characteristic: ENA-FIRST-PUBLIC

text: Amsterdam University Medical Centres

characteristic: INSDC first public

text: public

text: digestive tract

characteristic: collection date

text: human

text: Placebo day 2 WGS

text: fecal matter

characteristic: environmental medium

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: intestine

text: Homo sapiens

text: Homo sapiens

text: gut sample of 56 yo male


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Amsterdam University Medical Centres

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Amsterdam University Medical Centres

characteristic: Submitter Id

text: digestive tract

characteristic: broad-scale environmental context

text: human

characteristic: common name

text: Placebo day 42 WGS

characteristic: description

text: fecal matter

text: Netherlands

unit: DD

characteristic: geographic location (longitude)

text: intestine

characteristic: local environmental context

text: Homo sapiens

characteristic: organism

text: Sterile faecal filtrate transplantation alters phage-microbe dynamics in individuals with metabolic syndrome

characteristic: project name

text: Homo sapiens

text: gut sample of 56 yo male

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: Amsterdam University Medical Centres

characteristic: INSDC first public

text: public

text: digestive tract

characteristic: collection date

text: human

text: Placebo day 4 WGS

text: fecal matter

characteristic: environmental medium

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: intestine

text: Homo sapiens

text: Homo sapiens

text: gut sample of 56 yo male


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Amsterdam University Medical Centres

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: digestive tract

text: human

text: Placebo day 7 WGS

text: fecal matter

text: Netherlands

text: intestine

text: Homo sapiens

text: Homo sapiens

text: gut sample of 56 yo male


text: Amsterdam University Medical Centres

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: digestive tract

characteristic: broad-scale environmental context

text: human

characteristic: common name

text: Placebo day 28 VLP

characteristic: description

text: fecal matter

text: Netherlands

characteristic: geographic location (longitude)

text: intestine

text: Homo sapiens

text: Homo sapiens

text: gut sample of 56 yo male


characteristic: ENA-FIRST-PUBLIC

text: Amsterdam University Medical Centres

characteristic: INSDC first public

text: public

text: digestive tract

text: human

text: Placebo day 0 VLP

text: fecal matter

text: Netherlands

text: intestine

characteristic: local environmental context

text: Homo sapiens

characteristic: organism

characteristic: project name

text: Homo sapiens

text: gut sample of 21 yo male

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: Amsterdam University Medical Centres

text: public

text: digestive tract

characteristic: collection date

text: human

text: Placebo day 28 VLP

text: fecal matter

characteristic: environmental medium

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: intestine

text: Homo sapiens

text: Homo sapiens

text: gut sample of 21 yo male


E-MTAB-12778:Donor A CAR

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12778:Donor A CAR

tag: Namespace:Massachusetts General Hospital Harvard Medical School Broad Institute

characteristic: Submitter Id

unit: year

characteristic: age

text: ArrayExpress

characteristic: broker name

text: T cell

text: human

text: Protocols: CAR T cells were generated from PBMCs of healthy donors under IL7&IL15 supplementation. Retroviral transduction with CAR and CAR.CCR7 was performed at day 3&4 respectively after 48 hrs of plate-bound (CD3/CD28) activation. Cells were cultured until day 10 and either cultured over night with or without Jeko1 co-culture. Cells were enriched at an AriaFusion cell sorter by using the fluorescent reporter mTurquoise that is incorporated in the vector backbone. Cells were sorted into a 15mL conical tube with 5mL fully supplemented medium, spun down at 400xg for 5 min. and directly processed for mRNA Seq RNA was harvested using the Uneasy Micro Kit from Qiagen strictly following the manufacturers instructions. All steps were performed on ice and on an RNAse free bench Illumina TruSeq stranded RNA was used to generate libraries. All libraries were generated with 1µg total input RNA per sample

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: monoculture

characteristic: growth condition

text: A

characteristic: individual

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: T cell

characteristic: organism part

text: Homo sapiens

text: male

characteristic: sex

text: Donor A CAR


E-MTAB-12778:Donor A CAR cocultured

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Massachusetts General Hospital Harvard Medical School Broad Institute

characteristic: INSDC first public

text: public

text: E-MTAB-12778:Donor A CAR cocultured

text: ArrayExpress

text: T cell

text: human

characteristic: common name

characteristic: description

text: normal

text: wild type genotype

text: coculture with Jeko1 cells

text: A

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: T cell

text: Homo sapiens

text: male

text: Donor A CAR cocultured

characteristic: title


E-MTAB-12778:Donor A CAR.CCR7

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12778:Donor A CAR.CCR7

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: T cell

text: human

text: normal

text: monoculture

text: A

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: T cell

text: Homo sapiens

text: male

text: Donor A CAR.CCR7


name: E-MTAB-12778:Donor A CAR.CCR7 cocultured

text: public

text: ArrayExpress

characteristic: broker name

text: T cell

text: human

text: normal

characteristic: disease

characteristic: genotype

text: coculture with Jeko1 cells

characteristic: growth condition

text: A

characteristic: individual

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: T cell

characteristic: organism part

text: Homo sapiens

text: male

text: Donor A CAR.CCR7 cocultured


E-MTAB-12778:Donor B CAR

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC first public

text: public

text: E-MTAB-12778:Donor B CAR

text: ArrayExpress

text: T cell

text: human

characteristic: common name

characteristic: description

text: normal

text: wild type genotype

text: monoculture

text: B

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: T cell

text: Homo sapiens

text: female

characteristic: sex

text: Donor B CAR


E-MTAB-12778:Donor B CAR cocultured

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12778:Donor B CAR cocultured

text: ArrayExpress

text: T cell

text: human

text: normal

text: wild type genotype

text: coculture with Jeko1 cells

text: B

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: T cell

text: Homo sapiens

text: female

text: Donor B CAR cocultured

characteristic: title


E-MTAB-12778:Donor B CAR.CCR7

text: public

text: E-MTAB-12778:Donor B CAR.CCR7

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: T cell

text: human

text: normal

characteristic: disease

characteristic: genotype

text: monoculture

characteristic: growth condition

text: B

characteristic: individual

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: T cell

text: Homo sapiens

text: female

text: Donor B CAR.CCR7


name: E-MTAB-12778:Donor B CAR.CCR7 cocultured

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC first public

text: public

text: ArrayExpress

text: T cell

text: human

characteristic: common name

text: normal

text: coculture with Jeko1 cells

text: B

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: T cell

characteristic: organism part

text: Homo sapiens

text: female

text: Donor B CAR.CCR7 cocultured


E-MTAB-12778:Donor C CAR

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12778:Donor C CAR

text: ArrayExpress

text: T cell

text: human

characteristic: description

text: normal

text: wild type genotype

text: monoculture

text: C

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: T cell

text: Homo sapiens

text: male

characteristic: sex

text: Donor C CAR


E-MTAB-12778:Donor C CAR cocultured

text: public

text: E-MTAB-12778:Donor C CAR cocultured

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: T cell

text: human

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: coculture with Jeko1 cells

