E-MTAB-13104:Sample 27

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: KIS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13104:Sample 27

characteristic: Submitter Id

text: ArrayExpress

text: neuron

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 27


E-MTAB-13104:Sample 28

status: PUBLIC

tag: attribute

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KIS

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13104:Sample 28

text: ArrayExpress

characteristic: broker name

text: neuron

text: not collected

text: house mouse

text: Protocols: Mouse strains are C57BL/6J mice which were injected with viral particles containing pAAV-hsyn-flex-Voltron-ST to detect the PAG cells at 10-11 weeks. Mice were sacrificed 4-5 weeks after Voltron-ST expression for voltage-imaging and single cell RNA-seq using Smart-seq2. Somas were collected by aspiration with a harvesting pipette (1.8-2.5 MΩ) containing (in mM): 90 KCl, 20 MgCl2 The harvested neuron (~0.5 μl) was ejected into a 4 μl drop of Smart-seq2 lysis buffer The RNA library was constructed according to the Smart-seq2 protocol with the following changes: SS2 cDNA was amplified for 22 cycles, 1ng of cDNA was tagmented and amplified with custom 10bp indexes

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: pAAV-hsyn-flex-Voltron-ST

characteristic: genetic modification

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

characteristic: organism part

text: pass

characteristic: post analysis well quality

text: Mus musculus

characteristic: strain

text: Sample 28

characteristic: title


E-MTAB-13104:Sample 29

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: KIS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13104:Sample 29

characteristic: Submitter Id

text: ArrayExpress

text: neuron

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 29


E-MTAB-13104:Sample 3

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KIS

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13104:Sample 3

text: ArrayExpress

characteristic: broker name

text: neuron

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: pAAV-hsyn-flex-Voltron-ST

characteristic: genetic modification

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

text: fail

text: Mus musculus

text: Sample 3


E-MTAB-13104:Sample 30

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: KIS

text: public

text: E-MTAB-13104:Sample 30

text: ArrayExpress

text: neuron

text: not collected

text: house mouse

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

characteristic: organism part

text: pass

characteristic: post analysis well quality

text: Mus musculus

characteristic: strain

text: Sample 30

characteristic: title


E-MTAB-13104:Sample 31

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KIS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13104:Sample 31

characteristic: Submitter Id

text: ArrayExpress

text: neuron

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 31


E-MTAB-13104:Sample 32

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: KIS

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13104:Sample 32

text: ArrayExpress

characteristic: broker name

text: neuron

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: pAAV-hsyn-flex-Voltron-ST

characteristic: genetic modification

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 32


E-MTAB-13104:Sample 33

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KIS

text: public

text: E-MTAB-13104:Sample 33

text: ArrayExpress

text: neuron

text: not collected

text: house mouse

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

characteristic: organism part

text: pass

characteristic: post analysis well quality

text: Mus musculus

characteristic: strain

text: Sample 33

characteristic: title


E-MTAB-13104:Sample 34

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: KIS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13104:Sample 34

characteristic: Submitter Id

text: ArrayExpress

text: neuron

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 34


E-MTAB-13104:Sample 35

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KIS

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13104:Sample 35

text: ArrayExpress

characteristic: broker name

text: neuron

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: pAAV-hsyn-flex-Voltron-ST

characteristic: genetic modification

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 35


E-MTAB-13104:Sample 36

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: KIS

text: public

text: E-MTAB-13104:Sample 36

text: ArrayExpress

text: neuron

text: not collected

text: house mouse

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

characteristic: organism part

text: pass

characteristic: post analysis well quality

text: Mus musculus

characteristic: strain

text: Sample 36

characteristic: title


E-MTAB-13104:Sample 37

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KIS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13104:Sample 37

