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text: anaerobic bioreactor

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characteristic: description

text: anaerobic sludge

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

text: anaerobic digester metagenome

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characteristic: perturbation

text: STABILICS

characteristic: project name

text: anaerobic digester metagenome

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status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

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text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 35 and in the replicate J

text: anaerobic sludge

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unit: DD

characteristic: geographic location (latitude)

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characteristic: geographic location (latitude)

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text: anaerobic sludge

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

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text: anaerobic sludge

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text: anaerobic digester metagenome

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text: anaerobic bioreactor

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text: anaerobic sludge

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text: anaerobic sludge

characteristic: environmental medium

text: France

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text: anaerobic digester metagenome

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text: anaerobic bioreactor

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text: France

text: anaerobic digester metagenome

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text: anaerobic bioreactor

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text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 10 and in the replicate K

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text: anaerobic sludge

characteristic: environmental medium

text: France

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text: anaerobic digester metagenome

text: no perturbation

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text: anaerobic sludge

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characteristic: geographic location (latitude)

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text: anaerobic bioreactor

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text: France

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text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 22 and in the replicate K

text: anaerobic sludge

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: anaerobic digester metagenome

text: 10g/L NaCl

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM


text: INRAE

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text: anaerobic bioreactor

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text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 25 and in the replicate K

characteristic: description

text: anaerobic sludge

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

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text: anaerobic digester metagenome

characteristic: organism

text: 15g/L NaCL

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM


characteristic: ENA-CHECKLIST

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text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 28 and in the replicate K

text: anaerobic sludge

text: France

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text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 31 and in the replicate K

text: anaerobic sludge

text: France

text: anaerobic digester metagenome

text: 25 g/L NaCl

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text: anaerobic bioreactor

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characteristic: description

text: anaerobic sludge

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: anaerobic digester metagenome

text: 30g/L NaCL

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM


characteristic: ENA-CHECKLIST

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text: France

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text: Ion Torrent PGM


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text: anaerobic bioreactor

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text: anaerobic sludge

text: France

text: anaerobic digester metagenome

text: 30g/L NaCL

text: STABILICS

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characteristic: sequencing method

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text: anaerobic bioreactor

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text: France

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text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 42 and in the replicate K

text: anaerobic sludge

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: anaerobic digester metagenome

text: 30g/L NaCL

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM


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characteristic: INSDC status

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text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 45 and in the replicate K

text: anaerobic sludge

text: France

characteristic: local environmental context

text: anaerobic digester metagenome

characteristic: organism

text: 25g/L NaCl

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM


text: INRAE

text: public

text: anaerobic bioreactor

characteristic: broad-scale environmental context

characteristic: collection date

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 48 and in the replicate K

characteristic: description

text: anaerobic sludge

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

text: anaerobic digester metagenome

text: 20g/L NaCl

text: STABILICS

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text: Ion Torrent PGM

characteristic: sequencing method

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text: INRAE

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text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 51 and in the replicate K

text: anaerobic sludge

text: France

text: anaerobic digester metagenome

text: 15g/L NaCl

characteristic: perturbation

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text: anaerobic digester metagenome

text: Ion Torrent PGM


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characteristic: INSDC status

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text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 54 and in the replicate K

text: anaerobic sludge

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: anaerobic digester metagenome

text: 10g/L NaCL

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM


text: INRAE

text: public

text: anaerobic bioreactor

characteristic: broad-scale environmental context

characteristic: collection date

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 57 and in the replicate K

characteristic: description

text: anaerobic sludge

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: local environmental context

text: anaerobic digester metagenome

characteristic: organism

text: 5g/L NaCl

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM


characteristic: ENA-CHECKLIST

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text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 60 and in the replicate K

text: anaerobic sludge

text: France

text: anaerobic digester metagenome

text: no perturbation

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text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 64 and in the replicate K

text: anaerobic sludge

text: France

text: anaerobic digester metagenome

text: no perturbation

characteristic: perturbation

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text: anaerobic digester metagenome

text: Ion Torrent PGM


text: INRAE

text: public

text: anaerobic bioreactor

characteristic: broad-scale environmental context

characteristic: collection date

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 0 and in the replicate L

characteristic: description

text: anaerobic sludge

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesophilic anaerobic methanogenic reactor