text: C

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: T cell

text: Homo sapiens

text: male

text: Donor C CAR cocultured

characteristic: title


E-MTAB-12778:Donor C CAR.CCR7

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC first public

text: public

text: E-MTAB-12778:Donor C CAR.CCR7

text: ArrayExpress

text: T cell

text: human

characteristic: common name

text: normal

text: monoculture

characteristic: growth condition

text: C

characteristic: individual

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: T cell

text: Homo sapiens

text: male

text: Donor C CAR.CCR7


name: E-MTAB-12778:Donor C CAR.CCR7 cocultured

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: T cell

text: human

text: normal

text: coculture with Jeko1 cells

text: C

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: T cell

characteristic: organism part

text: Homo sapiens

text: male

text: Donor C CAR.CCR7 cocultured


text: InteRNA Technologies BV

text: public

tag: Namespace:InteRNA Technologies BV

characteristic: Submitter Id

text: human

text: RNA extracted from A2058 cells transfected with mock

characteristic: description

text: Homo sapiens

text: Homo sapiens

text: A2058 Mock


text: InteRNA Technologies BV

text: public

text: human

text: RNA extracted from A2058 cells transfected with 10 nM 5A2

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: A2058 5A2

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: InteRNA Technologies BV

text: public

text: human

text: RNA extracted from A549 cells transfected with mock

text: Homo sapiens

text: Homo sapiens

text: A549 Mock


characteristic: ENA-LAST-UPDATE

text: InteRNA Technologies BV

characteristic: INSDC first public

text: public

text: human

text: RNA extracted from A549 cells transfected with 10 nM 5A2

text: Homo sapiens

text: Homo sapiens

text: A549 5A2


text: InteRNA Technologies BV

text: public

text: human

characteristic: common name

text: RNA extracted from BT549 cells transfected with mock

text: Homo sapiens

text: Homo sapiens

text: BT549 Mock


text: InteRNA Technologies BV

text: public

text: human

text: RNA extracted from BT549 cells transfected with 10 nM 5A2

text: Homo sapiens

text: Homo sapiens

text: BT549 5A2


text: InteRNA Technologies BV

text: public

text: human

text: RNA extracted from H460 cells transfected with mock

text: Homo sapiens

text: Homo sapiens

text: H460 Mock


text: InteRNA Technologies BV

text: public

text: human

text: RNA extracted from H460 cells transfected with 10 nM 5A2

text: Homo sapiens

text: Homo sapiens

text: H460 5A2


text: InteRNA Technologies BV

text: public

text: human

text: RNA extracted from HEP3B cells transfected with mock

text: Homo sapiens

text: Homo sapiens

text: HEP3B Mock


text: InteRNA Technologies BV

text: public

text: human

text: RNA extracted from HEP3B cells transfected with 10 nM 5A2

text: Homo sapiens

text: Homo sapiens

text: HEP3B 5A2


text: InteRNA Technologies BV

text: public

text: human

text: RNA extracted from HUH7 cells transfected with mock

text: Homo sapiens

text: Homo sapiens

text: HUH7 Mock


text: InteRNA Technologies BV

text: public

text: human

text: RNA extracted from HUH7 cells transfected with 10 nM 5A2

text: Homo sapiens

text: Homo sapiens

text: HUH7 5A2


text: Medizinische Hochschule Hannover

text: public

text: ena-SAMPLE-TAB-22-03-2023-10:29:37:682-149139

text: RKI, Nordufer 20, 13353 Berlin, Germany

characteristic: collecting institution

text: Sindy B�ttcher

characteristic: collector name

text: stool

text: Germany

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

characteristic: host subject id

text: Human mastadenovirus D

text: Human mastadenovirus D


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:713-194058

tag: Namespace:Instituto de Ciencias de la Vid y del Vino (ICVV)

characteristic: Submitter Id

text: Carolina Royo and Pablo Carbonell-Bejerano

text: wine grape

text: Garnacha Blanca

characteristic: cultivar

text: Flesh of Garnacha Blanca berries at prematurity replicate 1

text: prematurity

text: Spain

characteristic: geographic location (country and-or sea)

text: Logrono, La Rioja

characteristic: geographic location (region and locality)

text: Vitis vinifera

text: Vitis vinifera

text: flesh


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Instituto de Ciencias de la Vid y del Vino (ICVV)

characteristic: INSDC first public

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:713-194059

text: wine grape

characteristic: common name

text: Garnacha Blanca

text: Flesh of Garnacha Blanca berries at prematurity replicate 2

characteristic: description

text: prematurity

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

characteristic: organism

text: Vitis vinifera

text: flesh

characteristic: title


characteristic: External Id

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:713-194060

text: wine grape

text: Garnacha Blanca

text: Flesh of Garnacha Blanca berries at prematurity replicate 3

text: prematurity

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:713-194062

text: wine grape

text: Garnacha Blanca

text: Flesh of Garnacha Blanca berries at preveraison replicate 2

text: hard green

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


characteristic: INSDC last update

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:713-194063

text: wine grape

text: Garnacha Blanca

text: Flesh of Garnacha Blanca berries at preveraison replicate 3

text: hard green

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:713-194064

text: wine grape

text: Garnacha Blanca

text: Flesh of Garnacha Blanca berries at veraison replicate 1

text: veraison

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:713-194065

text: wine grape

text: Garnacha Blanca

text: Flesh of Garnacha Blanca berries at veraison replicate 2

text: veraison

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:713-194066

characteristic: Submitter Id

text: wine grape

text: Garnacha Blanca

text: Flesh of Garnacha Blanca berries at veraison replicate 3

text: veraison

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:714-194067

text: Carolina Royo and Pablo Carbonell-Bejerano

text: wine grape

text: Garnacha Tinta

characteristic: cultivar

text: Flesh of Garnacha Tinta berries at prematurity replicate 1

text: prematurity

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


text: Instituto de Ciencias de la Vid y del Vino (ICVV)

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:714-194068

text: wine grape

text: Garnacha Tinta

text: Flesh of Garnacha Tinta berries at prematurity replicate 2

text: prematurity

text: Spain

characteristic: geographic location (country and-or sea)

