text: Cancer Research UK Cambridge Institute

text: public

text: human

text: COV413A Cell Line RNA

text: Homo sapiens

text: Homo sapiens


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Cancer Research UK Cambridge Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Cancer Research UK Cambridge Institute

characteristic: Submitter Id

text: human

characteristic: common name

text: CAOV4 Cell Line RNA

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: title


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: FUOV1 Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: NIH:OVCAR3 Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: OVKATE

text: human

text: OVKATE Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: IOSE4 Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: IGROV1 Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: NA12878 Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: PEA1 Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: PEA2 Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: OVCAR-5 Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: HOC-7 Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: PEO6 Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: COV362.4 Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: OV17R Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: ES2 Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: OVCAR-8 Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: TOV-3291 G Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: OV-90 (mes-masson) Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: TOV-3121 EP Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: OV-2295 Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: TOV-2223 G Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: TOV-2295 Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: OV-3133 Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: TOV-1369 M Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: OV-2295 (2) Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: OV-866 (2) Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: TOV-1946 Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: OV-1946 Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: CIOV7 Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: OV-2978 Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: OAW42 Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: OV-2085 Cell Line RNA

text: Homo sapiens

text: Homo sapiens


text: Cancer Research UK Cambridge Institute

text: public

text: human

text: TOV-2929 D Cell Line RNA

text: Homo sapiens

text: Homo sapiens


E-MTAB-12671:Sample 1

text: public

text: E-MTAB-12671:Sample 1

tag: Namespace:Experimental Research Laboratory  Heart and Vascular Center, Semmelweis University

text: 5 to 6

unit: week

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: Protocols: The animals were euthanized by exsanguination. Than, to remove the residual blood cells from myocardial tissue, in situ perfusion with cold physiological saline was applied. After perfusion, the hearts and the lungs of the animals were removed from the thorax and their weights were quickly measured on a scale. This was followed by conservation of left ventricular myocardial tissue. Accordingly, the apex of the left ventricle was cut into small pieces (40-50mg) and subsequently snap frozen in liquid nitrogen. RNA isolation was performed from 40-50mg of left ventricular myocardial tissue using the RNeasy Plus Universal kit (Qiagen, Hilden, Germany) according to the manufacturer’s instructions paying special attention to appendix D in order to ensure purification of total RNA including small RNAs. Isolated RNA was subsequently eluted in 30 µl RNase-free water. RNA quality and concentration were determined and reviewed using a NanoDrop® spectrophotometer (Thermo Scientific™, Waltham, MA, USA) to measure the concentration and optical density (OD) 260/280 values of the samples and an Agilent RNA TapeStation® (Agilent Technologies, Santa Clara, USA) to check RNA quality via RINe number. RINe >5 were accepted as input for library preparation. Quantification was performed via absorbance measurements using Qubit RNA broad range (BR) Assay Kit (Thermo Scientific™, Waltham, MA, USA). Library preparation was done using the QIAseq® miRNA Library Kit (Qiagen, Hilden, Germany) following the manufacturer’s instructions. A total of 500ng of RNA per sample was converted into miRNA next generation sequencing (NGS) libraries. Primers containing UMIs were used during reverse transcription. The resulting cDNA was amplified using PCR (13 cycles) with universal forward and sample index assigning reverse primers. The PCR product was then purified. Quality control of the library preparation was done by capillary electrophoresis using the High Sensitivity Tape D1000 (Agilent Technologies, Santa Clara, USA).

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

characteristic: individual

text: Rattus norvegicus

text: Rattus norvegicus

text: heart left ventricle

characteristic: organism part

text: Rattus norvegicus

text: male

characteristic: sex

text: Sprague-Dawley

characteristic: strain

text: Sample 1


E-MTAB-12671:Sample 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Experimental Research Laboratory Heart and Vascular Center, Semmelweis University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-12671:Sample 2

text: 5 to 6

text: ArrayExpress

text: Norway rat

text: adult

text: normal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: heart left ventricle

text: Rattus norvegicus

text: male

text: Sprague-Dawley

text: Sample 2


E-MTAB-12671:Sample 3

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12671:Sample 3

characteristic: Submitter Id

text: 5 to 6

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: adult

text: normal

text: wild type genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: heart left ventricle

text: Rattus norvegicus

text: male

text: Sprague-Dawley

text: Sample 3

characteristic: title


E-MTAB-12671:Sample 4

text: public

text: E-MTAB-12671:Sample 4

text: 5 to 6

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

characteristic: individual

text: Rattus norvegicus

text: Rattus norvegicus

text: heart left ventricle

characteristic: organism part

text: Rattus norvegicus

text: male

text: Sprague-Dawley

text: Sample 4


E-MTAB-12671:Sample 5

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-12671:Sample 5

text: 5 to 6

text: ArrayExpress

text: Norway rat

text: adult

text: normal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: heart left ventricle

text: Rattus norvegicus

text: male

characteristic: sex

text: Sprague-Dawley

characteristic: strain

text: Sample 5


E-MTAB-12671:Sample 6

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12671:Sample 6

characteristic: Submitter Id

text: 5 to 6

text: ArrayExpress

text: Norway rat

characteristic: common name

characteristic: description

text: adult

text: normal

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: heart left ventricle

text: Rattus norvegicus

text: male

text: Sprague-Dawley

text: Sample 6


E-MTAB-12671:Sample 7

text: public

text: E-MTAB-12671:Sample 7

text: 5 to 6

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: heart left ventricle

text: Rattus norvegicus

text: male

text: Sprague-Dawley

text: Sample 7

characteristic: title


E-MTAB-12671:Sample 8

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-12671:Sample 8

text: 5 to 6

text: ArrayExpress

text: Norway rat

text: adult

text: normal

text: wild type genotype

characteristic: individual

text: Rattus norvegicus

text: Rattus norvegicus

text: heart left ventricle

characteristic: organism part

text: Rattus norvegicus

text: male

text: Sprague-Dawley

text: Sample 8


E-MTAB-12671:Sample 17

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12671:Sample 17

characteristic: Submitter Id

text: 5 to 6

text: ArrayExpress

text: Norway rat

text: adult

text: heart failure

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: heart left ventricle

text: Rattus norvegicus

text: male

characteristic: sex

text: Sprague-Dawley

characteristic: strain

text: Sample 17


E-MTAB-12671:Sample 18

text: public

text: E-MTAB-12671:Sample 18

text: 5 to 6

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: heart failure

characteristic: disease

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: heart left ventricle

text: Rattus norvegicus

text: male

text: Sprague-Dawley

text: Sample 18


E-MTAB-12671:Sample 19

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-12671:Sample 19

text: 5 to 6

text: ArrayExpress

text: Norway rat

text: adult

text: heart failure

text: wild type genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: heart left ventricle

