characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Nutricia Research

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: human

text: feces

text: Singapore

text: intestine environment

text: Homo sapiens

text: Homo sapiens

text: Illumina MiSeq


status: PUBLIC

tag: attribute

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Nutricia Research

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:Nutricia Research

text: digestive tract environment

text: human

characteristic: common name

characteristic: description

text: feces

characteristic: environmental medium

text: Thailand

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: intestine environment

characteristic: local environmental context

text: Homo sapiens

characteristic: organism

characteristic: project name

text: Homo sapiens

text: Illumina MiSeq

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Nutricia Research

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: human

text: feces

text: Germany

text: intestine environment

text: Homo sapiens

text: Homo sapiens

text: Illumina MiSeq


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Nutricia Research

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: digestive tract environment

text: human

characteristic: common name

characteristic: description

text: feces

text: Italy

text: intestine environment

text: Homo sapiens

text: Homo sapiens

text: Illumina MiSeq


text: Nutricia Research

text: public

text: digestive tract environment

text: human

text: feces

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: intestine environment

characteristic: local environmental context

text: Homo sapiens

characteristic: organism

characteristic: project name

text: Homo sapiens

text: Illumina MiSeq


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Nutricia Research

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: digestive tract environment

text: human

text: feces

text: United Kingdom

text: intestine environment

text: Homo sapiens

text: Homo sapiens

text: Illumina MiSeq

characteristic: sequencing method

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LUND UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:LUND UNIVERSITY

text: oats

text: WG re-seq of an F2 oat mutant DNA pool of 15 plants: short kernel phenotype

text: Avena sativa

text: Avena sativa


E-MTAB-12345:Sample 1

text: COLUMBIA UNIVERSITY

text: public

text: E-MTAB-12345:Sample 1

tag: Namespace:COLUMBIA UNIVERSITY

text: 9 to 10

unit: week

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: Protocols: The skin at the nape of the neck was incised with fine dissecting scissors, and the incision rotated around the entire neck. This skin was then dissected anteriorly and completely removed, exposing the bone over the entire skull and nose. The skull was then sectioned in the coronal plane posterior to the eyes. The remnant of the brain was completely removed, leaving the anterior aspect of the skull base exposed. The most anterior point of the skull base on either side is directly posterior to the mouse nasal cavities. The remaining portion of the skull was removed to the posterior aspect of the nasal cavity. A scissor was inserted into the posterior aspect of the nasal cavity, and the suture line was incised separating one side of the septum (medially) from the maxilla (laterally). The scissor was then turned inferiorly to section the palate, and thus completely separated the septum from the lateral nasal wall. The procedure was then repeated on the other side. The remaining attachment at the nasal tip was severed and the septum completely removed. Total RNA was extracted with miRNeasy micro kit (Qiagen, 217084) according to the manufacturer’s instructions. ERCC RNA Spike-In Mix kit (ThermoFisher Scientific, 4456740) was added to normalized total RNA prior to library preparation following manufacturer’s protocol. The RNA sequencing libraries were prepared using the NEBNext Ultra II RNA Library Prep Kit for Illumina according to manufacturer’s instructions (New England Biolabs, Ipswich, MA, USA).

characteristic: description

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: nasal turbinal

characteristic: organism part

text: Mus musculus

text: female

characteristic: sex

text: BALB/c

characteristic: strain

text: Sample 1


E-MTAB-12345:Sample 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: COLUMBIA UNIVERSITY

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12345:Sample 2

characteristic: Submitter Id

text: 9 to 10

text: ArrayExpress

text: house mouse

text: adult

text: normal

text: wild type genotype

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: nasal turbinal

text: Mus musculus

text: female

text: BALB/c

text: Sample 2

characteristic: title


E-MTAB-12345:Sample 3

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: COLUMBIA UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-12345:Sample 3

text: 9 to 10

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

text: adult

text: normal

text: wild type genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: nasal turbinal

text: Mus musculus

text: female

text: BALB/c

text: Sample 3


E-MTAB-12345:Sample 4

text: COLUMBIA UNIVERSITY

text: public

text: E-MTAB-12345:Sample 4

text: 9 to 10

text: ArrayExpress

text: house mouse

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: nasal turbinal

characteristic: organism part

text: Mus musculus

text: female

text: BALB/c

text: Sample 4


E-MTAB-12345:Sample 5

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: COLUMBIA UNIVERSITY

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12345:Sample 5

characteristic: Submitter Id

text: 9 to 10

text: ArrayExpress

text: house mouse

text: adult

text: normal

text: wild type genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: nasal turbinal

text: Mus musculus

text: female

characteristic: sex

text: BALB/c

characteristic: strain

text: Sample 5


E-MTAB-12345:Sample 6

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: COLUMBIA UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-12345:Sample 6

text: 9 to 10

text: ArrayExpress

text: house mouse

text: adult

text: normal

text: wild type genotype

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: nasal turbinal

text: Mus musculus

text: female

text: BALB/c

text: Sample 6

characteristic: title


E-MTAB-12343:2 ±PJ34

text: NTU

text: public

text: E-MTAB-12343:2 ±PJ34

text: ArrayExpress

characteristic: broker name

text: myoblast

text: house mouse

characteristic: common name

text: Protocols: Collected using Trizol The murine muscle myoblast cell line C2C12 were purchased (ATCC, VA, USA) and maintained in proliferation media, composed of Dulbecco’s Modified Eagle’s Medium (DMEM) 25 mM glucose (Lonza, UK) supplemented with 10% (v/v) fetal bovine serum (FBS) (Thermo, UK) and 1% Penicillin/Streptomycin (P/S) (Thermo, UK). When cells reached 70 – 80% confluence, differentiation medium, composed of DMEM 25 mM glucose supplemented with 2% horse serum (HS) (Thermo, UK) and 1% P/S, was added to induce differentiation. Myoblasts were treated with either vehicle controls or the PARP inhibitor and PJ34 (MedChemExpress, NJ, USA) at working concentrations of 10 µM. Dexamethasone treatment conc was 1uM. Phenol-chlorofom Etoh precipitation - Column clean up NOVOGENE