characteristic: Submitter Id

text: ArrayExpress

text: neuron

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 37


E-MTAB-13104:Sample 38

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: KIS

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13104:Sample 38

text: ArrayExpress

characteristic: broker name

text: neuron

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: pAAV-hsyn-flex-Voltron-ST

characteristic: genetic modification

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 38


E-MTAB-13104:Sample 39

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KIS

text: public

text: E-MTAB-13104:Sample 39

text: ArrayExpress

text: neuron

text: not collected

text: house mouse

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

characteristic: organism part

text: pass

characteristic: post analysis well quality

text: Mus musculus

characteristic: strain

text: Sample 39

characteristic: title


E-MTAB-13104:Sample 4

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: KIS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13104:Sample 4

characteristic: Submitter Id

text: ArrayExpress

text: neuron

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 4


E-MTAB-13104:Sample 40

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KIS

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13104:Sample 40

text: ArrayExpress

characteristic: broker name

text: neuron

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: pAAV-hsyn-flex-Voltron-ST

characteristic: genetic modification

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 40


E-MTAB-13104:Sample 41

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: KIS

text: public

text: E-MTAB-13104:Sample 41

text: ArrayExpress

text: neuron

text: not collected

text: house mouse

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

characteristic: organism part

text: pass

characteristic: post analysis well quality

text: Mus musculus

characteristic: strain

text: Sample 41

characteristic: title


E-MTAB-13104:Sample 42

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KIS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13104:Sample 42

characteristic: Submitter Id

text: ArrayExpress

text: neuron

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 42


E-MTAB-13104:Sample 43

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: KIS

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13104:Sample 43

text: ArrayExpress

characteristic: broker name

text: neuron

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: pAAV-hsyn-flex-Voltron-ST

characteristic: genetic modification

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 43


E-MTAB-13104:Sample 44

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KIS

text: public

text: E-MTAB-13104:Sample 44

text: ArrayExpress

text: neuron

text: not collected

text: house mouse

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

characteristic: organism part

text: pass

characteristic: post analysis well quality

text: Mus musculus

characteristic: strain

text: Sample 44

characteristic: title


E-MTAB-13104:Sample 45

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: KIS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13104:Sample 45

characteristic: Submitter Id

text: ArrayExpress

text: neuron

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 45


E-MTAB-13104:Sample 46

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KIS

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13104:Sample 46

text: ArrayExpress

characteristic: broker name

text: neuron

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: pAAV-hsyn-flex-Voltron-ST

characteristic: genetic modification

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 46


E-MTAB-13104:Sample 47

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: KIS

text: public

text: E-MTAB-13104:Sample 47

text: ArrayExpress

text: neuron

text: not collected

text: house mouse

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

characteristic: organism part

text: pass

characteristic: post analysis well quality

text: Mus musculus

characteristic: strain

text: Sample 47

characteristic: title


E-MTAB-13104:Sample 48

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KIS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13104:Sample 48

characteristic: Submitter Id

text: ArrayExpress

text: neuron

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 48


E-MTAB-13104:Sample 49

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: KIS

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13104:Sample 49

text: ArrayExpress

characteristic: broker name

text: neuron

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: pAAV-hsyn-flex-Voltron-ST

characteristic: genetic modification

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 49


E-MTAB-13104:Sample 5

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KIS

text: public

text: E-MTAB-13104:Sample 5

text: ArrayExpress

text: neuron

text: not collected

text: house mouse

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

characteristic: organism part

text: pass

characteristic: post analysis well quality

text: Mus musculus

characteristic: strain

text: Sample 5

characteristic: title


E-MTAB-13104:Sample 50

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: KIS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13104:Sample 50

characteristic: Submitter Id

text: ArrayExpress

text: neuron

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 50


E-MTAB-13104:Sample 51

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KIS

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13104:Sample 51

text: ArrayExpress

characteristic: broker name

text: neuron

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: pAAV-hsyn-flex-Voltron-ST

characteristic: genetic modification

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 51


E-MTAB-13104:Sample 52

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: KIS

text: public

text: E-MTAB-13104:Sample 52

text: ArrayExpress

text: neuron

text: not collected

text: house mouse

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

characteristic: organism part

text: pass

characteristic: post analysis well quality

text: Mus musculus

characteristic: strain

text: Sample 52

characteristic: title


E-MTAB-13104:Sample 53

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KIS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13104:Sample 53