text: Rattus norvegicus

text: male

text: Sprague-Dawley

text: Sample 19

characteristic: title


E-MTAB-12671:Sample 20

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12671:Sample 20

characteristic: Submitter Id

text: 5 to 6

text: ArrayExpress

text: Norway rat

text: adult

text: heart failure

text: wild type genotype

characteristic: individual

text: Rattus norvegicus

text: Rattus norvegicus

text: heart left ventricle

characteristic: organism part

text: Rattus norvegicus

text: male

text: Sprague-Dawley

text: Sample 20


E-MTAB-12671:Sample 21

text: public

text: E-MTAB-12671:Sample 21

text: 5 to 6

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: heart failure

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: heart left ventricle

text: Rattus norvegicus

text: male

characteristic: sex

text: Sprague-Dawley

characteristic: strain

text: Sample 21


E-MTAB-12671:Sample 22

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-12671:Sample 22

text: 5 to 6

text: ArrayExpress

text: Norway rat

text: adult

text: heart failure

characteristic: disease

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: heart left ventricle

text: Rattus norvegicus

text: male

text: Sprague-Dawley

text: Sample 22


E-MTAB-12671:Sample 10

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12671:Sample 10

characteristic: Submitter Id

text: 5 to 6

text: ArrayExpress

text: Norway rat

text: adult

text: hypertophy

text: wild type genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: heart left ventricle

text: Rattus norvegicus

text: male

text: Sprague-Dawley

text: Sample 10

characteristic: title


E-MTAB-12671:Sample 11

text: public

text: E-MTAB-12671:Sample 11

text: 5 to 6

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: hypertophy

text: wild type genotype

characteristic: individual

text: Rattus norvegicus

text: Rattus norvegicus

text: heart left ventricle

characteristic: organism part

text: Rattus norvegicus

text: male

text: Sprague-Dawley

text: Sample 11


E-MTAB-12671:Sample 12

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-12671:Sample 12

text: 5 to 6

text: ArrayExpress

text: Norway rat

text: adult

text: hypertophy

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: heart left ventricle

text: Rattus norvegicus

text: male

characteristic: sex

text: Sprague-Dawley

characteristic: strain

text: Sample 12


E-MTAB-12671:Sample 13

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12671:Sample 13

characteristic: Submitter Id

text: 5 to 6

text: ArrayExpress

text: Norway rat

text: adult

text: hypertophy

characteristic: disease

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: heart left ventricle

text: Rattus norvegicus

text: male

text: Sprague-Dawley

text: Sample 13


E-MTAB-12671:Sample 14

text: public

text: E-MTAB-12671:Sample 14

text: 5 to 6

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: hypertophy

text: wild type genotype

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: heart left ventricle

text: Rattus norvegicus

text: male

text: Sprague-Dawley

text: Sample 14

characteristic: title


E-MTAB-12671:Sample 15

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-12671:Sample 15

text: 5 to 6

text: ArrayExpress

text: Norway rat

text: adult

text: hypertophy

text: wild type genotype

characteristic: individual

text: Rattus norvegicus

text: Rattus norvegicus

text: heart left ventricle

characteristic: organism part

text: Rattus norvegicus

text: male

text: Sprague-Dawley

text: Sample 15


E-MTAB-12671:Sample 16

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12671:Sample 16

characteristic: Submitter Id

text: 5 to 6

text: ArrayExpress

text: Norway rat

text: adult

text: hypertophy

text: wild type genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: heart left ventricle

text: Rattus norvegicus

text: male

characteristic: sex

text: Sprague-Dawley

characteristic: strain

text: Sample 16


E-MTAB-12671:Sample 9

text: public

text: E-MTAB-12671:Sample 9

text: 5 to 6

characteristic: age

text: ArrayExpress

characteristic: broker name

text: Norway rat

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: hypertophy

characteristic: disease

text: wild type genotype

characteristic: genotype

text: Rattus norvegicus

text: Rattus norvegicus

text: heart left ventricle

text: Rattus norvegicus

text: male

text: Sprague-Dawley

text: Sample 9


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

tag: Namespace:MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

characteristic: broad-scale environmental context

characteristic: collection date

unit: m

characteristic: depth

text: Assembly

characteristic: environmental medium

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: local environmental context

text: marine metagenome

characteristic: organism

characteristic: project name

text: marine metagenome

text: Illumina HiSeq 2500

characteristic: sequencing method

characteristic: title


text: IZSLER

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Whole Genome sequencing of Pseudomonas aeruginosa isolate belonging to ST1184