characteristic: description

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

characteristic: replicate

text: Mus musculus

text: 2 ±PJ34


E-MTAB-12343:4 ±PJ34

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NTU

text: public

text: E-MTAB-12343:4 ±PJ34

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

characteristic: organism part

text: Mus musculus

text: 4 ±PJ34


E-MTAB-12343:6 ±PJ34

text: NTU

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12343:6 ±PJ34

characteristic: Submitter Id

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 6 ±PJ34


E-MTAB-12343:1 ±PJ34

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NTU

text: public

text: E-MTAB-12343:1 ±PJ34

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 1 ±PJ34


E-MTAB-12343:3 ±PJ34

text: NTU

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-12343:3 ±PJ34

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 3 ±PJ34


E-MTAB-12343:5 ±PJ34

text: NTU

characteristic: INSDC last update

text: public

text: E-MTAB-12343:5 ±PJ34

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 5 ±PJ34


E-MTAB-12343:8 ±siPARP ±DEX

text: NTU

text: public

text: E-MTAB-12343:8 ±siPARP ±DEX

text: ArrayExpress

characteristic: broker name

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 8 ±siPARP ±DEX

characteristic: title


E-MTAB-12343:7 ±siPARP

text: NTU

text: public

text: E-MTAB-12343:7 ±siPARP

text: ArrayExpress

text: myoblast

text: house mouse

characteristic: common name

characteristic: description

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 7 ±siPARP


E-MTAB-12343:9 ±siPARP ±DEX

characteristic: ENA-CHECKLIST

text: NTU

text: public

text: E-MTAB-12343:9 ±siPARP ±DEX

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

characteristic: replicate

text: Mus musculus

text: 9 ±siPARP ±DEX


E-MTAB-12343:11 ±siPARP ±DEX

characteristic: ENA-FIRST-PUBLIC

text: NTU

text: public

text: E-MTAB-12343:11 ±siPARP ±DEX

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 11 ±siPARP ±DEX


E-MTAB-12343:10 ±siPARP

text: NTU

text: public

characteristic: INSDC status

text: E-MTAB-12343:10 ±siPARP

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

characteristic: organism part

text: Mus musculus

text: 10 ±siPARP


E-MTAB-12343:12 ±siPARP ±DEX

text: NTU

text: public

characteristic: SRA accession

text: E-MTAB-12343:12 ±siPARP ±DEX

characteristic: Submitter Id

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 12 ±siPARP ±DEX


E-MTAB-12343:14 ±siPARP ±DEX

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NTU

text: public

text: E-MTAB-12343:14 ±siPARP ±DEX

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 14 ±siPARP ±DEX


E-MTAB-12343:13 ±siPARP

text: NTU

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-12343:13 ±siPARP

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 13 ±siPARP


E-MTAB-12343:15 ±siPARP ±DEX

text: NTU

characteristic: INSDC last update

text: public

text: E-MTAB-12343:15 ±siPARP ±DEX

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 15 ±siPARP ±DEX


E-MTAB-12343:17 ±siPARP ±DEX

text: NTU

text: public

text: E-MTAB-12343:17 ±siPARP ±DEX

text: ArrayExpress

characteristic: broker name

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 17 ±siPARP ±DEX

characteristic: title


E-MTAB-12343:16 ±siPARP

text: NTU

text: public

text: E-MTAB-12343:16 ±siPARP

text: ArrayExpress

text: myoblast

text: house mouse

characteristic: common name

characteristic: description

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 16 ±siPARP


E-MTAB-12343:18 ±siPARP ±DEX

characteristic: ENA-CHECKLIST

text: NTU

text: public

text: E-MTAB-12343:18 ±siPARP ±DEX

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

characteristic: replicate

text: Mus musculus

text: 18 ±siPARP ±DEX


E-MTAB-12343:20 ±siPARP ±DEX

characteristic: ENA-FIRST-PUBLIC

text: NTU

text: public

text: E-MTAB-12343:20 ±siPARP ±DEX

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 20 ±siPARP ±DEX


E-MTAB-12343:19 ±siPARP

text: NTU

text: public

characteristic: INSDC status

text: E-MTAB-12343:19 ±siPARP

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

characteristic: organism part

text: Mus musculus

text: 19 ±siPARP


E-MTAB-12343:21 ±siPARP ±DEX

text: NTU

text: public

characteristic: SRA accession

text: E-MTAB-12343:21 ±siPARP ±DEX

characteristic: Submitter Id

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 21 ±siPARP ±DEX


E-MTAB-12343:23 ±siPARP ±DEX

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NTU

text: public

text: E-MTAB-12343:23 ±siPARP ±DEX

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 23 ±siPARP ±DEX


E-MTAB-12343:22 ±siPARP

text: NTU

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-12343:22 ±siPARP

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 22 ±siPARP


E-MTAB-12343:24 ±siPARP ±DEX

text: NTU

characteristic: INSDC last update

text: public

text: E-MTAB-12343:24 ±siPARP ±DEX

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 24 ±siPARP ±DEX


E-MTAB-12343:26 ±siPARP ±DEX

text: NTU

text: public

text: E-MTAB-12343:26 ±siPARP ±DEX

text: ArrayExpress

characteristic: broker name

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 26 ±siPARP ±DEX

characteristic: title


E-MTAB-12343:25 ±siPARP

text: NTU

text: public

text: E-MTAB-12343:25 ±siPARP

text: ArrayExpress

text: myoblast

text: house mouse

characteristic: common name

characteristic: description

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 25 ±siPARP


E-MTAB-12343:27 ±siPARP ±DEX

characteristic: ENA-CHECKLIST

text: NTU

text: public

text: E-MTAB-12343:27 ±siPARP ±DEX

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

characteristic: replicate

text: Mus musculus

text: 27 ±siPARP ±DEX


E-MTAB-12343:29 ±siPARP ±DEX

characteristic: ENA-FIRST-PUBLIC

text: NTU

text: public

text: E-MTAB-12343:29 ±siPARP ±DEX

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 29 ±siPARP ±DEX


E-MTAB-12343:28 ±siPARP

text: NTU

text: public

characteristic: INSDC status

text: E-MTAB-12343:28 ±siPARP

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

characteristic: organism part

text: Mus musculus

text: 28 ±siPARP


E-MTAB-12343:30 ±siPARP ±DEX

text: NTU

text: public

characteristic: SRA accession

text: E-MTAB-12343:30 ±siPARP ±DEX

characteristic: Submitter Id

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 30 ±siPARP ±DEX


E-MTAB-12343:32 ±siPARP ±DEX

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NTU

text: public

text: E-MTAB-12343:32 ±siPARP ±DEX

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 32 ±siPARP ±DEX


E-MTAB-12343:31 ±siPARP

text: NTU

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-12343:31 ±siPARP

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 31 ±siPARP


E-MTAB-12343:33 ±siPARP ±DEX

text: NTU

characteristic: INSDC last update

text: public

text: E-MTAB-12343:33 ±siPARP ±DEX

text: ArrayExpress

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 33 ±siPARP ±DEX


E-MTAB-12343:34 ±siPARP ±DEX

text: NTU

text: public

text: E-MTAB-12343:34 ±siPARP ±DEX

text: ArrayExpress

characteristic: broker name

text: myoblast

text: house mouse

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 34 ±siPARP ±DEX