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:714-194069

text: wine grape

text: Garnacha Tinta

text: Flesh of Garnacha Tinta berries at prematurity replicate 3

text: prematurity

text: Spain

text: Logrono, La Rioja

characteristic: geographic location (region and locality)

text: Vitis vinifera

text: Vitis vinifera

text: flesh


characteristic: ENA-CHECKLIST

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:714-194070

text: wine grape

text: Garnacha Tinta

text: Flesh of Garnacha Tinta berries at preveraison replicate 1

text: hard green

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


characteristic: ENA-FIRST-PUBLIC

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:714-194071

text: wine grape

text: Garnacha Tinta

text: Flesh of Garnacha Tinta berries at preveraison replicate 2

text: hard green

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


characteristic: ENA-LAST-UPDATE

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:714-194072

text: wine grape

text: Garnacha Tinta

text: Flesh of Garnacha Tinta berries at preveraison replicate 3

text: hard green

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


characteristic: INSDC first public

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:714-194073

text: wine grape

text: Garnacha Tinta

text: Flesh of Garnacha Tinta berries at veraison replicate 1

text: veraison

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:714-194074

text: wine grape

characteristic: common name

text: Garnacha Tinta

text: Flesh of Garnacha Tinta berries at veraison replicate 2

text: veraison

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:714-194075

text: Carolina Royo and Pablo Carbonell-Bejerano

text: wine grape

text: Garnacha Tinta

text: Flesh of Garnacha Tinta berries at veraison replicate 3

characteristic: description

text: veraison

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


text: Instituto de Ciencias de la Vid y del Vino (ICVV)

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:714-194076

text: wine grape

text: Tempranillo Blanco

text: Flesh of Tempranillo Blanco berries at prematurity replicate 1

text: prematurity

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

characteristic: organism

text: Vitis vinifera

text: flesh


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:714-194077

text: wine grape

text: Tempranillo Blanco

text: Flesh of Tempranillo Blanco berries at prematurity replicate 2

text: prematurity

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh

characteristic: title


characteristic: External Id

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:715-194078

text: wine grape

text: Tempranillo Blanco

text: Flesh of Tempranillo Blanco berries at prematurity replicate 3

text: prematurity

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:715-194079

text: wine grape

text: Tempranillo Blanco

text: Flesh of Tempranillo Blanco berries at preveraison replicate 1

text: hard green

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


characteristic: INSDC last update

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:715-194080

text: wine grape

text: Tempranillo Blanco

text: Flesh of Tempranillo Blanco berries at preveraison replicate 2

text: hard green

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:715-194081

text: wine grape

text: Tempranillo Blanco

text: Flesh of Tempranillo Blanco berries at preveraison replicate 3

text: hard green

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:715-194082

text: wine grape

text: Tempranillo Blanco

text: Flesh of Tempranillo Blanco berries at veraison replicate 1

text: veraison

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:715-194083

characteristic: Submitter Id

text: Carolina Royo and Pablo Carbonell-Bejerano

text: wine grape

text: Tempranillo Blanco

text: Flesh of Tempranillo Blanco berries at veraison replicate 2

text: veraison

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


text: Instituto de Ciencias de la Vid y del Vino (ICVV)

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:715-194084

text: wine grape

text: Tempranillo Blanco

characteristic: cultivar

text: Flesh of Tempranillo Blanco berries at veraison replicate 3

text: veraison

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:715-194085

text: wine grape

text: Tempranillo Tinto

text: Flesh of Tempranillo Tinto berries at prematurity replicate 1

text: prematurity

text: Spain

characteristic: geographic location (country and-or sea)

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:716-194086

text: wine grape

text: Tempranillo Tinto

text: Flesh of Tempranillo Tinto berries at prematurity replicate 2

text: prematurity

text: Spain

text: Logrono, La Rioja

characteristic: geographic location (region and locality)

text: Vitis vinifera

text: Vitis vinifera

text: flesh


characteristic: ENA-CHECKLIST

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:716-194087

text: wine grape

text: Tempranillo Tinto

text: Flesh of Tempranillo Tinto berries at prematurity replicate 3

text: prematurity

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


characteristic: ENA-FIRST-PUBLIC

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:716-194088

text: wine grape

text: Tempranillo Tinto

text: Flesh of Tempranillo Tinto berries at preveraison replicate 1

text: hard green

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


characteristic: ENA-LAST-UPDATE

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:716-194089

text: wine grape

text: Tempranillo Tinto

text: Flesh of Tempranillo Tinto berries at preveraison replicate 2

text: hard green

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


characteristic: INSDC first public

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:716-194090

text: wine grape

text: Tempranillo Tinto

text: Flesh of Tempranillo Tinto berries at preveraison replicate 3

text: hard green

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:716-194091

text: Carolina Royo and Pablo Carbonell-Bejerano

text: wine grape

characteristic: common name

text: Tempranillo Tinto

text: Flesh of Tempranillo Tinto berries at veraison replicate 1

text: veraison

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


text: Instituto de Ciencias de la Vid y del Vino (ICVV)

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:716-194092

text: wine grape

text: Tempranillo Tinto

text: Flesh of Tempranillo Tinto berries at veraison replicate 2

characteristic: description

text: veraison

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: flesh


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:716-194093

text: wine grape

text: Tempranillo Tinto

text: Flesh of Tempranillo Tinto berries at veraison replicate 3

text: veraison

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

characteristic: organism

text: Vitis vinifera

text: flesh


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:716-194094

text: wine grape

text: Garnacha Blanca

text: Skin of Garnacha Blanca berries at prematurity replicate 1

text: prematurity

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin

characteristic: title


characteristic: External Id

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:716-194095

text: wine grape

text: Garnacha Blanca

text: Skin of Garnacha Blanca berries at prematurity replicate 2

text: prematurity

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:716-194096

text: wine grape

text: Garnacha Blanca

text: Skin of Garnacha Blanca berries at prematurity replicate 3

text: prematurity

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


characteristic: INSDC last update

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:716-194097

text: wine grape

text: Garnacha Blanca

text: Skin of Garnacha Blanca berries at preveraison replicate 1

text: hard green

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:716-194098

text: wine grape

text: Garnacha Blanca

text: Skin of Garnacha Blanca berries at preveraison replicate 2

text: hard green

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:716-194099

text: Carolina Royo and Pablo Carbonell-Bejerano

text: wine grape

text: Garnacha Blanca

text: Skin of Garnacha Blanca berries at preveraison replicate 3

text: hard green

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


text: Instituto de Ciencias de la Vid y del Vino (ICVV)