characteristic: description

text: Italy

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: blood

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: THE JACKSON LABORATORY

characteristic: INSDC center name

text: public

text: Instrument

characteristic: Instrument

tag: Namespace:THE JACKSON LABORATORY

text: human

characteristic: common name

text: GENOMIC

text: WGS

text: Homo sapiens

text: Homo sapiens


text: THE JACKSON LABORATORY

characteristic: INSDC first public

text: public

text: Instrument

text: human

text: GM19331_GM19331_-_Molecule_Merge_RawMolecules.bnx

text: GENOMIC

text: WGS

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: title


text: WenxinXue

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: two-spotted spider mite

text: Tetranychus iso-female adult

text: Tetranychus urticae

text: Tetranychus urticae

text: Tetranychus sample 1


text: WenxinXue

text: public

characteristic: Submitter Id

text: two-spotted spider mite

text: Tetranychus iso-female adult

characteristic: description

text: Tetranychus urticae

text: Tetranychus urticae

text: Tetranychus sample 2


text: WenxinXue

text: public

text: two-spotted spider mite

text: Tetranychus iso-female adult

text: Tetranychus urticae

text: Tetranychus urticae

text: Tetranychus sample 3


text: WenxinXue

text: public

text: two-spotted spider mite

text: Tetranychus iso-female adult

text: Tetranychus urticae

text: Tetranychus urticae

text: Tetranychus sample 4


text: WenxinXue

text: public

text: two-spotted spider mite

text: Tetranychus iso-female adult

text: Tetranychus urticae

text: Tetranychus urticae

text: Tetranychus sample 5


text: WenxinXue

text: public

text: two-spotted spider mite

text: Tetranychus iso-female adult

text: Tetranychus urticae

text: Tetranychus urticae

text: Tetranychus sample 6


text: WenxinXue

text: public

text: two-spotted spider mite

text: Tetranychus iso-female adult

text: Tetranychus urticae

text: Tetranychus urticae

text: Tetranychus sample 7


text: WenxinXue

text: public

text: two-spotted spider mite

text: Tetranychus iso-female adult

text: Tetranychus urticae

text: Tetranychus urticae

text: Tetranychus sample 8


text: WenxinXue

text: public

text: two-spotted spider mite

text: Tetranychus iso-female adult

text: Tetranychus urticae

text: Tetranychus urticae

text: Tetranychus sample 9


text: WenxinXue

text: public

text: two-spotted spider mite

text: Tetranychus iso-female adult

text: Tetranychus urticae

text: Tetranychus urticae

text: Tetranychus sample 10


text: WenxinXue

text: public

text: two-spotted spider mite

text: Tetranychus iso-female adult

text: Tetranychus urticae

text: Tetranychus urticae

text: Tetranychus sample 11


ET-Rainbow

text: WenxinXue

text: public

text: ET-Rainbow

text: two-spotted spider mite

text: Tetranychus iso-female adult

text: Tetranychus urticae

text: Tetranychus urticae

text: Tetranychus sample 12


text: WenxinXue

text: public

text: two-spotted spider mite

text: Tetranychus iso-female adult

text: Tetranychus urticae

text: Tetranychus urticae

text: Tetranychus sample 13


text: WenxinXue

text: public

text: two-spotted spider mite

text: Tetranychus iso-female adult

text: Tetranychus urticae

text: Tetranychus urticae

text: Tetranychus sample 14


FRA-A

text: WenxinXue

text: public

text: FRA-A

text: two-spotted spider mite

text: Tetranychus iso-female adult

text: Tetranychus urticae

text: Tetranychus urticae

text: Tetranychus sample 15


text: WenxinXue

text: public

text: two-spotted spider mite

text: Tetranychus iso-female adult

text: Tetranychus urticae

text: Tetranychus urticae

text: Tetranychus sample 16


text: WenxinXue

text: public

text: two-spotted spider mite

text: Tetranychus iso-female adult

text: Tetranychus urticae

text: Tetranychus urticae

text: Tetranychus sample 17


GR-Triz

text: WenxinXue

text: public

text: GR-Triz

text: two-spotted spider mite

text: Tetranychus iso-female adult

text: Tetranychus urticae

text: Tetranychus urticae

text: Tetranychus sample 18


text: WenxinXue

text: public

text: two-spotted spider mite

text: Tetranychus iso-female adult

text: Tetranychus urticae

text: Tetranychus urticae

text: Tetranychus sample 19


text: WenxinXue

text: public

text: two-spotted spider mite

text: Tetranychus iso-female adult

text: Tetranychus urticae

text: Tetranychus urticae

text: Tetranychus sample 20


text: WenxinXue

text: public

text: two-spotted spider mite

text: Tetranychus iso-female adult

text: Tetranychus urticae

text: Tetranychus urticae

text: Tetranychus sample 21


text: WenxinXue

text: public

text: two-spotted spider mite

text: Tetranychus iso-female adult

text: Tetranychus urticae

text: Tetranychus urticae

text: Tetranychus sample 22


text: WenxinXue

text: public

text: two-spotted spider mite

text: Tetranychus iso-female adult

text: Tetranychus urticae

text: Tetranychus urticae

text: Tetranychus sample 23


text: WenxinXue

text: public

text: strawberry mite

text: Tetranychus iso-female adult

text: Tetranychus turkestani

text: Tetranychus turkestani

text: Tetranychus sample 24


text: THE JACKSON LABORATORY

text: public

text: Instrument

text: human

text: JAX_HiFi_HG01457_m64119_210701_004527.bam

text: size fractionation

text: GENOMIC

text: WGS

text: Homo sapiens

text: Homo sapiens


text: THE JACKSON LABORATORY

text: public

text: Instrument

text: human

text: JAX_HiFi_HG01457_m64119_210710_045611.bam

text: size fractionation

text: GENOMIC

text: WGS

text: Homo sapiens

text: Homo sapiens


text: THE JACKSON LABORATORY

text: public

text: Instrument

text: human

text: JAX_HiFi_HG01457_m64119_211210_191732.bam

text: size fractionation

text: GENOMIC

text: WGS

text: Homo sapiens

text: Homo sapiens


text: THE JACKSON LABORATORY

text: public

text: Instrument

text: human

text: JAX_HiFi_HG01457_m64039_211217_233816.bam

text: size fractionation

text: GENOMIC

text: WGS

text: Homo sapiens

text: Homo sapiens


text: THE JACKSON LABORATORY

text: public

text: Instrument

text: human

text: JAX_HiFi_HG01457_m64039_210627_040723.bam

text: size fractionation

text: GENOMIC

text: WGS

text: Homo sapiens

text: Homo sapiens


E-MTAB-12741:1248 + ET1 - 2

text: UNIVERSITY OF EASTERN FINLAND

text: public

text: E-MTAB-12741:1248 + ET1 - 2

tag: Namespace:UNIVERSITY OF EASTERN FINLAND

text: ArrayExpress

characteristic: broker name

text: cardiac muscle cell

text: house mouse

text: Protocols: Samples of bulk RNA from cell cultures were collected from primary cell cultures of neonatal mouse ventricular cardiomyocytes by addition of the Macherey-Nagel Nucleospin lysis buffer prior to RNA isolation. Neonatal mouse hearts were removed from pups, and right and left neonatal mouse ventricles were separated from the atria using a scalpel and scissors in cold PBS. Following dissociation, isolated ventricular cardiomyocytes were cultured prior to experiments. Primary neonatal mouse ventricular cardiomyocytes (NMVCMs) were isolated using the neonatal heart dissociation kit (Miltentyi) and neonatal cardiomyocyte isolation kit (Milentyi) and plated to 12-well plates (200k cells/well). Cardiomyocytes were cultured for 24 hours in DMEM/F12 supplemented with 2.5 mg/mL bovine serum albumin, insulin-transferrin-selenium, sodium pyruvate, pen-strep, and T3 prior to ET-1 (Sigma) treatment and/or compound addition. Individual replicates represent different isolation batches, and cells were not cryopreserved at any stage prior to experiments. The test compound was diluted in DMSO, and 0.1% DMSO was used as control. DMSO or test compound 3i-1248 was added to cells at 1µM for 24 hours prior to sample collection. RNA isolation was performed using the Macherey-Nagel Nucleospin kit with on-column DNAse treatment. Library construction was performed based on multiplexing with Drop-Seq, using indexing oligonucleotides to multiplex samples, followed by cDNA synthesis and PCR amplification. PCR amplicons were tagged and libraries prepared using Illumina reagents.

text: neonate

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: cardiac ventricle

characteristic: organism part

text: Mus musculus

text: 1248 + ET1 - 2


E-MTAB-12741:1248 + ET1 - 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF EASTERN FINLAND

text: public

text: E-MTAB-12741:1248 + ET1 - 3

text: ArrayExpress

text: cardiac muscle cell

text: house mouse

text: neonate

text: normal

text: wild type genotype

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: cardiac ventricle

text: Mus musculus

text: 1248 + ET1 - 3


E-MTAB-12741:1248 + ET1 - 4

text: UNIVERSITY OF EASTERN FINLAND

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-12741:1248 + ET1 - 4

text: ArrayExpress

text: cardiac muscle cell

text: house mouse

characteristic: common name

text: neonate

text: normal

text: wild type genotype

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: cardiac ventricle

text: Mus musculus

text: 1248 + ET1 - 4


E-MTAB-12741:1248 + ET1 -1

text: UNIVERSITY OF EASTERN FINLAND

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12741:1248 + ET1 -1

text: ArrayExpress

text: cardiac muscle cell

text: house mouse

text: neonate

text: normal

text: wild type genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: cardiac ventricle

text: Mus musculus

text: 1248 + ET1 -1

characteristic: title


E-MTAB-12741:1248 - 1

text: UNIVERSITY OF EASTERN FINLAND

text: public

text: E-MTAB-12741:1248 - 1

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: cardiac muscle cell

text: house mouse

characteristic: description

text: neonate

characteristic: developmental stage

text: normal

text: wild type genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: cardiac ventricle