text: anaerobic digester metagenome

text: no perturbation

text: STABILICS

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text: Ion Torrent PGM


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text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 2 and in the replicate L

text: anaerobic sludge

text: France

characteristic: local environmental context

text: anaerobic digester metagenome

characteristic: organism

text: no perturbation

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text: Ion Torrent PGM


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characteristic: INSDC status

characteristic: SRA accession

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text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 5 and in the replicate L

text: anaerobic sludge

text: France

text: anaerobic digester metagenome

text: no perturbation

text: STABILICS

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text: Ion Torrent PGM

characteristic: sequencing method

characteristic: title


text: INRAE

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text: anaerobic bioreactor

characteristic: broad-scale environmental context

characteristic: collection date

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 8 and in the replicate L

characteristic: description

text: anaerobic sludge

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

text: anaerobic digester metagenome

text: no perturbation

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text: STABILICS

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text: anaerobic digester metagenome

text: Ion Torrent PGM


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

text: INRAE

characteristic: INSDC center name

text: public

text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 10 and in the replicate L

text: anaerobic sludge

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: anaerobic digester metagenome

text: no perturbation

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM


text: INRAE

characteristic: INSDC first public

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 13 and in the replicate L

text: anaerobic sludge

text: France

characteristic: local environmental context

text: anaerobic digester metagenome

characteristic: organism

text: no perturbation

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM


text: INRAE

text: public

text: anaerobic bioreactor

characteristic: broad-scale environmental context

characteristic: collection date

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 14 and in the replicate L

characteristic: description

text: anaerobic sludge

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

text: anaerobic digester metagenome

text: no perturbation

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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characteristic: External Id

text: INRAE

characteristic: INSDC center name

text: public

text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 16 and in the replicate L

text: anaerobic sludge

text: France

text: anaerobic digester metagenome

text: no perturbation

characteristic: perturbation

text: STABILICS

characteristic: project name

text: anaerobic digester metagenome

text: Ion Torrent PGM


text: INRAE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 18 and in the replicate L

text: anaerobic sludge

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: anaerobic digester metagenome

text: no perturbation

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM


text: INRAE

text: public

text: anaerobic bioreactor

characteristic: broad-scale environmental context

characteristic: collection date

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 19 and in the replicate L

characteristic: description

text: anaerobic sludge

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: local environmental context

text: anaerobic digester metagenome

characteristic: organism

text: no perturbation

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRAE

characteristic: INSDC center name

text: public

text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 20 and in the replicate L

text: anaerobic sludge

text: France

text: anaerobic digester metagenome

text: 5 g/L NaCl

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM

characteristic: sequencing method

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 22 and in the replicate L

text: anaerobic sludge

text: France

text: anaerobic digester metagenome

text: 10g/L NaCl

characteristic: perturbation

text: STABILICS

characteristic: project name

text: anaerobic digester metagenome

text: Ion Torrent PGM


text: INRAE

text: public

text: anaerobic bioreactor

characteristic: broad-scale environmental context

characteristic: collection date

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 25 and in the replicate L

characteristic: description

text: anaerobic sludge

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: anaerobic digester metagenome

text: 15g/L NaCL

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRAE

characteristic: INSDC center name

text: public

text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 28 and in the replicate L

text: anaerobic sludge

text: France

characteristic: local environmental context

text: anaerobic digester metagenome

characteristic: organism

text: 20g/L NaCL

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM


text: INRAE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 31 and in the replicate L

text: anaerobic sludge

text: France

text: anaerobic digester metagenome

text: 25 g/L NaCl

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM

characteristic: sequencing method

characteristic: title


text: INRAE

text: public

text: anaerobic bioreactor

characteristic: broad-scale environmental context

characteristic: collection date

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 34 and in the replicate L

characteristic: description

text: anaerobic sludge

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

text: anaerobic digester metagenome

text: 30g/L NaCL

characteristic: perturbation

text: STABILICS

characteristic: project name

text: anaerobic digester metagenome

text: Ion Torrent PGM


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRAE

characteristic: INSDC center name

text: public

text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 35 and in the replicate L

text: anaerobic sludge

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: anaerobic digester metagenome

text: 30g/L NaCL

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM


text: INRAE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 37 and in the replicate L

