

characteristic: menstrual hygiene product

text: vaginal metagenome

text: no

characteristic: pregnancy

text: MiMens

characteristic: project name

text: FLOQSwab (COPAN diagnostics)

characteristic: sample collection device

text: Swab

characteristic: sample collection method

text: DNA/RNA-shield (Zymo Research)

characteristic: sample storage medium

text: '-20 / -80

characteristic: sample storage temperature

text: vaginal metagenome

text: MGISeq PE150

characteristic: sequencing method

text: former

characteristic: smoking status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: antibiotics past 3 months

text: combined oral contraceptive

characteristic: birth control

text: vagina

characteristic: broad-scale environmental context

characteristic: collection date

text: never

characteristic: douche

text: light

characteristic: drinking habits

text: vaginal swab

characteristic: environmental medium

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vaginal mucus

text: vagina

text: mid fornix

text: tampon, pad

text: vaginal metagenome

characteristic: organism

text: no

text: MiMens

text: FLOQSwab (COPAN diagnostics)

text: Swab

text: DNA/RNA-shield (Zymo Research)

text: '-20 / -80

text: vaginal metagenome

text: MGISeq PE150

text: never


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: no

text: non-hormonal

text: vagina

text: never

text: light

text: vaginal swab

text: Denmark

characteristic: host age

text: vaginal mucus

characteristic: host body product

text: vagina

characteristic: host body site

characteristic: host subject id

text: mid fornix

characteristic: local environmental context

text: pad, cup

characteristic: menstrual hygiene product

text: vaginal metagenome

text: no

characteristic: pregnancy

text: MiMens

characteristic: project name

text: FLOQSwab (COPAN diagnostics)

characteristic: sample collection device

text: Swab

characteristic: sample collection method

text: DNA/RNA-shield (Zymo Research)

characteristic: sample storage medium

text: '-20 / -80

characteristic: sample storage temperature

text: vaginal metagenome

text: MGISeq PE150

characteristic: sequencing method

text: never

characteristic: smoking status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: antibiotics past 3 months

text: non-hormonal

characteristic: birth control

text: vagina

characteristic: broad-scale environmental context

characteristic: collection date

text: never

characteristic: douche

text: light

characteristic: drinking habits

text: vaginal swab

characteristic: environmental medium

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: yeast infection

characteristic: gynecological disorder previous 3 months

text: vaginal mucus

text: vagina

characteristic: host body-mass index

text: mid fornix

text: tampon, pad, cup

text: vaginal metagenome

characteristic: organism

text: no

text: MiMens

text: FLOQSwab (COPAN diagnostics)

text: Swab

text: DNA/RNA-shield (Zymo Research)

text: '-20 / -80

text: vaginal metagenome

text: MGISeq PE150

text: never


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: no

text: combined oral contraceptive

text: vagina

text: twice weekly

text: light

text: vaginal swab

text: Denmark

characteristic: host age

text: vaginal mucus

characteristic: host body product

text: vagina

characteristic: host body site

text: allergies

characteristic: host disease status

characteristic: host subject id

text: mid fornix

characteristic: local environmental context

text: cup

characteristic: menstrual hygiene product

text: vaginal metagenome

text: no

characteristic: pregnancy

text: MiMens

characteristic: project name

text: FLOQSwab (COPAN diagnostics)

characteristic: sample collection device

text: Swab

characteristic: sample collection method

text: DNA/RNA-shield (Zymo Research)

characteristic: sample storage medium

text: '-20 / -80

characteristic: sample storage temperature

text: vaginal metagenome

text: MGISeq PE150

characteristic: sequencing method

text: never

characteristic: smoking status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: antibiotics past 3 months

text: non-hormonal

characteristic: birth control

text: vagina

characteristic: broad-scale environmental context

characteristic: collection date

text: never

characteristic: douche

text: light

characteristic: drinking habits

text: vaginal swab

characteristic: environmental medium

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vaginal mucus

text: vagina

characteristic: host body-mass index

text: mid fornix

text: cup

text: vaginal metagenome

characteristic: organism

text: no

text: MiMens

text: FLOQSwab (COPAN diagnostics)

text: Swab

text: DNA/RNA-shield (Zymo Research)

text: '-20 / -80

text: vaginal metagenome

text: MGISeq PE150

text: former


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: no

text: non-hormonal

text: vagina

text: never

text: light

text: vaginal swab

text: Denmark

characteristic: host age

text: vaginal mucus

characteristic: host body product

text: vagina

characteristic: host body site

characteristic: host subject id

text: mid fornix

characteristic: local environmental context

text: pad

characteristic: menstrual hygiene product

text: vaginal metagenome

text: no

characteristic: pregnancy

text: MiMens

characteristic: project name

text: FLOQSwab (COPAN diagnostics)

characteristic: sample collection device

text: Swab

characteristic: sample collection method

text: DNA/RNA-shield (Zymo Research)