text: Mus musculus

text: 1248 - 1


E-MTAB-12741:1248 - 2

characteristic: ENA-CHECKLIST

text: UNIVERSITY OF EASTERN FINLAND

text: public

text: E-MTAB-12741:1248 - 2

text: ArrayExpress

text: cardiac muscle cell

text: house mouse

text: neonate

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: cardiac ventricle

characteristic: organism part

text: Mus musculus

text: 1248 - 2


E-MTAB-12741:1248 - 3

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF EASTERN FINLAND

text: public

text: E-MTAB-12741:1248 - 3

text: ArrayExpress

text: cardiac muscle cell

text: house mouse

text: neonate

text: normal

text: wild type genotype

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: cardiac ventricle

text: Mus musculus

text: 1248 - 3


E-MTAB-12741:1248 - 4

text: UNIVERSITY OF EASTERN FINLAND

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-12741:1248 - 4

text: ArrayExpress

text: cardiac muscle cell

text: house mouse

characteristic: common name

text: neonate

text: normal

text: wild type genotype

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: cardiac ventricle

text: Mus musculus

text: 1248 - 4


E-MTAB-12741:DMSO + ET1 - 1

text: UNIVERSITY OF EASTERN FINLAND

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12741:DMSO + ET1 - 1

text: ArrayExpress

text: cardiac muscle cell

text: house mouse

text: neonate

text: normal

text: wild type genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: cardiac ventricle

text: Mus musculus

text: DMSO + ET1 - 1

characteristic: title


E-MTAB-12741:DMSO + ET1 - 2

text: UNIVERSITY OF EASTERN FINLAND

text: public

text: E-MTAB-12741:DMSO + ET1 - 2

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: cardiac muscle cell

text: house mouse

characteristic: description

text: neonate

characteristic: developmental stage

text: normal

text: wild type genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: cardiac ventricle

text: Mus musculus

text: DMSO + ET1 - 2


E-MTAB-12741:DMSO + ET1 - 3

characteristic: ENA-CHECKLIST

text: UNIVERSITY OF EASTERN FINLAND

text: public

text: E-MTAB-12741:DMSO + ET1 - 3

text: ArrayExpress

text: cardiac muscle cell

text: house mouse

text: neonate

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: cardiac ventricle

characteristic: organism part

text: Mus musculus

text: DMSO + ET1 - 3


E-MTAB-12741:DMSO + ET1 - 4

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF EASTERN FINLAND

text: public

text: E-MTAB-12741:DMSO + ET1 - 4

text: ArrayExpress

text: cardiac muscle cell

text: house mouse

text: neonate

text: normal

text: wild type genotype

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: cardiac ventricle

text: Mus musculus

text: DMSO + ET1 - 4


E-MTAB-12741:DMSO - 1

text: UNIVERSITY OF EASTERN FINLAND

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-12741:DMSO - 1

text: ArrayExpress

text: cardiac muscle cell

text: house mouse

characteristic: common name

text: neonate

text: normal

text: wild type genotype

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: cardiac ventricle

text: Mus musculus

text: DMSO - 1


E-MTAB-12741:DMSO - 2

text: UNIVERSITY OF EASTERN FINLAND

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12741:DMSO - 2

text: ArrayExpress

text: cardiac muscle cell

text: house mouse

text: neonate

text: normal

text: wild type genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: cardiac ventricle

text: Mus musculus

text: DMSO - 2

characteristic: title


E-MTAB-12741:DMSO - 3

text: UNIVERSITY OF EASTERN FINLAND

text: public

text: E-MTAB-12741:DMSO - 3

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: cardiac muscle cell

text: house mouse

characteristic: description

text: neonate

characteristic: developmental stage

text: normal

text: wild type genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: cardiac ventricle

text: Mus musculus

text: DMSO - 3


E-MTAB-12741:DMSO - 4

characteristic: ENA-CHECKLIST

text: UNIVERSITY OF EASTERN FINLAND

text: public

text: E-MTAB-12741:DMSO - 4

text: ArrayExpress

text: cardiac muscle cell

text: house mouse

text: neonate

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: cardiac ventricle

characteristic: organism part

text: Mus musculus

text: DMSO - 4


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_5382

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Brettanomyces bruxellensis, isolate YJS_5397

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

characteristic: INSDC last update

text: public

text: Brettanomyces bruxellensis, isolate YJS_5400

text: Brettanomyces bruxellensis

characteristic: organism

text: Brettanomyces bruxellensis


text: UDS

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Brettanomyces bruxellensis, isolate YJS_5408wri