text: anaerobic sludge

text: France

text: mesophilic anaerobic methanogenic reactor

characteristic: local environmental context

text: anaerobic digester metagenome

characteristic: organism

text: 30g/L NaCL

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM


text: INRAE

text: public

text: anaerobic bioreactor

characteristic: broad-scale environmental context

characteristic: collection date

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 40 and in the replicate L

characteristic: description

text: anaerobic sludge

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

text: anaerobic digester metagenome

text: 30g/L NaCL

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRAE

characteristic: INSDC center name

text: public

text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 42 and in the replicate L

text: anaerobic sludge

text: France

text: anaerobic digester metagenome

text: 30g/L NaCL

characteristic: perturbation

text: STABILICS

characteristic: project name

text: anaerobic digester metagenome

text: Ion Torrent PGM


text: INRAE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 45 and in the replicate L

text: anaerobic sludge

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: anaerobic digester metagenome

text: 25g/L NaCl

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM


text: INRAE

text: public

text: anaerobic bioreactor

characteristic: broad-scale environmental context

characteristic: collection date

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 48 and in the replicate L

characteristic: description

text: anaerobic sludge

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: local environmental context

text: anaerobic digester metagenome

characteristic: organism

text: 20g/L NaCl

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRAE

characteristic: INSDC center name

text: public

text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 51 and in the replicate L

text: anaerobic sludge

text: France

text: anaerobic digester metagenome

text: 15g/L NaCl

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM

characteristic: sequencing method

characteristic: title


text: INRAE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 54 and in the replicate L

text: anaerobic sludge

text: France

text: anaerobic digester metagenome

text: 10g/L NaCL

characteristic: perturbation

text: STABILICS

characteristic: project name

text: anaerobic digester metagenome

text: Ion Torrent PGM


text: INRAE

text: public

text: anaerobic bioreactor

characteristic: broad-scale environmental context

characteristic: collection date

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 57 and in the replicate L

characteristic: description

text: anaerobic sludge

characteristic: environmental medium

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: anaerobic digester metagenome

text: 5g/L NaCl

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INRAE

characteristic: INSDC center name

text: public

text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 60 and in the replicate L

text: anaerobic sludge

text: France

characteristic: local environmental context

text: anaerobic digester metagenome

characteristic: organism

text: no perturbation

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM


text: INRAE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: anaerobic bioreactor

text: 16S metabarcoding of rRNA (region V4-V5), sample collected at week 64 and in the replicate L

text: anaerobic sludge

text: France

text: anaerobic digester metagenome

text: no perturbation

text: STABILICS

text: anaerobic digester metagenome

text: Ion Torrent PGM

characteristic: sequencing method

characteristic: title


text: UNIVERSITY HOHENHEIM

text: public

tag: Namespace:UNIVERSITY HOHENHEIM

characteristic: description

text: gut metagenome

text: gut metagenome


text: NCIPD

text: public

characteristic: collection date

text: Staphylococcus aureus sample isolated from a patient suffering necrotizing fasciitis

text: Bulgaria

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

characteristic: isolate

text: wound

text: 43.225887 N 27.936721 E

text: Staphylococcus aureus

text: Staphylococcus aureus

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NOFIMA

characteristic: INSDC center name

text: public

text: ArrayExpress

characteristic: broker name

text: Atlantic cod

characteristic: common name

text: Protocols: Samples were collected 1) the day before the temperature was increased, 2) when the water temperature reached 17oC and 3) 5 weeks post infection. Fish (n=6, length = 23±2cm; weight =114±33g) were dip netted from the tank and were euthanised with an overdose of Benzoak Vet. The olfactory organ was exposed by opening the olfactory cavity via the nostril. The right olfactory organ was immediately placed in BiopSafe containing 10% formalin (Mermaid Medical, Vedbæk, Denmark) for histological processing. On the other hand, the left olfactory organ was placed in RNAlater® (Ambion, Inc., Connecticut, USA), allowed tissue penetration at 4oC overnight and stored at -40oC prior to RNA isolation. Total RNA was isolated from the olfactory organ using the Agencourt RNAdvance™ Tissue Total RNA Purification Kit (Beckman Coulter Inc., CA, USA). The purified RNA was quantified using NanoDrop 8000 Spectrophotometer (ThermoFisher Scientific, United States) and integrity was further assessed using the Agilent® 2100 Bioanalyzer™ RNA 6000 Nano Kit (Agilent Technology Inc., Santa Clara, CA, USA). All samples had an RNA Integrity Number (RIN) above 7.0. Total RNA samples were sent to the Norwegian Sequecing Center (OUS, Norway). The strand-specific TruSeq RNA Library Prep Kit (Illumina, CA, USA) was used for preparation of RNA-seq libraries, using the manufacturer’s protocol.