characteristic: sample storage medium

text: '-20 / -80

characteristic: sample storage temperature

text: vaginal metagenome

text: MGISeq PE150

characteristic: sequencing method

text: never

characteristic: smoking status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: antibiotics past 3 months

text: levonorgestrel intra-uterine system

characteristic: birth control

text: vagina

characteristic: broad-scale environmental context

characteristic: collection date

text: never

characteristic: douche

text: light

characteristic: drinking habits

text: vaginal swab

characteristic: environmental medium

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vaginal mucus

text: vagina

characteristic: host body-mass index

text: mid fornix

text: vaginal metagenome

characteristic: organism

text: 341F: 5’-CCTACGGGNGGCWGCAG-3’ / 805R: 5’-GGACTACHVGGGTWTCTAAT-3’

characteristic: pcr primers

text: no

text: MiMens

text: FLOQSwab (COPAN diagnostics)

text: Swab

text: DNA/RNA-shield (Zymo Research)

text: '-20 / -80

text: vaginal metagenome

text: Illumina MiSeq PE300

text: seldom


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: yes

text: combined oral contraceptive

text: vagina

text: never

text: moderate

text: vaginal swab

text: Denmark

text: Mycoplasma in the previous 3 months

characteristic: gynecological disorder

characteristic: host age

text: vaginal mucus

characteristic: host body product

text: vagina

characteristic: host body site

characteristic: host subject id

text: mid fornix

characteristic: local environmental context

text: tampon, pad

characteristic: menstrual hygiene product

text: vaginal metagenome

text: no

characteristic: pregnancy

text: MiMens

characteristic: project name

text: FLOQSwab (COPAN diagnostics)

characteristic: sample collection device

text: Swab

characteristic: sample collection method

text: DNA/RNA-shield (Zymo Research)

characteristic: sample storage medium

text: '-20 / -80

characteristic: sample storage temperature

text: vaginal metagenome

text: Illumina MiSeq PE300

characteristic: sequencing method

text: previously

characteristic: smoking status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: antibiotics past 3 months

text: combined oral contraceptive

characteristic: birth control

text: vagina

characteristic: broad-scale environmental context

characteristic: collection date

text: never

characteristic: douche

text: light

characteristic: drinking habits

text: vaginal swab

characteristic: environmental medium

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vaginal mucus

text: vagina

characteristic: host body-mass index

text: mid fornix

text: tampon, pad

text: vaginal metagenome

characteristic: organism

characteristic: pcr primers

text: no

text: MiMens

text: FLOQSwab (COPAN diagnostics)

text: Swab

text: DNA/RNA-shield (Zymo Research)

text: '-20 / -80

text: vaginal metagenome

text: Illumina MiSeq PE300

text: previously


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: no

text: Non-hormonal

text: vagina

text: never

text: light

text: vaginal swab

text: Denmark

characteristic: host age

text: vaginal mucus

characteristic: host body product

text: vagina

characteristic: host body site

characteristic: host subject id

text: mid fornix

characteristic: local environmental context

text: tampon, pad

characteristic: menstrual hygiene product

text: vaginal metagenome

text: no

characteristic: pregnancy

text: MiMens

characteristic: project name

text: FLOQSwab (COPAN diagnostics)

characteristic: sample collection device

text: Swab

characteristic: sample collection method

text: DNA/RNA-shield (Zymo Research)

characteristic: sample storage medium

text: '-20 / -80

characteristic: sample storage temperature

text: vaginal metagenome

text: Illumina MiSeq PE300

characteristic: sequencing method

text: never

characteristic: smoking status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: antibiotics past 3 months

text: levonorgestrel intra-uterine system

characteristic: birth control

text: vagina

characteristic: broad-scale environmental context

characteristic: collection date

text: never

characteristic: douche

text: moderate

characteristic: drinking habits

text: vaginal swab

characteristic: environmental medium

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vaginal mucus

text: vagina

characteristic: host body-mass index

text: allergies

characteristic: host disease status

text: mid fornix

text: cup

text: vaginal metagenome

characteristic: organism

characteristic: pcr primers

text: no

text: MiMens

text: FLOQSwab (COPAN diagnostics)

text: Swab

text: DNA/RNA-shield (Zymo Research)

text: '-20 / -80

text: vaginal metagenome

text: Illumina MiSeq PE300

text: daily


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: no

text: combined oral contraceptive

text: vagina

text: never

text: light

text: vaginal swab

text: Denmark

characteristic: host age

text: vaginal mucus

characteristic: host body product

text: vagina

characteristic: host body site

characteristic: host subject id

text: mid fornix

characteristic: local environmental context

text: cup

characteristic: menstrual hygiene product

text: vaginal metagenome

text: no

characteristic: pregnancy

text: MiMens

characteristic: project name

text: FLOQSwab (COPAN diagnostics)