characteristic: Submitter Id

text: ArrayExpress

text: neuron

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 53


E-MTAB-13104:Sample 54

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: KIS

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13104:Sample 54

text: ArrayExpress

characteristic: broker name

text: neuron

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: pAAV-hsyn-flex-Voltron-ST

characteristic: genetic modification

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 54


E-MTAB-13104:Sample 55

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KIS

text: public

text: E-MTAB-13104:Sample 55

text: ArrayExpress

text: neuron

text: not collected

text: house mouse

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

characteristic: organism part

text: pass

characteristic: post analysis well quality

text: Mus musculus

characteristic: strain

text: Sample 55

characteristic: title


E-MTAB-13104:Sample 56

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: KIS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13104:Sample 56

characteristic: Submitter Id

text: ArrayExpress

text: neuron

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 56


E-MTAB-13104:Sample 57

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KIS

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13104:Sample 57

text: ArrayExpress

characteristic: broker name

text: neuron

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: pAAV-hsyn-flex-Voltron-ST

characteristic: genetic modification

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 57


E-MTAB-13104:Sample 58

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: KIS

text: public

text: E-MTAB-13104:Sample 58

text: ArrayExpress

text: neuron

text: not collected

text: house mouse

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

characteristic: organism part

text: pass

characteristic: post analysis well quality

text: Mus musculus

characteristic: strain

text: Sample 58

characteristic: title


E-MTAB-13104:Sample 59

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KIS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13104:Sample 59

characteristic: Submitter Id

text: ArrayExpress

text: neuron

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 59


E-MTAB-13104:Sample 6

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: KIS

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13104:Sample 6

text: ArrayExpress

characteristic: broker name

text: neuron

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: pAAV-hsyn-flex-Voltron-ST

characteristic: genetic modification

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 6


E-MTAB-13104:Sample 60

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KIS

text: public

text: E-MTAB-13104:Sample 60

text: ArrayExpress

text: neuron

text: not collected

text: house mouse

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

characteristic: organism part

text: pass

characteristic: post analysis well quality

text: Mus musculus

characteristic: strain

text: Sample 60

characteristic: title


E-MTAB-13104:Sample 7

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: KIS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13104:Sample 7

characteristic: Submitter Id

text: ArrayExpress

text: neuron

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 7


E-MTAB-13104:Sample 8

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KIS

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13104:Sample 8

text: ArrayExpress

characteristic: broker name

text: neuron

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: pAAV-hsyn-flex-Voltron-ST

characteristic: genetic modification

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

text: pass

text: Mus musculus

text: Sample 8


E-MTAB-13104:Sample 9

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: KIS

text: public

text: E-MTAB-13104:Sample 9

text: ArrayExpress

text: neuron

text: not collected

text: house mouse

text: adult

text: normal

text: pAAV-hsyn-flex-Voltron-ST

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: central gray substance of midbrain

characteristic: organism part

text: fail

characteristic: post analysis well quality

text: Mus musculus

characteristic: strain

text: Sample 9

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: Portugal

text: Blood

text: Haemophilus influenzae

characteristic: organism

text: Haemophilus influenzae

text: NT

characteristic: serotype


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Portugal

text: CSF

text: Haemophilus influenzae

text: Haemophilus influenzae

text: NT


text: public

text: Portugal

characteristic: geographic location (country and/or sea)

text: Blood

text: Haemophilus influenzae

text: Haemophilus influenzae

text: B


text: public

text: Portugal

text: Ear swab

text: Haemophilus influenzae

text: Haemophilus influenzae

text: NT


characteristic: GISAID Accession ID

text: public

tag: Namespace:Laboratory of genomics and metagenomics, Institute of Microbiology, University Hospital Centre and University of Lausanne, Switzerland

text: SIB

characteristic: broker name

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collecting institution

text: Trestan Pillonel, Damien Jacot, Sébastien Aeby, Gilbert Greub, Claire Bertelli

characteristic: collector name

text: Switzerland

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN16923/2023

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: active surveillance not initiated by an outbreak