text: Gadus morhua

text: Gadus morhua

text: olfactory bulb

characteristic: organism part

text: Gadus morhua

text: water temperature 12 oC

characteristic: stimulus


text: NOFIMA

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: Atlantic cod

text: Gadus morhua

characteristic: organism

text: Gadus morhua

text: olfactory bulb

text: Gadus morhua

text: water temperature 17 oC

characteristic: title


text: NOFIMA

text: public

text: ArrayExpress

text: Atlantic cod

characteristic: description

text: Francisella noatunensis

characteristic: infect

text: Gadus morhua

text: Gadus morhua

text: olfactory bulb

text: Gadus morhua

text: water temperature 12 oC


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NOFIMA

text: public

text: ArrayExpress

text: Atlantic cod

text: Francisella noatunensis

text: Gadus morhua

text: Gadus morhua

text: olfactory bulb

text: Gadus morhua

text: water temperature 17 oC


E-MTAB-12872:Sample 1

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF MANCHESTER

text: public

text: E-MTAB-12872:Sample 1

tag: Namespace:UNIVERSITY OF MANCHESTER

text: ArrayExpress

text: house mouse

text: Protocols: Once treatment was completed, mice were sacrificed and tumours were harvested and processed into RNA for sequencing. YUMM2.1 cells (provided by Richard Marais, The University of Manchester) were maintained in RPMI-1640 (Sigma-Aldrich) supplemented with 10% foetal bovine serum (FBS; Life Technologies) and 1% penicillin-streptomycin (P/S; Sigma-Aldrich). All cells were maintained under standard conditions at 37°C in a 5% CO2 humidified incubator and passaged before reaching confluency. For IFN-γ-pre-treatment, IFN-γ 50 IU/ml was added to the medium for at least 2 weeks. IFN-γ-naïve or IFN-γ-pre-treated YUMM2.1 cells were implanted subcutaneously into 8-week-old C57BL/6J female mice. There were 4 experimental treatments. Control - After tumour establishment, IFN-γ-naïve YUMM2.1 tumour-bearing mice received two doses of IgG2a antibodies (300ug per dose) three days apart. PD-1 resistance - After tumour establishment, IFN-γ-naïve YUMM2.1 tumour-bearing mice received two doses of α-PD-1 antibodies (300ug per dose) three days apart. Following the final dose of α-PD-1, tumours were permitted to regrow to their pre-treatment size before further treatment commenced. At this point, we initiated one week of treatment with vehicle. PD-1 responding - After tumour establishment, IFN-γ-naïve YUMM2.1 tumour-bearing mice received two doses of α-PD-1 antibodies (300ug per dose) three days apart. IFN-γ-pre-treated - IFN-γ-pre-treated YUMM2.1 tumour-bearing mice received two doses of IgG2a antibodies (300ug per dose) three days apart. Total RNA was extracted using QIAzol Lysis Reagent and isolated using RNAeasy mini kit (both from QIAGEN). Illumina stranded RNA library

text: implanted in adult female C57BL/6J mice

characteristic: growth condition

text: Mus musculus

text: Mus musculus

text: control

characteristic: pd-1 status

text: none (IFN-γ-naïve)

characteristic: pre-treatment

text: tumor

characteristic: sampling site

text: Mus musculus

text: two doses of IgG2a antibodies

text: Sample 1


E-MTAB-12872:Sample 10

text: UNIVERSITY OF MANCHESTER

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-12872:Sample 10

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: implanted in adult female C57BL/6J mice

text: Mus musculus

text: Mus musculus

text: PD-1 responding

text: none (IFN-γ-naïve)

