text: public

text: human

text: EXP19006439_Control-Non-Transf_E08_Ctrl_C12s329_5

text: Denmark

text: Homo sapiens

text: Homo sapiens


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Danmarks Tekniske Universitet (DTU) NNF Center for Biosustainability

characteristic: Submitter Id

characteristic: collection date

text: human

characteristic: common name

text: EXP19006439_Control-Non-Transf_E09_Ctrl_C17s297_5

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: title


text: Danmarks Tekniske Universitet (DTU) NNF Center for Biosustainability

text: public

text: human

text: EXP19006439_Control-Non-Transf_E11_Ctrl_AAVS1_5

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_E12_Ctrl_TRAC_41_20nt

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_F01_Ctrl_C4s231_6

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_F02_Ctrl_C7s257_6

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_F03_Ctrl_C4s283_6

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

tag: Namespace:Originating lab: Wales Specialist Virology Centre Sequencing lab: Pathogen Genomics Unit

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: Wales

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: human

characteristic: common name

text: EXP19006439_Control-Non-Transf_F04_Ctrl_C7s301_6

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_F05_Ctrl_C6s311_6_Ampl1

text: Denmark

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: title


text: public

text: human

text: EXP19006439_Control-Non-Transf_F06_Ctrl_CXs313_6

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_F07_Ctrl_C8s325_6

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_F08_Ctrl_C12s329_6

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_F09_Ctrl_C5s255_1

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_F11_Ctrl_ROSA26_1

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_F12_Ctrl_TRAC_42_20nt

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_G01_Ctrl_C4s231_7

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: Danmarks Tekniske Universitet (DTU) NNF Center for Biosustainability

text: public

text: human

text: EXP19006439_Control-Non-Transf_G02_Ctrl_C7s257_7

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_G03_Ctrl_C4s283_7

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_G04_Ctrl_C7s301_7

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_G05_Ctrl_C6s311_7

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_G06_Ctrl_CXs313_7

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_G07_Ctrl_C8s325_7

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_G08_Ctrl_C12s329_7

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_G09_Ctrl_C5s255_2

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_G10_Ctrl_CD19ex2

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_G11_Ctrl_ROSA26_2

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_G12_Ctrl_TRAC_43_20nt

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_H01_Ctrl_C4s231_8

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_H02_Ctrl_C7s257_8

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_H03_Ctrl_C4s283_8

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_H04_Ctrl_C7s301_8

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_H05_Ctrl_C6s311_8

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: Danmarks Tekniske Universitet (DTU) NNF Center for Biosustainability

text: public

text: human

text: EXP19006439_Control-Non-Transf_H06_Ctrl_CXs313_8

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_H07_Ctrl_C8s325_8

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_H09_Ctrl_C5s255_3

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_H11_Ctrl_ROSA26_3

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: EXP19006439_Control-Non-Transf_H12_Ctrl_C6s311_6_Ampl2

text: Denmark

text: Homo sapiens

text: Homo sapiens


text: Originating lab: Wales Specialist Virology Centre Sequencing lab: Pathogen Genomics Unit

text: public

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: Wales

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: collection date

text: not provided

text: not provided

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Scotland

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

text: not provided

text: not provided


text: West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

text: public

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: Scotland

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: organism

text: not provided

characteristic: title

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Jikei University School of Medicine

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Jikei University School of Medicine

text: ArrayExpress

text: Jurkat

text: not collected

text: human

characteristic: common name

text: Protocols: Jurkat and MT-2 cells were provided by the Japan National Institute of Biomedical Innovation, Health and Nutrition, Japanese Collection of Research Bioresources Cell Bank (Osaka, Japan). The cell lines were cultured in Roswell Park Memorial Institute medium (Life Technologies) supplemented with 10% fetal bovine serum (Gibco). Mycoplasma testing (MycoAlert Quick Mycoplasma Detection Kit, Lonza) was routinely conducted. Mycoplasma contamination was not detected during the study period. RNA was extracted from the 1 x106 cells by QIAzol Lysis Reagent (QIAGEN). Concentrations of nucleic acids were measured by nanodrop (all experiments) and/or Qubit HS RNA-kit (only for RNA-seq). RNA quantity and quality were measured by Agilent 2100 Bioanalyzer (Agilent technologies). RNA integration values (RIN) >8 were considered to proceed to the further analysis. RNA-seq libraries were generated using Illumina TruSeq Stranded Total RNA kits. The resultant cDNA libraries were quantified via Qubit and assessed for quality via Bioanalyzer.