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Laboratory of genomics and metagenomics, Institute of Microbiology, University Hospital Centre and University of Lausanne, Switzerland

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collection date

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN16842/2023

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SIB

characteristic: broker name

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collecting institution

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN16836/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

text: Switzerland

text: VD

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN16930/2023

characteristic: isolate

characteristic: sample capture status


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collection date

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN16808/2023

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

characteristic: broker name

text: Hôpital Cantonal de Fribourg - HFR, CH-1752 Villars-sur-Glâne, Switzerland

characteristic: collecting institution

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN16942/2023


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

text: Switzerland

text: VD

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN16829/2023

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collection date

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN16828/2023

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

characteristic: broker name

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collecting institution

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN16827/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

text: Switzerland

text: VD

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN16814/2023

characteristic: isolate

characteristic: sample capture status


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collection date

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN16811/2023

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

characteristic: broker name

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collecting institution

text: Trestan Pillonel, Damien Jacot, Sébastien Aeby, Gilbert Greub, Claire Bertelli

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN16846/2023


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

text: Switzerland

text: VD

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN16813/2023

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collection date

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN16826/2023

characteristic: organism

text: active surveillance in response to outbreak

text: active surveillance not initiated by an outbreak

characteristic: title


characteristic: GISAID Accession ID

text: Laboratory of genomics and metagenomics, Institute of Microbiology, University Hospital Centre and University of Lausanne, Switzerland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

characteristic: broker name

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collecting institution

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN16851/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

text: Switzerland

text: VD

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN16850/2023

characteristic: isolate

characteristic: sample capture status


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collection date

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN16847/2023

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

characteristic: broker name

text: Hôpital Cantonal de Fribourg - HFR, CH-1752 Villars-sur-Glâne, Switzerland

characteristic: collecting institution

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN16804/2023


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

text: Switzerland

text: VD

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN16949/2023

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collection date

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN16845/2023

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

characteristic: broker name

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collecting institution

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN16832/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Switzerland

text: VD

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN16944/2023

characteristic: isolate

characteristic: sample capture status


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collection date

text: Trestan Pillonel, Damien Jacot, Sébastien Aeby, Gilbert Greub, Claire Bertelli

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN16936/2023

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

characteristic: broker name

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collecting institution

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN16801/2023


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

text: Switzerland

text: VD

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN16843/2023

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collection date

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN16810/2023

characteristic: organism

text: active surveillance in response to outbreak

characteristic: title


characteristic: GISAID Accession ID

text: Laboratory of genomics and metagenomics, Institute of Microbiology, University Hospital Centre and University of Lausanne, Switzerland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

characteristic: broker name

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collecting institution

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN16953/2023

text: active surveillance not initiated by an outbreak


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

text: Switzerland

text: VD

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN16950/2023

characteristic: isolate

characteristic: sample capture status


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collection date

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN16830/2023

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

characteristic: broker name

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collecting institution

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN16833/2023


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Hôpital Cantonal de Fribourg - HFR, CH-1752 Villars-sur-Glâne, Switzerland

text: Switzerland

text: VD

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN16937/2023

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collection date

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN16815/2023

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN16821/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

text: Trestan Pillonel, Damien Jacot, Sébastien Aeby, Gilbert Greub, Claire Bertelli

text: Switzerland

text: VD

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN16802/2023

characteristic: isolate

characteristic: sample capture status


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collection date

text: Switzerland

text: VD

text: Human

text: restricted access

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text: public

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

text: Trestan Pillonel, Damien Jacot, Sébastien Aeby, Gilbert Greub, Claire Bertelli

