text: UNIVERSITY HOHENHEIM

text: public

text: Pig26_Faeces_Day 6-9

text: pig gut metagenome

text: pig gut metagenome

text: Faeces


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY HOHENHEIM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UNIVERSITY HOHENHEIM

characteristic: Submitter Id

text: Pig26_Digesta_Day 10-11

characteristic: description

text: pig gut metagenome

characteristic: organism

text: pig gut metagenome

text: Digesta

characteristic: title


text: UNIVERSITY HOHENHEIM

text: public

text: Pig27_Faeces_Day 6-9

text: pig gut metagenome

text: pig gut metagenome

text: Faeces


text: UNIVERSITY HOHENHEIM

text: public

text: Pig27_Digesta_Day 10-11

text: pig gut metagenome

text: pig gut metagenome

text: Digesta


text: UNIVERSITY HOHENHEIM

text: public

text: Pig28_Faeces_Day 6-9

text: pig gut metagenome

text: pig gut metagenome

text: Faeces


text: UNIVERSITY HOHENHEIM

text: public

text: Pig28_Digesta_Day 10-11

text: pig gut metagenome

text: pig gut metagenome

text: Digesta


text: UNIVERSITY HOHENHEIM

text: public

text: Pig29_Faeces_Day 6-9

text: pig gut metagenome

text: pig gut metagenome

text: Faeces


text: UNIVERSITY HOHENHEIM

text: public

text: Pig29_Digesta_Day 10-11

text: pig gut metagenome

text: pig gut metagenome

text: Digesta


text: UNIVERSITY HOHENHEIM

text: public

text: Pig30_Faeces_Day 6-9

text: pig gut metagenome

text: pig gut metagenome

text: Faeces


text: UNIVERSITY HOHENHEIM

text: public

text: Pig30_Digesta_Day 10-11

text: pig gut metagenome

text: pig gut metagenome

text: Digesta


text: UNIVERSITY HOHENHEIM

text: public

text: Pig31_Faeces_Day 6-9

text: pig gut metagenome

text: pig gut metagenome

text: Faeces


text: UNIVERSITY HOHENHEIM

text: public

text: Pig31_Digesta_Day 10-11

text: pig gut metagenome

text: pig gut metagenome

text: Digesta


text: UNIVERSITY HOHENHEIM

text: public

text: Pig32_Faeces_Day 6-9

text: pig gut metagenome

text: pig gut metagenome

text: Faeces


text: UNIVERSITY HOHENHEIM

text: public

text: Pig32_Digesta_Day 10-11

text: pig gut metagenome

text: pig gut metagenome

text: Digesta


text: Plasmodium falciparum

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: malaria parasite P. falciparum

characteristic: common name

text: Plasmodium falciparum

text: Plasmodium falciparum


text: public

text: non-targetting shRNA

characteristic: RNA interference

tag: Namespace:Advanced Centre for Treatment Research and Education in Cancer (ACTREC)

unit: year

characteristic: age

text: ArrayExpress

characteristic: broker name

text: human

text: Protocols: Each sample was collected by scrapping the cells from a 10cm cell culture dish. Pellet was stored at -20 degrees. AW13516, AW8507 and CAL27 cells were cultured in DMEM medium. The media was supplemented with 10% FBS, 2.5 mg/ml Amphotericin-B (Abbott) and 1.25 μl/ml Gentamycin (Abbott). The cells were cultured at 37 °C in a 5% CO2 incubator. RNA was extracted using the TRIzol solubilization and extraction protocol, as recommended by the manufacturer. Transcriptome sequencing libraries were constructed by using the TruSeq RNA library protocol (Illumina). Briefly, mRNA was purified from 4 μg of intact total RNA using oligodT beads and library preparation was done as per the manufacturer's instructions (TruSeq RNA Sample Preparation Kit, Illumina).

text: adult

characteristic: developmental stage

text: tongue squamous cell carcinoma

characteristic: disease

text: Indian

characteristic: ethnic group

characteristic: genetic modification

text: wild type genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: tongue

characteristic: organism part

text: Homo sapiens

text: male

characteristic: sex


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Advanced Centre for Treatment Research and Education in Cancer (ACTREC)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: MMP10 shRNA

