text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: depth

text: ciliate culture

text: USA

text: RHODE ISLAND | NARRAGANSETT | UNIVERSITY OF RHODE ISLAND

characteristic: geographic location (region and locality)

text: stratified brackish river anoxic sediment

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

text: uncultured Cohaesibacter sp.

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: uncultured Cohaesibacter sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: d564c02b-5aa1-4602-ad1d-a8f35e937b76-asg-MAGScoT_cleanbin_000035


status: PUBLIC

text: Yes

tag: attribute

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

tag: Namespace:Tree of Life Programme

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collection date

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

characteristic: contamination score

text: NARRIV strain in culture collection of Roxanne Beinart, GSO, URI, RI, USA

unit: m

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Cohaesibacter sp.

characteristic: organism

text: WHOLE ORGANISM

text: USA | RHODE ISLAND | NARRAGANSETT | NARROW RIVER

text: ASG

characteristic: project name

text: multicore sampler

text: uncultured Cohaesibacter sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: GTDB-TK (version 2.1.1); GTDB (release 207_v2)

text: taxonomic classification defined by topology and ANI

text: c032ae39-5390-4e1b-842e-f03c3f1e3453-asg-MAGScoT_cleanbin_000035


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: depth

text: ciliate culture

text: USA

characteristic: geographic location (region and locality)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

text: Breoghania sp.

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: Breoghania sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 71611f00-021d-420e-b461-9b900bc6f268-asg-MAGScoT_cleanbin_000015


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Breoghania sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: multicore sampler

text: Breoghania sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 7d0a1624-5202-40d6-9688-2823f80c37cb-asg-MAGScoT_cleanbin_000015


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: depth

text: ciliate culture

text: USA

characteristic: geographic location (region and locality)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

text: Alteraurantiacibacter sp.

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: Alteraurantiacibacter sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 32bc8eaa-55c5-41b8-8ee5-2e043fc9d1c3-asg-MAGScoT_cleanbin_000032


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Alteraurantiacibacter sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: multicore sampler

text: Alteraurantiacibacter sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 274f13c1-d832-4ac9-9ac6-115f6d0946e1-asg-MAGScoT_cleanbin_000032


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: depth

text: ciliate culture

text: USA

characteristic: geographic location (region and locality)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

text: Burkholderiaceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: Burkholderiaceae bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: 267b943c-b467-4a56-b9bd-a6527c7bc114-asg-MAGScoT_cleanbin_000001


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Burkholderiaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: multicore sampler

text: Burkholderiaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: 096ca565-476a-4047-8246-7654da9dbd93-asg-MAGScoT_cleanbin_000001


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: depth

text: ciliate culture

text: USA

text: RHODE ISLAND | NARRAGANSETT | UNIVERSITY OF RHODE ISLAND

characteristic: geographic location (region and locality)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

text: uncultured Psychromonas sp.

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: uncultured Psychromonas sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: c1234a17-f0d5-48a3-82fd-b723500e33cc-asg-MAGScoT_cleanbin_000066


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stratified brackish river anoxic sediment

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Psychromonas sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: multicore sampler

text: uncultured Psychromonas sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 93aa034a-9ae0-447b-8f0f-8df4b297a3af-asg-MAGScoT_cleanbin_000066


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: depth

text: ciliate culture

text: USA

characteristic: geographic location (region and locality)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

text: Shewanella algae

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: Shewanella algae

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 37c53fad-faf7-4a42-9607-f49021732da3-asg-MAGScoT_cleanbin_000027


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collection date

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

characteristic: contamination score

text: NARRIV strain in culture collection of Roxanne Beinart, GSO, URI, RI, USA

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Shewanella algae

characteristic: organism

text: WHOLE ORGANISM

text: USA | RHODE ISLAND | NARRAGANSETT | NARROW RIVER

text: ASG

characteristic: project name

text: multicore sampler

text: Shewanella algae

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 750c031a-8c29-4439-8648-302ac760c3b8-asg-MAGScoT_cleanbin_000027


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: depth

text: ciliate culture

text: USA

characteristic: geographic location (region and locality)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

text: uncultured Vibrio sp.