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

characteristic: Submitter Id

text: Brettanomyces bruxellensis, isolate YJS_5454

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis

characteristic: title


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7800

characteristic: description

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7801

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7802

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7803

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7804

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7806

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7807

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7809

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7810

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7811

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7813

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7814

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7815

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7816

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7817

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7818

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7829

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7831

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7847

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7848

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7853

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7856

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7861

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7862

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7870

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7874

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7879

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7882

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7883

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7887

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7889

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7890

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7891

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7892

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7895

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7905

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7907

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7909

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7911

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7913

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7914

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7920

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7926

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7929

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7932

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7934

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7938

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7940

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7945

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7946

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7947

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7949

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7950

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7953

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7954

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7957

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7961

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7967

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7979

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_7990

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8003

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8011

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8014

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8020

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8039

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8048

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8051

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8052

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8057

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8058

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8060

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8061

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8062

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8068

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8070

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8074

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8077

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8080

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8081

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8082

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8087

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8088

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8090

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: UDS

text: public

text: Brettanomyces bruxellensis, isolate YJS_8092

text: Brettanomyces bruxellensis

text: Brettanomyces bruxellensis


text: The Francis Crick Institute

text: public

tag: Namespace:The Francis Crick Institute

text: house mouse

characteristic: common name

text: EGFRm + Air Pollution 1

text: Mus musculus

text: Mus musculus


characteristic: ENA-CHECKLIST

text: The Francis Crick Institute

text: public

text: house mouse

text: EGFRm + Air Pollution 2

text: Mus musculus

text: Mus musculus


text: The Francis Crick Institute

text: public

text: house mouse

text: EGFRm + Air Pollution 3

text: Mus musculus

text: Mus musculus


text: The Francis Crick Institute

text: public

text: house mouse

text: EGFRm + Air Pollution 4

text: Mus musculus

text: Mus musculus


text: The Francis Crick Institute

text: public

text: house mouse

text: EGFRm + Air Pollution 5

text: Mus musculus

text: Mus musculus


text: The Francis Crick Institute

text: public

text: house mouse

text: EGFRm + Control 1

text: Mus musculus

text: Mus musculus


text: The Francis Crick Institute

text: public

text: house mouse

text: EGFRm + Control 2

text: Mus musculus

text: Mus musculus


text: The Francis Crick Institute

text: public

text: house mouse

text: EGFRm + Control 3

text: Mus musculus

text: Mus musculus


text: The Francis Crick Institute

text: public

text: house mouse

text: EGFRm + Control 4

text: Mus musculus

text: Mus musculus


text: The Francis Crick Institute

text: public

text: house mouse

text: EGFRm + Control 5

text: Mus musculus

text: Mus musculus


text: The Francis Crick Institute

text: public

text: house mouse

text: Tomato + Air Pollution 1

text: Mus musculus

text: Mus musculus


text: The Francis Crick Institute

text: public

text: house mouse

text: Tomato + Air Pollution 2

text: Mus musculus

text: Mus musculus


text: The Francis Crick Institute

text: public

text: house mouse

text: Tomato + Air Pollution 3

text: Mus musculus

text: Mus musculus


text: The Francis Crick Institute

text: public

text: house mouse

text: Tomato + Air Pollution 4

text: Mus musculus

text: Mus musculus


text: The Francis Crick Institute

text: public

text: house mouse

text: Tomato + Air Pollution 5

text: Mus musculus

text: Mus musculus


text: The Francis Crick Institute

text: public

text: house mouse

text: Tomato + Control 1

text: Mus musculus

text: Mus musculus


text: The Francis Crick Institute

text: public

text: house mouse

text: Tomato + Control 2

text: Mus musculus

text: Mus musculus


text: The Francis Crick Institute

text: public

text: house mouse

text: Tomato + Control 3

text: Mus musculus

text: Mus musculus


text: The Francis Crick Institute

text: public

text: house mouse

text: Tomato + Control 4

text: Mus musculus

text: Mus musculus


text: The Francis Crick Institute

text: public

text: house mouse

text: Tomato + Control 5

text: Mus musculus

text: Mus musculus


text: THE JACKSON LABORATORY

text: public

text: Instrument

characteristic: Instrument

text: human

text: NA19331_20210630_Lee_m64119_210623_162508.hifi.bam

text: PolyA

text: TRANSCRIPTOMIC

text: RNA-Seq

text: Homo sapiens

text: Homo sapiens


text: THE JACKSON LABORATORY

text: public

text: Instrument

text: human

text: NA19317_20210630_Lee_m64119_210625_164835.hifi.bam

text: PolyA

text: TRANSCRIPTOMIC

text: RNA-Seq

text: Homo sapiens

text: Homo sapiens


text: THE JACKSON LABORATORY

text: public

text: Instrument

text: human

text: HG02666_20210630_Lee_m64119_210624_163647.hifi.bam

text: PolyA

text: TRANSCRIPTOMIC

text: RNA-Seq

text: Homo sapiens

text: Homo sapiens


text: THE JACKSON LABORATORY

text: public

text: Instrument

text: human

text: NA19347_20210630_Lee_m64119_210626_170023.hifi.bam

text: PolyA

text: TRANSCRIPTOMIC

text: RNA-Seq

text: Homo sapiens

text: Homo sapiens


text: THE JACKSON LABORATORY

text: public

text: Instrument

text: human

text: NA18989_20210630_Lee_m64119_210622_161306.hifi.bam

text: PolyA

text: TRANSCRIPTOMIC

text: RNA-Seq

text: Homo sapiens

text: Homo sapiens


text: THE JACKSON LABORATORY

text: public

text: Instrument

text: human

text: NA19384_20210706_Lee_m64039_210701_174442.hifi.bam

text: PolyA

text: TRANSCRIPTOMIC

text: RNA-Seq

text: Homo sapiens

text: Homo sapiens


text: THE JACKSON LABORATORY

text: public

text: Instrument

text: human

text: HG03248_20210706_Lee_m64039_210629_171958.hifi.bam

text: PolyA

text: TRANSCRIPTOMIC

text: RNA-Seq

text: Homo sapiens

text: Homo sapiens


text: THE JACKSON LABORATORY

text: public

text: Instrument

text: human

text: HG01457_20210706_Lee_m64039_210630_173216.hifi.bam

text: PolyA

text: TRANSCRIPTOMIC

text: RNA-Seq

text: Homo sapiens

text: Homo sapiens


text: UNIVERSITY OF BRISTOL

text: public

tag: Namespace:UNIVERSITY OF BRISTOL

text: polar environment

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: 16S rRNA gene amplicon sequencing of Antarctic soil

characteristic: elevation

text: soil

characteristic: environmental medium

text: Antarctica

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: New Harbour

characteristic: local environmental context

text: soil metagenome

text: Antarctic microbial communities from New Harbour area (Lower Taylor Valley, McMurdo Dry Valleys, East Antarctica)

characteristic: project name

text: soil metagenome

text: Illumina MiSeq

characteristic: sequencing method


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF BRISTOL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: polar environment

text: soil

text: Antarctica

text: New Harbour

text: soil metagenome

characteristic: organism

text: Antarctic microbial communities from Prince Charles Mountains and East Antarctic Coast

text: soil metagenome

text: Illumina MiSeq


characteristic: ENA-CHECKLIST

text: Institut Jacques Monod

text: public

tag: Namespace:Institut Jacques Monod

text: Dumeril's clam worm

characteristic: common name

text: Blastema from 2 days post amputation of the posterior part of Platynereis dumerilii, replicate number 1.

characteristic: description

text: Platynereis dumerilii

text: Platynereis dumerilii

text: Blastema 2dpa rep1

characteristic: title


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Blastema from 2 days post amputation of the posterior part of Platynereis dumerilii, replicate number 2.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: Blastema 2dpa rep2


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Blastema from 2 days post amputation of the posterior part of Platynereis dumerilii, replicate number 3.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: Blastema 2dpa rep3


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Blastema from 3 days post amputation of the posterior part of Platynereis dumerilii, replicate number 1.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: Blastema 3dpa rep1


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Blastema from 3 days post amputation of the posterior part of Platynereis dumerilii, replicate number 2.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: Blastema 3dpa rep2


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Blastema from 3 days post amputation of the posterior part of Platynereis dumerilii, replicate number 3.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: Blastema 3dpa rep3


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Blastema from 3 days post amputation of the posterior part of Platynereis dumerilii for long read sequencing.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: Blastema long read


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Posterior part of Platynereis dumerilii for long read sequencing.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: Posterior part long read


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Non amputated posterior part from Platynereis dumerilii, replicate number 1.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: Non Amputated rep1


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Non amputated posterior part from Platynereis dumerilii, replicate number 2.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: Non Amputated rep2


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Non amputated posterior part from Platynereis dumerilii, replicate number 3.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: Non Amputated rep3


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Posterior part from Platynereis dumerilii 0 days post amputation, replicate number 1.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: 0dpa of posterior part rep1


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Posterior part from Platynereis dumerilii 0 days post amputation, replicate number 2.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: 0dpa of posterior part rep2


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Posterior part from Platynereis dumerilii 0 days post amputation, replicate number 3.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: 0dpa of posterior part rep3


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Posterior part from Platynereis dumerilii 1 days post amputation, replicate number 1.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: 1dpa of posterior part rep1


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Posterior part from Platynereis dumerilii 1 days post amputation, replicate number 2.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: 1dpa of posterior part rep2


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Posterior part from Platynereis dumerilii 1 days post amputation, replicate number 3.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: 1dpa of posterior part rep3


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Posterior part from Platynereis dumerilii 2 days post amputation, replicate number 1.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: 2dpa of posterior part rep1


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Posterior part from Platynereis dumerilii 2 days post amputation, replicate number 2.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: 2dpa of posterior part rep2


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Posterior part from Platynereis dumerilii 2 days post amputation, replicate number 3.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: 2dpa of posterior part rep3


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Posterior part from Platynereis dumerilii 3 days post amputation, replicate number 1.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: 3dpa of posterior part rep1


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Posterior part from Platynereis dumerilii 3 days post amputation, replicate number 2.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: 3dpa of posterior part rep2


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Posterior part from Platynereis dumerilii 3 days post amputation, replicate number 3.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: 3dpa of posterior part rep3


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Posterior part from Platynereis dumerilii 5 days post amputation, replicate number 1.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: 5dpa of posterior part rep1


