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characteristic: host scientific name

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characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-42009451/2023

characteristic: isolate

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: SIB

text: Universität Zürich, Zürich, Switzerland

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: ZH

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6ae74/2023

characteristic: organism

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

text: HUG

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: VS

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-HUG-42184260/2023


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Laboratorio di Microbiologia, Dipartimento di Medicina di Laboratorio EOLAB, Ente Ospedaliero Cantonale, Bellinzona, Switzerland

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SIB

text: Laboratorio di Microbiologia, Istituto di Medicina di Laboratorio EOLAB, Ente Ospedaliero Cantonale, Bellinzona, Switzerland

text: Martinetti Lucchini Gladys, Valeria Spina, Gloria Gaudio

text: Switzerland

text: TI

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/TI-EOC-32_28179358/2023

characteristic: isolate

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: TI

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/TI-EOC-32_28208554/2023

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: active surveillance not initiated by an outbreak

characteristic: sample capture status


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HUG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Laboratoire de virologie, Geneva, Switzerland

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: GE

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42124313/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: GISAID Accession ID

text: HUG

characteristic: INSDC last update

text: public

text: SIB

text: Samuel Cordey, Aline Mamin, Francisco Perez, Ana Rita Goncalves, Laurent Kaiser, Lorenzo Cerutti, Cedric Howald, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

text: Switzerland

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/UN-HUG-42223926/2023

characteristic: isolate

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HUG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: LU

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/LU-SNRCI-HUG-42008715/2023

characteristic: organism

text: other

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Tree of Life Programme

characteristic: Submitter Id

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

characteristic: collected by

text: CEAB-CSIC

characteristic: collecting institution

characteristic: collection date

unit: m

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Spain

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Girona|Blanes

text: rocky bottom

characteristic: habitat

text: adult

characteristic: host life stage

text: Corticium candelabrum

characteristic: host taxid

text: Manuel Maldonado

characteristic: identified by

text: CEAB-CSIC

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: sponge metagenome

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: 37643dc4-66d0-4aa0-8bc5-e2ce1f7826f3-asg-metagenome

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

characteristic: collected by

text: CEAB-CSIC

characteristic: collecting institution

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Spain

characteristic: geographic location (country and/or sea)

text: Girona|Blanes

characteristic: geographic location (region and locality)

text: rocky bottom

text: adult

text: Corticium candelabrum

characteristic: host scientific name

text: Manuel Maldonado

text: CEAB-CSIC

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Corticium candelabrum

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Acidimicrobiales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Acidimicrobiales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

text: GTDB-TK (version 2.1.1); GTDB (release 207_v2)

characteristic: taxonomic classification

text: taxonomic classification fully defined by topology

characteristic: taxonomic identity marker

text: 18c85e05-4a69-4dd7-8a07-22db32626e57-asg-MAGScoT_cleanbin_000052

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

characteristic: collected by

text: CEAB-CSIC

characteristic: collection date

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Girona|Blanes

text: rocky bottom

characteristic: habitat

text: adult

characteristic: host life stage

text: Corticium candelabrum

characteristic: host taxid

text: Manuel Maldonado

characteristic: identified by

text: CEAB-CSIC

text: metagenome-assembled genome

text: Sponge: Corticium candelabrum

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: Dehalococcoidia bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Dehalococcoidia bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: taxonomic classification defined by topology and ANI

text: 29335d14-1347-433c-b171-c7c1ef60540d-asg-MAGScoT_cleanbin_000025


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

text: CEAB-CSIC

characteristic: collecting institution

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Spain

characteristic: geographic location (country and/or sea)

text: Girona|Blanes

characteristic: geographic location (region and locality)

text: rocky bottom

text: adult

text: Corticium candelabrum

characteristic: host scientific name

text: Manuel Maldonado

text: CEAB-CSIC

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Corticium candelabrum

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Dehalococcoidia bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Dehalococcoidia bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 77d5f051-978a-4f0e-93c2-25b1053e477c-asg-MAGScoT_cleanbin_000027

