text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: NOT PROVIDED

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: aquatic biome

text: WILLIAM LEWIS

text: ciliate culture

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Cambridge | University of Cambridge | Department of Biochemistry | Hopkins Building

text: Anoxic culture flask

characteristic: habitat

text: Cyclidium porcatum

characteristic: host taxid

text: GENOVEVA ESTEBAN | WILLIAM LEWIS

text: metagenome-assembled genome

text: Ciliate: Cyclidium porcatum

text: small freshwater lake biome

characteristic: local environmental context

text: ciliate metagenome

text: Bacillota bacterium

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: NOT PROVIDED

characteristic: proxy voucher

characteristic: sample collection device or method

characteristic: sample derived from

text: Bacillota bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: a4b9c31c-ef31-4d75-b59c-0ff53f957e1a-asg-CL0093


status: PUBLIC

text: Yes

tag: attribute

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

tag: Namespace:Tree of Life Programme

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: NOT PROVIDED

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: DASTOOL (version 1.1.5); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: WILLIAM LEWIS

text: Department of Biochemistry, University of Cambridge, Cambridge, UK

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

characteristic: contamination score

text: ciliate culture

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (region and locality)

text: Anoxic culture flask

text: Cyclidium porcatum

characteristic: host scientific name

text: GENOVEVA ESTEBAN | WILLIAM LEWIS

text: Bournemouth University, Bournemouth, United Kingdom | Department of Biochemistry, University of Cambridge, Cambridge, United Kingdom

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Cyclidium porcatum

text: small freshwater lake biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Trichococcus shcherbakoviae

text: WHOLE ORGANISM

text: United Kingdom | Dorset | Wareham | East Stoke | East Stoke Fen Nature Reserve

text: ASG

text: NOT PROVIDED

text: A pole-mounted beaker was used to collect aquatic sediment from a freshwater pond

text: Trichococcus shcherbakoviae

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

text: GTDB-TK (version 2.1.1); GTDB (release 207_v2)

text: 89b17532-9bee-499f-becb-1a49c542a750-asg-maxbin2.007

text: piCycPorc2.Trichococcus_shcherbakoviae_1


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: NOT PROVIDED

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: aquatic biome

text: WILLIAM LEWIS

text: ciliate culture

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Anoxic culture flask

characteristic: habitat

text: Cyclidium porcatum

characteristic: host taxid

text: GENOVEVA ESTEBAN | WILLIAM LEWIS

text: metagenome-assembled genome

text: Ciliate: Cyclidium porcatum

text: small freshwater lake biome

characteristic: local environmental context

text: ciliate metagenome

text: Candidatus Hydrogenedentes bacterium

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: NOT PROVIDED

characteristic: proxy voucher

characteristic: sample collection device or method

characteristic: sample derived from

text: Candidatus Hydrogenedentes bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: taxonomic classification defined by topology and ANI

text: 9b89ec8d-082b-4b84-8410-e46c42bccd54-asg-maxbin2.066


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: NOT PROVIDED

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: WILLIAM LEWIS

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: ciliate culture

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: Anoxic culture flask

text: Cyclidium porcatum

characteristic: host scientific name

text: GENOVEVA ESTEBAN | WILLIAM LEWIS

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Cyclidium porcatum

text: small freshwater lake biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Thermoguttaceae bacterium

text: WHOLE ORGANISM

text: ASG

text: NOT PROVIDED

text: Thermoguttaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

text: taxonomic novelty determined using RED

text: 59a178bd-4d43-489e-8141-130334ec1781-asg-bin.535


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: NOT PROVIDED

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: aquatic biome

text: WILLIAM LEWIS

text: ciliate culture

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Anoxic culture flask

characteristic: habitat

text: Cyclidium porcatum

characteristic: host taxid

text: GENOVEVA ESTEBAN | WILLIAM LEWIS

text: metagenome-assembled genome

text: Ciliate: Cyclidium porcatum

text: small freshwater lake biome

characteristic: local environmental context

text: ciliate metagenome

text: uncultured Rhodoferax sp.

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: NOT PROVIDED

characteristic: proxy voucher

characteristic: sample collection device or method

characteristic: sample derived from

text: uncultured Rhodoferax sp.