characteristic: description

text: childhood T acute lymphoblastic leukemia

characteristic: disease

text: NFKB1 knockout

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens


text: Jikei University School of Medicine

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: Jurkat

text: not collected

characteristic: collection date

text: human

text: NFKB2 knockout

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Jikei University School of Medicine

text: public

text: ArrayExpress

text: Jurkat

text: not collected

text: human

text: wild type genotype

text: not collected

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

characteristic: title


characteristic: External Id

text: Jikei University School of Medicine

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: not collected

text: human

text: NFKB1 knockout

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: umbilical cord blood

text: Homo sapiens


text: Jikei University School of Medicine

text: public

text: ArrayExpress

text: not collected

text: human

characteristic: common name

characteristic: description

characteristic: disease

text: NFKB2 knockout

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: umbilical cord blood

text: Homo sapiens


text: Jikei University School of Medicine

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: human

text: wild type genotype

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: umbilical cord blood

characteristic: organism part

text: Homo sapiens


E-MTAB-13409:Sample 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: wild type (tdTomato-)

characteristic: FACS

text: European Bioinformatics Centre EMBL-EBI

text: public

text: E-MTAB-13409:Sample 1

tag: Namespace:European Bioinformatics Centre EMBL-EBI

text: ArrayExpress

text: not collected

text: house mouse

text: Protocols: TdTomato-expressing mouse embryonic stem cells (ESC) were derived as previously described (Pijuan-Sala et al., 2019). Briefly, ESC lines were derived from E3.5 blastocysts obtained by crossing a male ROSA26tdTomato (Jax Labs – 007905) with a wildtype C57BL/6 female, expanded under the 2i+LIF conditions (Ying et al., 2008) and transiently transfected with a Cre-IRES-GFP plasmid (Wray et al., 2011) using Lipofectamine 3000 Transfection Reagent (ThermoFisher Scientific, #L3000008) according to manufacturer’s instructions. A tdTomato-positive, male, karyotypically normal line, competent for chimaeras generation as assessed using morula aggregation assay, was selected for targeting Mixl1. Two guides were designed using the http://crispr.mit.edu tool and were cloned into the pX458 plasmid (Addgene, #48138) as previously described (Ran et al., 2013). The obtained plasmids were then used to transfect the cells and single transfected clones were expanded and assessed for Cas9-induced mutations. Genomic DNA was isolated by incubating cell pellets in 0.1 mg/ml of Proteinase K (Sigma, #03115828001) in TE buffer at 50°C for 2 hours, followed by 5 min at 99°C. The sequence flanking the guide-targeted sites was amplified from the genomic DNA by polymerase chain reaction (PCR) in a Biometra T3000 Thermocycler (30 sec at 98°C ; 30 cycles of 10 sec at 98°C, 20 sec at 58°C, 20 sec at 72°C; and elongation for 7 min at 72°C) using the Phusion High-Fidelity DNA Polymerase (NEB, #M0530S) according to the manufacturer’s instructions. Primers including Nextera overhangs were used, allowing library preparation with the Nextera XT Kit (Illumina, #15052163), and sequencing was performed using the Illumina MiSeq system according to manufacturer’s instructions. ESC clones showing frameshift mutations in the Mixl1 coding region resulting in the functional inactivation of Mixl1 were selected for injection into C57BL/6 E3.5 blastocysts. Chimeric embryos were harvested at E8.5, dissected, and single-cell suspensions were generated from three independent pools of embryos by TrypLE Express dissociation reagent (Thermo Fisher Scientific) incubation for 7-10 minutes at 37°C under agitation. Single-cell suspensions were sorted into tdTomato+ and tdTomato- samples using a BD Influx sorter with DAPI at 1µg/ml (Sigma) as a viability stain for subsequent 10X scRNA-seq library preparation (version 3 chemistry) Performed according to manufacturer instructions (10X single-cell 3’ v3 chemistry) Performed according to manufacturer instructions (10X single-cell 3’ v3 chemistry)