text: Switzerland

text: VD

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN16946/2023

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collection date

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN16934/2023

characteristic: organism

characteristic: title


S. japonicus EV 1.0

text: The Earlham Insitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: S. japonicus EV 1.0

tag: Namespace:The Earlham Insitute

text: Furuya and Niki

characteristic: common name

text: Japan

characteristic: geographic location (country and/or sea)

text: Strawberry wine

text: Schizosaccharomyces japonicus

text: Schizosaccharomyces japonicus

text: Schizosaccharomyces japonicus EI 1.0

text: japonicus

characteristic: variety


text: NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE

text: public

text: MDR-TB

characteristic: description

text: Portugal

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis


characteristic: ENA-CHECKLIST

text: public

text: RR-TB

text: Portugal

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis


characteristic: ENA-FIRST-PUBLIC

text: public

text: Sensitive

text: Portugal

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis


characteristic: ENA-LAST-UPDATE

text: public

text: HR-TB

text: Portugal

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis


characteristic: External Id

text: public

text: Other

text: Portugal

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis


characteristic: GISAID Accession ID

text: public

characteristic: INSDC status

text: SIB

characteristic: broker name

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN17020/2023

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN17026/2023

characteristic: organism

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: public

characteristic: INSDC status

text: SIB

characteristic: broker name

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN17019/2023


characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

text: Switzerland

text: VD

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN17021/2023

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN17024/2023

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

text: Laboratory of genomics and metagenomics, Institute of Microbiology, University Hospital Centre and University of Lausanne, Switzerland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

characteristic: broker name

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN17023/2023


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: GISAID Accession ID

text: public

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

text: Switzerland

text: VD

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN17022/2023

characteristic: isolate

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

tag: Namespace:The Blizard Institute Barts and The London School of Medicine and Dentistry, Queen Mary, University of London

characteristic: Submitter Id

text: ArrayExpress

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: Protocols: Infected GFP+ Suit-2 cells were isolated by Fluorescence Activated Cell Sorting Suit-2 cells were infected with 1pfu AdWTGFP for 2 hours in serum free media. Cells were then washed and cultured for 10 hours in 2% FBS Cells were treated with DMSO for 12 hours in 2% FBS Total RNA was isolated and purified using TRIzol reagent (Life Technologies) according to the manufacturer's instructions mRNA was enriched by Poly(A) mRNA magnetic beads (New England BioLabs) and the NEBnext Ultra II RNA Library Prep Kit for Illumina (E7770) was used to generate RNA sequencing libraries according to the manufacturer's instructions.

characteristic: description

text: adult

characteristic: developmental stage

text: pancreatic tubular adenocarcinoma

characteristic: disease

text: not collected

characteristic: geographic location (country and/or sea)

text: AdWTGFP

characteristic: infect

text: not applicable

text: liver

characteristic: metastatic site

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: pancreas

characteristic: organism part

text: Homo sapiens

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The Blizard Institute Barts and The London School of Medicine and Dentistry, Queen Mary, University of London

text: public

characteristic: INSDC status

text: ArrayExpress

characteristic: broker name

text: not collected

text: human

text: adult

text: pancreatic tubular adenocarcinoma

text: not collected

text: AdWTGFP

text: not applicable

characteristic: isolate

text: liver

text: Homo sapiens

text: Homo sapiens

text: pancreas

text: Homo sapiens


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: Protocols: Suit-2 cells were harvested according to normal methods Suit-2 cells were cultured in normal growth media in 10% FBS Cells were treated with DMSO for 12 hours in 2% FBS Total RNA was isolated and purified using TRIzol reagent (Life Technologies) according to the manufacturer's instructions mRNA was enriched by Poly(A) mRNA magnetic beads (New England BioLabs) and the NEBnext Ultra II RNA Library Prep Kit for Illumina (E7770) was used to generate RNA sequencing libraries according to the manufacturer's instructions.