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: cb30231b-8da6-4265-abb7-4f80a7e9a9d0-asg-bin.137


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: NOT PROVIDED

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: WILLIAM LEWIS

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: ciliate culture

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: Anoxic culture flask

text: Cyclidium porcatum

characteristic: host scientific name

text: GENOVEVA ESTEBAN | WILLIAM LEWIS

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Cyclidium porcatum

text: small freshwater lake biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Tolumonas sp.

text: WHOLE ORGANISM

text: ASG

text: NOT PROVIDED

text: uncultured Tolumonas sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

text: 772f163a-6eb8-4fe9-9fa7-ce70fac1aa8a-asg-maxbin2.067


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: NOT PROVIDED

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: aquatic biome

text: WILLIAM LEWIS

text: ciliate culture

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Cambridge | University of Cambridge | Department of Biochemistry | Hopkins Building

text: Anoxic culture flask

characteristic: habitat

text: Cyclidium porcatum

characteristic: host taxid

text: GENOVEVA ESTEBAN | WILLIAM LEWIS

text: metagenome-assembled genome

text: Ciliate: Cyclidium porcatum

text: small freshwater lake biome

characteristic: local environmental context

text: ciliate metagenome

text: Treponemataceae bacterium

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: NOT PROVIDED

characteristic: proxy voucher

characteristic: sample collection device or method

characteristic: sample derived from

text: Treponemataceae bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: a6accef0-0fd1-414a-935d-742eec6b5613-asg-maxbin2.049


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: NOT PROVIDED

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: WILLIAM LEWIS

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: ciliate culture

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: Anoxic culture flask

text: Cyclidium porcatum

characteristic: host scientific name

text: GENOVEVA ESTEBAN | WILLIAM LEWIS

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Cyclidium porcatum

text: small freshwater lake biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Treponemataceae bacterium

text: WHOLE ORGANISM

text: ASG

text: NOT PROVIDED

text: Treponemataceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

text: taxonomic classification fully defined by topology

text: da70dfc3-04e0-4488-9d51-78ee2d32a2c7-asg-bin.257_sub


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: NOT PROVIDED

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: DASTOOL (version 1.1.5); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR

text: aquatic biome

text: WILLIAM LEWIS

text: Department of Biochemistry, University of Cambridge, Cambridge, UK

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

text: ciliate culture

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Anoxic culture flask

characteristic: habitat

text: Cyclidium porcatum

characteristic: host taxid

text: GENOVEVA ESTEBAN | WILLIAM LEWIS

text: metagenome-assembled genome

text: Ciliate: Cyclidium porcatum

text: small freshwater lake biome

characteristic: local environmental context

text: ciliate metagenome

text: Spirochaetota bacterium

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: NOT PROVIDED

characteristic: proxy voucher

characteristic: sample collection device or method

characteristic: sample derived from

text: Spirochaetota bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: 9c02a98b-b84c-44b5-ab69-c94782187e37-asg-maxbin2.029


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: NOT PROVIDED

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: WILLIAM LEWIS

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: ciliate culture

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: Anoxic culture flask

text: Cyclidium porcatum

characteristic: host scientific name

text: GENOVEVA ESTEBAN | WILLIAM LEWIS

text: Bournemouth University, Bournemouth, United Kingdom | Department of Biochemistry, University of Cambridge, Cambridge, United Kingdom

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Cyclidium porcatum

text: small freshwater lake biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Verrucomicrobiae bacterium

text: WHOLE ORGANISM

text: United Kingdom | Dorset | Wareham | East Stoke | East Stoke Fen Nature Reserve

text: ASG

text: NOT PROVIDED

text: A pole-mounted beaker was used to collect aquatic sediment from a freshwater pond

text: Verrucomicrobiae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

text: GTDB-TK (version 2.1.1); GTDB (release 207_v2)

text: 066a7682-a1ac-48de-8761-1470dc9e5c3e-asg-bin.15


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University clinic Duesseldorf

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:University clinic Duesseldorf

characteristic: Submitter Id

text: ZOTZ KLIMAS MVZ Düsseldorf-Centrum GbR ÜBAG für Labormedizin, Genetik, Zytologie, Pathologie

text: not collected

characteristic: collector name

text: Germany

text: Northrhine Westphalia; Duesseldorf metropolitan area

text: human

characteristic: host common name

text: not collected

characteristic: host health state

text: homo sapien

text: not collected

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Norwegian University of Life Sciences

text: public

tag: Namespace:Norwegian University of Life Sciences

characteristic: collection date

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

text: soil metagenome

text: soil metagenome


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Orebro University Hospital

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:Orebro University Hospital

text: not provided

text: Brazil

text: Homo sapiens

characteristic: host

text: Yes

text: male

text: urine

text: Neisseria gonorrhoeae

text: Neisseria gonorrhoeae


characteristic: GISAID Accession ID

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Institute of Medical Virology, Zürich, Switzerland