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

characteristic: collected by

text: CEAB-CSIC

characteristic: collection date

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Girona|Blanes

text: rocky bottom

characteristic: habitat

text: adult

characteristic: host life stage

text: Corticium candelabrum

characteristic: host taxid

text: Manuel Maldonado

characteristic: identified by

text: CEAB-CSIC

text: metagenome-assembled genome

text: Sponge: Corticium candelabrum

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: Dehalococcoidia bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Dehalococcoidia bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: f7a991ce-eb52-4fb3-b8e9-9b30396d4b5d-asg-MAGScoT_cleanbin_000047


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

text: CEAB-CSIC

characteristic: collecting institution

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Spain

characteristic: geographic location (country and/or sea)

text: Girona|Blanes

characteristic: geographic location (region and locality)

text: rocky bottom

text: adult

text: Corticium candelabrum

characteristic: host scientific name

text: Manuel Maldonado

text: CEAB-CSIC

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Corticium candelabrum

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Dehalococcoidia bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Dehalococcoidia bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: d5be0da7-0531-4e10-b244-d4ac7b707dae-asg-MAGScoT_cleanbin_000034

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

characteristic: collected by

text: CEAB-CSIC

characteristic: collection date

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Girona|Blanes

text: rocky bottom

characteristic: habitat

text: adult

characteristic: host life stage

text: Corticium candelabrum

characteristic: host taxid

text: Manuel Maldonado

characteristic: identified by

text: CEAB-CSIC

text: metagenome-assembled genome

text: Sponge: Corticium candelabrum

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: Dehalococcoidia bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Dehalococcoidia bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: dfa349fd-55b7-4025-96f9-cf49501d199a-asg-MAGScoT_cleanbin_000039


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

text: CEAB-CSIC

characteristic: collecting institution

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Spain

characteristic: geographic location (country and/or sea)

text: Girona|Blanes

characteristic: geographic location (region and locality)

text: rocky bottom

text: adult

text: Corticium candelabrum

characteristic: host scientific name

text: Manuel Maldonado

text: CEAB-CSIC

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Corticium candelabrum

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Alphaproteobacteria bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Alphaproteobacteria bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 0a10e726-0437-45c1-b35f-76c52ac7792d-asg-MAGScoT_cleanbin_000004

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

characteristic: collected by

text: CEAB-CSIC

characteristic: collection date

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Girona|Blanes

text: rocky bottom

characteristic: habitat

text: adult

characteristic: host life stage

text: Corticium candelabrum

characteristic: host taxid

text: Manuel Maldonado

characteristic: identified by

text: CEAB-CSIC

text: metagenome-assembled genome

text: Sponge: Corticium candelabrum

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: Gammaproteobacteria bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Gammaproteobacteria bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: 1e7803b9-0a67-4408-b10f-0a3e90a9ff9a-asg-MAGScoT_cleanbin_000032


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

text: CEAB-CSIC

characteristic: collecting institution

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Spain

characteristic: geographic location (country and/or sea)

text: Girona|Blanes

characteristic: geographic location (region and locality)

text: rocky bottom

text: adult

text: Corticium candelabrum

characteristic: host scientific name

text: Manuel Maldonado

text: CEAB-CSIC

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Corticium candelabrum

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Gammaproteobacteria bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Gammaproteobacteria bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: d37e7728-208f-48a6-99dd-eb085d12d50b-asg-MAGScoT_cleanbin_000033

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

characteristic: collected by

text: CEAB-CSIC

characteristic: collection date

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Girona|Blanes

text: rocky bottom

characteristic: habitat

text: adult

characteristic: host life stage

text: Corticium candelabrum

characteristic: host taxid

text: Manuel Maldonado

characteristic: identified by

text: CEAB-CSIC

text: metagenome-assembled genome

text: Sponge: Corticium candelabrum

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: Gammaproteobacteria bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Gammaproteobacteria bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: a140e372-9953-4c42-974b-e4a76fb95a89-asg-MAGScoT_cleanbin_000044


text: No

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

text: CEAB-CSIC

characteristic: collecting institution

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Spain

characteristic: geographic location (country and/or sea)

text: Girona|Blanes

characteristic: geographic location (region and locality)

text: rocky bottom

text: adult

text: Corticium candelabrum

characteristic: host scientific name

text: Manuel Maldonado

text: CEAB-CSIC

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Corticium candelabrum

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Gammaproteobacteria bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Gammaproteobacteria bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 6ec34625-7b55-4cdb-ac66-092e77c79b5f-asg-MAGScoT_cleanbin_000048