characteristic: sample collection device

text: Swab

characteristic: sample collection method

text: DNA/RNA-shield (Zymo Research)

characteristic: sample storage medium

text: '-20 / -80

characteristic: sample storage temperature

text: vaginal metagenome

text: Illumina MiSeq PE300

characteristic: sequencing method

text: never

characteristic: smoking status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: yes

characteristic: antibiotics past 3 months

text: Non-hormonal

characteristic: birth control

text: vagina

characteristic: broad-scale environmental context

characteristic: collection date

text: never

characteristic: douche

text: moderate

characteristic: drinking habits

text: vaginal swab

characteristic: environmental medium

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Chlamydia in the previous 3 months

characteristic: gynecological disorder

text: vaginal mucus

text: vagina

text: mid fornix

text: tampon, pad

text: vaginal metagenome

characteristic: organism

characteristic: pcr primers

text: no

text: MiMens

text: FLOQSwab (COPAN diagnostics)

text: Swab

text: DNA/RNA-shield (Zymo Research)

text: '-20 / -80

text: vaginal metagenome

text: Illumina MiSeq PE300

text: seldom


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: no

text: Non-hormonal

text: vagina

text: never

text: light

text: vaginal swab

text: Denmark

characteristic: host age

text: vaginal mucus

characteristic: host body product

text: vagina

characteristic: host body site

characteristic: host body-mass index

characteristic: host subject id

text: mid fornix

characteristic: local environmental context

text: pad, cup

characteristic: menstrual hygiene product

text: vaginal metagenome

text: no

characteristic: pregnancy

text: MiMens

characteristic: project name

text: FLOQSwab (COPAN diagnostics)

characteristic: sample collection device

text: Swab

characteristic: sample collection method

text: DNA/RNA-shield (Zymo Research)

characteristic: sample storage medium

text: '-20 / -80

characteristic: sample storage temperature

text: vaginal metagenome

text: Illumina MiSeq PE300

characteristic: sequencing method

text: weekly

characteristic: smoking status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: antibiotics past 3 months

text: levonorgestrel intra-uterine system

characteristic: birth control

text: vagina

characteristic: broad-scale environmental context

characteristic: collection date

text: twice weekly

characteristic: douche

text: light

characteristic: drinking habits

text: vaginal swab

characteristic: environmental medium

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vaginal mucus

text: vagina

text: Raynaud’s syndrome

characteristic: host disease status

text: mid fornix

text: vaginal metagenome

characteristic: organism

characteristic: pcr primers

text: no

text: MiMens

text: FLOQSwab (COPAN diagnostics)

text: Swab

text: DNA/RNA-shield (Zymo Research)

text: '-20 / -80

text: vaginal metagenome

text: Illumina MiSeq PE300

text: never


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: no

text: levonorgestrel intra-uterine system

text: vagina

text: never

text: light

text: vaginal swab

text: Denmark

characteristic: host age

text: vaginal mucus

characteristic: host body product

text: vagina

characteristic: host body site

characteristic: host body-mass index

characteristic: host subject id

text: mid fornix

characteristic: local environmental context

text: cup

characteristic: menstrual hygiene product

text: vaginal metagenome

text: no

characteristic: pregnancy

text: MiMens

characteristic: project name

text: FLOQSwab (COPAN diagnostics)

characteristic: sample collection device

text: Swab

characteristic: sample collection method

text: DNA/RNA-shield (Zymo Research)

characteristic: sample storage medium

text: '-20 / -80

characteristic: sample storage temperature

text: vaginal metagenome

text: Illumina MiSeq PE300

characteristic: sequencing method

text: never

characteristic: smoking status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: antibiotics past 3 months

text: combined oral contraceptive

characteristic: birth control

text: vagina

characteristic: broad-scale environmental context

characteristic: collection date

text: never

characteristic: douche

text: light

characteristic: drinking habits

text: vaginal swab

characteristic: environmental medium

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vaginal mucus

text: vagina

text: mid fornix

text: pad, tampon, cup

text: vaginal metagenome

characteristic: organism

characteristic: pcr primers

text: no

text: MiMens

text: FLOQSwab (COPAN diagnostics)

text: Swab

text: DNA/RNA-shield (Zymo Research)

text: '-20 / -80

text: vaginal metagenome

text: Illumina MiSeq PE300

text: never


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: no

text: Non-hormonal

text: vagina

text: never

text: light

text: vaginal swab

text: Denmark

characteristic: host age

text: vaginal mucus

characteristic: host body product

text: vagina

characteristic: host body site

characteristic: host body-mass index

characteristic: host subject id

text: mid fornix

characteristic: local environmental context

text: pad

characteristic: menstrual hygiene product

text: vaginal metagenome

text: no

characteristic: pregnancy

text: MiMens

characteristic: project name

text: FLOQSwab (COPAN diagnostics)

