text: AZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: not collected

text: human

characteristic: description

text: breast cancer

characteristic: disease

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: model

characteristic: model aliase

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: TAATACAG-ATATTCAC

text: PD


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: AZ

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: Protocols: Samples were harvested in 1 mL of QIAzol lysis buffer and snap frozen. RNA was extracted using RNeasy 96 QIAcube HT total RNA Cell with DNAse treatment, and samples randomized over 96-well plates. RNA was quantified using the Qubit RNA BR kit (Q10213 Invitrogen), according to the manufacturer’s instructions. The Illumina Truseq stranded mRNA library was generated by the Cancer Research UK Cambridge Institute Genomic core facility

text: breast cancer

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: sample barcode

characteristic: sample pooling

text: Homo sapiens

text: GCTTGTCA-GAACATAC

characteristic: sequence

text: PD

characteristic: study type

characteristic: title


text: AZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: not collected

text: human

characteristic: description

text: breast cancer

characteristic: disease

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: model

characteristic: model aliase

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: ATCCACTG-AGGTGCGT

text: PD


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: AZ

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: breast cancer

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: GACCTGAA-TTGGTGAG

text: PD


text: AZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: not collected

text: human

text: breast cancer

text: not collected

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: sample barcode

characteristic: sample pooling

text: Homo sapiens

text: CCAAGTCT-AAGGATGA

characteristic: sequence

text: PD

characteristic: study type

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: AZ

text: public

text: ArrayExpress

text: not collected

text: human

characteristic: description

text: breast cancer

characteristic: disease

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: model

characteristic: model aliase

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: TTATAACC-GATATCGA

text: PD


text: AZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: breast cancer

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: TCTCTACT-CGCGGTTC

text: PD


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: AZ

text: public

text: ArrayExpress

text: not collected

text: human

text: breast cancer

text: not collected

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: sample barcode

characteristic: sample pooling

text: Homo sapiens

text: AATCCGGA-CTACAGTT

characteristic: sequence

text: PD

characteristic: study type

characteristic: title


text: AZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: not collected

text: human

characteristic: description

text: breast cancer

characteristic: disease

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: model

characteristic: model aliase

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: GCACGGAC-GTCTCGCA

text: PD


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: AZ

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: breast cancer

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: TTATAACC-GATATCGA

text: efficacy


text: AZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: not collected

text: human

text: breast cancer

text: not collected

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: sample barcode

characteristic: sample pooling

text: Homo sapiens

text: TGGATCGA-GTGCGATA

characteristic: sequence

text: efficacy

characteristic: study type

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: AZ

text: public

text: ArrayExpress

text: not collected

text: human

characteristic: description

text: breast cancer

characteristic: disease

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: model

characteristic: model aliase

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: TTGGACTC-GGAAGCAG

text: efficacy


text: AZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: breast cancer

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: GCACGGAC-GTCTCGCA

text: efficacy


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: AZ

text: public

text: ArrayExpress

text: not collected

text: human

text: breast cancer

text: not collected

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: sample barcode

characteristic: sample pooling

text: Homo sapiens

text: CCGCGGTT-AGCGCTAG

characteristic: sequence

text: efficacy

characteristic: study type

characteristic: title


text: AZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: not collected

text: human

characteristic: description

text: breast cancer

characteristic: disease

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: model

characteristic: model aliase

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: CAAGCTAG-ACATAGCG

text: efficacy


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: AZ

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: breast cancer

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: CCAAGTCT-AAGGATGA

text: efficacy


text: AZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: not collected

text: human

text: breast cancer

text: not collected

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: sample barcode

characteristic: sample pooling

text: Homo sapiens

text: ATGTAAGT-ACTCTATG

characteristic: sequence

text: efficacy

characteristic: study type

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: AZ

text: public

text: E-MTAB-13139:START1701701_Fulvestrant_4_1

text: ArrayExpress

text: not collected

text: human

characteristic: description

text: breast cancer

characteristic: disease

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: model

characteristic: model aliase

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: GGACTTGG-CGCAGACG

text: efficacy


text: AZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13139:START1701701_Fulvestrant_4_2

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: breast cancer

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: AGTTCAGG-CCAACAGA

text: efficacy


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: AZ

text: public

text: E-MTAB-13139:START1701701_Fulvestrant_4_3

text: ArrayExpress

text: not collected

text: human

text: breast cancer

text: not collected

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: sample barcode

characteristic: sample pooling

text: Homo sapiens

text: GGCTTAAG-TCGTGACC

characteristic: sequence

text: efficacy

characteristic: study type

characteristic: title


text: AZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-13139:START1701701_Fulvestrant_4_4

text: ArrayExpress

text: not collected

text: human

characteristic: description

text: breast cancer

characteristic: disease

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: model

characteristic: model aliase

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: GGTACCTT-AAGACGTC

text: efficacy


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: AZ

text: public

characteristic: SRA accession

text: E-MTAB-13139:START1701701_Fulvestrant_72_1

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: breast cancer

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: AAGTCCAA-TATGAGTA

text: efficacy


text: AZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-13139:START1701701_Fulvestrant_72_2

text: ArrayExpress

text: not collected

text: human

text: breast cancer

text: not collected

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: sample barcode

characteristic: sample pooling

text: Homo sapiens

text: GACCTGAA-TTGGTGAG

characteristic: sequence

text: efficacy

characteristic: study type

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: AZ

text: public

text: E-MTAB-13139:START1701701_Fulvestrant_72_3

text: ArrayExpress

text: not collected

text: human

characteristic: description

text: breast cancer

characteristic: disease

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: model

characteristic: model aliase

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: AATCCGGA-CTACAGTT

text: efficacy


text: AZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13139:START1701701_Fulvestrant_72_4

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: breast cancer

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: AACGTTCC-GGAGTACT

text: efficacy


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: AZ

text: public

text: ArrayExpress

text: not collected

text: human

text: breast cancer

text: not collected

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: sample barcode

characteristic: sample pooling

text: Homo sapiens

text: ATGAGGCC-GTTAATTG

characteristic: sequence

text: efficacy

characteristic: study type

characteristic: title


text: AZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: not collected

text: human

characteristic: description

text: breast cancer

characteristic: disease

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: model

characteristic: model aliase

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: GCTTGTCA-GAACATAC

text: efficacy


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: AZ

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: breast cancer

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: CTCTCGTC-TATAACCT

text: efficacy


text: AZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: not collected

text: human

text: breast cancer

text: not collected

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: sample barcode

characteristic: sample pooling

text: Homo sapiens

text: CGGCGTGA-GCGCCTGT

characteristic: sequence

text: efficacy

characteristic: study type

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: AZ

text: public

text: ArrayExpress

text: not collected

text: human

characteristic: description

text: breast cancer

characteristic: disease

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: model

characteristic: model aliase

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: GCAGAATT-ACCGGCCA

text: efficacy


text: AZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: breast cancer

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: ATCCACTG-AGGTGCGT

text: efficacy


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: AZ

text: public

text: ArrayExpress

text: not collected

text: human

text: breast cancer

text: not collected

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: sample barcode

characteristic: sample pooling

text: Homo sapiens

text: TCTCTACT-CGCGGTTC

characteristic: sequence

text: efficacy

characteristic: study type

characteristic: title


text: AZ

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: not collected

text: human

characteristic: description

text: breast cancer

characteristic: disease

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: model

characteristic: model aliase

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: TAATACAG-ATATTCAC

text: efficacy


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

tag: Namespace:Department of Immunology, Genetics and Pathology, Cancer Precision Medicine