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: UniversitätsSpital Zürich, Zürich, Switzerland

characteristic: collecting institution

text: Verena Kufner, Maryam Zaheri, Stefan Schmutz, Kevin Steiner, Annette Audigé, Guido Bloemberg, Michael Huber, Alexandra Trkola

characteristic: collector name

text: Switzerland

text: ZH

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6af2f/2023

text: active surveillance not initiated by an outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute of Medical Virology, Zürich, Switzerland

text: public

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6ae5d/2023

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6af19/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

text: public

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: aquatic biome

characteristic: broad-scale environmental context

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

characteristic: collection date

text: RAJCA strain in culture collection of Roxanne Beinart, GSO, URI, RI, USA

unit: m

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: RHODE ISLAND | NARRAGANSETT | UNIVERSITY OF RHODE ISLAND

characteristic: geographic location (region and locality)

text: freshwater pond sediment

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Heterometopus palaeformis

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: small freshwater lake biome

characteristic: local environmental context

text: ciliate metagenome

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: CROATIA | RACJA VAS

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: hand collected into a 50 ml tube

characteristic: sample collection device or method

characteristic: sample derived from

text: ciliate metagenome

text: NOT PROVIDED

text: 5e22263e-f6b6-4a08-a7ca-63b89df04a4e-asg-metagenome

characteristic: tolid


text: No

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: freshwater pond sediment

text: vegetative cell

text: Heterometopus palaeformis

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Methanobacteriaceae archaeon

characteristic: organism

text: WHOLE ORGANISM

text: CROATIA | RACJA VAS

text: ASG

text: hand collected into a 50 ml tube

text: Methanobacteriaceae archaeon

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic classification defined by topology and ANI

text: 4d669a57-52cb-46e3-a012-389a12bce5a9-asg-MAGScoT_cleanbin_000125

text: piHetPala1.Methanobacteriaceae_archaeon_1


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: aquatic biome

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: freshwater pond sediment

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Heterometopus palaeformis

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

characteristic: local environmental context

text: ciliate metagenome

text: Methanobacteriaceae archaeon

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: CROATIA | RACJA VAS

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: hand collected into a 50 ml tube

characteristic: sample collection device or method

characteristic: sample derived from

text: Methanobacteriaceae archaeon

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: GTDB-TK (version 2.1.1); GTDB (release 207_v2)

text: 78997c0c-55e1-435b-9c88-36ed7b9b151f-asg-MAGScoT_cleanbin_000127

text: piHetPala1.Methanobacteriaceae_archaeon_2


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: freshwater pond sediment

text: vegetative cell

text: Heterometopus palaeformis

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Methanospirillum sp.

characteristic: organism

text: WHOLE ORGANISM

text: CROATIA | RACJA VAS

text: ASG

text: hand collected into a 50 ml tube

text: uncultured Methanospirillum sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: ANI

text: 4f46c4f9-f136-4b5a-93c0-665fb400eb41-asg-MAGScoT_cleanbin_000088


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: aquatic biome

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: freshwater pond sediment

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Heterometopus palaeformis

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

characteristic: local environmental context

text: ciliate metagenome

text: Methanothrix sp.

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: CROATIA | RACJA VAS

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: hand collected into a 50 ml tube

characteristic: sample collection device or method

characteristic: sample derived from

text: Methanothrix sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: e79bd500-bc14-49c8-a69f-4cdcf1aca3be-asg-MAGScoT_cleanbin_000074


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: freshwater pond sediment

text: vegetative cell

text: Heterometopus palaeformis

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Methanothrix sp.

characteristic: organism

text: WHOLE ORGANISM

text: CROATIA | RACJA VAS

text: ASG

text: hand collected into a 50 ml tube

text: Methanothrix sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: bb555dea-6c67-40ed-bf20-604f03388a9c-asg-MAGScoT_cleanbin_000098