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:717-194100

characteristic: Submitter Id

text: wine grape

text: Garnacha Blanca

text: Skin of Garnacha Blanca berries at veraison replicate 1

text: veraison

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:717-194101

text: wine grape

text: Garnacha Blanca

characteristic: cultivar

text: Skin of Garnacha Blanca berries at veraison replicate 2

text: veraison

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:717-194102

text: wine grape

text: Garnacha Blanca

text: Skin of Garnacha Blanca berries at veraison replicate 3

text: veraison

text: Spain

characteristic: geographic location (country and-or sea)

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:717-194103

text: wine grape

text: Garnacha Tinta

text: Skin of Garnacha Tinta berries at prematurity replicate 1

text: prematurity

text: Spain

text: Logrono, La Rioja

characteristic: geographic location (region and locality)

text: Vitis vinifera

text: Vitis vinifera

text: skin


characteristic: ENA-CHECKLIST

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:717-194104

text: wine grape

text: Garnacha Tinta

text: Skin of Garnacha Tinta berries at prematurity replicate 2

text: prematurity

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


characteristic: ENA-FIRST-PUBLIC

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:717-194105

text: wine grape

text: Garnacha Tinta

text: Skin of Garnacha Tinta berries at prematurity replicate 3

text: prematurity

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


characteristic: ENA-LAST-UPDATE

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:717-194106

text: wine grape

text: Garnacha Tinta

text: Skin of Garnacha Tinta berries at preveraison replicate 1

text: hard green

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


characteristic: INSDC first public

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:717-194107

text: Carolina Royo and Pablo Carbonell-Bejerano

text: wine grape

text: Garnacha Tinta

text: Skin of Garnacha Tinta berries at preveraison replicate 2

text: hard green

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


text: Instituto de Ciencias de la Vid y del Vino (ICVV)

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:717-194108

text: wine grape

characteristic: common name

text: Garnacha Tinta

text: Skin of Garnacha Tinta berries at preveraison replicate 3

text: hard green

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:717-194109

text: wine grape

text: Garnacha Tinta

text: Skin of Garnacha Tinta berries at veraison replicate 1

characteristic: description

text: veraison

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:717-194110

text: wine grape

text: Garnacha Tinta

text: Skin of Garnacha Tinta berries at veraison replicate 2

text: veraison

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

characteristic: organism

text: Vitis vinifera

text: skin


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:717-194111

text: wine grape

text: Garnacha Tinta

text: Skin of Garnacha Tinta berries at veraison replicate 3

text: veraison

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin

characteristic: title


characteristic: External Id

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:717-194112

text: wine grape

text: Tempranillo Blanco

text: Skin of Tempranillo Blanco berries at prematurity replicate 1

text: prematurity

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:717-194113

text: wine grape

text: Tempranillo Blanco

text: Skin of Tempranillo Blanco berries at prematurity replicate 2

text: prematurity

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


characteristic: INSDC last update

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:717-194114

text: wine grape

text: Tempranillo Blanco

text: Skin of Tempranillo Blanco berries at prematurity replicate 3

text: prematurity

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:718-194115

text: Carolina Royo and Pablo Carbonell-Bejerano

text: wine grape

text: Tempranillo Blanco

text: Skin of Tempranillo Blanco berries at preveraison replicate 1

text: hard green

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


text: Instituto de Ciencias de la Vid y del Vino (ICVV)

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:718-194116

text: wine grape

text: Tempranillo Blanco

text: Skin of Tempranillo Blanco berries at preveraison replicate 2

text: hard green

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:718-194117

characteristic: Submitter Id

text: wine grape

text: Tempranillo Blanco

text: Skin of Tempranillo Blanco berries at preveraison replicate 3

text: hard green

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:718-194118

text: wine grape

text: Tempranillo Blanco

characteristic: cultivar

text: Skin of Tempranillo Blanco berries at veraison replicate 1

text: veraison

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:718-194119

text: wine grape

text: Tempranillo Blanco

text: Skin of Tempranillo Blanco berries at veraison replicate 2

text: veraison

text: Spain

characteristic: geographic location (country and-or sea)

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:718-194120

text: wine grape

text: Tempranillo Blanco

text: Skin of Tempranillo Blanco berries at veraison replicate 3

text: veraison

text: Spain

text: Logrono, La Rioja

characteristic: geographic location (region and locality)

text: Vitis vinifera

text: Vitis vinifera

text: skin


characteristic: ENA-CHECKLIST

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:718-194121

text: wine grape

text: Tempranillo Tinto

text: Skin of Tempranillo Tinto berries at prematurity replicate 1

text: prematurity

text: Spain

text: Logroo, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


characteristic: ENA-FIRST-PUBLIC

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:718-194122

text: wine grape

text: Tempranillo Tinto

text: Skin of Tempranillo Tinto berries at prematurity replicate 2

text: prematurity

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


characteristic: ENA-LAST-UPDATE

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:718-194123

text: Carolina Royo and Pablo Carbonell-Bejerano

text: wine grape

text: Tempranillo Tinto

text: Skin of Tempranillo Tinto berries at prematurity replicate 3

text: prematurity

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


text: Instituto de Ciencias de la Vid y del Vino (ICVV)

characteristic: INSDC first public

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:718-194124

text: wine grape

text: Tempranillo Tinto

text: Skin of Tempranillo Tinto berries at preveraison replicate 1

text: hard green

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:718-194125

text: wine grape

characteristic: common name

text: Tempranillo Tinto

text: Skin of Tempranillo Tinto berries at preveraison replicate 2

text: hard green

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:718-194126

text: wine grape

text: Tempranillo Tinto

text: Skin of Tempranillo Tinto berries at preveraison replicate 3

characteristic: description

text: hard green

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:718-194127

text: wine grape

text: Tempranillo Tinto

text: Skin of Tempranillo Tinto berries at veraison replicate 1

text: veraison

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

characteristic: organism

text: Vitis vinifera

text: skin


text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:718-194128

text: wine grape

text: Tempranillo Tinto

text: Skin of Tempranillo Tinto berries at veraison replicate 2

text: veraison

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin

characteristic: title


characteristic: External Id

text: public

text: ena-SAMPLE-TAB-22-03-2023-16:37:36:718-194129

text: wine grape

text: Tempranillo Tinto

text: Skin of Tempranillo Tinto berries at veraison replicate 3

text: veraison

text: Spain

text: Logrono, La Rioja

text: Vitis vinifera

text: Vitis vinifera

text: skin


text: Anopheles gambiae

characteristic: ArrayExpress-SPECIES

text: SC

characteristic: INSDC center name

text: public

text: African malaria mosquito

text: Anopheles gambiae

text: Anopheles gambiae


text: HUG

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: cardiovascular system

characteristic: broad-scale environmental context

characteristic: collection date

text: Human prosthetic valve swab suspension

text: mitral valve

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: heart

characteristic: local environmental context

text: metagenome

characteristic: project name

text: metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: JIC

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: thale cress

characteristic: common name

text: seedlings leaves of Col-0 wild tpye were collected after 14 days of growth from MS plates. Total RNA was isolated using the Qiagen kit.