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: plasma cell

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: Protocols: The MM authenticated cell line INA-6 were selected for UNC1999 treatment. 100,000 cells/mL was seeded into flasks. 24h post seeding 1 µM of UNC1999 or DMSO (Sigma-Aldrich; cat. No 317275) was added to the cells. Media, supplements, and drug were renewed every 3rd day until end point and day 5. All experiments were conducted in 3 biological triplicates. RNA extraction was done by utilizing RNeasy Micro and/or Mini Kit (Netherlands, Qiagen; cat. no 74004/74104). 1 µg of total RNA was used for sequencing library preparation using TruSeq stranded total RNA library preparation kit with ribosomal depletion using RiboZero Gold (Illumina Inc.).

text: adult

characteristic: developmental stage

text: multiple myeloma

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: bone marrow

characteristic: organism part

text: Homo sapiens

text: male

characteristic: sex


text: Department of Immunology, Genetics and Pathology, Cancer Precision Medicine

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: plasma cell

text: not collected

text: human

characteristic: description

text: adult

text: multiple myeloma

characteristic: disease

text: not collected

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: male

characteristic: title


E-MTAB-13135:RIP Input

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

text: E-MTAB-13135:RIP Input

tag: Namespace:Science for Life Laboratory, Department of Immunology, Genetic and Pathology, Rudbeck Laboratory, Uppsala University, Uppsala, Sweden.

text: ArrayExpress

text: plasma cell

text: not collected

text: human

text: Protocols: RNA immunoprecipitation was conducted utilizing Magna Nuclear RIP kit (Millipore; Billerica, MA, USA; cat. no 17‐10520 ). Immunoprecipitation of EZH2 targets was conducted by incubating the samples with 5 µg of anti-EZH2 (cat. no 17-662, Millipore) and anti-IgG Mouse (cat. no CS200621, Millipore) RNA was purified and cleaned by using RNeasy Micro Kit (Netherlands, Qiagen; cat. no 74004) 100 ng of RNA was used for sample library preparation using TruSeq Stranded Total RNA Gold (Illumina) with non-poly-A selection.

text: adult

text: multiple myeloma

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: male

text: RIP Input


text: Science for Life Laboratory, Department of Immunology, Genetic and Pathology, Rudbeck Laboratory, Uppsala University, Uppsala, Sweden.

text: public

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: plasma cell

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: adult

characteristic: developmental stage

text: multiple myeloma

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: Homo sapiens

text: male


text: Senckenberg am Meer

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Senckenberg am Meer

text: Tissue sample of hydrothermal vent gastropod

text: Indian Ocean

text: Vent Field 2, Central Indian Ridge

characteristic: geographic location (region and locality)

text: Anatoma declivis

text: Anatoma declivis


text: Homo sapiens

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

text: SC

text: public

text: not provided

text: human

text: United Kingdom

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BSC (Barcelona Supercomputer Center)

text: public

characteristic: SRA accession

tag: Namespace:BSC (Barcelona Supercomputer Center)

text: CNAG-CRG

text: Neiker

text: Neiker

characteristic: collecting institution

text: Not applicable

text: Spain

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: azkarate,elgoibar

text: Pine tree forest

characteristic: habitat

characteristic: lifestage

text: Lecanosticta acicola

characteristic: organism part

characteristic: original collection date

text: Lecanosticta acicola

characteristic: sex

text: Lecanosticta acicola DNA sample


characteristic: ENA-CHECKLIST

text: BSC (Barcelona Supercomputer Center)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: CNAG-CRG

characteristic: broker name

text: Neiker

text: Neiker

characteristic: collection date

text: Not applicable

characteristic: common name

text: Spain

characteristic: geographic location (country and/or sea)

text: IRISASI

characteristic: geographic location (region and locality)

text: Pine tree forest

text: Lecanosticta acicola

text: Lecanosticta acicola

text: Lecanosticta acicola DNA sample


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BSC (Barcelona Supercomputer Center)

text: public

characteristic: SRA accession

text: CNAG-CRG

text: Neiker

text: Neiker

characteristic: collecting institution

text: Not applicable

text: Spain

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: itsaso

text: Pine tree forest

text: Lecanosticta acicola

characteristic: organism

text: Lecanosticta acicola

text: Lecanosticta acicola DNA sample

characteristic: title


characteristic: ENA-CHECKLIST

text: BSC (Barcelona Supercomputer Center)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: CNAG-CRG

text: Neiker

text: Neiker

text: Not applicable

text: Spain

text: Pine tree forest

characteristic: habitat

characteristic: lifestage

text: Lecanosticta acicola

characteristic: organism part

characteristic: original collection date

text: Lecanosticta acicola

characteristic: sex

text: Lecanosticta acicola DNA sample


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Luisa Paez

text: public

characteristic: SRA accession

tag: Namespace:Luisa Paez

characteristic: collection date

text: Santander

characteristic: department

text: Partial tick

characteristic: description

text: Colombia

characteristic: geographic location (country and/or sea)

text: Rhipicephalus sanguineus sensu lato Rs129

text: Hembra


characteristic: ENA-CHECKLIST

text: Luisa Paez

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Santander

text: Partial tick

text: Colombia

characteristic: organism

text: Macho

characteristic: title


text: Luisa Paez

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Casanare

text: Partial tick

text: Colombia

text: Hembra


text: Luisa Paez

text: public

text: Casanare

text: Partial tick

text: Colombia

text: Macho

characteristic: sex


E-MTAB-13150:Sample 1

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-13150:Sample 1

tag: Namespace:Center for Biotechnology - Bielefeld University

text: ArrayExpress

characteristic: broker name

text: not collected

text: Protocols: To collect E. larynx, two standard nylon net samples (30 x 50 cm) were submerged at 10 m depth between net pens at the SINTEF ACE research salmon farm site in Vinjefjorden, mid Norway, on 11th of August 2020. The samples were photographed weekly to monitor growth and were retrieved 23 days later, on 3rd of September. Samples were transferred to the SINTEF SeaLab laboratory in Trondheim in seawater and stored over night at 2°C. Taxonomic identification was carried out the following day based on Schuchert (2010), using a dissecting microscope. Individual hydroid polyps were cleaned of other biofouling organisms (e.g., algae) or associated fauna (e.g., caprellid shrimp) using pure ethanol. Total RNA was extracted from two samples of E. larynx using ZymoBIOMICS RNA Miniprep Kit (Zymo Research), following kit instructions. The RNA output was then reverse transcribed to cDNA using QuantaBio qScript cDNA SuperMix (Quantabio) following manufacturer protocol. Two polyA enriched mRNA libraries were built using TruSeq stranded mRNA kit (Illumina) according to the library prep kit instructions.