characteristic: title


E-MTAB-12343:35 ±siPARP ±DEX

text: NTU

text: public

text: E-MTAB-12343:35 ±siPARP ±DEX

text: ArrayExpress

text: myoblast

text: house mouse

characteristic: common name

characteristic: description

text: not applicable

text: Mus musculus

text: Mus musculus

text: skeletal muscle tissue

text: Mus musculus

text: 35 ±siPARP ±DEX


characteristic: ENA-CHECKLIST

text: University of Milan

text: public

tag: Namespace:University of Milan

text: Azienda Ospedaliera-Universitaria Policlinico Modena

characteristic: collecting institution

characteristic: collection date

text: Cristina Mussini

characteristic: collector name

text: nasopharyngeal swab

text: Italy

characteristic: geographic location (country and/or sea)

text: Emilia Romagna

characteristic: geographic location (region and locality)

characteristic: host age

text: Human

characteristic: host common name

text: Homo sapiens

characteristic: host scientific name

text: F

characteristic: host sex

characteristic: host subject id

text: Severe acute respiratory syndrome coronavirus 2


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CGR

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: horse

text: Old horse sample 1

text: Equus caballus

text: Equus caballus

text: Old horse sample 1


characteristic: ENA-CHECKLIST

text: CGR

text: public

text: horse

characteristic: common name

text: Old horse sample 2

characteristic: description

text: Equus caballus

characteristic: organism

text: Equus caballus

text: Old horse sample 2

characteristic: title


text: CGR

text: public

text: horse

text: Old horse sample 3

text: Equus caballus

text: Equus caballus

text: Old horse sample 3


text: CGR

text: public

text: horse

text: Old horse sample 4

text: Equus caballus

text: Equus caballus

text: Old horse sample 4


text: CGR

text: public

text: horse

text: Young horse sample 1

text: Equus caballus

text: Equus caballus

text: Young horse sample 1


text: CGR

text: public

text: horse

text: Young horse sample 2

text: Equus caballus

text: Equus caballus

text: Young horse sample 2


text: CGR

text: public

text: horse

text: Young horse sample 3

text: Equus caballus

text: Equus caballus

text: Young horse sample 3


text: CGR

text: public

text: horse

text: Young horse sample 4

text: Equus caballus

text: Equus caballus

text: Young horse sample 4


text: NTNU University Museum

text: public

tag: Namespace:NTNU University Museum

text: Norway

characteristic: geographic location (country and/or sea)

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: F

characteristic: sex

text: platyrhynchus

text: tissue


text: NTNU University Museum

text: public

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: M

text: platyrhynchus

text: tissue


text: NTNU University Museum

text: public

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: unknown

text: platyrhynchus

text: unknown


text: NTNU University Museum

text: public

text: MLM 71

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: M

text: platyrhynchus

text: tissue


text: NTNU University Museum

text: public

text: BP 1

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: M

text: platyrhynchus

text: tissue


text: NTNU University Museum

text: public

text: MLM 99

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: M

text: platyrhynchus

text: tissue


text: NTNU University Museum

text: public

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: unknown

text: platyrhynchus

text: tissue


text: NTNU University Museum

text: public

text: MLM 4

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: M

text: platyrhynchus

text: bone


text: NTNU University Museum

text: public

text: MLM 13

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: unknown

text: platyrhynchus

text: Antler


text: NTNU University Museum

text: public

text: MB 34

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: unknown

text: platyrhynchus

text: Antler


text: NTNU University Museum

text: public

text: MB 29

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: unknown

text: platyrhynchus

text: Antler


text: NTNU University Museum

text: public

text: MLM 23b

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: M

text: platyrhynchus

text: Antler


text: NTNU University Museum

text: public

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: unknown

text: platyrhynchus

text: Antler


text: NTNU University Museum

text: public

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: F

text: platyrhynchus

text: Antler


text: NTNU University Museum

text: public

text: BBH 8

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: F

text: platyrhynchus

text: antler


text: NTNU University Museum

text: public

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: unknown

text: platyrhynchus

text: bone


text: NTNU University Museum

text: public

text: MB 101

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: F

text: platyrhynchus

text: tissue


text: NTNU University Museum

text: public

text: MLM 108

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: F

text: platyrhynchus

text: tissue


text: NTNU University Museum

text: public

text: MLM 109

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: F

text: platyrhynchus

text: tissue


text: NTNU University Museum

text: public

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: M

text: platyrhynchus

text: tissue


text: NTNU University Museum

text: public

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: F

text: platyrhynchus

text: tissue


text: NTNU University Museum

text: public

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: M

text: platyrhynchus

text: Antler


text: NTNU University Museum

text: public

text: MB 88

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: unknown

text: platyrhynchus

text: tissue


text: NTNU University Museum

text: public

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: unknown

text: platyrhynchus

text: tissue


text: NTNU University Museum

text: public

text: MLM 104

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

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text: platyrhynchus

text: Antler


text: NTNU University Museum

text: public

text: MLM 105

text: Norway

text: Rangifer tarandus platyrhyncus

text: Rangifer tarandus platyrhyncus

text: unknown

text: platyrhynchus

text: Antler


text: Anopheles gambiae

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: African malaria mosquito

text: Anopheles gambiae

text: Anopheles gambiae


text: Anopheles funestus

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: African malaria mosquito

text: Anopheles funestus

text: Anopheles funestus


name: SAMIN0000095-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

characteristic: ENA-LAST-UPDATE

text: public

tag: Namespace:Dr. Surinder S. Banga, Punjab Agricultural University, Ludhiana, India

text: IBDC

characteristic: broker name

characteristic: cultivar

text: Study succeeded in generating of genomic resources and novel information for candidate genes influencing variation for key life history and productivity traits in Indian mustard

text: Punjab, India

characteristic: geographic location (region and locality)