characteristic: developmental stage

text: Mixl1-/- and Mixl1+/+ chimera

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

characteristic: strain

text: Sample 1


E-MTAB-13409:Sample 2

characteristic: External Id

text: Mixl1-/- (tdTomato+)

text: European Bioinformatics Centre EMBL-EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-13409:Sample 2

text: ArrayExpress

text: not collected

text: house mouse

characteristic: common name

characteristic: description

text: Mixl1-/- and Mixl1+/+ chimera

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 2

characteristic: title


E-MTAB-13409:Sample 3

text: wild type (tdTomato-)

text: European Bioinformatics Centre EMBL-EBI

text: public

characteristic: SRA accession

text: E-MTAB-13409:Sample 3

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: house mouse

text: Mixl1-/- and Mixl1+/+ chimera

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 3


E-MTAB-13409:Sample 4

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Mixl1-/- (tdTomato+)

characteristic: FACS

text: European Bioinformatics Centre EMBL-EBI

text: public

text: E-MTAB-13409:Sample 4

text: ArrayExpress

text: not collected

text: house mouse

characteristic: developmental stage

text: Mixl1-/- and Mixl1+/+ chimera

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 4


E-MTAB-13409:Sample 5

characteristic: External Id

text: wild type (tdTomato-)

text: European Bioinformatics Centre EMBL-EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-13409:Sample 5

text: ArrayExpress

text: not collected

text: house mouse

text: Mixl1-/- and Mixl1+/+ chimera

text: not collected

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Mus musculus

characteristic: strain

text: Sample 5


E-MTAB-13409:Sample 6

text: Mixl1-/- (tdTomato+)

text: European Bioinformatics Centre EMBL-EBI

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13409:Sample 6

characteristic: Submitter Id

text: ArrayExpress

text: not collected

text: house mouse

characteristic: common name

characteristic: description

text: Mixl1-/- and Mixl1+/+ chimera

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: Mus musculus

text: Sample 6

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EMBL

text: public

characteristic: collection date

text: human-associated habitat [ENVO:00009003]

characteristic: environment (biome)

text: intestine environment [ENVO:2100002]

characteristic: environment (feature)

text: feces [ENVO:00002003]

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human-associated environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: MyMicrobes

characteristic: project name

text: human gut metagenome

text: illumina

characteristic: sequencing method


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMBL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: intestine environment [ENVO:2100002]

text: feces [ENVO:00002003]

text: South Africa

characteristic: geographic location (country and/or sea)

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: MyMicrobes

text: human gut metagenome

text: illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EMBL

text: public

characteristic: Submitter Id

characteristic: collection date

characteristic: environment (biome)

text: mouth environment [ENVO:08000002]

characteristic: environment (feature)

text: saliva [ENVO:02000036]

text: Germany

text: human-gut

text: metagenome

text: human gut metagenome

text: MyMicrobes

text: human gut metagenome

text: illumina

characteristic: title


text: EMBL

text: public

text: intestine environment [ENVO:2100002]

text: feces [ENVO:00002003]

characteristic: environment (material)

text: Luxembourg

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human-associated environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: MyMicrobes

characteristic: project name

text: human gut metagenome

text: illumina

characteristic: sequencing method


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMBL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: intestine environment [ENVO:2100002]

text: feces [ENVO:00002003]

text: France

text: human-gut

text: metagenome

text: human gut metagenome

text: MyMicrobes

text: human gut metagenome

text: illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EMBL

text: public

characteristic: Submitter Id

characteristic: collection date

characteristic: environment (biome)

text: intestine environment [ENVO:2100002]

text: feces [ENVO:00002003]