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

characteristic: collected by

text: CEAB-CSIC

characteristic: collection date

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Girona|Blanes

text: rocky bottom

characteristic: habitat

text: adult

characteristic: host life stage

text: Corticium candelabrum

characteristic: host taxid

text: Manuel Maldonado

characteristic: identified by

text: CEAB-CSIC

text: metagenome-assembled genome

text: Sponge: Corticium candelabrum

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: Pseudomonadales bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Pseudomonadales bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: 39ba317c-5114-4321-bbaa-00e5868c7fd5-asg-MAGScoT_cleanbin_000015


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

text: CEAB-CSIC

characteristic: collecting institution

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Spain

characteristic: geographic location (country and/or sea)

text: Girona|Blanes

characteristic: geographic location (region and locality)

text: rocky bottom

text: adult

text: Corticium candelabrum

characteristic: host scientific name

text: Manuel Maldonado

text: CEAB-CSIC

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Corticium candelabrum

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Pseudomonadales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Pseudomonadales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 4623aef4-4f81-4a64-b79b-7e3380090dd4-asg-MAGScoT_cleanbin_000051

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

characteristic: collected by

text: CEAB-CSIC

characteristic: collection date

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Girona|Blanes

text: rocky bottom

characteristic: habitat

text: adult

characteristic: host life stage

text: Corticium candelabrum

characteristic: host taxid

text: Manuel Maldonado

characteristic: identified by

text: CEAB-CSIC

text: metagenome-assembled genome

text: Sponge: Corticium candelabrum

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: Pseudomonadales bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Pseudomonadales bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: GTDB-TK (version 2.1.1); GTDB (release 207_v2)

text: ANI

text: 6cce01cc-ecec-4a7e-a634-cb3363d23e3a-asg-MAGScoT_cleanbin_000005


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

text: CEAB-CSIC

characteristic: collecting institution

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Spain

characteristic: geographic location (country and/or sea)

text: Girona|Blanes

characteristic: geographic location (region and locality)

text: rocky bottom

text: adult

text: Corticium candelabrum

characteristic: host scientific name

text: Manuel Maldonado

text: CEAB-CSIC

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Corticium candelabrum

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Spirochaetia bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Spirochaetia bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic classification defined by topology and ANI

characteristic: taxonomic identity marker

text: 8ce828e9-1b6f-4aa0-ab38-0de505a12089-asg-MAGScoT_cleanbin_000045

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

characteristic: collected by

text: CEAB-CSIC

characteristic: collection date

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Girona|Blanes

text: rocky bottom

characteristic: habitat

text: adult

characteristic: host life stage

text: Corticium candelabrum

characteristic: host taxid

text: Manuel Maldonado

characteristic: identified by

text: CEAB-CSIC

text: metagenome-assembled genome

text: Sponge: Corticium candelabrum

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: Nitrosopumilus sp.

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Nitrosopumilus sp.

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: f837b10d-fa0a-4887-b276-3e9614c5383a-asg-MAGScoT_cleanbin_000042


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

text: CEAB-CSIC

characteristic: collecting institution

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Spain

characteristic: geographic location (country and/or sea)

text: Girona|Blanes

characteristic: geographic location (region and locality)

text: rocky bottom

text: adult

text: Corticium candelabrum

characteristic: host scientific name

text: Manuel Maldonado

text: CEAB-CSIC

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Corticium candelabrum

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Bryobacterales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Bryobacterales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic novelty determined using RED

characteristic: taxonomic identity marker

text: d47adfd7-a82f-4c56-911c-b237267f53ff-asg-MAGScoT_cleanbin_000012

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

characteristic: collected by

text: CEAB-CSIC

characteristic: collection date

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Girona|Blanes

text: rocky bottom

characteristic: habitat

text: adult

characteristic: host life stage

text: Corticium candelabrum

characteristic: host taxid

text: Manuel Maldonado

characteristic: identified by

text: CEAB-CSIC

text: metagenome-assembled genome

text: Sponge: Corticium candelabrum

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: Bryobacterales bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Bryobacterales bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: 40538f42-96db-4fd0-a274-5305745f95c5-asg-MAGScoT_cleanbin_000021