text: Arabidopsis thaliana

text: Arabidopsis thaliana


characteristic: External Id

text: JIC

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: thale cress

text: leave of Col-0 wild type were collected from seedlings tissue after 14 days of growth on MS plates. The leave was then trimmed into 1mm strips and processed for protoplast isolation immediately.

characteristic: description

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

characteristic: title


text: JIC

text: public

characteristic: INSDC status

text: thale cress

text: 14-day-old seedlings were inoculated with water. The leaves were collected and processed for protoplasts at 24 hpi. The dissociated cells as protoplasts were immediately loaded into 10x genomics. the dual index was used for library construction.

text: Arabidopsis thaliana

text: Arabidopsis thaliana


text: JIC

text: public

text: thale cress

text: 14-day-old seedlings were inoculated with water. The leaves were collected and processed for protoplasts at 40 hpi. The dissociated cells as protoplasts were immediately loaded into 10x genomics. the dual index was used for library construction.

text: Arabidopsis thaliana

text: Arabidopsis thaliana


text: JIC

text: public

text: thale cress

text: 14-day-old seedlings were inoculated with a conidial suspension of Colletotrichum higginsianum. The leaves were collected and processed for protoplasts at 24 hpi. The dissociated cells as protoplasts were immediately loaded into 10x genomics. the dual index was used for library construction.

text: Arabidopsis thaliana

text: Arabidopsis thaliana


text: JIC

text: public

text: thale cress

text: 14-day-old seedlings were inoculated with a conidial suspension of Colletotrichum higginsianum. The leaves were collected and processed for protoplasts at 40 hpi. The dissociated cells as protoplasts were immediately loaded into 10x genomics. the dual index was used for library construction.

text: Arabidopsis thaliana

text: Arabidopsis thaliana


text: Plasmodium falciparum

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum


text: LAVAL UNIVERSITY

text: public

tag: Namespace:LAVAL UNIVERSITY

text: SADI HF

text: rat

characteristic: environment (biome)

text: gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: rat gut metagenome

text: rat gut metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: Hypoabsorptive surgeries cause limb-dependent changes in the gut endocannabinoidome and microbiome in association with beneficial metabolic effects


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LAVAL UNIVERSITY

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SHAM HF-PW

text: rat

text: gut

text: feces

text: Canada

text: host-associated

text: metagenome

text: rat gut metagenome

characteristic: project name

text: rat gut metagenome

text: Illumina MiSeq


text: LAVAL UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: BPD/DS HF

characteristic: description

text: rat

characteristic: environment (biome)

text: gut

text: feces

text: Canada

text: host-associated

text: metagenome

text: rat gut metagenome

characteristic: organism

text: rat gut metagenome

text: Illumina MiSeq

characteristic: title


text: LAVAL UNIVERSITY

text: public

text: SHAM HF

text: rat

text: gut

characteristic: environment (feature)

text: feces

characteristic: environment (material)

text: Canada

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: host-associated

characteristic: host-associated environmental package

text: metagenome

characteristic: investigation type

text: rat gut metagenome

text: rat gut metagenome

text: Illumina MiSeq


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIAB

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: bread wheat

characteristic: common name

text: Alchemy

characteristic: cultivar

text: Sequencing and chromosome pseudomolecule assembly of the eight founders of the NIAB Elite MAGIC population; cultivars Alchemy, Brompton, Claire, Hereward, Rialto, Robigus, Soissons and Xi19

text: United Kingdom

text: Triticum aestivum

text: Triticum aestivum

text: Winter

text: Leaf

text: Triticum aestivum Alchemy assembly of NIAB_Elite MAGIC founder


characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Gustave Roussy Cancer Campus, Villejuif Cedex, France

characteristic: Submitter Id

text: 6 to 7

unit: week

characteristic: age

text: ArrayExpress

characteristic: broker name

text: NSCLC patient A

characteristic: cohort

text: house mouse

text: Protocols: This study aimed to analyze changes in gut microbiota composition in mice after transplantation of fecal microbiota (FMT) from the feces of NSCLC patients by analyzing fecal content using 16S rRNA sequencing, 10 days after transplantation. Specific-pathogen-free (SPF) mice were used for each experiments (N=4) as controls. Feces were collected post-FMT. 16S Ribosomal RNA Gene Amplicons for the Illumina MiSeq System, standard manufacturer's protocol

characteristic: description

text: fecal microbiota transplantation

characteristic: growth condition

text: not applicable

characteristic: isolate

text: Mus musculus

characteristic: organism

text: Mus musculus

text: feces

characteristic: organism part

text: Mus musculus

text: female

characteristic: sex

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Gustave Roussy Cancer Campus, Villejuif Cedex, France

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: 6 to 7

text: ArrayExpress

text: NSCLC patient A

text: house mouse

text: fecal microbiota transplantation

text: not applicable

text: Mus musculus

text: Mus musculus

text: feces

text: Mus musculus

text: female

characteristic: title


characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: 6 to 7

characteristic: age

text: ArrayExpress

text: NSCLC patient B

text: house mouse

characteristic: common name

text: fecal microbiota transplantation

text: not applicable

text: Mus musculus

text: Mus musculus

text: feces

text: Mus musculus

text: female


text: public

text: 6 to 7

text: ArrayExpress

characteristic: broker name

text: NSCLC patient C

characteristic: cohort

text: house mouse

characteristic: description

text: fecal microbiota transplantation

characteristic: growth condition

text: not applicable

characteristic: isolate

text: Mus musculus

characteristic: organism

text: Mus musculus

text: feces

text: Mus musculus

text: female


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: 6 to 7

text: ArrayExpress

text: NSCLC patient D

text: house mouse

text: fecal microbiota transplantation

text: not applicable

text: Mus musculus

text: Mus musculus

text: feces

characteristic: organism part

text: Mus musculus

text: female

characteristic: sex

characteristic: strain


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: 6 to 7

text: ArrayExpress

text: NSCLC patient E

text: house mouse

text: fecal microbiota transplantation

text: not applicable

text: Mus musculus

text: Mus musculus

text: feces

text: Mus musculus

text: female

characteristic: title


text: public

characteristic: INSDC status

characteristic: Submitter Id

text: 6 to 7

characteristic: age

text: ArrayExpress

characteristic: broker name

text: NSCLC patient F

characteristic: cohort

text: house mouse

characteristic: common name

text: fecal microbiota transplantation

text: not applicable

text: Mus musculus

text: Mus musculus

text: feces

text: Mus musculus

text: female


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: 6 to 7

text: ArrayExpress

text: house mouse

characteristic: description

text: specific pathogen free

characteristic: growth condition

text: not applicable

characteristic: isolate

text: Mus musculus

characteristic: organism

text: Mus musculus

text: feces

text: Mus musculus

text: female


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MSc.