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Posterior part from Platynereis dumerilii 5 days post amputation, replicate number 2.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: 5dpa of posterior part rep2


text: Institut Jacques Monod

text: public

text: Dumeril's clam worm

text: Posterior part from Platynereis dumerilii 5 days post amputation, replicate number 3.

text: Platynereis dumerilii

text: Platynereis dumerilii

text: 5dpa of posterior part rep3


2739 Hanseniaspora uvarum

text: Quadram Institute Bioscience

text: public

text: 2739 Hanseniaspora uvarum

tag: Namespace:Quadram Institute Bioscience

text: Quadram Institute Bioscience

characteristic: broker name

text: NCYC 2739 Hanseniaspora uvarum

text: Hanseniaspora uvarum

text: Hanseniaspora uvarum

text: NCYC 2739 Hanseniaspora uvarum


2878 Kazachstania barnettii

text: Quadram Institute Bioscience

text: public

text: 2878 Kazachstania barnettii

text: Quadram Institute Bioscience

text: NCYC 2878 Kazachstania barnettii

text: Kazachstania barnettii

text: Kazachstania barnettii

text: NCYC 2878 Kazachstania barnettii


2577 Kazachstania servazzii

text: Quadram Institute Bioscience

text: public

text: 2577 Kazachstania servazzii

text: Quadram Institute Bioscience

text: NCYC 2577 Kazachstania servazzii

text: Kazachstania servazzii

text: Kazachstania servazzii

text: NCYC 2577 Kazachstania servazzii


2991 Kazachstania spencerorum

text: Quadram Institute Bioscience

text: public

text: 2991 Kazachstania spencerorum

text: Quadram Institute Bioscience

text: NCYC 2991 Kazachstania spencerorum

text: Kazachstania spencerorum

text: Kazachstania spencerorum

text: NCYC 2991 Kazachstania spencerorum


2795 Cyberlindnera fabianii

text: Quadram Institute Bioscience

text: public

text: 2795 Cyberlindnera fabianii

text: Quadram Institute Bioscience

text: NCYC 2795 Cyberlindnera fabianii

text: Cyberlindnera fabianii

text: Cyberlindnera fabianii

text: NCYC 2795 Cyberlindnera fabianii


2480 Metschnikowia agaves

text: Quadram Institute Bioscience

text: public

text: 2480 Metschnikowia agaves

text: Quadram Institute Bioscience

text: NCYC 2480 Metschnikowia agaves

text: Metschnikowia agaves

text: Metschnikowia agaves

text: NCYC 2480 Metschnikowia agaves


2578 Saccharomyces bayanus

text: Quadram Institute Bioscience

text: public

text: 2578 Saccharomyces bayanus

text: Quadram Institute Bioscience

text: NCYC 2578 Saccharomyces bayanus

text: Saccharomyces bayanus

text: Saccharomyces bayanus

text: NCYC 2578 Saccharomyces bayanus


1493 Wickerhamomyces alni

text: Quadram Institute Bioscience

text: public

text: 1493 Wickerhamomyces alni

text: Quadram Institute Bioscience

text: NCYC 1493 Wickerhamomyces alni

text: Wickerhamomyces alni

text: Wickerhamomyces alni

text: NCYC 1493 Wickerhamomyces alni


E-MTAB-12645:Sample 1

text: public

text: E-MTAB-12645:Sample 1

tag: Namespace:Microbiome and Antitumor Immunity Dpt. of Experimental Oncology European Institute of Oncology, Milan, Italy

unit: year

characteristic: age

text: ArrayExpress

text: mononuclear cell

text: house mouse

text: Protocols: Spleen and lymph nodes (inguinal and axillary) were harvested from mice under sterile conditions, mechanically dissociated into single cell suspension and red blood cells were lysed. Cells were then sorted by negative selection following the manufacturer’s instructions. After sorting, cells were resuspended at 1x106 cells/mL in complete RPMI media (10% FBS, 1% NaPy, 1% Glutamine, 1% Pen/Strep, 0,1% b-mercaptoethanol) supplemented with 100U/mL IL2. For OT1 mice, media was further complemented with 2 mg/mL of SIINFELK peptide, while for C57J/B6 mice polyclonal activation was achieved using 5 mg/mL plated-bound aCD3 and 0,5 mg/mL soluble aCD28. Cells were further treated with BSA, linoleic acid, oleic acid or arachidonic acid. OT1 cells were sorted with >95% purity as previously described, activated for 48 hours in the presence or absence of LA, counted and resuspended in RLT lysis buffer (Qiagen). RNA was isolated from purified cells using RNeasy Mini kits, and RNA concentrations were determined using Nanodrop. RNA-seq, Random sequencing of whole transcriptome.

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: mixed spleen and lymph node

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: stimulus

characteristic: strain

text: Sample 1


E-MTAB-12645:Sample 2

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Microbiome and Antitumor Immunity Dpt. of Experimental Oncology European Institute of Oncology, Milan, Italy

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12645:Sample 2

text: ArrayExpress

text: mononuclear cell

text: house mouse

text: adult

text: wild type genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: mixed spleen and lymph node

text: Mus musculus

text: male

text: 5 mg/mL plated-bound aCD3 and 0,5 mg/mL soluble aCD28

text: Sample 2


E-MTAB-12645:Sample 3

characteristic: ENA-CHECKLIST

text: public

characteristic: SRA accession

text: E-MTAB-12645:Sample 3

characteristic: Submitter Id

text: ArrayExpress

text: mononuclear cell

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: wild type genotype

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: mixed spleen and lymph node

text: Mus musculus

text: male

text: Sample 3

characteristic: title


E-MTAB-12645:Sample 4

text: public

text: E-MTAB-12645:Sample 4

characteristic: age

text: ArrayExpress

characteristic: broker name

text: mononuclear cell

text: house mouse

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: mixed spleen and lymph node

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

text: Sample 4


E-MTAB-12645:Sample 5

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-12645:Sample 5

text: ArrayExpress

text: mononuclear cell

text: house mouse

text: adult

text: wild type genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: mixed spleen and lymph node

text: Mus musculus

text: male

characteristic: stimulus

characteristic: strain

text: Sample 5


E-MTAB-12645:Sample 6

characteristic: ENA-CHECKLIST

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12645:Sample 6

characteristic: Submitter Id

text: ArrayExpress

text: mononuclear cell

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: wild type genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: mixed spleen and lymph node

text: Mus musculus

text: male

text: Sample 6


text: THE JACKSON LABORATORY

text: public

text: PromethION

characteristic: Instrument

text: human

text: 20220425_220420_21-lee-006_PC24B149_3E_guppy-5.0.11-sup-prom_fastq_pass.fastq.gz

text: size fractionation

text: GENOMIC

text: WGS

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: THE JACKSON LABORATORY

text: public

text: PromethION

text: human

text: 20210608_210526_21-lee-006_PCT0053_2-E9-H9_guppy-5.0.11-sup-prom_fastq_pass.fastq.gz

text: size fractionation

text: GENOMIC

text: WGS

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-LAST-UPDATE

text: THE JACKSON LABORATORY

text: public

text: PromethION

text: human

text: 20220307_220302_21-lee-006_PC24B149_3F_guppy-5.0.11-sup-prom_fastq_pass.fastq.gz