characteristic: sample collection device

text: Swab

characteristic: sample collection method

text: DNA/RNA-shield (Zymo Research)

characteristic: sample storage medium

text: '-20 / -80

characteristic: sample storage temperature

text: vaginal metagenome

text: Illumina MiSeq PE300

characteristic: sequencing method

text: never

characteristic: smoking status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: antibiotics past 3 months

text: Non-hormonal

characteristic: birth control

text: vagina

characteristic: broad-scale environmental context

characteristic: collection date

text: twice weekly

characteristic: douche

text: light

characteristic: drinking habits

text: vaginal swab

characteristic: environmental medium

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vaginal mucus

text: vagina

text: mid fornix

text: pad

text: vaginal metagenome

characteristic: organism

characteristic: pcr primers

text: no

text: MiMens

text: FLOQSwab (COPAN diagnostics)

text: Swab

text: DNA/RNA-shield (Zymo Research)

text: '-20 / -80

text: vaginal metagenome

text: Illumina MiSeq PE300

text: never


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: no

text: combined oral contraceptive

text: vagina

text: never

text: moderate

text: vaginal swab

text: Denmark

characteristic: host age

text: vaginal mucus

characteristic: host body product

text: vagina

characteristic: host body site

text: allergies

characteristic: host disease status

characteristic: host subject id

text: mid fornix

characteristic: local environmental context

text: tampon, pad

characteristic: menstrual hygiene product

text: vaginal metagenome

text: no

characteristic: pregnancy

text: MiMens

characteristic: project name

text: FLOQSwab (COPAN diagnostics)

characteristic: sample collection device

text: Swab

characteristic: sample collection method

text: DNA/RNA-shield (Zymo Research)

characteristic: sample storage medium

text: '-20 / -80

characteristic: sample storage temperature

text: vaginal metagenome

text: Illumina MiSeq PE300

characteristic: sequencing method

text: previously

characteristic: smoking status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: antibiotics past 3 months

text: levonorgestrel intra-uterine system

characteristic: birth control

text: vagina

characteristic: broad-scale environmental context

characteristic: collection date

text: never

characteristic: douche

text: heavy

characteristic: drinking habits

text: vaginal swab

characteristic: environmental medium

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vaginal mucus

text: vagina

characteristic: host body-mass index

text: mid fornix

text: tampon

text: vaginal metagenome

characteristic: organism

characteristic: pcr primers

text: no

text: MiMens

text: FLOQSwab (COPAN diagnostics)

text: Swab

text: DNA/RNA-shield (Zymo Research)

text: '-20 / -80

text: vaginal metagenome

text: Illumina MiSeq PE300

text: daily


E-MTAB-12787:Sample 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSERM U1015 Gustave Roussy

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: E-MTAB-12787:Sample 1

tag: Namespace:INSERM U1015 Gustave Roussy

text: ArrayExpress

characteristic: broker name

text: T cell

text: house mouse

characteristic: common name

text: Protocols: MCA205 fibrosarcoma (0.8x10^6 cells) was incoculated subcutaneously in WT C57BL6 mice. a4b7hi and a4b7- CD4+ T cells were single cell sorted by flow cytometry 10 days after tumor inoculation from the mesenteric lymph node.. α4β7+ and α4β7- CD4+ T cells were isolated from mLN by flow cytometry. Qiagen RNA extraction cDNA protocol synthesis from mRNA