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000096-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

characteristic: External Id

text: Dr. Surinder S. Banga, Punjab Agricultural University, Ludhiana, India

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: IBDC

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


characteristic: ENA-CHECKLIST

text: Indian Institute of Technology, Delhi

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Indian Institute of Technology, Delhi

characteristic: Submitter Id

text: IBDC

text: Uropathogen causing community acquired UTI

text: India

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: isolate

characteristic: isolate

text: Urine

text: Escherichia coli

text: Escherichia coli


name: SAMIN0000097-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

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text: IBDC

characteristic: common name

characteristic: description

text: Punjab, India

text: Brassica juncea

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text: Brassica juncea

text: leaf

characteristic: title


name: SAMIN0000098-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: IBDC

characteristic: broker name

characteristic: cultivar

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000099-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: IBDC

text: Punjab, India

characteristic: geographic location (region and locality)

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000102-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

characteristic: ENA-CHECKLIST

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: IBDC

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

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name: SAMIN0000101-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

text: public

characteristic: Submitter Id

text: IBDC

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000103- Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

text: public

text: IBDC

characteristic: common name

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000104-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

text: public

text: IBDC

characteristic: description

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000105-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

text: public

text: IBDC

text: Punjab, India

text: Brassica juncea

characteristic: organism

text: Brassica juncea

text: leaf


name: SAMIN0000107-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

text: public

text: IBDC

text: ALBELI

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf

characteristic: title


name: SAMIN0000119-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

characteristic: ENA-FIRST-PUBLIC

text: public

text: IBDC

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000106-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

characteristic: ENA-LAST-UPDATE

text: public

text: IBDC

text: KRANTI

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000116-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

text: public

text: IBDC

characteristic: broker name

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000122-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

text: public

text: IBDC

characteristic: cultivar

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000123-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

characteristic: External Id

text: public

text: IBDC

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000124-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

characteristic: INSDC center name

text: public

tag: Namespace:Study succeeded in generating of genomic resources and novel information for candidate genes influencing variation for key life history and productivity traits in Indian mustard

text: IBDC

text: Punjab, Ludhiana

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000125-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

characteristic: INSDC first public

text: public

text: IBDC

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000126-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

text: public

text: IBDC

text: Punjab, India

characteristic: geographic location (region and locality)

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000131-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

characteristic: ENA-CHECKLIST

text: public

text: IBDC

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000128-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

characteristic: INSDC last update

text: public

text: IBDC

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000127-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

text: public

characteristic: INSDC status

text: IBDC

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000129-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

text: public

characteristic: SRA accession

text: IBDC

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000132-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

text: public

characteristic: Submitter Id

text: IBDC

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000130-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

text: public

text: IBDC

characteristic: common name

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000134-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

text: public

text: IBDC

characteristic: description

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000133-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

text: public

text: IBDC

text: Punjab, India

text: Brassica juncea

characteristic: organism

text: Brassica juncea

text: leaf


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text: public

text: IBDC

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf

characteristic: title


name: SAMIN0000115-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

characteristic: ENA-FIRST-PUBLIC

text: public

text: IBDC

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000114-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

characteristic: ENA-LAST-UPDATE

text: public

text: IBDC

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000111-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

text: public

text: IBDC

characteristic: broker name

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000112-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

text: public

text: IBDC

characteristic: cultivar

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000113-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

characteristic: External Id

text: public

text: IBDC

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000120-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

characteristic: INSDC center name

text: public

text: IBDC

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000118-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

characteristic: INSDC first public

text: public

text: IBDC

text: Punjab, India

text: Brassica juncea

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text: leaf


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text: public

text: IBDC

text: Punjab, India

characteristic: geographic location (region and locality)

text: Brassica juncea

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text: leaf


name: SAMIN0000141-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

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text: public

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text: Punjab, India

text: Brassica juncea

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characteristic: INSDC last update

text: public

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text: Punjab, India

text: Brassica juncea

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text: public

characteristic: INSDC status

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text: public

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text: Brassica juncea

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text: public

characteristic: Submitter Id

text: IBDC

text: Punjab, India

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text: Brassica juncea

text: leaf


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text: public

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characteristic: common name

text: Punjab, India

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text: public

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text: public

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text: public

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characteristic: broker name

text: Punjab, India

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text: Punjab, India

text: Brassica juncea

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text: Punjab, India

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text: Punjab, India

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text: public

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characteristic: geographic location (region and locality)

text: Brassica juncea

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name: SAMIN0000150-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

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text: public

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characteristic: INSDC last update

text: public

text: IBDC

text: Punjab, India

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text: public

characteristic: INSDC status

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text: Punjab, India

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name: SAMIN0000149-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

text: public

characteristic: SRA accession

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text: Brassica juncea

text: leaf


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characteristic: Submitter Id

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name: SAMIN0000151-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

text: public

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characteristic: common name

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text: public

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characteristic: description

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name: SAMIN0000163-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

text: public

text: IBDC

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text: Brassica juncea

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name: SAMIN0000164-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

text: public

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text: Brassica juncea

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text: leaf

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characteristic: ENA-FIRST-PUBLIC

text: public

text: IBDC

text: Punjab, India

text: Brassica juncea

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characteristic: ENA-LAST-UPDATE

text: public

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text: leaf


name: SAMIN0000160-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

text: public

text: IBDC

characteristic: broker name

text: Punjab, India

text: Brassica juncea

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text: leaf


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text: public

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characteristic: cultivar

text: Punjab, India

text: Brassica juncea

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text: leaf


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characteristic: External Id

text: public

text: IBDC

text: Punjab, India

text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000162-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

characteristic: INSDC center name

text: public

text: IBDC

text: GIRIRAJ

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text: Brassica juncea

text: Brassica juncea

text: leaf


name: SAMIN0000157-Creating a fully characterized genetic resource pipeline for mustard improvement programme in India

characteristic: INSDC first public

text: public

text: IBDC

text: VARDAAN

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text: Brassica juncea

text: Brassica juncea

text: leaf


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text: public

text: IBDC

text: Punjab, India

characteristic: geographic location (region and locality)

text: Brassica juncea

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text: leaf


characteristic: ENA-CHECKLIST

text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: Source.Group: Livestock; Source.Subgroup: Cattle; Source.comment: NA