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: human-gut

text: metagenome

text: human gut metagenome

characteristic: organism

text: MyMicrobes

text: human gut metagenome

text: illumina


text: EMBL

text: public

text: intestine environment [ENVO:2100002]

characteristic: environment (feature)

text: feces [ENVO:00002003]

characteristic: environment (material)

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human-associated environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: MyMicrobes

text: human gut metagenome

text: illumina

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMBL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: intestine environment [ENVO:2100002]

text: feces [ENVO:00002003]

text: Singapore

text: human-gut

text: metagenome

text: human gut metagenome

text: MyMicrobes

characteristic: project name

text: human gut metagenome

text: illumina

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EMBL

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: environment (biome)

text: intestine environment [ENVO:2100002]

text: feces [ENVO:00002003]

text: Israel

text: human-gut

text: metagenome

text: human gut metagenome

text: MyMicrobes

text: human gut metagenome

text: illumina


text: EMBL

text: public

text: intestine environment [ENVO:2100002]

characteristic: environment (feature)

text: feces [ENVO:00002003]

characteristic: environment (material)

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human-associated environmental package

text: metagenome

text: human gut metagenome

characteristic: organism

text: MyMicrobes

text: human gut metagenome

text: illumina


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMBL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: intestine environment [ENVO:2100002]

text: feces [ENVO:00002003]

text: Denmark

text: human-gut

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: MyMicrobes

text: human gut metagenome

text: illumina

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EMBL

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: intestine environment [ENVO:2100002]

text: feces [ENVO:00002003]

text: Netherlands

text: human-gut

text: metagenome

text: human gut metagenome

text: MyMicrobes

characteristic: project name

text: human gut metagenome

text: illumina

characteristic: sequencing method


text: EMBL

text: public

characteristic: collection date

characteristic: environment (biome)

text: intestine environment [ENVO:2100002]

characteristic: environment (feature)

text: feces [ENVO:00002003]

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

text: metagenome

text: human gut metagenome

text: MyMicrobes

text: human gut metagenome

text: illumina


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMBL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: intestine environment [ENVO:2100002]

text: feces [ENVO:00002003]

text: Austria

text: human-gut

characteristic: human-associated environmental package

text: metagenome

text: human gut metagenome

characteristic: organism

text: MyMicrobes

text: human gut metagenome

text: illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: EMBL

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: intestine environment [ENVO:2100002]

text: feces [ENVO:00002003]

text: Greece

text: human-gut

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: MyMicrobes

text: human gut metagenome

text: illumina

characteristic: title


text: University of Barcelona

text: public

tag: Namespace:University of Barcelona

text: anaerobic sludge

characteristic: broad-scale environmental context

characteristic: collection date

text: 25A lab scale fermenter

characteristic: description

text: Sludge

characteristic: environmental medium

text: Spain

characteristic: geographic location (country and/or sea)

text: anaerobic lab scale bioreactor

characteristic: local environmental context

text: activated sludge metagenome

characteristic: project name

text: activated sludge metagenome


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Barcelona

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: anaerobic sludge

text: 35A lab scale fermenter

text: Sludge

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: anaerobic lab scale bioreactor

text: activated sludge metagenome

text: activated sludge metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: University of Barcelona