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: human

text: adult

text: tongue squamous cell carcinoma

text: Indian

text: wild type genotype

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: tongue

text: Homo sapiens

text: male


text: public

text: non-targetting shRNA

characteristic: RNA interference

characteristic: age

text: ArrayExpress

characteristic: broker name

text: human

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: tongue squamous cell carcinoma

characteristic: disease

text: European

text: wild type genotype

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: tongue

text: Homo sapiens

text: male

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: MMP10 shRNA

text: ArrayExpress

text: human

text: adult

text: tongue squamous cell carcinoma

text: European

characteristic: ethnic group

characteristic: genetic modification

text: wild type genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: tongue

characteristic: organism part

text: Homo sapiens

text: male

characteristic: sex


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: RNA interference

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: human

text: adult

text: oral squamous cell carcinoma

text: Indian

text: pBABEpuro-empty vector/lipofectamine transfection

text: empty vector

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: tongue

text: Homo sapiens

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: ArrayExpress

characteristic: broker name

text: human

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: oral squamous cell carcinoma

characteristic: disease

text: Indian

text: pBABEpuro-MMP10/lipofectamine transfection

text: stable MMP10 overexpression clone

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: tongue

text: Homo sapiens

text: male

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

tag: Namespace:SUN YAT-SEN UNIVERSITY, SCHOOL OF LIFE SCIENCES

text: 16S rRNA v4v5 Sediemnt samples

text: freshwater sediment metagenome

text: freshwater sediment metagenome


text: SUN YAT-SEN UNIVERSITY, SCHOOL OF LIFE SCIENCES

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: 16S rRNA v4v5 Sediemnt samples