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: host health state

characteristic: isolate

text: Faeces/Manure

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characteristic: serovar

text: STEC


text: NORWEGIAN VETERINARY INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Czech Republic

text: not applicable

text: Meat

text: Escherichia coli

text: Escherichia coli

text: STEC


characteristic: ENA-FIRST-PUBLIC

text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: Source.Group: Livestock; Source.Subgroup: Pig; Source.comment: NA

characteristic: description

text: Czech Republic

text: not applicable

text: Meat

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: STEC

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: Source.Group: Livestock; Source.Subgroup: Pig; Source.comment: rectal swab

text: Czech Republic

text: not applicable

text: Other

text: Escherichia coli

text: Escherichia coli

text: STEC


characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:WASHINGTON UNIVERSITY CENTER FOR GENOME SCIENCES

text: metagenome

text: metagenome

text: human fecal sample


characteristic: ENA-CHECKLIST

text: WASHINGTON UNIVERSITY CENTER FOR GENOME SCIENCES

text: public

text: metagenome

text: metagenome

text: human fecal sample


text: UNIVERSITY OF WATERLOO

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tag: Namespace:UNIVERSITY OF WATERLOO

text: location 7, depth 0.1 m, 1st replicate

text: roaster and flotation tailings

characteristic: environment (feature)

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characteristic: geographic location (country and/or sea)

text: metagenome

characteristic: investigation type

text: miscellaneous natural or artificial environment

characteristic: miscellaneous environmental package

text: mine tailings metagenome

text: Giant Mine 2018

characteristic: project name

text: mine tailings metagenome

text: Illumina MiSeq

characteristic: sequencing method


text: UNIVERSITY OF WATERLOO

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: location 7, depth 0.1 m, 2nd replicate

text: roaster and flotation tailings

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text: metagenome

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text: Giant Mine 2018

text: mine tailings metagenome

text: Illumina MiSeq


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF WATERLOO

text: public

characteristic: Submitter Id

text: location 7, depth 0.64 m, 1st replicate

characteristic: description

text: roaster and flotation tailings

text: Canada

text: metagenome

text: mine tailings metagenome

text: Giant Mine 2018

text: mine tailings metagenome

text: Illumina MiSeq


characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF WATERLOO

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E-MTAB-12429:Sample 10

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: SRA accession

text: E-MTAB-12429:Sample 10

tag: Namespace:Department of Microbiology and Molecular GeneticsIMRIC, Faculty of Medicine, The Hebrew University of Jerusalem

text: ArrayExpress

characteristic: broker name

text: Protocols: Cultures ofE. coliMG1655 were grown at 37°C in either rich LB medium or minimal E medium pH 7.019supplied with 0.4% glucose (EG medium). At OD600of ~0.4the cells were collected. Total RNA was extracted, using TRI-reagent Term-seq libraries were constructed according to Dar et al., 2016, with slight changes. 1 μg of DNase treated total RNA was ligated to a 3' barcoded adapter (150 pmole) using T4 RNA ligase 1, in a 20 μl reaction at 22°C. Ligation reaction was arrested after two hours11by addition of 60 μl RLT buffer (Qiagen). The adapter ligated RNA samples were pooled together and cleaned-up using the Zymo Clean and ConcentratorTM-5 kit. The RNA was then fragmented using Ambion Fragmentation Reagent (Ambion AM8740),and cleaned-up using 2.5 volumes of RNAClean XP beads (Beckman-Coulter) and 1.5 volumes of isopropanol, according to manufacturer instructions. The RNA was depleted of ribosomal RNA using Ribo-Zero, cleaned-up using 2.5 volumes of RNAClean XP beads (Beckman-Coulter) and 1.5 volumes of isopropanol and then used for cDNA synthesis using Invitrogen SuperScript™ III First-Strand Synthesis System.The cDNA was cleaned-uptwice with 1.5 volumes of Ampure XP (Beckman-Coulter) and amplified by 9 cycles of PCR.

text: exponential phase

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: minimal E medium

characteristic: growth condition

text: not applicable

characteristic: isolate

text: Escherichia coli str. K-12 substr. MG1655

text: whole organism

characteristic: organism part

text: Sample 10


E-MTAB-12429:Sample 11

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Department of Microbiology and Molecular GeneticsIMRIC, Faculty of Medicine, The Hebrew University of Jerusalem

characteristic: INSDC center name

text: public

text: E-MTAB-12429:Sample 11

characteristic: Submitter Id

text: ArrayExpress

text: exponential phase

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text: minimal E medium

text: not applicable

characteristic: organism

text: whole organism

text: Sample 11

characteristic: title


E-MTAB-12429:Sample 12

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12429:Sample 12

text: ArrayExpress

characteristic: description

text: exponential phase

text: wild type genotype

text: minimal E medium

text: not applicable

text: whole organism

text: Sample 12


E-MTAB-12429:Sample 7

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: SRA accession

text: E-MTAB-12429:Sample 7

text: ArrayExpress

characteristic: broker name

text: Protocols: Cultures ofE. coliMG1655 were grown at 37°C in either rich LB medium or minimal E medium pH 7.019supplied with 0.4% glucose (EG medium). At OD600of ~0.4the cells were collected. Total RNA was extracted, using TRI-reagent RNAtag-seq libraries were constructed as described in (Melamed et al., 2018). The cDNA was cleaned-uptwice with 1.5 volumes of Ampure XP (Beckman-Coulter) and amplified by 9 cycles of PCR.