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: aquatic biome

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: freshwater pond sediment

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Heterometopus palaeformis

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

characteristic: local environmental context

text: ciliate metagenome

text: Bryobacteraceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: CROATIA | RACJA VAS

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: hand collected into a 50 ml tube

characteristic: sample collection device or method

characteristic: sample derived from

text: Bryobacteraceae bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: 100b6473-f729-4dd9-a6e7-ed0c5d028dfb-asg-MAGScoT_cleanbin_000112


text: No

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: freshwater pond sediment

text: vegetative cell

text: Heterometopus palaeformis

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Paludibaculum sp.

characteristic: organism

text: WHOLE ORGANISM

text: CROATIA | RACJA VAS

text: ASG

text: hand collected into a 50 ml tube

text: uncultured Paludibaculum sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: ANI

text: ec8fafd2-6da8-4ea7-839d-b56372027b93-asg-MAGScoT_cleanbin_000129


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: aquatic biome

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

text: RAJCA strain in culture collection of Roxanne Beinart, GSO, URI, RI, USA

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: freshwater pond sediment

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Heterometopus palaeformis

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

characteristic: local environmental context

text: ciliate metagenome

text: uncultured Raoultibacter sp.

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: CROATIA | RACJA VAS

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: hand collected into a 50 ml tube

characteristic: sample collection device or method

characteristic: sample derived from

text: uncultured Raoultibacter sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: ANI

text: 8b7799cf-81c0-4320-8003-8781dfd2af47-asg-MAGScoT_cleanbin_000119


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: RHODE ISLAND | NARRAGANSETT | UNIVERSITY OF RHODE ISLAND

text: freshwater pond sediment

text: vegetative cell

text: Heterometopus palaeformis

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Anaerovoracaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: CROATIA | RACJA VAS

text: ASG

text: hand collected into a 50 ml tube

text: Anaerovoracaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 2a2f2328-af9c-4aa3-ace5-43f21749b296-asg-MAGScoT_cleanbin_000095


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR

text: aquatic biome

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: freshwater pond sediment

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Heterometopus palaeformis

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

characteristic: local environmental context

text: ciliate metagenome

text: Christensenellaceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: CROATIA | RACJA VAS

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: hand collected into a 50 ml tube

characteristic: sample collection device or method

characteristic: sample derived from

text: Christensenellaceae bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic classification fully defined by topology

text: 8d7ec9a8-da84-4433-bcfd-1f46e677417b-asg-MAGScoT_cleanbin_000126


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: freshwater pond sediment

text: vegetative cell

text: Heterometopus palaeformis

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Christensenellaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: CROATIA | RACJA VAS

text: ASG

text: hand collected into a 50 ml tube

text: Christensenellaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 3dd32d10-01a7-4fbc-a69f-65e240a6bb96-asg-MAGScoT_cleanbin_000089


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: aquatic biome

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: freshwater pond sediment

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Heterometopus palaeformis

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

characteristic: local environmental context

text: ciliate metagenome

text: Christensenellaceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: CROATIA | RACJA VAS

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: hand collected into a 50 ml tube

characteristic: sample collection device or method

characteristic: sample derived from

text: Christensenellaceae bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: GTDB-TK (version 2.1.1); GTDB (release 207_v2)

text: taxonomic classification defined by topology and ANI

text: d160f294-a8af-4feb-b0a5-4a4e8b713db0-asg-MAGScoT_cleanbin_000106


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: freshwater pond sediment

text: vegetative cell

text: Heterometopus palaeformis

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Mobilitalea sp.

characteristic: organism

text: WHOLE ORGANISM

text: CROATIA | RACJA VAS

text: ASG

text: hand collected into a 50 ml tube

text: uncultured Mobilitalea sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 07be3a55-5c57-4e78-8347-f0ec14669e92-asg-MAGScoT_cleanbin_000030


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: aquatic biome

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: freshwater pond sediment

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Heterometopus palaeformis

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

characteristic: local environmental context

text: ciliate metagenome

text: uncultured Mobilitalea sp.