text: tumor

text: Mus musculus

text: two doses of α-PD-1 antibodies

characteristic: stimulus

text: Sample 10


E-MTAB-12872:Sample 11

text: UNIVERSITY OF MANCHESTER

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12872:Sample 11

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

text: implanted in adult female C57BL/6J mice

text: Mus musculus

characteristic: organism

text: Mus musculus

text: PD-1 responding

text: none (IFN-γ-naïve)

text: tumor

text: Mus musculus

text: two doses of α-PD-1 antibodies

text: Sample 11


E-MTAB-12872:Sample 12

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF MANCHESTER

text: public

text: E-MTAB-12872:Sample 12

text: ArrayExpress

text: house mouse

characteristic: description

text: implanted in adult female C57BL/6J mice

text: Mus musculus

text: Mus musculus

text: PD-1 responding

text: none (IFN-γ-naïve)

text: tumor

text: Mus musculus

text: two doses of α-PD-1 antibodies

text: Sample 12

characteristic: title


E-MTAB-12872:Sample 13

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF MANCHESTER

text: public

text: E-MTAB-12872:Sample 13

text: ArrayExpress

text: house mouse

text: implanted in adult female C57BL/6J mice

characteristic: growth condition

text: Mus musculus

text: Mus musculus

text: control

characteristic: pd-1 status

text: IFN-γ-pre-treated

text: tumor

text: Mus musculus

text: two doses of IgG2a antibodies

text: Sample 13


E-MTAB-12872:Sample 14

text: UNIVERSITY OF MANCHESTER

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-12872:Sample 14

text: ArrayExpress

text: house mouse

text: implanted in adult female C57BL/6J mice

text: Mus musculus

text: Mus musculus

text: control

text: IFN-γ-pre-treated

characteristic: pre-treatment

text: tumor

characteristic: sampling site

text: Mus musculus

text: two doses of IgG2a antibodies

text: Sample 14


E-MTAB-12872:Sample 15

text: UNIVERSITY OF MANCHESTER

characteristic: INSDC last update

text: public

text: E-MTAB-12872:Sample 15

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: implanted in adult female C57BL/6J mice

text: Mus musculus

text: Mus musculus

text: control

text: IFN-γ-pre-treated

text: tumor

text: Mus musculus

text: two doses of IgG2a antibodies

characteristic: stimulus

text: Sample 15


E-MTAB-12872:Sample 16

text: UNIVERSITY OF MANCHESTER

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12872:Sample 16

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

text: implanted in adult female C57BL/6J mice

text: Mus musculus

characteristic: organism

text: Mus musculus

text: control

text: IFN-γ-pre-treated

text: tumor

text: Mus musculus

text: two doses of IgG2a antibodies

text: Sample 16


E-MTAB-12872:Sample 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF MANCHESTER

text: public

text: E-MTAB-12872:Sample 2

text: ArrayExpress

text: house mouse

characteristic: description

text: implanted in adult female C57BL/6J mice

text: Mus musculus

text: Mus musculus

text: control

text: none (IFN-γ-naïve)

text: tumor

text: Mus musculus

text: two doses of IgG2a antibodies

text: Sample 2

characteristic: title


E-MTAB-12872:Sample 3

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF MANCHESTER

text: public

text: E-MTAB-12872:Sample 3

text: ArrayExpress

text: house mouse

text: implanted in adult female C57BL/6J mice

characteristic: growth condition

text: Mus musculus

text: Mus musculus

text: control

characteristic: pd-1 status

text: none (IFN-γ-naïve)

text: tumor

text: Mus musculus

text: two doses of IgG2a antibodies

text: Sample 3


E-MTAB-12872:Sample 4

text: UNIVERSITY OF MANCHESTER

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-12872:Sample 4

text: ArrayExpress

text: house mouse

text: implanted in adult female C57BL/6J mice

text: Mus musculus

text: Mus musculus

text: control

text: none (IFN-γ-naïve)

characteristic: pre-treatment

text: tumor

characteristic: sampling site

text: Mus musculus

text: two doses of IgG2a antibodies

text: Sample 4


E-MTAB-12872:Sample 5

text: UNIVERSITY OF MANCHESTER

characteristic: INSDC last update

text: public

text: E-MTAB-12872:Sample 5

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: implanted in adult female C57BL/6J mice

text: Mus musculus

text: Mus musculus

text: PD-1 resistant

text: none (IFN-γ-naïve)