text: mixed

characteristic: developmental stage

characteristic: environmental history

text: wild type genotype

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Ectopleura larynx

text: Ectopleura larynx

text: whole organism

characteristic: organism part

text: Ectopleura larynx

text: Sample 1


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF SZEGED

text: public

characteristic: SRA accession

tag: Namespace:UNIVERSITY OF SZEGED

text: SLK

text: carcinoma

characteristic: collection date

characteristic: description

text: USA

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host scientific name

text: human cell line

text: Human gammaherpesvirus 8

text: Human gammaherpesvirus 8


characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Department of Systems Biology School of Life Sciences Southern University of Science And Technology

unit: hour

characteristic: age

text: ArrayExpress

text: not collected

text: zebrafish

characteristic: common name

text: Protocols: Staged embryos were transferred into 10cm dish on ice. The chorion was physically disrupted and removed by tweezers. Then the majority of the yolk was physically removed using a tweezer. The remaining embryonic cells were washed with PBS and incubated in the deyolk buffer. When single cells became dissociated, they were transferred into a new eppendorf tube and washed with PBS for three times. Nuclei acid was extracted first using a Qiagen PCR purification column. Then 1× VAHTS DNA cleaning beads were used to remove primer leftover and eluted in 20 μl Nuclease-free Water. 50,000 single cells were resuspended in 50 uL RSB + 0.01% digitonin 0.1% Tween-20 and 0.1% NP-40 and incubated on ice for 3 minutes. Then 1 mL of cold RSB + 0.1% Tween-20 (without digitonin and NP-40) was added. The permeabilised cells were centrifuged at 300 g 4 C. After removing the supernatant, 50 ul tagmentation mix was used to resuspend the cell pellet and incubated at 37C on a thermomixer for 30 minutes. Then 50 ul 20mM EDTA was added to stop the reaction. Single cells were sorted into each well of a plate containing distinct well index primers using FACS. 2x NEBNext PCR Master Mix was added into each well to perform PCR for the library construction. The PCR condition is: 72 C 5 minutes, 98 C 2 minutes, then 12 cycles of [98 C 10 seconds, 63 C 30 seconds, 72 C 20 seconds].

text: blastula 1k-cell

text: normal

characteristic: disease

text: wild type genotype

text: not collected

characteristic: hours post fertilisation (hpf)

text: not applicable

text: Danio rerio

characteristic: organism

text: Danio rerio

text: embryonic structure

text: Danio rerio

text: mixed

text: Tubingen

characteristic: strain

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Department of Systems Biology School of Life Sciences Southern University of Science And Technology

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

text: zebrafish

text: blastula 1k-cell

characteristic: developmental stage

text: normal

text: wild type genotype

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Danio rerio

text: Danio rerio

text: embryonic structure

characteristic: organism part

text: Danio rerio

text: mixed

characteristic: sex

text: Tubingen


characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: age

text: ArrayExpress

text: not collected

characteristic: collection date

text: zebrafish

characteristic: common name

characteristic: description

text: blastula high

text: normal

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Danio rerio

text: Danio rerio

text: embryonic structure

text: Danio rerio

text: mixed

text: Tubingen


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Bi-cultures grown on 20 mM butyrate and N2/CO2 (80:20 v/v) in CP media. Isolation at 10 mM butyrate.

characteristic: Further Details2

text: public

characteristic: SRA accession

tag: Namespace:WAGENINGEN UNIVERSITY, LABORATORY OF MICROBIOLOGY

characteristic: Submitter Id

text: Transcriptome of a bi-culture of syntrophomonas wolfei and Methanospirillum hungatei replicate 1

text: Netherlands

text: Wageningen

characteristic: geographic location (region and locality)

text: Bi-culture of syntrophomonas wolfei and Methanospirillum hungatei

text: RNAseq on HiSeq-PE150 Prokaryotic Strand-Specific Transcriptome Library

characteristic: links to additional analysis

text: Syntrophomonas wolfei subsp. wolfei str. Goettingen G311

characteristic: organism

text: RNAseq

characteristic: protocol

characteristic: receipt date

text: S. wolfei subsp wolfei str. G311. M. hungatei str. JF1.

characteristic: title


characteristic: ENA-CHECKLIST

text: WAGENINGEN UNIVERSITY, LABORATORY OF MICROBIOLOGY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Transcriptome of a bi-culture of syntrophomonas wolfei and Methanospirillum hungatei replicate 2

text: Netherlands

text: Wageningen

characteristic: isolate

text: RNAseq


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: collection date

text: Transcriptome of a bi-culture of syntrophomonas wolfei and Methanospirillum hungatei replicate 3

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Wageningen

text: RNAseq


characteristic: External Id

characteristic: Further Details2

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Transcriptome of a bi-culture of syntrophomonas wolfei and Methanospirillum hungatei replicate 4

text: Netherlands

text: Wageningen

characteristic: geographic location (region and locality)

text: RNAseq


text: Tri-cultures grown on 20 mM butyrate and N2/CO2 (80:20 v/v) in CP media. Isolation at 10 mM butyrate.

text: public

text: Transcriptome of a tri-culture of syntrophomonas wolfei and methanospirillum hungatei and Methanothrix soengenii replicate 1

text: Netherlands

text: Wageningen

text: Tri-culture of syntrophomonas wolfei and methanospirillum hungatei and Methanothrix soengenii

characteristic: links to additional analysis

characteristic: organism

text: RNAseq

characteristic: protocol

characteristic: receipt date

text: S. wolfei subsp wolfei str. G311. M. hungatei str. JF1. M. soehngenii str. GP10

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Transcriptome of a tri-culture of syntrophomonas wolfei and methanospirillum hungatei and Methanothrix soengenii replicate 2

text: Netherlands

text: Wageningen

text: RNAseq

text: S. wolfei subsp wolfei str. G311. M. hungatei str. JF1. M. soehngenii str. GP11