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: anaerobic sludge

text: 45A lab scale fermenter

text: Sludge

text: Spain

text: anaerobic lab scale bioreactor

text: activated sludge metagenome

characteristic: organism

text: activated sludge metagenome


text: University of Barcelona

text: public

text: anaerobic sludge

characteristic: broad-scale environmental context

characteristic: collection date

text: 35B lab scale fermenter

characteristic: description

text: Sludge

characteristic: environmental medium

text: Spain

text: anaerobic lab scale bioreactor

text: activated sludge metagenome

text: activated sludge metagenome

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Barcelona

text: public

text: anaerobic sludge

text: 55B lab scale fermenter

text: Sludge

text: Spain

characteristic: geographic location (country and/or sea)

text: anaerobic lab scale bioreactor

characteristic: local environmental context

text: activated sludge metagenome

characteristic: project name

text: activated sludge metagenome


text: University of Barcelona

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: anaerobic sludge

text: WAS_A lab scale fermenter

text: Sludge

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: anaerobic lab scale bioreactor

text: activated sludge metagenome

text: activated sludge metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: University of Barcelona

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: anaerobic sludge

text: WAS_B lab scale fermenter

text: Sludge

text: Spain

text: anaerobic lab scale bioreactor

text: activated sludge metagenome

text: activated sludge metagenome


text: University of Warmia and Mazury

text: public

tag: Namespace:University of Warmia and Mazury

characteristic: collection date

text: house mouse

characteristic: common name

text: Sample 1 of control murine liver

characteristic: description

text: Poland

text: Mus musculus

characteristic: organism

text: Mus musculus


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Warmia and Mazury

text: public

text: house mouse

text: Sample 2 of control murine liver

text: Poland

characteristic: geographic location (country and/or sea)

text: Mus musculus

text: Mus musculus

characteristic: title


text: University of Warmia and Mazury

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: house mouse

text: Sample 3 of control murine liver

text: Poland

text: Mus musculus

text: Mus musculus


text: University of Warmia and Mazury

characteristic: INSDC last update

text: public

text: house mouse

text: Sample 4 of control murine liver

text: Poland

text: Mus musculus

text: Mus musculus


text: University of Warmia and Mazury

text: public

text: house mouse

text: Sample 5 of control murine liver

text: Poland

text: Mus musculus

text: Mus musculus


text: University of Warmia and Mazury

text: public

text: house mouse

text: Sample 1 of BPA-treated murine liver

text: Poland

text: Mus musculus

text: Mus musculus


text: University of Warmia and Mazury

text: public

text: house mouse

text: Sample 2 of BPA-treated murine liver

text: Poland

text: Mus musculus

text: Mus musculus


text: University of Warmia and Mazury

text: public

text: house mouse

text: Sample 3 of BPA-treated murine liver

text: Poland

text: Mus musculus

text: Mus musculus


text: University of Warmia and Mazury

text: public

text: house mouse

text: Sample 4 of BPA-treated murine liver

text: Poland

text: Mus musculus

text: Mus musculus


text: University of Warmia and Mazury

text: public

text: house mouse

text: Sample 5 of BPA-treated murine liver

text: Poland

text: Mus musculus

text: Mus musculus


text: Stanford University

text: public

tag: Namespace:Stanford University

text: Norway rat

text: USA

text: Rattus norvegicus

text: Rattus norvegicus


text: Statens Serum Institut

text: public

tag: Namespace:Statens Serum Institut

text: building

characteristic: broad-scale environmental context

unit: m

characteristic: depth

text: wastewater

characteristic: environmental medium

text: Denmark

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: wastewater treatment plant