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

text: CEAB-CSIC

characteristic: collecting institution

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Spain

characteristic: geographic location (country and/or sea)

text: Girona|Blanes

characteristic: geographic location (region and locality)

text: rocky bottom

text: adult

text: Corticium candelabrum

characteristic: host scientific name

text: Manuel Maldonado

text: CEAB-CSIC

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Corticium candelabrum

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Vicinamibacteria bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Vicinamibacteria bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: ANI

characteristic: taxonomic identity marker

text: 6b1ebb23-bf14-4213-9fd5-2478dc99539b-asg-MAGScoT_cleanbin_000029

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

characteristic: collected by

text: CEAB-CSIC

characteristic: collection date

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Girona|Blanes

text: rocky bottom

characteristic: habitat

text: adult

characteristic: host life stage

text: Corticium candelabrum

characteristic: host taxid

text: Manuel Maldonado

characteristic: identified by

text: CEAB-CSIC

text: metagenome-assembled genome

text: Sponge: Corticium candelabrum

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: Acidimicrobiales bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Acidimicrobiales bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: e0b2f39b-1ee3-4a0c-86de-16ff46d4126c-asg-MAGScoT_cleanbin_000017


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

text: CEAB-CSIC

characteristic: collecting institution

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Spain

characteristic: geographic location (country and/or sea)

text: Girona|Blanes

characteristic: geographic location (region and locality)

text: rocky bottom

text: adult

text: Corticium candelabrum

characteristic: host scientific name

text: Manuel Maldonado

text: CEAB-CSIC

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Corticium candelabrum

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Acidimicrobiales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Acidimicrobiales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic classification fully defined by topology

characteristic: taxonomic identity marker

text: 66a0c705-35f1-4a73-9d13-6e1e10a8c2cc-asg-MAGScoT_cleanbin_000024

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

characteristic: collected by

text: CEAB-CSIC

characteristic: collection date

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Girona|Blanes

text: rocky bottom

characteristic: habitat

text: adult

characteristic: host life stage

text: Corticium candelabrum

characteristic: host taxid

text: Manuel Maldonado

characteristic: identified by

text: CEAB-CSIC

text: metagenome-assembled genome

text: Sponge: Corticium candelabrum

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: uncultured Polaribacter sp.

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: uncultured Polaribacter sp.

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: ANI

text: 00e718fe-ce06-41ab-ac6c-83a9cb81e191-asg-MAGScoT_cleanbin_000018


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

text: CEAB-CSIC

characteristic: collecting institution

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Spain

characteristic: geographic location (country and/or sea)

text: Girona|Blanes

characteristic: geographic location (region and locality)

text: rocky bottom

text: adult

text: Corticium candelabrum

characteristic: host scientific name

text: Manuel Maldonado

text: CEAB-CSIC

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Corticium candelabrum

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Caldilineaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Caldilineaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic novelty determined using RED

characteristic: taxonomic identity marker

text: ee78b5b4-03fb-4fb3-b3ee-46148e6ffba5-asg-MAGScoT_cleanbin_000020

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

characteristic: collected by

text: CEAB-CSIC

characteristic: collection date

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Girona|Blanes

text: rocky bottom

characteristic: habitat

text: adult

characteristic: host life stage

text: Corticium candelabrum

characteristic: host taxid

text: Manuel Maldonado

characteristic: identified by

text: CEAB-CSIC

text: metagenome-assembled genome

text: Sponge: Corticium candelabrum

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: Dehalococcoidia bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Dehalococcoidia bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: c17ab466-9012-4dfd-ba8a-0af8548777ee-asg-MAGScoT_cleanbin_000037