characteristic: description

text: adult

characteristic: developmental stage

text: MCA205 fibrosarcoma (0.8x10^6 cells) incoculated subcutaneously

characteristic: growth condition

text: CD4 positive; a4b7-

characteristic: immunophenotype

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: mesenteric lymph node

characteristic: organism part

text: Mus musculus

characteristic: strain

text: Sample 1

characteristic: title


E-MTAB-12787:Sample 2

characteristic: ENA-CHECKLIST

text: INSERM U1015 Gustave Roussy

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: E-MTAB-12787:Sample 2

characteristic: Submitter Id

text: ArrayExpress

text: T cell

text: house mouse

text: adult

text: CD4 positive; a4b7-

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: mesenteric lymph node

text: Mus musculus

text: Sample 2


E-MTAB-12787:Sample 3

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSERM U1015 Gustave Roussy

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-12787:Sample 3

text: ArrayExpress

text: T cell

text: house mouse

text: adult

text: CD4 positive; a4b7-

text: not applicable

text: Mus musculus

text: Mus musculus

text: mesenteric lymph node

text: Mus musculus

text: Sample 3


E-MTAB-12787:Sample 4

text: INSERM U1015 Gustave Roussy

text: public

characteristic: INSDC status

text: E-MTAB-12787:Sample 4

text: ArrayExpress

characteristic: broker name

text: T cell

text: house mouse

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: CD4 positive; a4b7High

text: not applicable

text: Mus musculus

text: Mus musculus

text: mesenteric lymph node

text: Mus musculus

text: Sample 4


E-MTAB-12787:Sample 5

text: INSERM U1015 Gustave Roussy

text: public

text: E-MTAB-12787:Sample 5

text: ArrayExpress

text: T cell

text: house mouse

text: adult

characteristic: growth condition

text: CD4 positive; a4b7High

characteristic: immunophenotype

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: mesenteric lymph node

characteristic: organism part

text: Mus musculus

characteristic: strain

text: Sample 5


E-MTAB-12787:Sample 6

characteristic: ENA-CHECKLIST

text: INSERM U1015 Gustave Roussy

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: E-MTAB-12787:Sample 6

characteristic: Submitter Id

text: ArrayExpress

text: T cell

text: house mouse

text: adult

text: CD4 positive; a4b7High

text: not applicable

text: Mus musculus

text: Mus musculus

text: mesenteric lymph node

text: Mus musculus

text: Sample 6

characteristic: title


E-MTAB-12787:Sample 7

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSERM U1015 Gustave Roussy

characteristic: INSDC center name

text: public

text: E-MTAB-12787:Sample 7

text: ArrayExpress

text: T cell

text: house mouse

text: adult

text: CD4 positive; a4b7High

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: mesenteric lymph node

text: Mus musculus

text: Sample 7


text: Hospital Dr. Luis Calvo Mackenna

characteristic: INSDC first public

text: public

characteristic: INSDC status

tag: Namespace:Hospital Dr. Luis Calvo Mackenna

text: Human gut metagenome

characteristic: description

text: gut metagenome

text: gut metagenome


text: EBP Norway

text: public

tag: Namespace:EBP Norway

text: ELIXIR-Norway

characteristic: broker name

text: Morten Helberg

text: University of Oslo

characteristic: collecting institution

characteristic: collection date

text: common eider

characteristic: common name

text: Adult female trapped at nest, ringed, incubating with 3 eggs in nest

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Nesodden, Søndre Skjælholmen

characteristic: geographic location (region and locality)

text: Island (ENVO:00000098)

characteristic: habitat

text: Adult

characteristic: lifestage

text: Somateria mollissima

text: Blood

text: Somateria mollissima (common eider) genome assembly, bSomMol1

characteristic: project name

text: Somateria mollissima

text: Female

characteristic: sex

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hospital Dr. Luis Calvo Mackenna

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Demultiplexed rRNA 16S sequences

text: gut metagenome

characteristic: organism

text: gut metagenome

characteristic: title


text: KAUST, CDA, Simon Krattinger's group

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-04-04-2023-14:49:06:480-3674

tag: Namespace:KAUST, CDA, Simon Krattinger's group

text: Triticum monococcum

characteristic: sample alias

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-04-04-2023-14:49:06:480-3675

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-04-04-2023-14:49:06:481-3676

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-04-04-2023-14:49:06:481-3677

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-04-04-2023-14:49:06:481-3678

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-04-04-2023-14:49:06:481-3679

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-04-04-2023-14:49:06:481-3680

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-04-04-2023-14:49:06:481-3681

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-04-04-2023-14:49:06:481-3682

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-04-04-2023-14:49:06:481-3683

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-04-04-2023-14:49:06:481-3684

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-04-04-2023-14:49:06:481-3685

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-04-04-2023-14:49:06:481-3686

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-04-04-2023-14:49:06:481-3687

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-04-04-2023-14:49:06:481-3688

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-04-04-2023-14:49:06:481-3689

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-05-04-2023-13:00:37:492-49311

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-05-04-2023-13:00:37:492-49312

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-05-04-2023-13:00:37:492-49313

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-05-04-2023-13:00:37:492-49314

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-05-04-2023-13:00:37:492-49315

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-05-04-2023-13:00:37:492-49316

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-05-04-2023-13:00:37:492-49317

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-05-04-2023-13:00:37:492-49318

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-05-04-2023-13:00:37:492-49319

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-05-04-2023-13:00:37:492-49320

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-05-04-2023-13:00:37:492-49321

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-05-04-2023-13:00:37:492-49322

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-05-04-2023-13:00:37:492-49323

text: Triticum monococcum

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-05-04-2023-13:00:37:492-49324

text: Triticum monococcum

text: Triticum monococcum


text: public

tag: Namespace:Max Planck Institute for Evolutionary Anthropology

text: Tooth from archaeological human remains

characteristic: description

text: Germany

characteristic: geographic location (country and/or sea)

text: Saxony-Anhalt

characteristic: geographic location (region and locality)