text: adult

text: pancreatic tubular adenocarcinoma

text: not collected

text: not applicable

text: liver

text: Homo sapiens

text: Homo sapiens

text: pancreas

text: Homo sapiens


text: public

text: ArrayExpress

text: not collected

text: human

text: Protocols: Infected GFP+ Suit-2 cells were isolated by Fluorescence Activated Cell Sorting Suit-2 cells were infected with 1pfu AdWTGFP for 2 hours in serum free media. Cells were then washed and cultured for 10 hours in 2% FBS Cells were treated with 2 micromolar I-bet-762 for 12 hours in 2% FBS Total RNA was isolated and purified using TRIzol reagent (Life Technologies) according to the manufacturer's instructions mRNA was enriched by Poly(A) mRNA magnetic beads (New England BioLabs) and the NEBnext Ultra II RNA Library Prep Kit for Illumina (E7770) was used to generate RNA sequencing libraries according to the manufacturer's instructions.

characteristic: description

text: adult

characteristic: developmental stage

text: pancreatic tubular adenocarcinoma

characteristic: disease

text: not collected

characteristic: geographic location (country and/or sea)

text: AdWTGFP

characteristic: infect

text: not applicable

text: liver

characteristic: metastatic site

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: pancreas

text: Homo sapiens


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

text: ArrayExpress

text: not collected

text: human

text: Protocols: Suit-2 cells were harvested according to normal methods Suit-2 cells were cultured in normal growth media in 10% FBS Cells were treated with 2 micromolar I-bet-762 for 12 hours in 2% FBS Total RNA was isolated and purified using TRIzol reagent (Life Technologies) according to the manufacturer's instructions mRNA was enriched by Poly(A) mRNA magnetic beads (New England BioLabs) and the NEBnext Ultra II RNA Library Prep Kit for Illumina (E7770) was used to generate RNA sequencing libraries according to the manufacturer's instructions.

text: adult

text: pancreatic tubular adenocarcinoma

text: not collected

text: not applicable

text: liver

text: Homo sapiens

text: Homo sapiens

text: pancreas

characteristic: organism part

text: Homo sapiens

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

text: human

text: Protocols: Infected GFP+ Suit-2 cells were isolated by Fluorescence Activated Cell Sorting Suit-2 cells were infected with 1pfu AdWTGFP for 2 hours in serum free media. Cells were then washed and cultured for 10 hours in 2% FBS Cells were treated with 0.5 micromolar NEO27034 for 12 hours in 2% FBS Total RNA was isolated and purified using TRIzol reagent (Life Technologies) according to the manufacturer's instructions mRNA was enriched by Poly(A) mRNA magnetic beads (New England BioLabs) and the NEBnext Ultra II RNA Library Prep Kit for Illumina (E7770) was used to generate RNA sequencing libraries according to the manufacturer's instructions.

text: adult

text: pancreatic tubular adenocarcinoma

text: not collected

text: AdWTGFP

text: not applicable

characteristic: isolate

text: liver

text: Homo sapiens

text: Homo sapiens

text: pancreas

text: Homo sapiens


text: public

text: ArrayExpress

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: Protocols: Suit-2 cells were harvested according to normal methods Suit-2 cells were cultured in normal growth media in 10% FBS Cells were treated with 0.5 micromolar NEO27034 for 12 hours in 2% FBS Total RNA was isolated and purified using TRIzol reagent (Life Technologies) according to the manufacturer's instructions mRNA was enriched by Poly(A) mRNA magnetic beads (New England BioLabs) and the NEBnext Ultra II RNA Library Prep Kit for Illumina (E7770) was used to generate RNA sequencing libraries according to the manufacturer's instructions.