characteristic: local environmental context

text: SARS-CoV-2 wastewater Illumina sequencing, Denmark

characteristic: project name

text: Illumina

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Statens Serum Institut

text: public

characteristic: INSDC status

characteristic: SRA accession

text: DELAYED-SAMPLE_Damhusåen_Renseanlæg_2023-09-19

characteristic: Submitter Id

text: building

characteristic: collection date

text: wastewater

text: Denmark

text: wastewater treatment plant

text: Illumina


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: yes

characteristic: INSDC center name

text: public

text: clinical

characteristic: Source

tag: Namespace:NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE

characteristic: description

text: Portugal

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host scientific name

text: Listeria monocytogenes

characteristic: organism

text: Listeria monocytogenes

characteristic: title


text: yes

text: NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: clinical

text: Portugal

text: Homo sapiens

text: Listeria monocytogenes

text: Listeria monocytogenes


characteristic: ENA-CHECKLIST

text: Institute of tropical Medicine Antwerp

text: public

tag: Namespace:Institute of tropical Medicine Antwerp

text: not provided

text: MTB isolate

text: Gambia

text: diseased

characteristic: host health state

text: homo sapien

characteristic: isolate

text: sputum

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Pretomanid study


characteristic: ENA-FIRST-PUBLIC

text: Institute of tropical Medicine Antwerp

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: MTB isolate

text: Belgium

text: diseased

text: homo sapien

text: sputum

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Pretomanid study


characteristic: ENA-LAST-UPDATE

text: Institute of tropical Medicine Antwerp

text: public

characteristic: Submitter Id

text: not provided

characteristic: collection date

text: MTB isolate

text: USA

text: diseased

text: homo sapien

text: sputum

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Pretomanid study


characteristic: External Id

text: Institute of tropical Medicine Antwerp

characteristic: INSDC center name

text: public

text: not provided

text: MTB isolate

text: Central African Republic

text: diseased

text: homo sapien

text: sputum

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Pretomanid study


text: Institute of tropical Medicine Antwerp

text: public

text: not provided

text: MTB isolate

characteristic: description

text: France

characteristic: geographic location (country and/or sea)

text: diseased

text: homo sapien

text: sputum

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Pretomanid study


text: Institute of tropical Medicine Antwerp

text: public

text: not provided

text: MTB isolate

text: Burkina Faso

text: diseased

text: homo sapien

characteristic: host scientific name

text: sputum

text: Mycobacterium tuberculosis

characteristic: organism

text: Mycobacterium tuberculosis

text: Pretomanid study


text: Institute of tropical Medicine Antwerp

characteristic: INSDC first public

text: public

text: not provided

text: MTB isolate

text: Bangladesh

text: diseased

text: homo sapien

text: sputum

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Pretomanid study

characteristic: title


characteristic: ENA-CHECKLIST

text: Institute of tropical Medicine Antwerp

characteristic: INSDC last update

text: public

text: not provided

text: MTB isolate

text: Russia

text: diseased

text: homo sapien

text: sputum

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Pretomanid study


text: Institute of tropical Medicine Antwerp

text: public

text: not provided

text: MTB isolate

text: Malawi

text: diseased

characteristic: host health state

text: homo sapien

characteristic: isolate

text: sputum

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Pretomanid study


characteristic: ENA-FIRST-PUBLIC

text: Institute of tropical Medicine Antwerp

text: public

characteristic: INSDC status

text: not provided

text: MTB isolate

text: Guinea

text: diseased

text: homo sapien

text: sputum

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Pretomanid study


characteristic: ENA-LAST-UPDATE

text: Institute of tropical Medicine Antwerp

text: public

characteristic: SRA accession

text: not provided

text: MTB isolate

text: Zambia

text: diseased

text: homo sapien

text: sputum

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Pretomanid study


text: Institute of tropical Medicine Antwerp

text: public

characteristic: Submitter Id

text: not provided

characteristic: collection date

text: MTB isolate

text: Sweden

text: diseased

text: homo sapien

text: sputum

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Pretomanid study


characteristic: External Id

text: Institute of tropical Medicine Antwerp

characteristic: INSDC center name

text: public

text: not provided

text: MTB isolate

text: Niger

text: diseased

text: homo sapien

text: sputum

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Pretomanid study


text: Institute of tropical Medicine Antwerp

text: public

text: not provided

text: MTB isolate

characteristic: description

text: Kenya

characteristic: geographic location (country and/or sea)