text: exponential phase

text: wild type genotype

text: minimal E medium

text: not applicable

text: whole organism

text: Sample 7


E-MTAB-12429:Sample 8

text: public

text: E-MTAB-12429:Sample 8

text: ArrayExpress

text: exponential phase

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: minimal E medium

characteristic: growth condition

text: not applicable

text: whole organism

text: Sample 8


E-MTAB-12429:Sample 9

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text: public

text: E-MTAB-12429:Sample 9

text: ArrayExpress

text: exponential phase

text: wild type genotype

text: minimal E medium

text: not applicable

characteristic: isolate

text: whole organism

characteristic: organism part

text: Sample 9


E-MTAB-12429:Sample 1

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characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-12429:Sample 1

text: ArrayExpress

text: exponential phase

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text: rich LB medium

text: not applicable

text: whole organism

text: Sample 1


E-MTAB-12429:Sample 2

text: public

text: E-MTAB-12429:Sample 2

characteristic: Submitter Id

text: ArrayExpress

text: exponential phase

text: wild type genotype

text: rich LB medium

text: not applicable

characteristic: organism

text: whole organism

text: Sample 2

characteristic: title


E-MTAB-12429:Sample 3

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12429:Sample 3

text: ArrayExpress

text: exponential phase

text: wild type genotype

text: rich LB medium

text: not applicable

text: whole organism

text: Sample 3


E-MTAB-12429:Sample 4

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: SRA accession

text: E-MTAB-12429:Sample 4

text: ArrayExpress

characteristic: description

text: exponential phase

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text: not applicable

text: whole organism

text: Sample 4


E-MTAB-12429:Sample 5

text: public

text: E-MTAB-12429:Sample 5

text: ArrayExpress

characteristic: broker name

text: exponential phase

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characteristic: genotype

text: rich LB medium

text: not applicable

text: whole organism

text: Sample 5


E-MTAB-12429:Sample 6

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-12429:Sample 6

text: ArrayExpress

text: exponential phase

text: wild type genotype

text: rich LB medium

characteristic: growth condition

text: not applicable

characteristic: isolate

text: whole organism

text: Sample 6


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:453-9324

tag: Namespace:University Medical Center Hamburg-Eppendorf

characteristic: collection date

text: Germany

characteristic: geographic location (country and/or sea)

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa


text: University Medical Center Hamburg-Eppendorf

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:453-9325

characteristic: Submitter Id

text: Germany

text: Pseudomonas aeruginosa

characteristic: organism

text: Pseudomonas aeruginosa

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:453-9326

text: Germany

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa


text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:453-9327

text: Germany

text: Staphylococcus aureus

text: Staphylococcus aureus


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:453-9328

text: Germany

text: Staphylococcus aureus

text: Staphylococcus aureus


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:453-9329

text: Germany

text: Staphylococcus aureus

text: Staphylococcus aureus


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:453-9330

text: Germany

text: Stenotrophomonas maltophilia

text: Stenotrophomonas maltophilia


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:453-9331

text: Germany

text: Stenotrophomonas maltophilia

text: Stenotrophomonas maltophilia


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:453-9332

text: Germany

text: Stenotrophomonas maltophilia

text: Stenotrophomonas maltophilia


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:453-9333

text: metagenome

text: metagenome


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:453-9334

text: metagenome

text: metagenome


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:453-9335

text: metagenome

text: metagenome


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:453-9336

text: metagenome

text: metagenome


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:454-9337

text: metagenome

text: metagenome


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:454-9338

text: metagenome

text: metagenome


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:454-9339

text: metagenome

text: metagenome


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:454-9340

text: metagenome

text: metagenome


text: University Medical Center Hamburg-Eppendorf

text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:454-9341

text: metagenome

text: metagenome


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:454-9342

text: metagenome

text: metagenome


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:454-9343

text: metagenome

text: metagenome


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:454-9344

text: metagenome

text: metagenome


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:454-9345

text: metagenome

text: metagenome


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:454-9346

text: metagenome

text: metagenome


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:454-9347

text: metagenome

text: metagenome


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:454-9348

text: metagenome

text: metagenome


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:454-9349

text: metagenome

text: metagenome


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:454-9350

text: metagenome

text: metagenome


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:454-9351

text: metagenome

text: metagenome


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:454-9352

text: metagenome

text: metagenome


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:454-9353

text: metagenome

text: metagenome


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:454-9354

text: Germany

text: Stenotrophomonas maltophilia

text: Stenotrophomonas maltophilia


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:454-9355

text: Germany

text: Stenotrophomonas maltophilia

text: Stenotrophomonas maltophilia


text: public

text: ena-SAMPLE-TAB-25-11-2022-13:16:43:454-9356

text: Germany

text: Stenotrophomonas maltophilia

text: Stenotrophomonas maltophilia


text: Shanghai Tenth People's Hospital

text: public

tag: Namespace:Shanghai Tenth People's Hospital

text: ArrayExpress

characteristic: broker name

text: benomyl

characteristic: compound

text: Protocols: Strains were maintained at -80˚C. Strains were streaked on YPD plates. The plates were incubated at 37˚C overnight. Then several colonies were picked up and suspended in DDW. Cell density was adjusted to 10,000 cells/ml, then 100µl of cell suspension was plated on YPD plates. The plates were incubated at 37˚C overnight. Colonies were picked up and suspended in DDW, then cell pellets were obtained by centrifuging at highest speed for 1min. We used the phenol-chloroform method to extract Genomic DNA. Cell pellets were suspended in 200µl of lysis buffer, add 100µl of acid washed glass beads, and 0,2ml phenol:chloroform:isoamyl alcohol (25:24:1). Vortex for 30min at 4˚C. Add 200µl TE pH7.5. Centrifuge for 5min at maximum speed. Transfer aqueous layer to a new 1.5ml EP tube. Add 1ml 100% ethanol. Precipitate 1h at -20˚C. Pellet DNA by centrifuging for 10min at maximum speed. Discard the supernatant. Add 400µl TE pH 7.5. Add 3ul of RNase A (10mg/ml). Incubate at 37˚C for 30min. Add 10µl of 3M NaOAc and 1ml of 100% ethanol. Mix by inversion. Precipitate 30min at -20˚C. Pellet DNA by centrifuging for 10min at maximum speed. Discard supernatant. Air-dry the pellet overnight. Resuspend in 50µl water. 1µg Genomic DNA was randomly fragmented by Covaris, followed by fragments selection by Agencourt AMPure XP-Medium kit to an average size of 200~400 bp. Selected fragments were end repaired and 3\"adenylate, then the adaptors were ligated to the end of these 3\"adenylate fragments. The products were amplified by PCR and purified by the Agencourt AMPure XP-Medium kit. The purified double stranded PCR products were heat denatured to single strand, then circularised by the splint oligo sequence. The single strand circle DNA (ssCirDNA) were formatted as the final library and qualified by QC.