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: CROATIA | RACJA VAS

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: hand collected into a 50 ml tube

characteristic: sample collection device or method

characteristic: sample derived from

text: uncultured Mobilitalea sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 26fa63ae-39ed-4c5a-9e7d-c28b8865e415-asg-MAGScoT_cleanbin_000066


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: freshwater pond sediment

text: vegetative cell

text: Heterometopus palaeformis

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Velocimicrobium sp.

characteristic: organism

text: WHOLE ORGANISM

text: CROATIA | RACJA VAS

text: ASG

text: hand collected into a 50 ml tube

text: uncultured Velocimicrobium sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: a6615192-106a-4532-b894-5e08b4695782-asg-MAGScoT_cleanbin_000128


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: aquatic biome

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: freshwater pond sediment

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Heterometopus palaeformis

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

characteristic: local environmental context

text: ciliate metagenome

text: uncultured Sporobacter sp.

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: CROATIA | RACJA VAS

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: hand collected into a 50 ml tube

characteristic: sample collection device or method

characteristic: sample derived from

text: uncultured Sporobacter sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 15918bcd-e98d-4acb-98cc-f066876f0665-asg-MAGScoT_cleanbin_000069


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: RAJCA strain in culture collection of Roxanne Beinart, GSO, URI, RI, USA

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: freshwater pond sediment

text: vegetative cell

text: Heterometopus palaeformis

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Negativicutes bacterium

characteristic: organism

text: WHOLE ORGANISM

text: CROATIA | RACJA VAS

text: ASG

text: hand collected into a 50 ml tube

text: Negativicutes bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 58e143db-e793-45d2-9ef6-b4ae6233671e-asg-MAGScoT_cleanbin_000108


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: aquatic biome

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

text: RHODE ISLAND | NARRAGANSETT | UNIVERSITY OF RHODE ISLAND

characteristic: geographic location (region and locality)

text: freshwater pond sediment

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Heterometopus palaeformis

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

characteristic: local environmental context

text: ciliate metagenome

text: Negativicutes bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: CROATIA | RACJA VAS

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: hand collected into a 50 ml tube

characteristic: sample collection device or method

characteristic: sample derived from

text: Negativicutes bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: d3f14074-233e-41dc-8e74-834b6222f8bf-asg-MAGScoT_cleanbin_000137


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: freshwater pond sediment

text: vegetative cell

text: Heterometopus palaeformis

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Anaerosporomusa sp.

characteristic: organism

text: WHOLE ORGANISM

text: CROATIA | RACJA VAS

text: ASG

text: hand collected into a 50 ml tube

text: uncultured Anaerosporomusa sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 42445cac-9151-4d61-89f9-47f472bd2c04-asg-MAGScoT_cleanbin_000122


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR

text: aquatic biome

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: freshwater pond sediment

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Heterometopus palaeformis

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

characteristic: local environmental context

text: ciliate metagenome

text: uncultured Sporomusa sp.

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: CROATIA | RACJA VAS

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: hand collected into a 50 ml tube

characteristic: sample collection device or method

characteristic: sample derived from

text: uncultured Sporomusa sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: f08bd4ff-2747-4e23-ae10-0356b6010cde-asg-MAGScoT_cleanbin_000052


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: freshwater pond sediment

text: vegetative cell

text: Heterometopus palaeformis

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Bacteroidales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: CROATIA | RACJA VAS

text: ASG

text: hand collected into a 50 ml tube

text: Bacteroidales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: f200f118-f781-48d2-9ec8-e148ddac5664-asg-MAGScoT_cleanbin_000100


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: aquatic biome

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: freshwater pond sediment

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Heterometopus palaeformis

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

characteristic: local environmental context

text: ciliate metagenome

text: Bacteroidales bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: CROATIA | RACJA VAS

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: hand collected into a 50 ml tube

characteristic: sample collection device or method

characteristic: sample derived from

text: Bacteroidales bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: GTDB-TK (version 2.1.1); GTDB (release 207_v2)

text: ANI

text: a4f1c9a7-1c88-4ae3-8748-64f737a45c90-asg-MAGScoT_cleanbin_000096


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: freshwater pond sediment

text: vegetative cell

text: Heterometopus palaeformis

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Bacteroides graminisolvens

characteristic: organism

text: WHOLE ORGANISM

text: CROATIA | RACJA VAS

text: ASG

text: hand collected into a 50 ml tube

text: Bacteroides graminisolvens

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: ab0df43e-9404-4495-aee6-1ebad15e090b-asg-MAGScoT_cleanbin_000068