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: uncultured Vibrio sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: GTDB-TK (version 2.1.1); GTDB (release 207_v2)

text: taxonomic classification defined by topology and ANI

text: 0e8d32df-dab6-4358-98f0-2cc30c46352c-asg-MAGScoT_cleanbin_000009


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Vibrio sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: multicore sampler

text: uncultured Vibrio sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: aa51e2d1-4d92-4de4-8cf9-b35610095439-asg-MAGScoT_cleanbin_000009


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: depth

text: ciliate culture

text: USA

characteristic: geographic location (region and locality)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

text: uncultured Marinobacterium sp.

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: uncultured Marinobacterium sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: f0ec3df2-3e01-4fcc-958c-0c59208e6397-asg-MAGScoT_cleanbin_000006


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Marinobacterium sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: multicore sampler

text: uncultured Marinobacterium sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 897961de-4244-4dd8-8123-a1d89d770465-asg-MAGScoT_cleanbin_000006


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: depth

text: ciliate culture

text: USA

text: RHODE ISLAND | NARRAGANSETT | UNIVERSITY OF RHODE ISLAND

characteristic: geographic location (region and locality)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

text: bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: 83b2c7e3-0d1f-4efe-b95d-f5f0116a7076-asg-MAGScoT_cleanbin_000079


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stratified brackish river anoxic sediment

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: multicore sampler

text: bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: 4e2e81e5-2baf-4fba-bb0a-67d3a6978afc-asg-MAGScoT_cleanbin_000079


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: depth

text: ciliate culture

text: USA

characteristic: geographic location (region and locality)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

text: Spirochaetia bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: Spirochaetia bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 4bf324a6-58ab-4c1a-91a6-5b944936e4f6-asg-MAGScoT_cleanbin_000071


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Spirochaetia bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: multicore sampler

text: Spirochaetia bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: ac2260dc-ca3a-4afb-b35d-cd879029f8d3-asg-MAGScoT_cleanbin_000071


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

text: NARRIV strain in culture collection of Roxanne Beinart, GSO, URI, RI, USA

characteristic: depth

text: ciliate culture

text: USA

characteristic: geographic location (region and locality)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

text: Sphaerochaetaceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: Sphaerochaetaceae bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 7bf679c4-1cbb-4f65-909e-5760fa701a8d-asg-MAGScoT_cleanbin_000091


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Sphaerochaetaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: USA | RHODE ISLAND | NARRAGANSETT | NARROW RIVER

text: ASG

characteristic: project name

text: multicore sampler

text: Sphaerochaetaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: GTDB-TK (version 2.1.1); GTDB (release 207_v2)

text: 74627d56-7a44-410b-bedc-b993103e5bf8-asg-MAGScoT_cleanbin_000091


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: depth

text: ciliate culture

text: USA

characteristic: geographic location (region and locality)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

text: Aminobacteriaceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: Aminobacteriaceae bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: 382782e3-cef1-4c5d-8929-310303069296-asg-MAGScoT_cleanbin_000056


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Aminobacteriaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: multicore sampler

text: Aminobacteriaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: e11c3ec7-2d95-46a0-901f-ed9076f64759-asg-MAGScoT_cleanbin_000056


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: depth

text: ciliate culture

text: USA

characteristic: geographic location (region and locality)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

text: bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic classification defined by topology and ANI

text: 768759e8-29eb-4a6a-910d-190fe119fbcb-asg-MAGScoT_cleanbin_000023


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: RHODE ISLAND | NARRAGANSETT | UNIVERSITY OF RHODE ISLAND

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: multicore sampler

text: bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 5229489c-6407-41eb-bade-b67ea2c03c69-asg-MAGScoT_cleanbin_000023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Hopital du Valais, Institut Central des Hopitaux, Sion, Switzerland

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Valais Hospital, Central Institute; Sion, Switzerland

characteristic: collecting institution

text: Alexis Dumoulin, Lorenzo Cerutti, Cedric Howald, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

characteristic: collector name

text: Switzerland

text: VS

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VS-ICH-2230942127/2023

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance not initiated by an outbreak