characteristic: INSDC center name

text: public

text: ArrayExpress

text: human

text: Protocols: cell lines were trypsinized and pelleted after they become confluent. Genomic DNA isolation was performed using GeneJET Genomic DNA isolation kit (ThermoFisher, U.S.A.) according to manufacturer’s recommendations. Library preparation protocol is based on two rounds of PCR to amplify the integrated barcodes from the genomic DNA and carried out according to manufacturer’s guidelines provided by the Cellecta.

text: adult

characteristic: developmental stage

text: colorectal adenocarcinoma

characteristic: disease

text: clonetracker lentiviral barcode library

characteristic: genotype

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: colon

characteristic: organism part

text: Homo sapiens


text: MSc.

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12818:Caco2-RepB-Medium(1st Time Point)

characteristic: Submitter Id

text: ArrayExpress

text: human

text: adult

text: colorectal adenocarcinoma

text: clonetracker lentiviral barcode library

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: colon

text: Homo sapiens

text: Caco2-RepB-Medium(1st Time Point)

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: MSc.

text: public

text: E-MTAB-12818:Caco2-RepB-Medium(2nd Time Point)

text: ArrayExpress

characteristic: broker name

text: human

characteristic: common name

characteristic: description

text: adult

text: colorectal adenocarcinoma

text: clonetracker lentiviral barcode library

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: colon

text: Homo sapiens

text: Caco2-RepB-Medium(2nd Time Point)


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MSc.

text: public

text: E-MTAB-12818:Caco2-RepB-Medium(3rd Time Point)

text: ArrayExpress

text: human

text: adult

text: colorectal adenocarcinoma

text: clonetracker lentiviral barcode library

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: colon

text: Homo sapiens

text: Caco2-RepB-Medium(3rd Time Point)


text: MSc.

characteristic: INSDC center name

text: public

text: E-MTAB-12818:Caco2-RepB-Medium(4th Time Point)

text: ArrayExpress

text: human

text: adult

characteristic: developmental stage

text: colorectal adenocarcinoma

characteristic: disease

text: clonetracker lentiviral barcode library

characteristic: genotype

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: colon

text: Homo sapiens

text: Caco2-RepB-Medium(4th Time Point)


text: MSc.

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12818:Caco2-RepB-Medium(5th Time Point)

text: ArrayExpress

text: human

text: adult

text: colorectal adenocarcinoma

text: clonetracker lentiviral barcode library

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: colon

characteristic: organism part

text: Homo sapiens

text: Caco2-RepB-Medium(5th Time Point)


name: E-MTAB-12818:HT29-RepB-Medium (2nd Time Point)

characteristic: ENA-CHECKLIST

text: MSc.

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: human

text: adult

text: colorectal adenocarcinoma

text: clonetracker lentiviral barcode library

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: colon

text: Homo sapiens

text: HT29-RepB-Medium (2nd Time Point)

characteristic: title


name: E-MTAB-12818:HT29-RepB-Medium (3rd Time Point)

characteristic: ENA-FIRST-PUBLIC

text: MSc.

text: public

text: ArrayExpress

characteristic: broker name

text: human

characteristic: common name

characteristic: description

text: adult

text: colorectal adenocarcinoma

text: clonetracker lentiviral barcode library

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: colon

text: Homo sapiens

text: HT29-RepB-Medium (3rd Time Point)


name: E-MTAB-12818:HT29-RepB-Medium (4th Time Point)

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MSc.

text: public

text: ArrayExpress

text: human

text: adult

text: colorectal adenocarcinoma

text: clonetracker lentiviral barcode library

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: colon

text: Homo sapiens

text: HT29-RepB-Medium (4th Time Point)


name: E-MTAB-12818:HT29-RepB-Medium (5th Time Point)

text: MSc.

characteristic: INSDC center name

text: public

text: ArrayExpress

text: human

text: adult

characteristic: developmental stage

text: colorectal adenocarcinoma

characteristic: disease

text: clonetracker lentiviral barcode library

characteristic: genotype

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: colon

text: Homo sapiens

text: HT29-RepB-Medium (5th Time Point)


text: MSc.

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12818:HT29-RepB-Medium(1st Time Point)

text: ArrayExpress

text: human

text: adult

text: colorectal adenocarcinoma

text: clonetracker lentiviral barcode library

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: colon

characteristic: organism part

text: Homo sapiens

text: HT29-RepB-Medium(1st Time Point)


characteristic: ENA-CHECKLIST

text: public

characteristic: SRA accession

tag: Namespace:Institute of Chemical Biology, National Hellenic Research Foundation

characteristic: Submitter Id

text: ArrayExpress

text: RAW 264.7

text: house mouse

text: Protocols: RAW264.7 cells were cultured for 48 h in 6-well plates (Greiner) in phenol red-free alpha MEM supplemented with 10% dextran-coated charcoal-stripped FBS with ultra-low endotoxin levels (Biosera). Cells were treated with vehicle (0.1% DMSO), dexamethasone (1 μM) or AZD9567 (1 μΜ) in the presence or absence of lipopolysaccharide (LPS, 10 ng/ml) for 1 h. At the end of the treatment cells were collected in TRIzol Reagent and used for RNA extraction. RNA was extracted from cells using the TRIzol Reagent (Invitrogen) followed by a clean-up step combined with on-column DNase digestion using the RNeasy kit (Qiagen) according to manufacturers' instructions. After the total RNA extraction and DNase I treatment, magnetic beads with Oligo (dT) are used to isolate mRNA. Then cDNA is synthesized using the mRNA fragments as templates. Short fragments are purified and resolved with EB buffer for end reparation and single nucleotide A (adenine) addition. After that, the short fragments are connected with adapters. The suitable fragments are selected for the PCR amplification as templates.