characteristic: description

unit: microgram per milliliter

characteristic: dose

text: wild type genotype

characteristic: genotype

text: YPD broth

text: not applicable

text: wild type karyotype

characteristic: karyotype

text: Cryptococcus neoformans var. grubii H99

text: Cryptococcus neoformans var. grubii H99

text: whole organism

characteristic: organism part

text: Cryptococcus neoformans var. grubii H99

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Shanghai Tenth People's Hospital

characteristic: INSDC center name

text: public

text: ArrayExpress

text: benomyl

text: YPD broth

characteristic: growth condition

text: not applicable

characteristic: isolate

text: aneuploid

text: Cryptococcus neoformans var. grubii H99

text: Cryptococcus neoformans var. grubii H99

text: whole organism

text: Cryptococcus neoformans var. grubii H99


text: Plasmodium falciparum

characteristic: ArrayExpress-SPECIES

characteristic: ENA-FIRST-PUBLIC

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: malaria parasite P. falciparum

characteristic: common name

text: Plasmodium falciparum

characteristic: organism

text: Plasmodium falciparum

characteristic: title


text: THE ROSLIN INSTITUTE

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:THE ROSLIN INSTITUTE

text: horse

text: Overlapping paired reads

characteristic: description

text: Equus caballus

text: Equus caballus


characteristic: ENA-CHECKLIST

text: QIB

text: public

text: Frozen faeces

text: Quadram Institute Bioscience

characteristic: broker name

text: human

text: Diagnosed with IBS and severe ME/CFS

text: Yes

text: Homo sapiens

text: Homo sapiens

text: F

characteristic: sex

text: VLP-enriched virome


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: QIB

characteristic: INSDC center name

text: public

text: Frozen faeces

text: Quadram Institute Bioscience

text: human

text: same household healthy controls (SHHC)

text: Yes

text: Homo sapiens

text: Homo sapiens

text: M

text: VLP-enriched virome


text: QIB

text: public

text: Frozen faeces

text: Quadram Institute Bioscience

text: human

text: same household healthy controls (SHHC)

text: Yes

text: Homo sapiens

text: Homo sapiens

text: F

text: VLP-enriched virome


text: QIB

text: public

text: Frozen faeces

text: Quadram Institute Bioscience

text: human

text: Severe ME/CFS

text: Yes

text: Homo sapiens

text: Homo sapiens

text: F

text: VLP-enriched virome


text: QIB

text: public

text: Buffer only

text: Quadram Institute Bioscience

text: Buffer solution

text: Yes

text: blank sample

text: blank sample

text: VLP-enriched virome


text: Shanghai Tenth People's Hospital

text: public

text: ArrayExpress

text: azoxystrobin

characteristic: compound

characteristic: dose

characteristic: genotype

text: YPD plate

characteristic: growth condition

text: not applicable

characteristic: isolate

text: Cryptococcus neoformans var. grubii H99

text: Cryptococcus neoformans var. grubii H99

text: whole organism

characteristic: organism part

text: Cryptococcus neoformans var. grubii H99

characteristic: strain


characteristic: ENA-FIRST-PUBLIC

text: QIB

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: Submitter Id

text: Frozen faeces

text: Quadram Institute Bioscience

text: human

characteristic: common name

text: Diagnosed with IBS and severe ME/CFS

text: Yes

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: F

text: Bulk whole metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: QIB

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Frozen faeces

text: Quadram Institute Bioscience

characteristic: broker name

text: human

text: same household healthy controls (SHHC)

characteristic: description

text: Yes

text: Homo sapiens

text: Homo sapiens

text: M

characteristic: sex

text: Bulk whole metagenome


characteristic: External Id

text: QIB

characteristic: INSDC center name

text: public

text: Frozen faeces

text: Quadram Institute Bioscience

text: human

text: same household healthy controls (SHHC)

text: Yes

text: Homo sapiens

text: Homo sapiens

text: F

text: Bulk whole metagenome


text: QIB

text: public

text: Frozen faeces

text: Quadram Institute Bioscience

text: human

text: Severe ME/CFS

text: Yes

text: Homo sapiens

text: Homo sapiens

text: F

text: Bulk whole metagenome


text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:780-28332

tag: Namespace:October University for Modern Sciences and Arts

characteristic: collection date

text: Clinical isolate

text: Egypt

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Acinetobacter baumannii 20Y0020

characteristic: isolate

text: Endotracheal tube

text: Acinetobacter baumannii

text: Acinetobacter baumannii

characteristic: serovar

characteristic: strain


characteristic: ENA-FIRST-PUBLIC

text: October University for Modern Sciences and Arts

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:780-28333

characteristic: Submitter Id

text: Clinical isolate

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0021

text: Blood

text: Acinetobacter baumannii

characteristic: organism

text: Acinetobacter baumannii

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:781-28334

text: Clinical isolate

characteristic: description

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0022

text: Endotracheal tube

text: Acinetobacter baumannii

text: Acinetobacter baumannii


characteristic: External Id

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:781-28335

characteristic: collection date

text: Clinical isolate

text: Egypt

characteristic: geographic location (country and/or sea)