text: freshwater sediment metagenome

text: freshwater sediment metagenome


anyangsed

text: public

characteristic: SRA accession

text: anyangsed

characteristic: Submitter Id

text: 16S rRNA v4v5 Sediemnt samples

text: freshwater sediment metagenome

text: freshwater sediment metagenome


buyangsed

characteristic: ENA-CHECKLIST

text: public

text: buyangsed

text: 16S rRNA v4v5 Sediemnt samples

text: freshwater sediment metagenome

text: freshwater sediment metagenome


ciliwungbaratsed

characteristic: ENA-FIRST-PUBLIC

text: public

text: ciliwungbaratsed

text: 16S rRNA v4v5 Sediemnt samples

text: freshwater sediment metagenome

text: freshwater sediment metagenome


delinghased

text: public

text: delinghased

text: 16S rRNA v4v5 Sediemnt samples

text: freshwater sediment metagenome

text: freshwater sediment metagenome


dongguansed

text: public

text: dongguansed

text: 16S rRNA v4v5 Sediemnt samples

text: freshwater sediment metagenome

text: freshwater sediment metagenome


hefeised

text: public

text: hefeised

text: 16S rRNA v4v5 Sediemnt samples

text: freshwater sediment metagenome

text: freshwater sediment metagenome


huizhoused

text: public

text: huizhoused

text: 16S rRNA v4v5 Sediemnt samples

text: freshwater sediment metagenome

text: freshwater sediment metagenome


linyised

text: public

text: linyised

text: 16S rRNA v4v5 Sediemnt samples

text: freshwater sediment metagenome

text: freshwater sediment metagenome


longyansed

text: public

text: longyansed

text: 16S rRNA v4v5 Sediemnt samples

text: freshwater sediment metagenome

text: freshwater sediment metagenome


qinhuangdaosed

text: public

text: qinhuangdaosed

text: 16S rRNA v4v5 Sediemnt samples

text: freshwater sediment metagenome

text: freshwater sediment metagenome


shangraosed

text: public

text: shangraosed

text: 16S rRNA v4v5 Sediemnt samples

text: freshwater sediment metagenome

text: freshwater sediment metagenome


shenzhensed

text: public

text: shenzhensed

text: 16S rRNA v4v5 Sediemnt samples

text: freshwater sediment metagenome

text: freshwater sediment metagenome


shizuishansed

text: public

text: shizuishansed

text: 16S rRNA v4v5 Sediemnt samples

text: freshwater sediment metagenome

text: freshwater sediment metagenome


weinansed

text: public

text: weinansed

text: 16S rRNA v4v5 Sediemnt samples

text: freshwater sediment metagenome

text: freshwater sediment metagenome


xiansed

text: public

text: xiansed

text: 16S rRNA v4v5 Sediemnt samples

text: freshwater sediment metagenome

text: freshwater sediment metagenome


xiningsed

text: public

text: xiningsed

text: 16S rRNA v4v5 Sediemnt samples

text: freshwater sediment metagenome

text: freshwater sediment metagenome


text: public

text: 16S rRNA v4v5 Sediemnt samples

text: freshwater sediment metagenome

text: freshwater sediment metagenome


zhangzhoused

text: public

text: zhangzhoused

text: 16S rRNA v4v5 Sediemnt samples

text: freshwater sediment metagenome

text: freshwater sediment metagenome


text: Escherichia coli

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli


E-MTAB-12893:Sample 1

text: BRIC, University of Copenhagen

text: public

text: E-MTAB-12893:Sample 1

tag: Namespace:BRIC, University of Copenhagen

characteristic: age

text: ArrayExpress

characteristic: broker name

text: human

characteristic: common name

text: Protocols: SVF cells isolated following the dissection protocol, were stained for 30 min on ice with CD31 and CD45 antibodies according to the dilution in Supp. Table 4 or according to Miltenyi manufacturer protocol, then washed twice with 1%Albumin in DPBS prior to enriching for the SVF Lin– fraction using FACS or MACS (Supp. Table 3). The sorted cells were washed once and resuspended to the concentration of 800 cells/ul in 1%Albumin in DPBS prior to loading them on the 10x Chromium device according to the manufacturer protocol. 2-3 cm3 biopsies from Subcutaneous (SC), Omentum (OM), Perirenal (PR), Mesocolic (MC) and Gallbladder-associated (GB) adipose tissues were washed in PBS to remove excess blood, weighted and finely minced using scissors. Minced adipose tissue was incubated with 0.28 U/ml of liberase TM (Roche #05401119001) in DPBS with calcium and magnesium (Gibco #14040091) for 60 min at 37 °C under agitation. Vigorous shaking was performed after 45 min of incubation to increase the yield of recovered SVF cells. The digested tissue was mixed with an equal volume of 1% human albumin (CSL Behring) in DPBS -/- (Gibco #14190094) to stop the lysis. Following a 5-min centrifugation at 400 g at room temperature, floating lipids and mature adipocytes were discarded by aspiration and the resuspended SVF pellet was sequentially filtered through 100-μm and 40-μm cell strainers to ensure a single cell preparation. To lyse red blood cells, pelleted SVF was resuspended in VersaLyse solution (Beckman Coulter #A09777) according to the manufacturer’s recommendations and washed once with 1% albumin solution. Obtained red blood cell-free SVF suspension was then stained to isolate the lineage (CD45, CD31) negative fraction through FACS or MACS. Immediately after the sample collection protocol, the samples were loaded into the Chromium Single Cell Gene Expression Solution (10x Genomics), following the manufacturer’s recommendations targeting a recovery of 4000 to 5000 cells per run. scRNA-seq libraries were obtained following the 10x Genomics recommended protocol, using the reagents included in the Chromium Single Cell 3′ v2 or v3 Reagent Kit. Immediately after the sample collection protocol, the samples were loaded into the Chromium Single Cell Gene Expression Solution (10x Genomics), following the manufacturer’s recommendations targeting a recovery of 4000 to 5000 cells per run. scRNA-seq libraries were obtained following the 10x Genomics recommended protocol, using the reagents included in the Chromium Single Cell 3′ v2 or v3 Reagent Kit.

text: adult

text: obesity

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: omentum

characteristic: organism part

text: Homo sapiens

text: female

characteristic: sex

text: Sample 1


E-MTAB-12893:Sample 2

characteristic: ENA-LAST-UPDATE

text: BRIC, University of Copenhagen

text: public

text: E-MTAB-12893:Sample 2

text: ArrayExpress

text: human

characteristic: description

text: adult

characteristic: developmental stage

text: obesity

characteristic: disease

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: omentum

text: Homo sapiens

text: female

text: Sample 2

characteristic: title


E-MTAB-12893:Sample 3

characteristic: External Id

text: BRIC, University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12893:Sample 3

text: ArrayExpress

text: human

text: adult

text: obesity

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: omentum

text: Homo sapiens

text: male

text: Sample 3


E-MTAB-12893:Sample 4

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: BRIC, University of Copenhagen