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: collection date

text: Transcriptome of a tri-culture of syntrophomonas wolfei and methanospirillum hungatei and Methanothrix soengenii replicate 3

characteristic: description

text: Netherlands

text: Wageningen

characteristic: isolate

text: RNAseq

text: S. wolfei subsp wolfei str. G311. M. hungatei str. JF1. M. soehngenii str. GP12


characteristic: External Id

characteristic: Further Details2

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Transcriptome of a tri-culture of syntrophomonas wolfei and methanospirillum hungatei and Methanothrix soengenii replicate 4

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Wageningen

text: RNAseq

text: S. wolfei subsp wolfei str. G311. M. hungatei str. JF1. M. soehngenii str. GP13


text: Department of Systems Biology School of Life Sciences Southern University of Science And Technology

text: public

characteristic: age

text: ArrayExpress

characteristic: broker name

text: not collected

text: zebrafish

characteristic: common name

text: Protocols: Staged embryos were transferred into 10cm dish on ice. The chorion was physically disrupted and removed by tweezers. Then the majority of the yolk was physically removed using a tweezer. The remaining embryonic cells were washed with PBS and incubated in the deyolk buffer. When single cells became dissociated, they were transferred into a new eppendorf tube and washed with PBS for three times. Nuclei acid was extracted first using a Qiagen PCR purification column. Then 1× VAHTS DNA cleaning beads were used to remove primer leftover and eluted in 20 μl Nuclease-free Water. 50,000 single cells were resuspended in 50 uL RSB + 0.01% digitonin 0.1% Tween-20 and 0.1% NP-40 and incubated on ice for 3 minutes. Then 1 mL of cold RSB + 0.1% Tween-20 (without digitonin and NP-40) was added. The permeabilised cells were centrifuged at 300 g 4 C. After removing the supernatant, 50 ul tagmentation mix was used to resuspend the cell pellet and incubated at 37C on a thermomixer for 30 minutes. Then 50 ul 20mM EDTA was added to stop the reaction. Single cells were sorted into each well of a plate containing distinct well index primers using FACS. 2x NEBNext PCR Master Mix was added into each well to perform PCR for the library construction. The PCR condition is: 72 C 5 minutes, 98 C 2 minutes, then 12 cycles of [98 C 10 seconds, 63 C 30 seconds, 72 C 20 seconds].

text: blastula oblong

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: hours post fertilisation (hpf)

text: not applicable

text: Danio rerio

characteristic: organism

text: Danio rerio

text: embryonic structure

characteristic: organism part

text: Danio rerio

text: mixed

characteristic: sex

text: Tubingen

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:University of Bern, Interfaculty Bioinformatics Unit

text: over 18

unit: year

text: ArrayExpress

text: not collected

characteristic: collection date

text: human

text: Protocols: Palatal connective tissue grafts (CTGs) from four groups 1) anterior deep (AD), 2) anterior superficial (AS), 3) posterior deep (PD), and 4) posterior superficial (PS) were obtained from 16 systemically and periodontally healthy subjects per group. The Ethics Committee, Bern, Switzerland (ethical code ID 2018-00661 from 13.08.2018) approved the study, and informed consent was obtained from all patients. The CTGs were biopsied during recession coverage surgeries performed by the same periodontist (Prof. Dr. Sculean). CTGs harvested in the region of lateral incisor, canine and premolars are designated as anterior (A), whereas CTGs harvested in the molars’ area are designated as posterior (P). At each location, the tissue sample was harvested in toto as a free gingival graft (~6x4 mm). Subsequently, the epithelial layer of ~0.5 mm was removed by sharp dissection using a C15 blade and the CTG was split into two thinner grafts – a superficial (S) located immediately subepithelially and a deep (D) located closer to the bone. Immediately after the excision, ~1/3 of each tissue sample was immediately placed in RNAlater (ThermoFisher Scientific, Basel, Switzerland) for 20 h before tissue homogenization using gentleMACS Dissociator (Miltenyi Biotec, Bergisch Gladbach, Germany) followed by RNA extraction using the RNeasy Fibrous Tissue Mini Kit (Qiagen, Basel, Switzerland). Quantity and quality of RNA extracted from each of the 64 collected CTGs was assessed using the Qubit RNA BR Assay Kit on a Qubit 4.0 fluorometer (ThermoFisher Scientific) as well as the Fragment Analyzer RNA Kit on an Advanced Analytical Fragment Analyzer System (Agilent Technologies, Basel, Switzerland). Sequencing libraries were produced using an illumina TruSeq Stranded mRNA Library Prep kit in combination with TruSeq RNA UD Indexes according to illumina’s guidelines (Illumina, San Diego, CA, USA).

characteristic: description

text: adult

text: normal

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: palate

text: anterior deep palate

characteristic: sampling site

text: Homo sapiens

text: not available

characteristic: title


characteristic: External Id

text: University of Bern, Interfaculty Bioinformatics Unit

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: over 18

characteristic: age

text: ArrayExpress

characteristic: broker name

text: not collected

text: human

characteristic: common name

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: palate

text: anterior deep palate

text: Homo sapiens

text: not available


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: over 18

text: ArrayExpress

text: not collected

text: human

text: adult

text: normal

text: not collected

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: palate

characteristic: organism part

text: anterior superficial palate

text: Homo sapiens

text: not available

characteristic: sex


characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: over 18

text: ArrayExpress

text: not collected

characteristic: collection date

text: human

characteristic: description

text: adult

text: normal

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: palate

text: posterior deep palate

characteristic: sampling site

text: Homo sapiens

text: not available

characteristic: title


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: over 18

characteristic: age

text: ArrayExpress

characteristic: broker name

text: not collected

text: human

characteristic: common name

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: palate

text: posterior superficial palate

text: Homo sapiens

text: not available


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE

characteristic: TITLE

text: Candida auris

text: Portugal

text: Human

characteristic: host common name

text: [Candida] auris

characteristic: organism

text: [Candida] auris


characteristic: External Id

text: Justus Liebig University of Giessen

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Justus Liebig University of Giessen

characteristic: collection date

text: alpaca

text: Black, male

characteristic: description

text: Germany

text: Vicugna pacos

text: Vicugna pacos

text: Alpaca 1

characteristic: title


text: Justus Liebig University of Giessen

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: alpaca

characteristic: common name

text: White, female

text: Germany

text: Vicugna pacos

text: Vicugna pacos

text: Alpaca 2


characteristic: ENA-CHECKLIST

text: Justus Liebig University of Giessen

text: public

text: alpaca

text: Brown and white, female

text: Germany

characteristic: geographic location (country and/or sea)

text: Vicugna pacos

text: Vicugna pacos

text: Alpaca 3


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Justus Liebig University of Giessen