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

text: CEAB-CSIC

characteristic: collecting institution

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Spain

characteristic: geographic location (country and/or sea)

text: Girona|Blanes

characteristic: geographic location (region and locality)

text: rocky bottom

text: adult

text: Corticium candelabrum

characteristic: host scientific name

text: Manuel Maldonado

text: CEAB-CSIC

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Corticium candelabrum

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Dehalococcoidia bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Dehalococcoidia bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic novelty determined using RED

characteristic: taxonomic identity marker

text: c007961a-0c0c-4106-a690-a869d044ef0b-asg-MAGScoT_cleanbin_000030

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

characteristic: collected by

text: CEAB-CSIC

characteristic: collection date

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Girona|Blanes

text: rocky bottom

characteristic: habitat

text: adult

characteristic: host life stage

text: Corticium candelabrum

characteristic: host taxid

text: Manuel Maldonado

characteristic: identified by

text: CEAB-CSIC

text: metagenome-assembled genome

text: Sponge: Corticium candelabrum

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: Dehalococcoidia bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Dehalococcoidia bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: GTDB-TK (version 2.1.1); GTDB (release 207_v2)

text: 7d10fddc-660b-4070-a7a7-cda0dfc66286-asg-MAGScoT_cleanbin_000043


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

text: CEAB-CSIC

characteristic: collecting institution

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Spain

characteristic: geographic location (country and/or sea)

text: Girona|Blanes

characteristic: geographic location (region and locality)

text: rocky bottom

text: adult

text: Corticium candelabrum

characteristic: host scientific name

text: Manuel Maldonado

text: CEAB-CSIC

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Corticium candelabrum

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Tepidiformaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Tepidiformaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic novelty determined using RED

characteristic: taxonomic identity marker

text: 318f1ce1-8287-4d5d-81f3-8079518f2b7d-asg-MAGScoT_cleanbin_000026

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

characteristic: collected by

text: CEAB-CSIC

characteristic: collection date

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Girona|Blanes

text: rocky bottom

characteristic: habitat

text: adult

characteristic: host life stage

text: Corticium candelabrum

characteristic: host taxid

text: Manuel Maldonado

characteristic: identified by

text: CEAB-CSIC

text: metagenome-assembled genome

text: Sponge: Corticium candelabrum

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: Dehalococcoidia bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Dehalococcoidia bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: c245f576-cd95-4824-9596-b9f38da103fa-asg-MAGScoT_cleanbin_000040


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

text: CEAB-CSIC

characteristic: collecting institution

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Spain

characteristic: geographic location (country and/or sea)

text: Girona|Blanes

characteristic: geographic location (region and locality)

text: rocky bottom

text: adult

text: Corticium candelabrum

characteristic: host scientific name

text: Manuel Maldonado

text: CEAB-CSIC

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Corticium candelabrum

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Dehalococcoidia bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Dehalococcoidia bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic novelty determined using RED

characteristic: taxonomic identity marker

text: 011820ff-db4f-427d-9a5c-38c33d059b0a-asg-MAGScoT_cleanbin_000041

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

characteristic: collected by

text: CEAB-CSIC

characteristic: collection date

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Girona|Blanes

text: rocky bottom

characteristic: habitat

text: adult

characteristic: host life stage

text: Corticium candelabrum

characteristic: host taxid

text: Manuel Maldonado

characteristic: identified by

text: CEAB-CSIC

text: metagenome-assembled genome

text: Sponge: Corticium candelabrum

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

text: Dehalococcoidia bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Dehalococcoidia bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: 0e633194-396e-4ef9-b6aa-bb83a1c841ae-asg-MAGScoT_cleanbin_000036


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: Manuel Maldonado

text: CEAB-CSIC

characteristic: collecting institution

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

text: Spain

characteristic: geographic location (country and/or sea)

text: Girona|Blanes

characteristic: geographic location (region and locality)

text: rocky bottom

text: adult

text: Corticium candelabrum

characteristic: host scientific name

text: Manuel Maldonado

text: CEAB-CSIC

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Corticium candelabrum

text: marine benthic biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Dehalococcoidia bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Dehalococcoidia bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic classification defined by topology and ANI

characteristic: taxonomic identity marker

text: 0645ce6a-a204-477d-b04f-0f5024184dab-asg-MAGScoT_cleanbin_000031

characteristic: title