text: Homo sapiens

characteristic: host scientific name

text: burial

text: Yersinia pestis

text: Yersinia pestis

text: Cementum of the tooth from archaeological human remains


characteristic: ENA-CHECKLIST

text: Max Planck Institute for Evolutionary Anthropology

text: public

text: Tooth from archaeological human remains

text: Germany

text: Saxony-Anhalt

text: Homo sapiens

text: burial

text: Yersinia pestis

text: Yersinia pestis

text: Dentin of the tooth from archaeological human remains


characteristic: ENA-FIRST-PUBLIC

text: public

text: Tooth from archaeological human remains

text: Germany

text: Saxony-Anhalt

text: Homo sapiens

text: burial

text: Yersinia pestis

text: Yersinia pestis

text: Pulp chamber of the tooth from archaeological human remains


characteristic: ENA-LAST-UPDATE

text: public

text: Vertebra from archaeological human remains

text: Germany

text: Saxony-Anhalt

text: Homo sapiens

text: burial

text: Yersinia pestis

text: Yersinia pestis

text: Superior Vertebral Arch from archaeological human remains


characteristic: External Id

text: public

text: Femur from archaeological human remains

text: Germany

text: Saxony-Anhalt

text: Homo sapiens

text: burial

text: Yersinia pestis

text: Yersinia pestis

text: Femur from archaeological human remains


characteristic: INSDC center name

text: public

tag: Namespace:Swedish University of Agricultural Sciences

unit: L

characteristic: amount or size of sample collected

text: not provided

characteristic: area of sampling site

characteristic: collection date

text: Untreated wastewater was collected in Örebro at Skebäcks reningsverk on 2021-11-01 over 24 hours using a flow compensated sampler. Viral genomic material was concentrated and extracted by the direct capture method using the Maxwell RSC Enviro Total Nucleic Acid Kit (Promega Corporation, Madison, WI, USA, Cat # AS1831) according to the manufacturer’s protocol (Promega, # TM663 Rev 4/22) at SEEC-SLU. Sequencing libraries were made using Ion AmpliSeq SARS-CoV-2 Insight Research Assay (Thermo Fisher Scientific, Waltham, MA, USA, Cat # A51306) and the SuperScript™ VILO™ cDNA Synthesis Kit (Thermo Fisher, # 11754050) according to the manufacturer’s protocols “Reverse transcribe RNA with the SuperScript™ VILO™ cDNA Synthesis Kit” (Thermo Fisher, # MAN0019277, Rev B.0, pp. 3-4) and “Prepare libraries on the Ion Chef™ Instrument” (Thermo Fisher, # MAN0024915 Rev B.0, Ch 4, pp. 42-43) at the National Genomic Infrastructure (NGI) at SciLifeLab in Uppsala, Sweden. Sequencing was performed on the Ion S5 XL System (Thermo Fisher, # A27214) multiplexing using Torrent Suite Software version 5.16.1 configured according to the manufacturer’s protocol (Thermo Fisher, # MAN0024915 Rev B.0, Ch 5) at NGI.

text: Sweden

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Örebro

text: virus

characteristic: investigation type

text: Skebäcks reningsverk

characteristic: name of the sampling site

text: Ion AmpliSeq SARS-CoV-2 Insight Research Assay with SuperScript™ VILO™ cDNA Synthesis Kit using Ion Chef™ (Thermo Fisher, # A51306, # 11754050, # MAN0019277, Rev B.0, pp. 3-4, # MAN0024915 Rev B.0, Ch 4, pp. 42-43)

characteristic: nucleic acid amplification

text: TNA concentration using Maxwell RSC Enviro Total Nucleic Acid Kit (Promega, # AS1831 & # TM663 Rev 4/22)

characteristic: nucleic acid extraction

text: wastewater metagenome

characteristic: population size of the catchment area

characteristic: receipt date

unit: day

characteristic: sample storage duration

text: not provided

characteristic: sample storage location

characteristic: sample transportation date

characteristic: sample transportation time

text: 24 hour period, using a flow compensated sampler

characteristic: sampling time point

text: wastewater metagenome

text: wastewater treatment plant (municipal)

characteristic: sewage type

text: not provided

characteristic: size of the catchment area

characteristic: surveillance target

text: Severe acute respiratory syndrome coronavirus 2

characteristic: surveillance target (scientific name)

text: 2021-W44 Örebro Amplified SARS-CoV-2 RNA from wastewater


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Swedish University of Agricultural Sciences

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

text: not provided

characteristic: area of sampling site

characteristic: collection date

text: Untreated wastewater was collected in Umeå at Öns reningsverk on 2021-11-01 over 24 hours using a flow compensated sampler. Viral genomic material was concentrated and extracted by the direct capture method using the Maxwell RSC Enviro Total Nucleic Acid Kit (Promega Corporation, Madison, WI, USA, Cat # AS1831) according to the manufacturer’s protocol (Promega, # TM663 Rev 4/22) at SEEC-SLU. Sequencing libraries were made using Ion AmpliSeq SARS-CoV-2 Insight Research Assay (Thermo Fisher Scientific, Waltham, MA, USA, Cat # A51306) and the SuperScript™ VILO™ cDNA Synthesis Kit (Thermo Fisher, # 11754050) according to the manufacturer’s protocols “Reverse transcribe RNA with the SuperScript™ VILO™ cDNA Synthesis Kit” (Thermo Fisher, # MAN0019277, Rev B.0, pp. 3-4) and “Prepare libraries on the Ion Chef™ Instrument” (Thermo Fisher, # MAN0024915 Rev B.0, Ch 4, pp. 42-43) at the National Genomic Infrastructure (NGI) at SciLifeLab in Uppsala, Sweden. Sequencing was performed on the Ion S5 XL System (Thermo Fisher, # A27214) multiplexing using Torrent Suite Software version 5.16.1 configured according to the manufacturer’s protocol (Thermo Fisher, # MAN0024915 Rev B.0, Ch 5) at NGI.