text: size fractionation

text: GENOMIC

text: WGS

text: Homo sapiens

text: Homo sapiens


characteristic: External Id

text: THE JACKSON LABORATORY

text: public

text: PromethION

text: human

text: 20220405_220329_21-lee-006_PC24B149_2F_guppy-5.0.11-sup-prom_fastq_pass.fastq.gz

text: size fractionation

text: GENOMIC

text: WGS

text: Homo sapiens

text: Homo sapiens


text: THE JACKSON LABORATORY

characteristic: INSDC center name

text: public

text: PromethION

text: human

text: 20220315_220308_21-lee-006_PC24B149_2F_guppy-5.0.11-sup-prom_fastq_pass.fastq.gz

text: size fractionation

text: GENOMIC

text: WGS

text: Homo sapiens

text: Homo sapiens


text: THE JACKSON LABORATORY

characteristic: INSDC first public

text: public

text: PromethION

text: human

text: 20220322_220316_21-lee-006_PC24B149_3F_guppy-5.0.11-sup-prom_fastq_pass.fastq.gz

text: size fractionation

text: GENOMIC

text: WGS

text: Homo sapiens

text: Homo sapiens


text: THE JACKSON LABORATORY

text: public

text: PromethION

text: human

text: 20220503_220427_21-lee-006_PC24B149_3F_guppy-5.0.11-sup-prom_fastq_pass.fastq.gz

text: size fractionation

text: GENOMIC

text: WGS

text: Homo sapiens

text: Homo sapiens


text: THE JACKSON LABORATORY

text: public

text: PromethION

text: human

text: 20220215_220209_21-lee-006_PC24B149_1F_guppy-5.0.11-sup-prom_fastq_pass.fastq.gz

text: size fractionation

text: GENOMIC

text: WGS

text: Homo sapiens

text: Homo sapiens


text: THE JACKSON LABORATORY

text: public

text: PromethION

text: human

text: 20220215_220209_21-lee-006_PC24B149_3F_guppy-5.0.11-sup-prom_fastq_pass.fastq.gz

text: size fractionation

text: GENOMIC

text: WGS

text: Homo sapiens

text: Homo sapiens


text: THE JACKSON LABORATORY

text: public

text: PromethION

text: human

text: 20220322_220316_21-lee-006_PC24B149_3D_guppy-5.0.11-sup-prom_fastq_pass.fastq.gz

text: size fractionation

text: GENOMIC

text: WGS

text: Homo sapiens

text: Homo sapiens


text: THE JACKSON LABORATORY

text: public

text: PromethION

text: human

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text: public

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text: Gorilla single hair

text: Gorilla gorilla gorilla

text: Gorilla gorilla gorilla

text: Hair


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text: IBE-UPF

text: public

text: eastern lowland gorilla

text: Gorilla single hair

text: Gorilla beringei graueri

text: Gorilla beringei graueri

text: Hair


text: IBE-UPF

characteristic: INSDC last update

text: public

text: Cross River gorilla

text: Gorilla single hair

text: Gorilla gorilla diehli

text: Gorilla gorilla diehli

text: Hair


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text: public

characteristic: INSDC status

text: hypersaline water environment

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characteristic: collection date

text: Brine from Es Trenc solar salterns. Campos inoculum sample

text: Brine

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text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: saline evaporation pond

characteristic: local environmental context

text: hypersaline lake metagenome

text: Brine and viral community exchange in hypersaline systems

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text: hypersaline lake metagenome

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TfA

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characteristic: ENA-LAST-UPDATE

text: AZTI

text: public

characteristic: SRA accession

text: TfA

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text: laboratory environment

text: Mesocosm end-point sample. Campos cells, Campos brine, autochthonous viruses, replicate 1

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text: mesocosm

text: hypersaline lake metagenome

characteristic: organism

text: hypersaline lake metagenome

characteristic: title


TFB

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characteristic: External Id

text: AZTI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: TFB

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text: Mesocosm end-point sample. Campos cells, Campos brine, autochthonous viruses, replicate 2

text: Brine

text: Spain

text: mesocosm

text: hypersaline lake metagenome

text: hypersaline lake metagenome


TFD

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text: public

characteristic: INSDC status

text: TFD

text: laboratory environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Mesocosm end-point sample. Campos cells, Campos brine, no viruses in brines, replicate 1

text: Brine

characteristic: environmental medium

text: Spain

characteristic: geographic location (country and/or sea)

text: mesocosm

text: hypersaline lake metagenome

text: hypersaline lake metagenome


TfF

characteristic: ENA-FIRST-PUBLIC

text: AZTI

text: public

text: TfF

text: laboratory environment

text: Mesocosm end-point sample. Campos cells, Campos brine, no viruses in brines, replicate 2

text: Brine

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm

characteristic: local environmental context

text: hypersaline lake metagenome

characteristic: project name

text: hypersaline lake metagenome


TFM

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text: AZTI

text: public

characteristic: SRA accession

text: TFM

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text: laboratory environment

text: Mesocosm end-point sample. Campos cells, Aran-Bidgol brine, allochthonous viruses, replicate 1

characteristic: description

text: Brine

text: Spain

text: mesocosm

text: hypersaline lake metagenome

characteristic: organism

text: hypersaline lake metagenome


TfO

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characteristic: External Id

text: AZTI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: TfO

text: laboratory environment

text: Mesocosm end-point sample. Campos cells, Aran-Bidgol brine, allochthonous viruses, replicate 2

text: Brine

text: Spain

text: mesocosm

text: hypersaline lake metagenome

text: hypersaline lake metagenome

characteristic: title


TFP

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characteristic: INSDC last update

text: public

characteristic: INSDC status

text: TFP

text: laboratory environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Mesocosm end-point sample. Campos cells, Aran-Bidgol brine, no viruses in brines, replicate 1

text: Brine

characteristic: environmental medium

text: Spain

text: mesocosm

text: hypersaline lake metagenome

text: hypersaline lake metagenome


TfR

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text: AZTI

text: public

text: TfR

text: laboratory environment

text: Mesocosm end-point sample. Campos cells, Aran-Bidgol brine, no viruses in brines, replicate 2

text: Brine

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm

characteristic: local environmental context

text: hypersaline lake metagenome

text: hypersaline lake metagenome


characteristic: ENA-LAST-UPDATE

text: AZTI

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: hypersaline water environment

text: Brine from Aran-Bidgol lake. Inoculum sample

characteristic: description

text: Brine

text: Iran

text: saline lake

text: hypersaline lake metagenome

characteristic: project name

text: hypersaline lake metagenome

text: AZ


TFT

characteristic: ENA-CHECKLIST

characteristic: External Id

text: AZTI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: TFT

text: laboratory environment

text: Mesocosm end-point sample. Aran-Bidgol, Aran-Bidgol, autochthonous viruses, replicate 1

text: Brine

text: Iran

text: mesocosm

text: hypersaline lake metagenome

characteristic: organism

text: hypersaline lake metagenome


TfU

text: AZTI

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: TfU

text: laboratory environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Mesocosm end-point sample. Aran-Bidgol, Aran-Bidgol, autochthonous viruses, replicate 2