text: normal

text: wild type genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: ascitic fluid

text: Mus musculus

text: BALB/c

characteristic: strain

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Institute of Chemical Biology, National Hellenic Research Foundation

text: public

text: ArrayExpress

characteristic: broker name

text: RAW 264.7

text: house mouse

characteristic: common name

characteristic: description

text: normal

text: wild type genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: ascitic fluid

text: Mus musculus

text: BALB/c


E-MTAB-12819:Sample 1_GEX

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-12819:Sample 1_GEX

tag: Namespace:The University of Tokyo, Institute for Quantitative Biosciences

text: ArrayExpress

text: mixed K562 and THP-1

text: human

text: Protocols: K562 cells and THP-1 cells were purchased from JCRB CellBank (JCRB0019 lot: 06212017, JCRB0112.1 lot:11092017). Cells were grown in RPMI1640 medium (Sigma-Aldrich) supplemented with 10% FBS (Sigma-Aldrich) and 1x Antibiotic Antimycotic solution (Thermo Fisher Scientific). Cells were encapsulated in microdroplets with DNA-barcoded beads, where DNA barcodes were released from beads and absorbed by cells. cDNA and DNA barcodes were read in separate sequencing libraries. Droplet-based (Chromium NextGEM SIngle Cell 3' Reagent Kits, 10X) Droplet-based (Chromium NextGEM single Cell 3' Reagent Kits, 10X) used for the GEX libraries. For DNA barcode samples, libraries were also prepared in parallel to cDNA samples using the same 10X kit but generated based on a custom cell-hashing method. This cell-hashing method does not tag samples (one barcode)-by-(one sample) basis. Instead, it tags samples with unique ID generated by combinations of barcodes . See Additional File E-MTAB-12819.vsc for a list of each barcode consisting of the combinatorial IDs.

text: mixed chronic myelogenous leukemia and acute monocytic leukemia

text: wild type genotype

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: mixed bone marrow and blood

text: Homo sapiens

text: Sample 1_GEX


E-MTAB-12819:Sample 1_featurebarcoding

text: The University of Tokyo, Institute for Quantitative Biosciences

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-12819:Sample 1_featurebarcoding

text: ArrayExpress

text: mixed K562 and THP-1

text: human

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: mixed bone marrow and blood

text: Homo sapiens

text: Sample 1_featurebarcoding


E-MTAB-12819:Sample 2_GEX

characteristic: ENA-CHECKLIST

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12819:Sample 2_GEX

text: ArrayExpress

text: mixed K562 and THP-1

text: human

text: wild type genotype

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: mixed bone marrow and blood

characteristic: organism part

text: Homo sapiens

text: Sample 2_GEX


E-MTAB-12819:Sample 2_featurebarcoding

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-12819:Sample 2_featurebarcoding

characteristic: Submitter Id

text: ArrayExpress

text: mixed K562 and THP-1

text: human

text: wild type genotype

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: mixed bone marrow and blood

text: Homo sapiens

text: Sample 2_featurebarcoding

characteristic: title


characteristic: ENA-LAST-UPDATE

text: Genomix4Life SRL

text: public

tag: Namespace:Genomix4Life SRL

text: ArrayExpress

characteristic: broker name

text: mononuclear cell

text: human

characteristic: common name

text: Protocols: PBMCs separation was performed using Ficoll-Paque (Ficoll Plaque PLUS – GE Healthcare Life Sciences, Piscataway, USA) RNA was extracted using TRIzol reagent (TRIzol Reagent, Invitrogen Life Technologies, Carlsbad, CA, USA), according to the manufacturer’s instructions Indexed libraries were prepared from 500ng/ea purified RNA with Illumina Stranded mRNA (Illumina) Library Prep Kit according to the manufacturer’s instructions. For library quantifications, TapeStation 4200 (Agilent Technologies) and Qubit (Thermo Fischer) was used.

text: adult

characteristic: developmental stage

text: urinary bladder cancer

characteristic: individual

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens


text: Plasmodium falciparum

characteristic: ArrayExpress-SPECIES

characteristic: External Id

text: SC

characteristic: INSDC center name

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

characteristic: organism

text: Plasmodium falciparum


E-MTAB-12833:Sample 1 GEX

text: UOE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-12833:Sample 1 GEX

characteristic: age

text: ArrayExpress

text: B cell

text: human

text: Protocols: Synovial tissue was collected from RA patients undergoing arthroplasty. The fresh tissue was dissected followed by digestion for 2 hours at 37°C in 1 mg ml−1 Collagenase 1 (Sigma-Aldrich). Debris was removed and cells isolated by sequentially passing through 100, 70 and 40μm cell strainers (Corning). The isolated cells were then were resuspended in resuspension media (RPMI-1640 (Gibco) supplemented with 2 mM l-glutamine, 100 U/ml penicillin, and 100 μg/ml streptomycin, with 40% foetal calf serum (FCS)) then an equal volume of freezing media (resuspension media supplemented with 30% dimethyl sulfoxide (DMSO, Fisher Reagents)) was added to give final density of 10x106/ml in 15% DMSO. The sample was then frozen to -80°C in a Mr Frosty Freezing Container (ThermoFisher Scientific) then stored in liquid nitrogen until further use. Synovial tissue samples were thawed and resuspended according to the 10X protocol as described above. Cells were washed and then stained in FACS buffer at 4°C for 20 minutes with fluorescently conjugated antibodies. Single CD19+ve DAPI-ve CD3-ve CD14-ve B cells were then FACS sorted with the FACS Aria II and FACSDiva 8.0.1 (BD Biosciences). Immediately after sorting the CD19+ve B cells were processed through the Chromium Single Cell Platform using the Chromium Next GEM Single Cell 5' Kit v2 (10X Genomics, PN- 1000265), the Chromium Single Cell Human BCR Amplification Kit (10X Genomics, PN-1000253), and the Chromium Next GEM Chip K Single Cell Kit (10X Genomics, PN-1000287) as per manufacture’s protocol.

characteristic: description

text: rheumatoid arthritis

characteristic: disease

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: synovial tissue

text: Homo sapiens

text: female

characteristic: sex

text: Sample 1 GEX


E-MTAB-12833:Sample 1 V(D)J

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UOE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12833:Sample 1 V(D)J

characteristic: Submitter Id

text: ArrayExpress

text: B cell

text: human

text: rheumatoid arthritis

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: synovial tissue

characteristic: organism part

text: Homo sapiens

text: female

text: Sample 1 V(D)J

characteristic: title


E-MTAB-12833:Sample 2 GEX

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UOE

text: public

text: E-MTAB-12833:Sample 2 GEX

text: ArrayExpress

characteristic: broker name

text: B cell

text: human

characteristic: common name

text: rheumatoid arthritis

characteristic: individual

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: synovial tissue

text: Homo sapiens

text: female

text: Sample 2 GEX


E-MTAB-12833:Sample 2 V(D)J

text: UOE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-12833:Sample 2 V(D)J