text: public

text: alpaca

text: White, male

text: Germany

text: Vicugna pacos

text: Vicugna pacos

text: Alpaca 4


text: Justus Liebig University of Giessen

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: alpaca

text: White, female

text: Germany

text: Vicugna pacos

text: Vicugna pacos

text: Alpaca 5


text: Justus Liebig University of Giessen

text: public

text: alpaca

text: Grey, male

text: Germany

text: Vicugna pacos

text: Vicugna pacos

text: Alpaca 6


text: Justus Liebig University of Giessen

text: public

text: alpaca

text: Fawn, female

text: Germany

text: Vicugna pacos

text: Vicugna pacos

text: Alpaca 7


text: Justus Liebig University of Giessen

text: public

text: alpaca

text: Black and white, male

text: Germany

text: Vicugna pacos

text: Vicugna pacos

text: Alpaca 8


text: Justus Liebig University of Giessen

text: public

text: alpaca

text: White, female

text: Germany

text: Vicugna pacos

text: Vicugna pacos

text: Alpaca 9


text: Institute of Microbiology, ETH Zurich

text: public

tag: Namespace:Institute of Microbiology, ETH Zurich

text: RB-TnSeq data for SL1344 mutant library 4 day infection model in LCM mice

text: Switzerland

text: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344


text: Wetsus

text: public

characteristic: broad-scale environmental context

text: Charcoal

characteristic: environmental medium

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: local environmental context

text: activated carbon metagenome

characteristic: project name

text: activated carbon metagenome


characteristic: External Id

text: Wetsus

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: BODAC_1_Backwashed_granule_FastDNA_method

characteristic: description

text: Charcoal

text: Netherlands

text: activated carbon metagenome

characteristic: organism

text: activated carbon metagenome


characteristic: ENA-CHECKLIST

text: Wetsus

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: BODAC_2_Backwashed_granule_FastDNA_method

text: Charcoal

text: Netherlands

characteristic: geographic location (country and/or sea)

text: activated carbon metagenome

text: activated carbon metagenome

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Wetsus

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: broad-scale environmental context

text: BODAC_1_Detached_biofilms_FastDNA_method

text: Charcoal

text: Netherlands

text: biofilm metagenome

text: biofilm metagenome


text: Wetsus

text: public

text: BODAC_2_Detached_biofilms_FastDNA_method

text: Charcoal

characteristic: environmental medium

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: local environmental context

text: biofilm metagenome

characteristic: project name

text: biofilm metagenome


characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: HP20.11.05 ASG 01

text: Tree of Life Programme

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Tree of Life Programme

text: aquatic biome

text: LUCIA PITA

characteristic: collected by

text: GEOMAR

characteristic: collecting institution

characteristic: collection date

unit: m

characteristic: depth

text: adult sponges tissue

text: Germany

unit: DD

text: GEOMAR Kiel

characteristic: geographic location (region and locality)

text: rocky shore

characteristic: habitat

text: adult

characteristic: host life stage

text: Halichondria panicea

characteristic: host scientific name

characteristic: host taxid

text: LUCIA PITA

characteristic: identified by

text: GEOMAR

text: marine benthic biome

text: sponge metagenome

text: **OTHER SOMATIC ANIMAL TISSUE**

characteristic: organism part

text: ASG

characteristic: sample derived from

text: sponge metagenome

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: N

characteristic: symbiont

text: 1ec2baac-d6fa-49ea-9a9d-8597dd1bf0b7-asg-metagenome

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: HP20.11.05 ASG 01

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: Hifiasm-Meta (version 0.3-r061); Hifiasm (version 0.13-r308)

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: DASTOOL (version 1.1.5); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: LUCIA PITA

text: GEOMAR

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

characteristic: contamination score

text: adult sponges tissue

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: GEOMAR Kiel

text: rocky shore

text: adult

text: Halichondria panicea

text: LUCIA PITA

text: GEOMAR

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Halichondria panicea

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Amylibacter sp.

characteristic: organism

text: **OTHER SOMATIC ANIMAL TISSUE**

text: ASG

characteristic: project name

text: uncultured Amylibacter sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: N

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

text: GTDB-TK (version 2.1.1); GTDB (release 207_v2)

characteristic: taxonomic classification

text: ANI

characteristic: taxonomic identity marker

text: ff3864a8-7d48-4393-9b75-04048a2dfb2c-asg-bin.62_sub


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: HP20.11.05 ASG 01

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: LUCIA PITA

characteristic: collected by

text: GEOMAR

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: depth

text: adult sponges tissue

text: Germany

text: GEOMAR Kiel

characteristic: geographic location (region and locality)

text: rocky shore

characteristic: habitat

text: adult

characteristic: host life stage

text: Halichondria panicea

characteristic: host scientific name

characteristic: host taxid

text: LUCIA PITA

characteristic: identified by

text: GEOMAR

text: metagenome-assembled genome

text: Sponge: Halichondria panicea

text: marine benthic biome

text: sponge metagenome

text: uncultured Amylibacter sp.

text: **OTHER SOMATIC ANIMAL TISSUE**

characteristic: organism part

text: ASG

characteristic: sample derived from

text: uncultured Amylibacter sp.

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: N

characteristic: symbiont

text: PROKKA (version 1.14.5)

text: ANI

text: e8784854-f525-48af-8b43-79faad8c87d5-asg-maxbin2.007


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: HP20.11.05 ASG 01

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: LUCIA PITA

text: GEOMAR

characteristic: completeness software

characteristic: contamination score

text: adult sponges tissue

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: GEOMAR Kiel

text: rocky shore

text: adult

text: Halichondria panicea

text: LUCIA PITA

text: GEOMAR

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Halichondria panicea

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Amylibacter sp.

characteristic: organism

text: **OTHER SOMATIC ANIMAL TISSUE**

text: ASG

characteristic: project name

text: uncultured Amylibacter sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: N

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: ANI

characteristic: taxonomic identity marker

text: c5adf102-499a-46b5-9d7b-e3540115f3a4-asg-MetaTOR_26_0


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: HP20.11.05 ASG 01

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: LUCIA PITA

characteristic: collected by

text: GEOMAR

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: depth

text: adult sponges tissue

text: Germany

text: GEOMAR Kiel

characteristic: geographic location (region and locality)

text: rocky shore

characteristic: habitat

text: adult

characteristic: host life stage

text: Halichondria panicea

characteristic: host scientific name

characteristic: host taxid

text: LUCIA PITA

characteristic: identified by

text: GEOMAR

text: metagenome-assembled genome

text: Sponge: Halichondria panicea

text: marine benthic biome

text: sponge metagenome

text: uncultured Amylibacter sp.

text: **OTHER SOMATIC ANIMAL TISSUE**

characteristic: organism part

text: ASG

characteristic: sample derived from

text: uncultured Amylibacter sp.