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0023

text: Wound swab

text: Acinetobacter baumannii

text: Acinetobacter baumannii


text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:781-28336

text: Clinical isolate

text: Egypt

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Acinetobacter baumannii 20Y0024

characteristic: isolate

text: Endotracheal tube

text: Acinetobacter baumannii

text: Acinetobacter baumannii


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:781-28337

text: Clinical isolate

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0025

text: Catheter tip

text: Acinetobacter baumannii

text: Acinetobacter baumannii

characteristic: strain


characteristic: INSDC last update

text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:781-28338

characteristic: Submitter Id

text: Clinical isolate

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0026

text: Wound swab

text: Acinetobacter baumannii

characteristic: organism

text: Acinetobacter baumannii


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:781-28340

text: Clinical isolate

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0028

text: Blood

text: Acinetobacter baumannii

text: Acinetobacter baumannii

characteristic: title


text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:781-28342

text: Clinical isolate

characteristic: description

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0030

text: Catheter tip

text: Acinetobacter baumannii

text: Acinetobacter baumannii


characteristic: External Id

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:781-28343

characteristic: collection date

text: Clinical isolate

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0031

text: Endotracheal tube

text: Acinetobacter baumannii

text: Acinetobacter baumannii


text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:781-28344

text: Clinical isolate

text: Egypt

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Acinetobacter baumannii 20Y0032

text: Sputum

text: Acinetobacter baumannii

text: Acinetobacter baumannii


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:781-28345

text: Clinical isolate

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0033

characteristic: isolate

text: Endotracheal tube

text: Acinetobacter baumannii

text: Acinetobacter baumannii


characteristic: INSDC last update

text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:781-28347

characteristic: Submitter Id

text: Clinical isolate

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0035

text: sputum

text: Acinetobacter baumannii

text: Acinetobacter baumannii

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:781-28348

text: Clinical isolate

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0036

text: Catheter tip

text: Acinetobacter baumannii

characteristic: organism

text: Acinetobacter baumannii


text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:781-28349

text: Clinical isolate

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0037

text: sputum

text: Acinetobacter baumannii

text: Acinetobacter baumannii

characteristic: title


characteristic: External Id

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:781-28350

text: Clinical isolate

characteristic: description

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0038

text: Blood

text: Acinetobacter baumannii

text: Acinetobacter baumannii


text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:782-28351

characteristic: collection date

text: Clinical isolate

text: Egypt

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo sapiens

text: Acinetobacter baumannii 20Y0039

text: Endotracheal tube

text: Acinetobacter baumannii

text: Acinetobacter baumannii


characteristic: ENA-FIRST-PUBLIC

text: October University for Modern Sciences and Arts

characteristic: INSDC first public

text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:782-28352

text: Clinical isolate

text: Egypt

text: diseased

text: Homo sapiens

characteristic: host scientific name

text: Acinetobacter baumannii 20Y0040

text: Wound swab

text: Acinetobacter baumannii

text: Acinetobacter baumannii


characteristic: INSDC last update

text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:782-28353

characteristic: Submitter Id

text: Clinical isolate

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0041

characteristic: isolate

text: Sputum

text: Acinetobacter baumannii

text: Acinetobacter baumannii


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:782-28354

text: Clinical isolate

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0042

text: Endotracheal tube

text: Acinetobacter baumannii

text: Acinetobacter baumannii

characteristic: strain


text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:782-28355

text: Clinical isolate

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0043

text: Wound swab

text: Acinetobacter baumannii

characteristic: organism

text: Acinetobacter baumannii


characteristic: External Id

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:782-28356

text: Clinical isolate

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0045

text: Sputum

text: Acinetobacter baumannii

text: Acinetobacter baumannii

characteristic: title


text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:782-28357

characteristic: collection date

text: Clinical isolate

characteristic: description

text: Egypt

characteristic: geographic location (country and/or sea)

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0046

text: Endotracheal tube

text: Acinetobacter baumannii

text: Acinetobacter baumannii


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:782-28359

text: Clinical isolate

text: Egypt

text: diseased

characteristic: host health state

text: Homo sapiens

text: Acinetobacter baumannii 20Y0048

text: Blood

text: Acinetobacter baumannii

text: Acinetobacter baumannii


characteristic: INSDC last update

text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:782-28363

characteristic: Submitter Id

text: Clinical isolate

text: Egypt

text: diseased

text: Homo sapiens

characteristic: host scientific name

text: Acinetobacter baumannii 20Y0054

text: Blood

text: Acinetobacter baumannii

text: Acinetobacter baumannii


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:782-28364

text: Clinical isolate

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0055

characteristic: isolate

text: Blood

text: Acinetobacter baumannii

text: Acinetobacter baumannii


text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:783-28365

text: Clinical isolate

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0056

text: Blood

text: Acinetobacter baumannii

text: Acinetobacter baumannii

characteristic: strain


characteristic: External Id

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:783-28366

text: Clinical isolate

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0057

text: Blood

text: Acinetobacter baumannii

characteristic: organism

text: Acinetobacter baumannii


text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:783-28367

characteristic: collection date

text: Clinical isolate

characteristic: description

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0058

text: Sputum

text: Acinetobacter baumannii

text: Acinetobacter baumannii

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:783-28368

text: Clinical isolate

text: Egypt

characteristic: geographic location (country and/or sea)

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0059

text: Blood

text: Acinetobacter baumannii

text: Acinetobacter baumannii


characteristic: INSDC last update

text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:783-28369

characteristic: Submitter Id

text: Clinical isolate

text: Egypt

text: diseased

characteristic: host health state

text: Homo sapiens

text: Acinetobacter baumannii 20Y0060

text: Blood

text: Acinetobacter baumannii

text: Acinetobacter baumannii


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:783-28370

text: Clinical isolate

text: Egypt

text: diseased

text: Homo sapiens

characteristic: host scientific name

text: Acinetobacter baumannii 20Y0062

text: Blood

text: Acinetobacter baumannii

text: Acinetobacter baumannii


text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:783-28371

text: Clinical isolate

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0063

characteristic: isolate

text: Blood

text: Acinetobacter baumannii

text: Acinetobacter baumannii


characteristic: External Id

text: October University for Modern Sciences and Arts

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:783-28374

text: Clinical isolate

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0066

text: Blood

text: Acinetobacter baumannii

text: Acinetobacter baumannii

characteristic: strain


text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:783-28375

characteristic: collection date

text: Clinical isolate

characteristic: description

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0067

text: Blood

text: Acinetobacter baumannii

characteristic: organism

text: Acinetobacter baumannii


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC first public

text: public

text: ena-SAMPLE-TAB-02-12-2022-09:25:35:783-28376

text: Clinical isolate

text: Egypt

text: diseased

text: Homo sapiens

text: Acinetobacter baumannii 20Y0068

text: Blood

text: Acinetobacter baumannii

text: Acinetobacter baumannii

characteristic: title