characteristic: description

text: Sweden

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Umeå

characteristic: geographic location (region and locality)

text: virus

text: Öns reningsverk

text: wastewater metagenome

characteristic: organism

text: not provided

text: wastewater metagenome

text: wastewater treatment plant (municipal)

text: not provided

text: 2021-W44 Umeå Amplified SARS-CoV-2 RNA from wastewater

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: not provided

text: Untreated wastewater was collected in Kalmar at Kalmarsundsverket on 2021-11-15 over 24 hours using a flow compensated sampler. Viral genomic material was concentrated and extracted by the direct capture method using the Maxwell RSC Enviro Total Nucleic Acid Kit (Promega Corporation, Madison, WI, USA, Cat # AS1831) according to the manufacturer’s protocol (Promega, # TM663 Rev 4/22) at SEEC-SLU. Sequencing libraries were made using Ion AmpliSeq SARS-CoV-2 Insight Research Assay (Thermo Fisher Scientific, Waltham, MA, USA, Cat # A51306) and the SuperScript™ VILO™ cDNA Synthesis Kit (Thermo Fisher, # 11754050) according to the manufacturer’s protocols “Reverse transcribe RNA with the SuperScript™ VILO™ cDNA Synthesis Kit” (Thermo Fisher, # MAN0019277, Rev B.0, pp. 3-4) and “Prepare libraries on the Ion Chef™ Instrument” (Thermo Fisher, # MAN0024915 Rev B.0, Ch 4, pp. 42-43) at the National Genomic Infrastructure (NGI) at SciLifeLab in Uppsala, Sweden. Sequencing was performed on the Ion S5 XL System (Thermo Fisher, # A27214) multiplexing using Torrent Suite Software version 5.16.1 configured according to the manufacturer’s protocol (Thermo Fisher, # MAN0024915 Rev B.0, Ch 5) at NGI.

text: Sweden

characteristic: geographic location (longitude)

text: Kalmar

text: virus

characteristic: investigation type

text: Kalmarsundsverket

characteristic: name of the sampling site

characteristic: nucleic acid amplification

characteristic: nucleic acid extraction

text: wastewater metagenome

characteristic: population size of the catchment area

characteristic: receipt date

characteristic: sample storage duration

text: not provided

characteristic: sample storage location

characteristic: sample transportation date

characteristic: sample transportation time

characteristic: sampling time point

text: wastewater metagenome

text: wastewater treatment plant (municipal)

characteristic: sewage type

text: not provided

characteristic: size of the catchment area

characteristic: surveillance target

characteristic: surveillance target (scientific name)

text: 2021-W46 Kalmar Amplified SARS-CoV-2 RNA from wastewater


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

text: not provided

characteristic: area of sampling site

characteristic: collection date

text: Untreated wastewater was collected in Örebro at Skebäcks reningsverk on 2021-11-15 over 24 hours using a flow compensated sampler. Viral genomic material was concentrated and extracted by the direct capture method using the Maxwell RSC Enviro Total Nucleic Acid Kit (Promega Corporation, Madison, WI, USA, Cat # AS1831) according to the manufacturer’s protocol (Promega, # TM663 Rev 4/22) at SEEC-SLU. Sequencing libraries were made using Ion AmpliSeq SARS-CoV-2 Insight Research Assay (Thermo Fisher Scientific, Waltham, MA, USA, Cat # A51306) and the SuperScript™ VILO™ cDNA Synthesis Kit (Thermo Fisher, # 11754050) according to the manufacturer’s protocols “Reverse transcribe RNA with the SuperScript™ VILO™ cDNA Synthesis Kit” (Thermo Fisher, # MAN0019277, Rev B.0, pp. 3-4) and “Prepare libraries on the Ion Chef™ Instrument” (Thermo Fisher, # MAN0024915 Rev B.0, Ch 4, pp. 42-43) at the National Genomic Infrastructure (NGI) at SciLifeLab in Uppsala, Sweden. Sequencing was performed on the Ion S5 XL System (Thermo Fisher, # A27214) multiplexing using Torrent Suite Software version 5.16.1 configured according to the manufacturer’s protocol (Thermo Fisher, # MAN0024915 Rev B.0, Ch 5) at NGI.