text: Brine

text: Iran

text: mesocosm

text: hypersaline lake metagenome

text: hypersaline lake metagenome

characteristic: title


TFW

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text: AZTI

text: public

text: TFW

text: laboratory environment

text: Mesocosm end-point sample. Aran-Bidgol, Aran-Bidgol brine, no viruses in brines, replicate 1

text: Brine

characteristic: environmental medium

text: Iran

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm

text: hypersaline lake metagenome

text: hypersaline lake metagenome


TfX

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text: AZTI

text: public

characteristic: SRA accession

text: TfX

characteristic: Submitter Id

text: laboratory environment

text: Mesocosm end-point sample. Aran-Bidgol, Aran-Bidgol brine, no viruses in brines, replicate 2

characteristic: description

text: Brine

text: Iran

text: mesocosm

characteristic: local environmental context

text: hypersaline lake metagenome

text: hypersaline lake metagenome


TFG

characteristic: ENA-CHECKLIST

characteristic: External Id

text: AZTI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: TFG

text: laboratory environment

text: Mesocosm end-point sample. Aran-Bidgol cells, Campos brine, allochthonous viruses, replicate 1

text: Brine

text: Iran

text: mesocosm

text: hypersaline lake metagenome

characteristic: project name

text: hypersaline lake metagenome


TfI

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characteristic: INSDC last update

text: public

characteristic: INSDC status

text: TfI

text: laboratory environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Mesocosm end-point sample. Aran-Bidgol cells, Campos brine, allochthonous viruses, replicate 2

text: Brine

text: Iran

text: mesocosm

text: hypersaline lake metagenome

characteristic: organism

text: hypersaline lake metagenome


TfK

characteristic: ENA-FIRST-PUBLIC

text: AZTI

text: public

text: TfK

text: laboratory environment

text: Mesocosm end-point sample. Aran-Bidgols cells, Campos brine, no viruses in brines, replicate 1

text: Brine

characteristic: environmental medium

text: Iran

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: mesocosm

text: hypersaline lake metagenome

text: hypersaline lake metagenome

characteristic: title


TFL

characteristic: ENA-LAST-UPDATE

text: AZTI

text: public

characteristic: SRA accession

text: TFL

characteristic: Submitter Id

text: laboratory environment

text: Mesocosm end-point sample. Aran-Bidgols cells, Campos brine, no viruses in brines, replicate 2

characteristic: description

text: Brine

text: Iran

characteristic: geographic location (longitude)

text: mesocosm

text: hypersaline lake metagenome

text: Brine and viral community exchange in hypersaline systems

text: hypersaline lake metagenome


characteristic: ENA-CHECKLIST

characteristic: External Id

text: AZTI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: hypersaline water environment

text: Brine from Aran-Bidgol lake. Inoculum sample. Viral metagenome

text: Brine

text: Iran

text: saline lake

characteristic: local environmental context

text: hypersaline lake metagenome

text: hypersaline lake metagenome

text: AZV


text: Centre of Biological Engineering

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Centre of Biological Engineering

text: BLANK CONTROL M1

text: human gut metagenome

text: human gut metagenome


characteristic: ENA-FIRST-PUBLIC

text: Centre of Biological Engineering

text: public

text: BLANK CONTROL M2

text: human gut metagenome

characteristic: organism

text: human gut metagenome


text: Centre of Biological Engineering

text: public

text: BLANK CONTROL V1

text: human gut metagenome

text: human gut metagenome


text: Centre of Biological Engineering

text: public

text: BLANK CONTROL V2

text: human gut metagenome

text: human gut metagenome


text: Centre of Biological Engineering

text: public

text: EPILACTOSE M1

text: human gut metagenome

text: human gut metagenome


text: Centre of Biological Engineering

text: public

text: EPILACTOSE M2

text: human gut metagenome

text: human gut metagenome


text: Centre of Biological Engineering

text: public

text: EPILACTOSE V1

text: human gut metagenome

text: human gut metagenome


text: Centre of Biological Engineering

text: public

text: EPILACTOSE V2

text: human gut metagenome

text: human gut metagenome


text: Centre of Biological Engineering

text: public

text: LACTULOSE M1

text: human gut metagenome

text: human gut metagenome


text: Centre of Biological Engineering

text: public

text: LACTULOSE M2

text: human gut metagenome

text: human gut metagenome


text: Centre of Biological Engineering

text: public

text: LACTULOSE V1

text: human gut metagenome

text: human gut metagenome


text: Centre of Biological Engineering

text: public

text: LACTULOSE V2

text: human gut metagenome

text: human gut metagenome


text: Centre of Biological Engineering

text: public

text: INOCULUM M

text: human gut metagenome

text: human gut metagenome

text: M


text: Centre of Biological Engineering

text: public

text: RAFFINOSE M1

text: human gut metagenome

text: human gut metagenome


text: Centre of Biological Engineering

text: public

text: RAFFINOSE M2

text: human gut metagenome

text: human gut metagenome


text: Centre of Biological Engineering

text: public

text: RAFFINOSE V1

text: human gut metagenome

text: human gut metagenome


text: Centre of Biological Engineering

text: public

text: RAFFINOSE V2

text: human gut metagenome

text: human gut metagenome


text: Centre of Biological Engineering

text: public

text: INOCULUM V

text: human gut metagenome

text: human gut metagenome

text: V


text: QLD Health

text: public

tag: Namespace:QLD Health

characteristic: collection date

text: isolate

text: Australia

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: clinical

text: Corynebacterium ulcerans

text: Corynebacterium ulcerans

text: Culcerans


characteristic: ENA-LAST-UPDATE

text: QLD Health

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: isolate

text: Australia

text: diseased

text: Homo sapiens

text: C4_Dog_Sample 1

text: clinical

text: Corynebacterium ulcerans

text: Corynebacterium ulcerans

text: Culcerans

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: QLD Health

text: public

text: isolate

characteristic: description

text: Australia

text: diseased

text: Homo sapiens

text: C4_Dog_Sample 2

text: clinical

text: Corynebacterium ulcerans

text: Corynebacterium ulcerans

text: Culcerans


text: Centre de Recherche en Myologie

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:Centre de Recherche en Myologie

text: human

characteristic: common name

text: differentiated immortalized myoblasts from an unaffacted WT individual�treated with all-in-one CRISPRi-lentiviral vector expressing both a dCas9/KRAB protein and the non target guide (sgNT) number 1, first�biological replicate (N=1/4)

text: Homo sapiens

text: Homo sapiens

text: CTRL-myo-1 with non-target-guide-1


characteristic: ENA-FIRST-PUBLIC

text: Centre de Recherche en Myologie

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: human

text: differentiated immortalized myoblasts from an unaffacted WT individual�treated with all-in-one CRISPRi-lentiviral vector expressing both a dCas9/KRAB protein and the non target guide (sgNT) number 1, second�biological replicate (N=2/4)

text: Homo sapiens

text: Homo sapiens

text: CTRL-myo-2 with non-target-guide-1


text: Centre de Recherche en Myologie

text: public

text: human

text: differentiated immortalized myoblasts from an unaffacted WT individual�treated with all-in-one CRISPRi-lentiviral vector expressing both a dCas9/KRAB protein and the non target guide (sgNT) number 1, third�biological replicate (N=3/4)

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: CTRL-myo-3 with non-target-guide-1