text: diseased

text: homo sapien

text: sputum

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Pretomanid study


text: Institute of tropical Medicine Antwerp

text: public

text: not provided

text: MTB isolate

text: Rwanda

text: diseased

text: homo sapien

characteristic: host scientific name

text: sputum

text: Mycobacterium tuberculosis

characteristic: organism

text: Mycobacterium tuberculosis

text: Pretomanid study


text: Institute of tropical Medicine Antwerp

characteristic: INSDC first public

text: public

text: not provided

text: MTB isolate

text: Tanzania

text: diseased

text: homo sapien

text: sputum

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Pretomanid study

characteristic: title


characteristic: ENA-CHECKLIST

text: Institute of tropical Medicine Antwerp

characteristic: INSDC last update

text: public

text: not provided

text: MTB isolate

text: Germany

text: diseased

text: homo sapien

text: sputum

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: Pretomanid study


text: public

tag: Namespace:Respiratory Virus Unit, Microbiology Services Colindale, Public Health England

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: receipt date

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Respiratory Virus Unit, Microbiology Services Colindale, Public Health England

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: collection date

text: not provided

text: not provided

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

text: not provided

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: organism

text: not provided

characteristic: title

text: not provided


characteristic: ENA-CHECKLIST

text: TUM

characteristic: INSDC last update

text: public

text: human

characteristic: common name

text: Vaginal

characteristic: delivery

text: Stool sample from infant 01-091 born with Vaginal delivery, at month 36 of age, been fed Synbiotic Formula

characteristic: description

text: human gut

characteristic: environment (biome)

text: lower intestine

characteristic: environment (feature)

text: feacal matter

characteristic: environment (material)

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

unit: months

characteristic: host age

text: stool

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: Homo sapiens

text: INFANT MICROBIOME OVERTIME

characteristic: project name

text: Homo sapiens

text: Illumina

characteristic: sequencing method

text: Synbiotic Formula

characteristic: special diet


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TUM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: human

text: Vaginal

text: Stool sample from infant 01-098 born with Vaginal delivery, at month 36 of age, been fed Synbiotic Formula

text: human gut

text: lower intestine

text: feacal matter

text: France

characteristic: geographic location (country and/or sea)

text: stool

text: human-gut

text: metagenome

text: Homo sapiens

characteristic: organism

text: INFANT MICROBIOME OVERTIME

text: Homo sapiens

text: Illumina

text: Synbiotic Formula

characteristic: title


text: TUM

text: public

text: human

characteristic: common name

text: Vaginal

characteristic: delivery

text: Stool sample from infant 34-008 born with Vaginal delivery, at month 36 of age, been fed Synbiotic Formula

characteristic: description

text: human gut

characteristic: environment (biome)

text: lower intestine

characteristic: environment (feature)

text: feacal matter

characteristic: environment (material)

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: stool

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: Homo sapiens

text: INFANT MICROBIOME OVERTIME

characteristic: project name

text: Homo sapiens

text: Illumina

text: Synbiotic Formula


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TUM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: human

text: Vaginal

text: Stool sample from infant 34-009 born with Vaginal delivery, at month 36 of age, been fed Synbiotic Formula

text: human gut

text: lower intestine

text: feacal matter

text: France

characteristic: geographic location (country and/or sea)

text: stool

text: human-gut

text: metagenome

text: Homo sapiens

text: INFANT MICROBIOME OVERTIME

text: Homo sapiens

text: Illumina

characteristic: sequencing method

text: Synbiotic Formula

characteristic: special diet


text: TUM

text: public

text: human

characteristic: common name

text: Vaginal

characteristic: delivery

text: Stool sample from infant 34-004 born with Vaginal delivery, at month 36 of age, been fed Synbiotic Formula

characteristic: description

text: human gut

characteristic: environment (biome)

text: lower intestine

characteristic: environment (feature)

text: feacal matter

characteristic: environment (material)