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: aquatic biome

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: freshwater pond sediment

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Heterometopus palaeformis

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

characteristic: local environmental context

text: ciliate metagenome

text: Macellibacteroides fermentans

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: CROATIA | RACJA VAS

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: hand collected into a 50 ml tube

characteristic: sample collection device or method

characteristic: sample derived from

text: Macellibacteroides fermentans

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: ae8bafb7-06ff-480a-b520-0b797eec1f84-asg-MAGScoT_cleanbin_000110

text: piHetPala1.Macellibacteroides_fermentans_2


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: freshwater pond sediment

text: vegetative cell

text: Heterometopus palaeformis

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Candidatus Hydrogenedentes bacterium

characteristic: organism

text: WHOLE ORGANISM

text: CROATIA | RACJA VAS

text: ASG

text: hand collected into a 50 ml tube

text: Candidatus Hydrogenedentes bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic classification defined by topology and ANI

text: 554c4414-b2e5-4d14-8183-c8ac89b5a273-asg-MAGScoT_cleanbin_000040


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: aquatic biome

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

text: RAJCA strain in culture collection of Roxanne Beinart, GSO, URI, RI, USA

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: freshwater pond sediment

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Heterometopus palaeformis

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

characteristic: local environmental context

text: ciliate metagenome

text: Anaerolineaceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: CROATIA | RACJA VAS

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: hand collected into a 50 ml tube

characteristic: sample collection device or method

characteristic: sample derived from

text: Anaerolineaceae bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: a931a37f-148b-47cb-ad46-cd177bc7cc30-asg-MAGScoT_cleanbin_000047


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: RHODE ISLAND | NARRAGANSETT | UNIVERSITY OF RHODE ISLAND

text: freshwater pond sediment

text: vegetative cell

text: Heterometopus palaeformis

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Anaerolineaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: CROATIA | RACJA VAS

text: ASG

text: hand collected into a 50 ml tube

text: Anaerolineaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: fc14a5f8-bfe4-408b-b291-24e20073adda-asg-MAGScoT_cleanbin_000058


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: aquatic biome

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: freshwater pond sediment

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Heterometopus palaeformis

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

characteristic: local environmental context

text: ciliate metagenome

text: Thermoflexales bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: CROATIA | RACJA VAS

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: hand collected into a 50 ml tube

characteristic: sample collection device or method

characteristic: sample derived from

text: Thermoflexales bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: 4c56fc66-175e-42b9-975b-9ad5ecbaa630-asg-MAGScoT_cleanbin_000123


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: freshwater pond sediment

text: vegetative cell

text: Heterometopus palaeformis

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Phycisphaerae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: CROATIA | RACJA VAS

text: ASG

text: hand collected into a 50 ml tube

text: Phycisphaerae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: 249f9eb3-f31e-4d28-b3a7-9efaf92f80a1-asg-MAGScoT_cleanbin_000093


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: aquatic biome

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: freshwater pond sediment

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Heterometopus palaeformis

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

characteristic: local environmental context

text: ciliate metagenome

text: Thermoguttaceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: CROATIA | RACJA VAS

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: hand collected into a 50 ml tube

characteristic: sample collection device or method

characteristic: sample derived from

text: Thermoguttaceae bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic classification fully defined by topology

text: b8860dd4-fa9a-41e1-b7db-251ef8bb3145-asg-MAGScoT_cleanbin_000092


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: freshwater pond sediment

text: vegetative cell

text: Heterometopus palaeformis

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Thermoguttaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: CROATIA | RACJA VAS

text: ASG

text: hand collected into a 50 ml tube

text: Thermoguttaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: GTDB-TK (version 2.1.1); GTDB (release 207_v2)

text: 090d7340-656e-4038-b13c-801f2c02ccb5-asg-MAGScoT_cleanbin_000091


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: aquatic biome

text: IVAN CEPICKA

text: CHARLES UNIVERSITY

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: freshwater pond sediment

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Heterometopus palaeformis

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Heterometopus palaeformis

text: small freshwater lake biome

characteristic: local environmental context

text: ciliate metagenome

text: Rhizobiaceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: CROATIA | RACJA VAS

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: hand collected into a 50 ml tube

characteristic: sample collection device or method

characteristic: sample derived from

text: Rhizobiaceae bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 79fc436a-9752-4fd9-b07b-f35ebb4efb7d-asg-MAGScoT_cleanbin_000056