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: N

characteristic: symbiont

text: PROKKA (version 1.14.5)

text: ANI

text: 1753fa5e-bfb5-4446-b014-495cdc3cb3b0-asg-maxbin2.005


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: HP20.11.05 ASG 01

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: LUCIA PITA

text: GEOMAR

characteristic: completeness software

characteristic: contamination score

text: adult sponges tissue

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: GEOMAR Kiel

text: rocky shore

text: adult

text: Halichondria panicea

text: LUCIA PITA

text: GEOMAR

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Halichondria panicea

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Amylibacter sp.

characteristic: organism

text: **OTHER SOMATIC ANIMAL TISSUE**

text: ASG

characteristic: project name

text: uncultured Amylibacter sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: N

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: ANI

characteristic: taxonomic identity marker

text: 670f5e8c-6bab-43e0-ab1f-f10d262ce013-asg-MetaTOR_6_1_sub


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Wetsus

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: description

text: Charcoal

text: Netherlands

text: biofilm metagenome

text: biofilm metagenome

characteristic: title


text: Wetsus

text: public

text: Metal oxide

characteristic: environmental medium

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: local environmental context

text: manganese-oxidation enrichment culture

characteristic: organism

characteristic: project name

text: manganese-oxidation enrichment culture


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC center name

text: public

text: aquatic biome

text: KATHRIN BUSCH

characteristic: collected by

text: GEOMAR

characteristic: collecting institution

characteristic: depth

text: adult sponge tissue

text: Spain

characteristic: geographic location (region and locality)

text: canyon

characteristic: habitat

text: adult

characteristic: host life stage

text: Aphrocallistes beatrix

characteristic: host scientific name

characteristic: host taxid

text: PILAR RÌOS

characteristic: identified by

text: IEO, Spain

text: marine benthic biome

text: sponge metagenome

text: **OTHER SOMATIC ANIMAL TISSUE**

characteristic: organism part

text: ASG

characteristic: sample derived from

text: sponge metagenome

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: N

characteristic: symbiont

text: 73ad4b00-50e7-405c-83f8-5aa3851dc4fa-asg-metagenome

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Hifiasm (version 0.16.1-r375)

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: KATHRIN BUSCH

text: GEOMAR

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

characteristic: environmental medium

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: canyon

text: adult

text: Aphrocallistes beatrix

text: PILAR RÌOS

text: IEO, Spain

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Aphrocallistes beatrix

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Nitrosopumilaceae archaeon

characteristic: organism

text: **OTHER SOMATIC ANIMAL TISSUE**

text: ASG

characteristic: project name

text: uncultured Nitrosopumilaceae archaeon

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: N

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic novelty determined using RED

characteristic: taxonomic identity marker

text: a8c82f9a-74bf-455c-b605-ce0757614b71-asg-bin.103_sub


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Hifiasm (version 0.16.1-r375)

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: KATHRIN BUSCH

characteristic: collected by

text: GEOMAR

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: depth

text: adult sponge tissue

text: Spain

characteristic: geographic location (region and locality)

text: canyon

characteristic: habitat

text: adult

characteristic: host life stage

text: Aphrocallistes beatrix

characteristic: host scientific name

characteristic: host taxid

text: PILAR RÌOS

characteristic: identified by

text: IEO, Spain

text: metagenome-assembled genome

text: Sponge: Aphrocallistes beatrix

text: marine benthic biome

text: sponge metagenome

text: uncultured Gammaproteobacteria bacterium

text: **OTHER SOMATIC ANIMAL TISSUE**

characteristic: organism part

text: ASG

characteristic: sample derived from

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: N

characteristic: symbiont

text: PROKKA (version 1.14.5)

text: taxonomic classification defined by topology and ANI

text: 49078ec1-f955-4c91-8edf-646f5f16c493-asg-bin.36_sub


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Hifiasm (version 0.16.1-r375)

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: KATHRIN BUSCH

text: GEOMAR

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

characteristic: environmental medium

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: canyon

text: adult

text: Aphrocallistes beatrix

text: PILAR RÌOS

text: IEO, Spain

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Aphrocallistes beatrix

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Nitrosopumilaceae archaeon

characteristic: organism

text: **OTHER SOMATIC ANIMAL TISSUE**

text: ASG

characteristic: project name

text: uncultured Nitrosopumilaceae archaeon

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: N

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 4a4f73cf-fe84-4c84-a67c-407b737400c5-asg-CL03_sub


text: No

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: Hifiasm (version 0.16.1-r375)

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: KATHRIN BUSCH

characteristic: collected by

text: GEOMAR

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: depth

text: adult sponge tissue

text: Spain

characteristic: geographic location (region and locality)

text: canyon

characteristic: habitat

text: adult

characteristic: host life stage

text: Aphrocallistes beatrix

characteristic: host scientific name

characteristic: host taxid

text: PILAR RÌOS

characteristic: identified by

text: IEO, Spain

text: metagenome-assembled genome

text: Sponge: Aphrocallistes beatrix

text: marine benthic biome

text: sponge metagenome

text: **OTHER SOMATIC ANIMAL TISSUE**

characteristic: organism part

text: ASG

characteristic: sample derived from

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: N

characteristic: symbiont

text: PROKKA (version 1.14.5)

text: 0bc79e51-2d25-43cd-bb6d-9e6636b23871-asg-CL05


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Hifiasm (version 0.16.1-r375)

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: DASTOOL (version 1.1.5); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: KATHRIN BUSCH

text: GEOMAR

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

characteristic: environmental medium

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: canyon

text: adult

text: Aphrocallistes beatrix

text: PILAR RÌOS

text: IEO, Spain

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Aphrocallistes beatrix

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Nitrosopumilaceae archaeon

characteristic: organism

text: **OTHER SOMATIC ANIMAL TISSUE**

text: ASG

characteristic: project name

text: uncultured Nitrosopumilaceae archaeon

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: N

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic novelty determined using RED

characteristic: taxonomic identity marker

text: 701d10e8-8771-4200-82c2-f8919d42e917-asg-CL07


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Hifiasm (version 0.16.1-r375)

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: KATHRIN BUSCH

characteristic: collected by

text: GEOMAR

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: depth

text: adult sponge tissue

text: Spain

characteristic: geographic location (region and locality)

text: canyon

characteristic: habitat

text: adult

characteristic: host life stage

text: Aphrocallistes beatrix

characteristic: host scientific name

characteristic: host taxid

text: PILAR RÌOS

characteristic: identified by

text: IEO, Spain

text: metagenome-assembled genome

text: Sponge: Aphrocallistes beatrix

text: marine benthic biome

text: sponge metagenome

text: uncultured Nitrosopumilaceae archaeon

text: **OTHER SOMATIC ANIMAL TISSUE**

characteristic: organism part

text: ASG

characteristic: sample derived from

text: uncultured Nitrosopumilaceae archaeon

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: N

characteristic: symbiont

text: PROKKA (version 1.14.5)

text: GTDB-TK (version 2.1.1); GTDB (release 207_v2)

text: cd7ae85c-392c-454f-85f4-f85fcb8fe5c0-asg-CL08


text: No

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Hifiasm (version 0.16.1-r375)