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: stool

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: Homo sapiens

characteristic: organism

text: INFANT MICROBIOME OVERTIME

text: Homo sapiens

text: Illumina

text: Synbiotic Formula

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TUM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: human

text: Caesarean

text: Stool sample from infant 39-031 born with Caesarean delivery, at month 36 of age, been fed Synbiotic Formula

text: human gut

text: lower intestine

text: feacal matter

text: France

characteristic: geographic location (country and/or sea)

text: stool

text: human-gut

text: metagenome

characteristic: investigation type

text: Homo sapiens

text: INFANT MICROBIOME OVERTIME

characteristic: project name

text: Homo sapiens

text: Illumina

text: Synbiotic Formula


text: TUM

text: public

text: human

characteristic: common name

text: Vaginal

characteristic: delivery

text: Stool sample from infant 39-019 born with Vaginal delivery, at month 36 of age, been fed Breast Milk

characteristic: description

text: human gut

characteristic: environment (biome)

text: lower intestine

characteristic: environment (feature)

text: feacal matter

characteristic: environment (material)

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: stool

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: Homo sapiens

text: INFANT MICROBIOME OVERTIME

text: Homo sapiens

text: Illumina

characteristic: sequencing method

text: Breast Milk

characteristic: special diet


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TUM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: human

text: Vaginal

text: Stool sample from infant 39-038 born with Vaginal delivery, at month 36 of age, been fed Breast Milk

text: human gut

text: lower intestine

text: feacal matter

text: France

characteristic: geographic location (country and/or sea)

text: stool

text: human-gut

text: metagenome

text: Homo sapiens

characteristic: organism

text: INFANT MICROBIOME OVERTIME

text: Homo sapiens

text: Illumina

text: Breast Milk

characteristic: title


text: TUM

text: public

text: human

characteristic: common name

text: Vaginal

characteristic: delivery

text: Stool sample from infant 39-039 born with Vaginal delivery, at month 36 of age, been fed Synbiotic Formula

characteristic: description

text: human gut

characteristic: environment (biome)

text: lower intestine

characteristic: environment (feature)

text: feacal matter

characteristic: environment (material)

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: stool

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: Homo sapiens

text: INFANT MICROBIOME OVERTIME

characteristic: project name

text: Homo sapiens

text: Illumina

text: Synbiotic Formula


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TUM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: human

text: Vaginal

text: Stool sample from infant 39-034 born with Vaginal delivery, at month 36 of age, been fed Breast Milk

text: human gut

text: lower intestine

text: feacal matter

text: France

characteristic: geographic location (country and/or sea)

text: stool

text: human-gut

text: metagenome

text: Homo sapiens

text: INFANT MICROBIOME OVERTIME

text: Homo sapiens

text: Illumina

characteristic: sequencing method

text: Breast Milk

characteristic: special diet


text: TUM

text: public

text: human

characteristic: common name

text: Caesarean

characteristic: delivery

text: Stool sample from infant 39-026 born with Caesarean delivery, at month 36 of age, been fed Control Formula

characteristic: description

text: human gut

characteristic: environment (biome)

text: lower intestine

characteristic: environment (feature)

text: feacal matter

characteristic: environment (material)

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: stool

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: Homo sapiens

characteristic: organism

text: INFANT MICROBIOME OVERTIME

text: Homo sapiens

text: Illumina

text: Control Formula

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: TUM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: human

text: Vaginal

text: Stool sample from infant 39-029 born with Vaginal delivery, at month 36 of age, been fed Breast Milk

text: human gut

text: lower intestine

text: feacal matter

text: France

characteristic: geographic location (country and/or sea)

text: stool

text: human-gut

text: metagenome

characteristic: investigation type

text: Homo sapiens

text: INFANT MICROBIOME OVERTIME

characteristic: project name

text: Homo sapiens

text: Illumina

text: Breast Milk


text: TUM

text: public

text: human

characteristic: common name

text: Vaginal

characteristic: delivery

text: Stool sample from infant 39-018 born with Vaginal delivery, at month 36 of age, been fed Synbiotic Formula

characteristic: description

text: human gut

characteristic: environment (biome)

text: lower intestine

characteristic: environment (feature)

text: feacal matter

characteristic: environment (material)

text: France

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: host age

text: stool

characteristic: host body product

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

text: Homo sapiens

text: INFANT MICROBIOME OVERTIME

text: Homo sapiens

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