characteristic: description

text: adult

characteristic: developmental stage

text: pancreatic tubular adenocarcinoma

characteristic: disease

text: not collected

characteristic: geographic location (country and/or sea)

characteristic: infect

text: not applicable

text: liver

text: Homo sapiens

text: Homo sapiens

text: pancreas

text: Homo sapiens


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

text: ArrayExpress

text: not collected

text: human

text: Protocols: Infected GFP+ Suit-2 cells were isolated by Fluorescence Activated Cell Sorting Suit-2 cells were infected with 1pfu AdWTGFP for 2 hours in serum free media. Cells were then washed and cultured for 10 hours in 2% FBS Cells were treated with 1 micromolar OTX015 for 12 hours in 2% FBS Total RNA was isolated and purified using TRIzol reagent (Life Technologies) according to the manufacturer's instructions mRNA was enriched by Poly(A) mRNA magnetic beads (New England BioLabs) and the NEBnext Ultra II RNA Library Prep Kit for Illumina (E7770) was used to generate RNA sequencing libraries according to the manufacturer's instructions.

text: adult

text: pancreatic tubular adenocarcinoma

text: not collected

text: AdWTGFP

text: not applicable

text: liver

characteristic: metastatic site

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: pancreas

text: Homo sapiens


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: not collected

text: human

text: Protocols: Suit-2 cells were harvested according to normal methods Suit-2 cells were cultured in normal growth media in 10% FBS Cells were treated with 1 micromolar OTX015 for 12 hours in 2% FBS Total RNA was isolated and purified using TRIzol reagent (Life Technologies) according to the manufacturer's instructions mRNA was enriched by Poly(A) mRNA magnetic beads (New England BioLabs) and the NEBnext Ultra II RNA Library Prep Kit for Illumina (E7770) was used to generate RNA sequencing libraries according to the manufacturer's instructions.

text: adult

text: pancreatic tubular adenocarcinoma

text: not collected

text: not applicable

text: liver

text: Homo sapiens

text: Homo sapiens

text: pancreas

characteristic: organism part

text: Homo sapiens

characteristic: title


text: Centro Nacional de Análisis Genómico

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: NOT APPLICABLE

text: COPO

characteristic: broker name

text: Gemma I. Martinez-Redondo | Vanina Tonzo | Jesus Lozano-Fernandez | Leandro Aristide | Rosa Fernandez

text: Institut de Biologia Evolutiva (CSIC - Universitat Pompeu Fabra)

characteristic: collecting institution

characteristic: collection date

characteristic: collector ORCID ID

text: Spain

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Catalonia | Barcelona | Montseny Natural Reserve

characteristic: geographic location (region and locality)

text: River

characteristic: habitat

text: Andreas Schmidt-Rhaesa

text: Leibniz Institute for the Analysis of Biodiversity Change - Hamburg

text: adult

characteristic: lifestage

text: Gordionus sp. m RMFG-2023

text: WHOLE ORGANISM

text: ERGA

characteristic: project name

text: Caught by hand

characteristic: sample collection device or method

text: ROSA FERNANDEZ

characteristic: sample coordinator

characteristic: sample coordinator ORCID ID

characteristic: sample coordinator affiliation

text: Gordionus sp. m RMFG-2023

text: NOT PROVIDED

characteristic: sex

text: ERGA RF 6640 0004

text: 83bf6215-bc74-4476-9eff-5d681730bdd8-ERGA-specimen

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Centro Nacional de Análisis Genómico

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOT APPLICABLE

text: COPO

text: Spain

characteristic: geographic location (country and/or sea)

text: River

text: Andreas Schmidt-Rhaesa

text: adult

text: Gordionus sp. m RMFG-2023

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ERGA

text: Caught by hand

text: ROSA FERNANDEZ

text: Gordionus sp. m RMFG-2023

text: NOT PROVIDED

text: ERGA RF 6640 0003

text: da494391-6bce-43e0-8543-bc3814553009-ERGA-specimen

characteristic: title