text: tumor

text: Mus musculus

text: two doses of α-PD-1 antibodies

characteristic: stimulus

text: Sample 5


E-MTAB-12872:Sample 6

text: UNIVERSITY OF MANCHESTER

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12872:Sample 6

characteristic: Submitter Id

text: ArrayExpress

text: house mouse

text: implanted in adult female C57BL/6J mice

text: Mus musculus

characteristic: organism

text: Mus musculus

text: PD-1 resistant

text: none (IFN-γ-naïve)

text: tumor

text: Mus musculus

text: two doses of α-PD-1 antibodies

text: Sample 6


E-MTAB-12872:Sample 7

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF MANCHESTER

text: public

text: E-MTAB-12872:Sample 7

text: ArrayExpress

text: house mouse

characteristic: description

text: implanted in adult female C57BL/6J mice

text: Mus musculus

text: Mus musculus

text: PD-1 resistant

text: none (IFN-γ-naïve)

text: tumor

text: Mus musculus

text: two doses of α-PD-1 antibodies

text: Sample 7

characteristic: title


E-MTAB-12872:Sample 8

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF MANCHESTER

text: public

text: E-MTAB-12872:Sample 8

text: ArrayExpress

text: house mouse

text: implanted in adult female C57BL/6J mice

characteristic: growth condition

text: Mus musculus

text: Mus musculus

text: PD-1 resistant

characteristic: pd-1 status

text: none (IFN-γ-naïve)

text: tumor

text: Mus musculus

text: two doses of α-PD-1 antibodies

text: Sample 8


E-MTAB-12872:Sample 9

text: UNIVERSITY OF MANCHESTER

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-12872:Sample 9

text: ArrayExpress

text: house mouse

text: implanted in adult female C57BL/6J mice

text: Mus musculus

text: Mus musculus

text: PD-1 responding

text: none (IFN-γ-naïve)

characteristic: pre-treatment

text: tumor

characteristic: sampling site

text: Mus musculus

text: two doses of α-PD-1 antibodies

text: Sample 9


text: NTNU University Museum

characteristic: INSDC last update

text: public

tag: Namespace:NTNU University Museum

text: Norway

characteristic: geographic location (country and/or sea)

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: platyrhynchus

text: tissue


text: NTNU University Museum

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: tarandus

text: tissue


text: NTNU University Museum

text: public

characteristic: Submitter Id

text: Russia

text: Rangifer tarandus platyrhyncus

characteristic: organism

text: Rangifer tarandus platyrhyncus

text: tarandus

text: tissue


text: Plasmodium falciparum

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: malaria parasite P. falciparum

characteristic: common name

text: Plasmodium falciparum

text: Plasmodium falciparum


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hospital Sirio-Libanes

text: public

tag: Namespace:Hospital Sirio-Libanes

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V29

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

characteristic: patient

text: Bladder microbiota in bladder cancer and controls

characteristic: project name

unit: °C

characteristic: sample storage temperature

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: sequencing method

characteristic: title

text: catheter

characteristic: urine/collection method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V30

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

characteristic: organism

text: human urinary tract metagenome

text: Illumina MiSeq

text: catheter


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V31

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

characteristic: patient

characteristic: project name

characteristic: sample storage temperature

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: sequencing method

characteristic: title

text: catheter


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V32

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

text: catheter

characteristic: urine/collection method


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V33

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

characteristic: organism

characteristic: patient

characteristic: project name

characteristic: sample storage temperature

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: catheter


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V34

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: title

text: catheter


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V35

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

characteristic: organism

characteristic: patient

characteristic: project name

characteristic: sample storage temperature

text: human urinary tract metagenome

text: Illumina MiSeq

text: catheter

characteristic: urine/collection method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V36

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: catheter


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V37

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

characteristic: organism

characteristic: patient

characteristic: project name

characteristic: sample storage temperature

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: title

text: catheter


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V38

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

text: catheter

characteristic: urine/collection method


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V39

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

characteristic: organism

characteristic: patient

characteristic: project name

characteristic: sample storage temperature

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: catheter


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V40

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: title

text: catheter


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V41

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

characteristic: organism

characteristic: patient

characteristic: project name

characteristic: sample storage temperature

text: human urinary tract metagenome

text: Illumina MiSeq

text: catheter

characteristic: urine/collection method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V42