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: KATHRIN BUSCH

text: GEOMAR

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

characteristic: environmental medium

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: canyon

text: adult

text: Aphrocallistes beatrix

text: PILAR RÌOS

text: IEO, Spain

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Aphrocallistes beatrix

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Nitrosopumilaceae archaeon

characteristic: organism

text: **OTHER SOMATIC ANIMAL TISSUE**

text: ASG

characteristic: project name

text: uncultured Nitrosopumilaceae archaeon

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: N

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic classification fully defined by topology

characteristic: taxonomic identity marker

text: 37208bd5-057b-466d-81f4-eba18ab36470-asg-maxbin2.030


text: No

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Hifiasm (version 0.16.1-r375)

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: KATHRIN BUSCH

characteristic: collected by

text: GEOMAR

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: depth

text: adult sponge tissue

text: Spain

characteristic: geographic location (region and locality)

text: canyon

characteristic: habitat

text: adult

characteristic: host life stage

text: Aphrocallistes beatrix

characteristic: host scientific name

characteristic: host taxid

text: PILAR RÌOS

characteristic: identified by

text: IEO, Spain

text: metagenome-assembled genome

text: Sponge: Aphrocallistes beatrix

text: marine benthic biome

text: sponge metagenome

text: **OTHER SOMATIC ANIMAL TISSUE**

characteristic: organism part

text: ASG

characteristic: sample derived from

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: N

characteristic: symbiont

text: PROKKA (version 1.14.5)

text: fd1f8ac9-b383-4c2b-b7b3-11ed3a192f86-asg-MetaTOR_10_0_sub


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Hifiasm (version 0.16.1-r375)

characteristic: assembly software

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: KATHRIN BUSCH

text: GEOMAR

characteristic: completeness software

characteristic: contamination score

text: adult sponge tissue

characteristic: environmental medium

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: canyon

text: adult

text: Aphrocallistes beatrix

text: PILAR RÌOS

text: IEO, Spain

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Aphrocallistes beatrix

text: marine benthic biome

characteristic: local environmental context

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

characteristic: organism

text: **OTHER SOMATIC ANIMAL TISSUE**

text: ASG

characteristic: project name

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: N

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: e6521e62-914e-4a5f-a650-6247b6d43153-asg-MetaTOR_4_1


Halomonas sp. I5-271120

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Manchester

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Halomonas sp. I5-271120

tag: Namespace:University of Manchester

characteristic: Submitter Id

characteristic: collection date

text: Novel environmental isolate

characteristic: description

text: United Kingdom

text: Halomonas sp. I5.271120

text: Halomonas sp. I5.271120

text: Halomonas

characteristic: strain

text: whole genome sequence

characteristic: title


text: UNIVERSITY OF SZEGED

text: public

text: human

characteristic: common name

text: Romania

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: organism

text: Homo sapiens


characteristic: ENA-CHECKLIST

text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:555-17150

text: BFR

text: Escherichia coli isolated from beef meat sample, national monitoring in germany

text: Germany

text: healthy

characteristic: host health state

text: Bos taurus

characteristic: host scientific name

characteristic: isolate

text: Meat

text: Escherichia coli

text: Escherichia coli


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NORWEGIAN VETERINARY INSTITUTE

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:556-17151

text: NVI

text: Escherichia coli isolated from broiler faecal sample, longitudinal study in norway

text: Norway

text: healthy

text: Gallus gallus domesticus

text: 10-2016-40-16007_S23_L007_pilon_spades_1

text: Faecal

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:556-17152

text: NVI

text: Norway

text: healthy

text: Gallus gallus domesticus

text: Faecal

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:556-17153

characteristic: Submitter Id

text: NVI

characteristic: collection date

characteristic: description

text: Norway

text: healthy

text: Gallus gallus domesticus

text: 11-2016-40-16264_S24_L007_pilon_spades_1

text: Faecal

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:556-17154

text: NVI

text: Norway

characteristic: geographic location (country and/or sea)

text: healthy

text: Gallus gallus domesticus

text: Faecal

text: Escherichia coli

text: Escherichia coli

characteristic: title


characteristic: ENA-CHECKLIST

text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:556-17155

text: NVI

text: Norway

text: healthy

text: Gallus gallus domesticus

text: 12-2016-40-17027_S25_L007_pilon_spades_1

text: Faecal

text: Escherichia coli

characteristic: organism

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:556-17156

text: NVI

text: Norway

text: healthy

characteristic: host health state

text: Gallus gallus domesticus

characteristic: host scientific name

text: Faecal

text: Escherichia coli

text: Escherichia coli


characteristic: ENA-FIRST-PUBLIC

text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:556-17157

text: NVI

text: Norway

text: healthy

text: Gallus gallus domesticus

text: 13-2016-40-17018_S26_L007_pilon_spades_1

characteristic: isolate

text: Faecal

text: Escherichia coli

text: Escherichia coli


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:556-17158

text: NVI

text: Norway

text: healthy

text: Gallus gallus domesticus

text: 14-2016-40-17686_S27_L007_pilon_spades_1

text: Faecal

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:556-17159

text: NVI

text: Norway

text: healthy

text: Gallus gallus domesticus

text: 15-2016-40-17710_S28_L007_pilon_spades_1

text: Faecal

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:556-17160

text: NVI

text: Norway

text: healthy

text: Gallus gallus domesticus

text: 16-2016-40-17719_S29_L007_pilon_spades_1

text: Faecal

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:556-17161

characteristic: Submitter Id

text: NVI

text: Escherichia coli isolated from broiler faecal sample, longitudinal study in norway

text: Norway

text: healthy

text: Gallus gallus domesticus

text: 17-2016-40-17695_S30_L007_pilon_spades_1

text: Faecal

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:556-17162

text: NVI

characteristic: collection date

characteristic: description

text: Norway

text: healthy

text: Gallus gallus domesticus

text: Faecal

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:556-17163

text: BFR

text: Escherichia coli isolated from broiler faecal sample, national monitoring in germany

text: Germany

characteristic: geographic location (country and/or sea)