text: public

text: E-MTAB-12893:Sample 4

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: human

text: adult

text: obesity

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: subcutaneous adipose tissue

text: Homo sapiens

text: female

text: Sample 4


E-MTAB-12893:Sample 5

characteristic: ENA-LAST-UPDATE

text: BRIC, University of Copenhagen

text: public

text: E-MTAB-12893:Sample 5

text: ArrayExpress

text: human

characteristic: common name

text: adult

text: obesity

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: subcutaneous adipose tissue

characteristic: organism part

text: Homo sapiens

text: female

characteristic: sex

text: Sample 5


E-MTAB-12893:Sample 6

text: BRIC, University of Copenhagen

text: public

text: E-MTAB-12893:Sample 6

text: ArrayExpress

text: human

characteristic: description

text: adult

characteristic: developmental stage

text: obesity

characteristic: disease

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: subcutaneous adipose tissue

text: Homo sapiens

text: male

text: Sample 6

characteristic: title


E-MTAB-12893:Sample 7

characteristic: External Id

text: BRIC, University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-12893:Sample 7

text: ArrayExpress

text: human

text: adult

text: obesity

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: gallbladder-associated adipose tissue

text: Homo sapiens

text: male

text: Sample 7


E-MTAB-12893:Sample 8

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: BRIC, University of Copenhagen

text: public

characteristic: SRA accession

text: E-MTAB-12893:Sample 8

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: human

text: adult

text: obesity

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: mesocolic adipose tissue

text: Homo sapiens

text: male

text: Sample 8


E-MTAB-12893:Sample 9

characteristic: ENA-LAST-UPDATE

text: BRIC, University of Copenhagen

text: public

text: E-MTAB-12893:Sample 9

text: ArrayExpress

characteristic: broker name

text: human

characteristic: common name

text: adult

text: obesity

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: mesocolic adipose tissue

characteristic: organism part

text: Homo sapiens

text: male

text: Sample 9


E-MTAB-12893:Sample 10

text: BRIC, University of Copenhagen

text: public

text: E-MTAB-12893:Sample 10

text: ArrayExpress

text: human

characteristic: description

text: adult

characteristic: developmental stage

text: obesity

characteristic: disease

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: perirenal fat

text: Homo sapiens

text: female

characteristic: sex

text: Sample 10


E-MTAB-12893:Sample 11

characteristic: External Id

text: BRIC, University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-12893:Sample 11

text: 63 to 75

text: ArrayExpress

text: human

text: adult

text: obesity

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: perirenal fat

text: Homo sapiens

text: mixed male and female

text: Sample 11

characteristic: title


text: Salmonella sp.

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Salmonella sp.

text: Escherichia coli

text: Escherichia coli


characteristic: ENA-LAST-UPDATE

text: UPSC

text: public

text: Populus tremula x Populus tremuloides

characteristic: common name

text: Rotated Phloem sample replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Rotated Phloem sample replicate 2

characteristic: description

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Rotated Phloem sample replicate 3

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Rotated Phloem sample replicate 4

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Rotated Phloem sample replicate 5

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Stationary Phloem sample replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Stationary Phloem sample replicate 2

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Stationary Phloem sample replicate 3

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: Escherichia coli

text: SC

text: public

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Stationary Phloem sample replicate 4

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Stationary Phloem sample replicate 5

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Rotated Xylem sample replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Rotated Xylem sample replicate 2

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Rotated Xylem sample replicate 3

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Rotated Xylem sample replicate 4

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Rotated Xylem sample replicate 5

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Stationary Xylem sample replicate 1

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Stationary Xylem sample replicate 2

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Stationary Xylem sample replicate 3

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Stationary Xylem sample replicate 4

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: UPSC

text: public

text: Populus tremula x Populus tremuloides

text: Stationary Xylem sample replicate 5

text: Populus tremula x Populus tremuloides

text: Populus tremula x Populus tremuloides


text: CENTER FOR GENOMIC REGULATION (CRG)

text: public

tag: Namespace:CENTER FOR GENOMIC REGULATION (CRG)

text: Chikungunya virus

text: Chikungunya virus


text: Plasmodium falciparum

text: SC

text: public

text: malaria parasite P. falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum


text: public

tag: Namespace:ADDIS ABABA SCIENCE AND TECHNOLOGY UNIVERSITY

text: CP_DDME210007523 soil sample from CP station

text: Grassland

characteristic: environment (biome)