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: catheter


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V43

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

characteristic: organism

characteristic: patient

characteristic: project name

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text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: title

text: catheter


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V44

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

text: catheter

characteristic: urine/collection method


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V45

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

characteristic: organism

characteristic: patient

characteristic: project name

characteristic: sample storage temperature

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: catheter


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V46

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: title

text: catheter


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V47

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

characteristic: organism

characteristic: patient

characteristic: project name

characteristic: sample storage temperature

text: human urinary tract metagenome

text: Illumina MiSeq

text: catheter

characteristic: urine/collection method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V48

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: catheter


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V49

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

characteristic: organism

characteristic: patient

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text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: title

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characteristic: ENA-CHECKLIST

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characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V50

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

text: catheter

characteristic: urine/collection method


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V51

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

characteristic: organism

characteristic: patient

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text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: catheter


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V52

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: title

text: catheter


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V53

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

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characteristic: INSDC center name

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text: public

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characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V54

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: catheter


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V55

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text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

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text: human urinary tract metagenome

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text: Illumina MiSeq

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characteristic: ENA-CHECKLIST

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characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V56

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

text: catheter

characteristic: urine/collection method


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V57

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

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text: Illumina MiSeq

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text: catheter


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V58

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: title

text: catheter


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V59

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

characteristic: organism

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text: Illumina MiSeq

text: catheter

characteristic: urine/collection method


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V60

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: catheter


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V61

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

characteristic: organism

characteristic: patient

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text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: title

text: catheter


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V62

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

text: catheter

characteristic: urine/collection method


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V63

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

characteristic: organism

characteristic: patient

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text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: catheter


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V64

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: title

text: catheter


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V65

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

characteristic: organism

characteristic: patient

characteristic: project name

characteristic: sample storage temperature

text: human urinary tract metagenome

text: Illumina MiSeq

text: catheter

characteristic: urine/collection method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V66

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: catheter


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V67

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

characteristic: organism

characteristic: patient

characteristic: project name

characteristic: sample storage temperature

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: title

text: catheter


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V68

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

text: catheter

characteristic: urine/collection method


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V69

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

characteristic: organism

characteristic: patient

characteristic: project name

characteristic: sample storage temperature

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: catheter


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V70

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: title

text: catheter


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V71

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

characteristic: organism

characteristic: patient

characteristic: project name

characteristic: sample storage temperature

text: human urinary tract metagenome

text: Illumina MiSeq

text: catheter

characteristic: urine/collection method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V72

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: catheter


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V73

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

characteristic: organism

characteristic: patient

characteristic: project name

characteristic: sample storage temperature

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: title

text: catheter


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V74

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

text: catheter

characteristic: urine/collection method


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V75

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

characteristic: organism

characteristic: patient

characteristic: project name

characteristic: sample storage temperature

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: catheter


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V76

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: title

text: catheter


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V77

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

characteristic: organism

characteristic: patient

characteristic: project name

characteristic: sample storage temperature

text: human urinary tract metagenome

text: Illumina MiSeq

text: catheter

characteristic: urine/collection method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hospital Sirio-Libanes

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urinary bladder

characteristic: broad-scale environmental context

text: not collected

characteristic: collection date

characteristic: description

text: urine

text: Brazil

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: NMIBC

text: male

text: human-associated

text: QIAseq 16S/ITS Region Panel V1V78

text: not collected

text: QIAamp DNA Microbiome

text: human urinary tract metagenome

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: catheter


text: Hospital Sirio-Libanes

text: public

text: urinary bladder

text: not collected

text: urine

characteristic: environmental medium

text: Brazil

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: NMIBC

characteristic: host disease status

text: male

characteristic: host sex

text: human-associated

characteristic: human-associated environmental package

characteristic: investigation type

text: QIAseq 16S/ITS Region Panel V1V79

characteristic: library construction method

text: not collected

characteristic: local environmental context

text: QIAamp DNA Microbiome

characteristic: nucleic acid extraction

text: human urinary tract metagenome

characteristic: organism

characteristic: patient

characteristic: project name

characteristic: sample storage temperature

text: human urinary tract metagenome

text: Illumina MiSeq

characteristic: title

text: catheter