text: healthy

text: Gallus gallus domesticus

text: Faecal

text: Escherichia coli

text: Escherichia coli

characteristic: title


characteristic: ENA-CHECKLIST

text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:557-17164

text: BFR

text: Germany

text: healthy

text: Gallus gallus domesticus

text: Faecal

text: Escherichia coli

characteristic: organism

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:557-17165

text: BFR

text: Germany

text: healthy

characteristic: host health state

text: Gallus gallus domesticus

characteristic: host scientific name

text: Faecal

text: Escherichia coli

text: Escherichia coli


characteristic: ENA-FIRST-PUBLIC

text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:557-17166

text: NVI

text: Norway

text: healthy

text: Gallus gallus domesticus

characteristic: isolate

text: Faecal

text: Escherichia coli

text: Escherichia coli


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:557-17167

text: NVI

text: Norway

text: healthy

text: Gallus gallus domesticus

text: 18-2016-40-20728_S31_L007_pilon_spades_1

text: Faecal

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:557-17168

text: NVI

text: Norway

text: healthy

text: Gallus gallus domesticus

text: 19-2016-40-16449_S32_L007_pilon_spades_1

text: Faecal

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:557-17169

text: NVI

text: Norway

text: healthy

text: Gallus gallus domesticus

text: 20-2016-40-16852_S33_L007_pilon_spades_1

text: Faecal

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:557-17170

characteristic: Submitter Id

text: NVI

text: Norway

text: healthy

text: Gallus gallus domesticus

text: 21-2016-40-16989_S34_L007_pilon_spades_1

text: Faecal

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:557-17171

text: NVI

characteristic: collection date

characteristic: description

text: Norway

text: healthy

text: Gallus gallus domesticus

text: Faecal

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:557-17172

text: NVI

text: Escherichia coli isolated from broiler faecal sample, longitudinal study in norway

text: Norway

characteristic: geographic location (country and/or sea)

text: healthy

text: Gallus gallus domesticus

text: Faecal

text: Escherichia coli

text: Escherichia coli

characteristic: title


characteristic: ENA-CHECKLIST

text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:557-17173

text: NVI

text: Norway

text: healthy

text: Gallus gallus domesticus

text: 22-2016-40-18912_S35_L007_pilon_spades_1

text: Faecal

text: Escherichia coli

characteristic: organism

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:557-17174

text: APHA

text: Escherichia coli isolated from broiler faecal sample, national monitoring in uk

text: United Kingdom

text: healthy

characteristic: host health state

text: Gallus gallus domesticus

characteristic: host scientific name

text: Faecal

text: Escherichia coli

text: Escherichia coli


characteristic: ENA-FIRST-PUBLIC

text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:557-17175

text: APHA

text: Escherichia coli isolated from broiler meat sample, national monitoring in uk

text: United Kingdom

text: healthy

text: Gallus gallus domesticus

characteristic: isolate

text: Meat

text: Escherichia coli

text: Escherichia coli


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:557-17176

text: APHA

text: United Kingdom

text: healthy

text: Gallus gallus domesticus

text: Meat

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:558-17177

text: APHA

text: United Kingdom

text: healthy

text: Gallus gallus domesticus

text: Meat

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:558-17178

text: APHA

text: United Kingdom

text: healthy

text: Gallus gallus domesticus

text: Meat

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:558-17179

characteristic: Submitter Id

text: APHA

text: United Kingdom

text: healthy

text: Gallus gallus domesticus

text: Meat

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:558-17180

text: APHA

characteristic: collection date

characteristic: description

text: United Kingdom

text: healthy

text: Gallus gallus domesticus

text: Meat

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:558-17181

text: APHA

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

text: Gallus gallus domesticus

text: Meat

text: Escherichia coli

text: Escherichia coli

characteristic: title


characteristic: ENA-CHECKLIST

text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:558-17182

text: APHA

text: United Kingdom

text: healthy

text: Gallus gallus domesticus

text: Meat

text: Escherichia coli

characteristic: organism

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:558-17183

text: APHA

text: United Kingdom

text: healthy

characteristic: host health state

text: Gallus gallus domesticus

characteristic: host scientific name

text: Meat

text: Escherichia coli

text: Escherichia coli


characteristic: ENA-FIRST-PUBLIC

text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:558-17184

text: APHA

text: United Kingdom

text: healthy

text: Gallus gallus domesticus

characteristic: isolate

text: Meat

text: Escherichia coli

text: Escherichia coli


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:558-17185

text: APHA

text: United Kingdom

text: healthy

text: Gallus gallus domesticus

text: Meat

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:558-17186

text: APHA

text: United Kingdom

text: healthy

text: Gallus gallus domesticus

text: Meat

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:558-17187

text: APHA

text: United Kingdom

text: healthy

text: Gallus gallus domesticus

text: Meat

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:558-17188

characteristic: Submitter Id

text: APHA

text: United Kingdom

text: healthy

text: Gallus gallus domesticus

text: Meat

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:558-17189

text: APHA

characteristic: collection date

characteristic: description

text: United Kingdom

text: healthy

text: Gallus gallus domesticus

text: Meat

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:558-17190

text: APHA

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: healthy

text: Gallus gallus domesticus

text: Meat

text: Escherichia coli

text: Escherichia coli

characteristic: title


characteristic: ENA-CHECKLIST

text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:558-17191

text: APHA

text: United Kingdom

text: healthy

text: Gallus gallus domesticus

text: Meat

text: Escherichia coli

characteristic: organism

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:559-17192

text: APHA

text: Escherichia coli isolated from broiler faecal sample, national monitoring in uk

text: United Kingdom

text: healthy

characteristic: host health state

text: Gallus gallus domesticus

characteristic: host scientific name

text: Faecal

text: Escherichia coli

text: Escherichia coli


characteristic: ENA-FIRST-PUBLIC

text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:559-17193

text: APHA

text: United Kingdom

text: healthy

text: Gallus gallus domesticus

characteristic: isolate

text: Faecal

text: Escherichia coli

text: Escherichia coli


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NORWEGIAN VETERINARY INSTITUTE

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:559-17194

text: APHA

text: United Kingdom

text: healthy

text: Gallus gallus domesticus

text: Faecal

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:559-17195

text: APHA

text: United Kingdom

text: healthy

text: Gallus gallus domesticus

text: Faecal

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:559-17196

text: APHA

text: United Kingdom

text: healthy

text: Gallus gallus domesticus

text: Faecal

text: Escherichia coli

text: Escherichia coli


text: NORWEGIAN VETERINARY INSTITUTE

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-11-07-2023-13:28:50:559-17197

characteristic: Submitter Id

text: NVI

text: Escherichia coli isolated from broiler faecal sample, longitudinal study in norway

text: Norway

text: healthy

text: Gallus gallus domesticus

text: 23-2016-40-18654_S36_L007_pilon_spades_1

text: Faecal

text: Escherichia coli

text: Escherichia coli