characteristic: age

text: ArrayExpress

text: B cell

text: human

text: rheumatoid arthritis

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: synovial tissue

text: Homo sapiens

text: female

text: Sample 2 V(D)J


E-MTAB-12833:Sample 3 GEX

characteristic: ENA-CHECKLIST

text: UOE

text: public

text: E-MTAB-12833:Sample 3 GEX

text: ArrayExpress

text: B cell

text: human

characteristic: description

text: rheumatoid arthritis

characteristic: disease

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: synovial tissue

text: Homo sapiens

text: female

characteristic: sex

text: Sample 3 GEX


E-MTAB-12833:Sample 3 V(D)J

characteristic: ENA-FIRST-PUBLIC

text: UOE

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12833:Sample 3 V(D)J

characteristic: Submitter Id

text: ArrayExpress

text: B cell

text: human

text: rheumatoid arthritis

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: synovial tissue

characteristic: organism part

text: Homo sapiens

text: female

text: Sample 3 V(D)J


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF EDINBURGH

text: public

characteristic: Secondary Id

tag: Namespace:UNIVERSITY OF EDINBURGH

text: NCBI

characteristic: broker name

characteristic: collection date

text: Spot sample of domestic sewage

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: Stirling Community

characteristic: name of the sampling site

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: Untreated municipal

characteristic: sewage type

text: Stirling Community

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF EDINBURGH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: NCBI

text: 24 hour sample of hospital sewage

characteristic: description

text: United Kingdom

text: metagenome

text: Victoria Hospital

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: Untreated municipal

text: Victoria Hospital


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF EDINBURGH

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NCBI

text: 24 hour sample of WWTP influent

text: United Kingdom

text: metagenome

text: Stirling WWTP

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: Untreated municipal

text: Stirling WWTP


text: UNIVERSITY OF EDINBURGH

text: public

characteristic: Secondary Id

text: NCBI

characteristic: broker name

characteristic: collection date

text: 24 hour sample of WWTP influent

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome

text: Kirkcaldy WWTP

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: Untreated municipal

text: Kirkcaldy WWTP


text: UNIVERSITY OF EDINBURGH

text: public

text: NCBI

text: 24 hour sample of WWTP influent

text: United Kingdom

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: Galashiels WWTP

characteristic: name of the sampling site

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: Untreated municipal

characteristic: sewage type

text: Galashiels WWTP

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF EDINBURGH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: NCBI

text: Spot sample of domestic sewage

characteristic: description

text: United Kingdom

text: metagenome

text: Hawick Community

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: Untreated municipal

text: Hawick Community


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF EDINBURGH

text: public

characteristic: INSDC status

characteristic: SRA accession

text: NCBI

text: 24 hour sample of hospital sewage

text: United Kingdom

text: metagenome

text: Borders General Hospital

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: Untreated municipal

text: Borders General Hospital


text: UNIVERSITY OF EDINBURGH

text: public

characteristic: Secondary Id

characteristic: Submitter Id

text: NCBI

characteristic: broker name

characteristic: collection date

text: Spot sample of WWTP influent

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: metagenome

text: Hawick WWTP

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: Untreated municipal

text: Hawick WWTP


text: UNIVERSITY OF EDINBURGH

text: public

text: NCBI

text: 24 hour sample of WWTP influent

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: East Calder WWTP

characteristic: name of the sampling site

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: Untreated municipal

characteristic: sewage type

text: East Calder WWTP


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF EDINBURGH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: NCBI

text: 24 hour sample of WWTP influent

text: United Kingdom

text: metagenome

text: Kinneil Kerse WWTP

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: Untreated municipal

text: Kinneil Kerse WWTP

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF EDINBURGH

text: public

characteristic: INSDC status

characteristic: SRA accession

text: NCBI

text: 24 hour sample of hospital sewage

characteristic: description

text: United Kingdom

text: metagenome

text: St John's Hospital

text: wastewater metagenome

characteristic: sample name

text: wastewater metagenome

text: wastewater metagenome

text: Untreated municipal

text: St John's Hospital


text: UNIVERSITY OF EDINBURGH

text: public

characteristic: Secondary Id

characteristic: Submitter Id

text: NCBI

characteristic: broker name

characteristic: collection date

text: Spot sample of domestic sewage

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: metagenome

text: Grangemouth Community

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: Untreated municipal

text: Grangemouth Community


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF EDINBURGH

text: public

text: NCBI

text: 24 hour sample of WWTP influent

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: Allers WWTP

characteristic: name of the sampling site

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: Untreated municipal

characteristic: sewage type

text: Allers WWTP


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF EDINBURGH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: NCBI

text: 24 hour sample of hospital sewage

text: United Kingdom

text: metagenome

text: Hairmyres Hospital

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: Untreated municipal

text: Hairmyres Hospital

characteristic: title


text: UNIVERSITY OF EDINBURGH

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Secondary Id

characteristic: Submitter Id

text: NCBI

text: Spot sample of domestic sewage

characteristic: description

text: United Kingdom

text: metagenome

text: East Kilbride Community

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: wastewater metagenome

text: Untreated municipal

text: East Kilbride Community


characteristic: ENA-FIRST-PUBLIC

text: UNIVERSITY OF EDINBURGH

text: public

text: NCBI

characteristic: broker name

characteristic: collection date

text: 24 hour sample of WWTP influent

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: metagenome

text: Philipshill WWTP

text: wastewater metagenome

characteristic: organism

characteristic: sample name

text: wastewater metagenome

text: wastewater metagenome

text: Untreated municipal

text: Philipshill WWTP


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: INRAE Bordeaux Nouvelle Aquitaine

text: public

tag: Namespace:INRAE Bordeaux Nouvelle Aquitaine

text: soybean

characteristic: common name

text: soybean leaf biostimulant treated VC stage

text: Glycine max

text: Glycine max


characteristic: External Id

text: INRAE Bordeaux Nouvelle Aquitaine

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: soybean

text: soybean leaf control VC stage

text: Glycine max

text: Glycine max


text: Dalhousie University

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Tree of Life Programme

text: DARIA TASHYREVA

text: INSTITUTE OF PARASITOLOGY, BIOLOGY CENTRE

characteristic: collecting institution

text: Czech Republic

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: BIOLOGY CENTRE

characteristic: geographic location (region and locality)

text: LABORATORY

characteristic: habitat

text: DARIA TASHYREVA

text: not collected

characteristic: lifestage

text: Candidatus Cytomitobacter primus

text: **OTHER SOMATIC ANIMAL TISSUE**

characteristic: organism part

text: ASG

characteristic: project name

text: Both for sequencing

characteristic: relationship

characteristic: sample symbiont of

text: Candidatus Cytomitobacter primus

text: NOT COLLECTED

characteristic: sex

text: Y

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characteristic: ENA-CHECKLIST

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tag: Namespace:Georgia State University

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