text: Wastes

characteristic: environment (feature)

text: Soil

characteristic: environment (material)

text: Ethiopia

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: metagenome

characteristic: project name

text: metagenome

text: Illumina HiSeq 1500

characteristic: sequencing method

text: soil

characteristic: soil environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: ADDIS ABABA SCIENCE AND TECHNOLOGY UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: EP_DDME210007522 soil sample from EP station

text: Grassland

text: Wastes

text: Soil

text: Ethiopia

text: metagenome

text: metagenome

characteristic: organism

text: metagenome

text: Illumina HiSeq 1500

text: soil

characteristic: title


characteristic: ENA-LAST-UPDATE

text: public

characteristic: Submitter Id

text: TB_DDME210007521 soil sample from TB station

characteristic: description

text: Grassland

characteristic: environment (biome)

text: Wastes

characteristic: environment (feature)

text: Soil

characteristic: environment (material)

text: Ethiopia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

text: metagenome

text: metagenome

text: metagenome

text: Illumina HiSeq 1500

text: soil


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: Natural History Museum

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: NATURAL HISTORY MUSEUM

characteristic: barcoding center

text: COPO

characteristic: broker name

text: RYAN MITCHELL

text: NATIONAL MUSEUMS NORTHERN IRELAND

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: England|Township: Sheringham

characteristic: geographic location (region and locality)

text: NOT COLLECTED

characteristic: habitat

text: RYAN MITCHELL

text: NATIONAL MUSEUMS NORTHERN IRELAND

text: adult

characteristic: lifestage

text: Poecilolycia vittata

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

text: Hand Picked

characteristic: sample collection device or method

text: Poecilolycia vittata

text: NOT PROVIDED

characteristic: sex

text: 84a9afce-a7fe-47cb-afde-668f21b42ca4-DTOL-specimen

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Animal and Plant Health Agency

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Animal and Plant Health Agency

characteristic: Submitter Id

text: Isolated from pig ceaca at abbatoir

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

characteristic: host health state

text: porcine

characteristic: host scientific name

characteristic: isolate

text: Caecal Content

text: Escherichia fergusonii

characteristic: organism

text: Escherichia fergusonii

characteristic: strain checklist_accession

text: Prevalence of antimicrobial resistance genes in Escherichia coli isolated from pigs in England.

characteristic: title


text: Liver

characteristic: ArrayExpress-PHENOTYPE

text: male

characteristic: ArrayExpress-SEX

text: Canis familiaris

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Male

characteristic: GENDER

text: SC

text: public

text: Liver

characteristic: PHENOTYPE

text: dog

characteristic: common name

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Spleen

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text: Canis familiaris

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Male

text: SC

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

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text: Spleen

characteristic: SRA accession

characteristic: Submitter Id

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Liver

text: female

text: Canis familiaris

text: Female

text: SC

text: public

text: Liver

text: dog

text: Canis lupus familiaris

characteristic: organism

text: Canis lupus familiaris

characteristic: title


text: Heart

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text: male

characteristic: ArrayExpress-SEX

text: Canis familiaris

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text: SC

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text: Heart

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text: Canis lupus familiaris

text: Canis lupus familiaris


text: Bladder muscle

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characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

text: Male

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text: Bladder muscle

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text: Canis lupus familiaris

text: Canis lupus familiaris


text: Pancreas

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characteristic: External Id

text: Male

characteristic: GENDER

text: SC

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text: Pancreas

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text: Canis lupus familiaris

text: Canis lupus familiaris


text: Small intestine

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text: SC

text: public

text: Small intestine

characteristic: PHENOTYPE

text: dog

characteristic: common name

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Adrenal gland

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characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Female

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text: Canis lupus familiaris


text: Kidney

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text: SC

characteristic: INSDC center name

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text: public

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text: Canis lupus familiaris


text: Lymph node

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text: SC

characteristic: INSDC last update

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characteristic: SRA accession

characteristic: Submitter Id

text: dog

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text: Lymph node

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text: Lymph node

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characteristic: organism

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text: Gall bladder

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text: Female

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characteristic: External Id

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text: ena-SAMPLE-TAB-27-04-2023-16:56:02:314-41722

tag: Namespace:Institut for Microbiology University Greifswald

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