characteristic: description

text: Sweden

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Örebro

characteristic: geographic location (region and locality)

text: virus

text: Skebäcks reningsverk

text: wastewater metagenome

characteristic: organism

text: not provided

text: wastewater metagenome

text: wastewater treatment plant (municipal)

text: not provided

text: 2021-W46 Örebro Amplified SARS-CoV-2 RNA from wastewater

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: not provided

text: Untreated wastewater was collected in Umeå at Öns reningsverk on 2021-11-15 over 24 hours using a flow compensated sampler. Viral genomic material was concentrated and extracted by the direct capture method using the Maxwell RSC Enviro Total Nucleic Acid Kit (Promega Corporation, Madison, WI, USA, Cat # AS1831) according to the manufacturer’s protocol (Promega, # TM663 Rev 4/22) at SEEC-SLU. Sequencing libraries were made using Ion AmpliSeq SARS-CoV-2 Insight Research Assay (Thermo Fisher Scientific, Waltham, MA, USA, Cat # A51306) and the SuperScript™ VILO™ cDNA Synthesis Kit (Thermo Fisher, # 11754050) according to the manufacturer’s protocols “Reverse transcribe RNA with the SuperScript™ VILO™ cDNA Synthesis Kit” (Thermo Fisher, # MAN0019277, Rev B.0, pp. 3-4) and “Prepare libraries on the Ion Chef™ Instrument” (Thermo Fisher, # MAN0024915 Rev B.0, Ch 4, pp. 42-43) at the National Genomic Infrastructure (NGI) at SciLifeLab in Uppsala, Sweden. Sequencing was performed on the Ion S5 XL System (Thermo Fisher, # A27214) multiplexing using Torrent Suite Software version 5.16.1 configured according to the manufacturer’s protocol (Thermo Fisher, # MAN0024915 Rev B.0, Ch 5) at NGI.

text: Sweden

characteristic: geographic location (longitude)

text: Umeå

text: virus

characteristic: investigation type

text: Öns reningsverk

characteristic: name of the sampling site

characteristic: nucleic acid amplification

characteristic: nucleic acid extraction

text: wastewater metagenome

characteristic: population size of the catchment area

characteristic: receipt date

characteristic: sample storage duration

text: not provided

characteristic: sample storage location

characteristic: sample transportation date

characteristic: sample transportation time

characteristic: sampling time point

text: wastewater metagenome

text: wastewater treatment plant (municipal)

characteristic: sewage type

text: not provided

characteristic: size of the catchment area

characteristic: surveillance target

characteristic: surveillance target (scientific name)

text: 2021-W46 Umeå Amplified SARS-CoV-2 RNA from wastewater


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: amount or size of sample collected

text: not provided

characteristic: area of sampling site

characteristic: collection date

text: Untreated wastewater was collected in Uppsala at Kungsängsverket over 1 week leading up to 2021-11-22. Daily samples were collected over 24 hours using a flow compensated sampler then combined flow-proportionally into a composite weekly sample. Viral genomic material was concentrated and extracted by the direct capture method using the Maxwell RSC Enviro Total Nucleic Acid Kit (Promega Corporation, Madison, WI, USA, Cat # AS1831) according to the manufacturer’s protocol (Promega, # TM663 Rev 4/22) at SEEC-SLU. Sequencing libraries were made using Ion AmpliSeq SARS-CoV-2 Insight Research Assay (Thermo Fisher Scientific, Waltham, MA, USA, Cat # A51306) and the SuperScript™ VILO™ cDNA Synthesis Kit (Thermo Fisher, # 11754050) according to the manufacturer’s protocols “Reverse transcribe RNA with the SuperScript™ VILO™ cDNA Synthesis Kit” (Thermo Fisher, # MAN0019277, Rev B.0, pp. 3-4) and “Prepare libraries on the Ion Chef™ Instrument” (Thermo Fisher, # MAN0024915 Rev B.0, Ch 4, pp. 42-43) at the National Genomic Infrastructure (NGI) at SciLifeLab in Uppsala, Sweden. Sequencing was performed on the Ion S5 XL System (Thermo Fisher, # A27214) multiplexing using Torrent Suite Software version 5.16.1 configured according to the manufacturer’s protocol (Thermo Fisher, # MAN0024915 Rev B.0, Ch 5) at NGI.

characteristic: description

text: Sweden

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Uppsala

characteristic: geographic location (region and locality)

text: virus

text: Kungsängsverket

text: wastewater metagenome

characteristic: organism

text: not provided

text: 1 week period, flow-proportionally combined from daily samples, daily sampling over 24 hour period, using a flow compensated sampler

text: wastewater metagenome

text: wastewater treatment plant (municipal)

text: not provided

text: 2021-W47 Uppsala Amplified SARS-CoV-2 RNA from wastewater

characteristic: title