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Hopital du Valais, Institut Central des Hopitaux, Sion, Switzerland

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VS

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230927804/2023

characteristic: organism


text: HUG

characteristic: INSDC last update

text: public

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characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Laboratoire de virologie, Geneva, Switzerland

characteristic: collecting institution

text: Samuel Cordey, Aline Mamin, Francisco Perez, Ana Rita Goncalves, Laurent Kaiser, Lorenzo Cerutti, Cedric Howald, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

characteristic: collector name

text: Switzerland

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42660275/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: SIB

text: Switzerland

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text: Human

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characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

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text: hCoV-19/Switzerland/VS-ICH-2230933705/2023

characteristic: isolate

characteristic: sample capture status

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VS

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230945101/2023

characteristic: organism


characteristic: ENA-CHECKLIST

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text: HUG

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

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characteristic: collector name

text: Switzerland

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42632283/2023


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Switzerland

text: VS

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

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characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VS-ICH-2230957084/2023

characteristic: isolate

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characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

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text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VS

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230922213/2023

characteristic: organism


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

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characteristic: Submitter Id

text: SIB

characteristic: broker name

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characteristic: collector name

text: Switzerland

text: VS

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230926303/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HUG

text: public

text: SIB

text: Switzerland

text: GE

text: Human

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characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

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text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-42600611/2023

characteristic: isolate

characteristic: sample capture status

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HUG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42690542/2023

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HUG

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42678867/2023


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Valais Hospital, Central Institute; Sion, Switzerland

text: Alexis Dumoulin, Lorenzo Cerutti, Cedric Howald, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

text: Switzerland

text: VS

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VS-ICH-2230920095/2023

characteristic: isolate

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HUG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-SNRCI-HUG-42706849/2023

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: other


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HUG

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Laboratoire de virologie, Geneva, Switzerland

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42678951/2023

text: active surveillance not initiated by an outbreak


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HUG

text: public

text: SIB

text: Samuel Cordey, Aline Mamin, Francisco Perez, Ana Rita Goncalves, Laurent Kaiser, Lorenzo Cerutti, Cedric Howald, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

text: Switzerland

text: GE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-42684434/2023

characteristic: isolate

characteristic: sample capture status

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HUG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: NE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/NE-SNRCI-HUG-42623798/2023

characteristic: organism

text: other


characteristic: ENA-CHECKLIST

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text: HUG

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42700420/2023


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HUG

text: public

text: SIB

text: Switzerland

text: ZH

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/ZH-SNRCI-HUG-42591192/2023

characteristic: isolate

text: other

characteristic: sample capture status

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characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Hopital du Valais, Institut Central des Hopitaux, Sion, Switzerland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VS

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230929433/2023

characteristic: organism


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HUG

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

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characteristic: collector name

text: Switzerland

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42624171/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HUG

text: public

text: SIB

text: Switzerland

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characteristic: host health state

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characteristic: host scientific name

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characteristic: host sex

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text: hCoV-19/Switzerland/GE-HUG-42706783/2023

characteristic: isolate

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HUG

characteristic: INSDC center name

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characteristic: INSDC last update

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characteristic: collection date

text: Switzerland

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text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42661588/2023

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Valais Hospital, Central Institute; Sion, Switzerland

characteristic: collecting institution

text: Alexis Dumoulin, Lorenzo Cerutti, Cedric Howald, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

characteristic: collector name

text: Switzerland

text: VS

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

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text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230930855/2023


characteristic: ENA-LAST-UPDATE

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text: SIB

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characteristic: organism


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characteristic: ENA-CHECKLIST

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text: public

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text: Laboratoire de virologie, Geneva, Switzerland

text: Samuel Cordey, Aline Mamin, Francisco Perez, Ana Rita Goncalves, Laurent Kaiser, Lorenzo Cerutti, Cedric Howald, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

text: Switzerland

text: BE

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characteristic: ENA-LAST-UPDATE

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text: restricted access

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characteristic: organism


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characteristic: geographic location (region and locality)

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characteristic: ENA-CHECKLIST

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text: Switzerland

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characteristic: organism


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text: SIB

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characteristic: ENA-LAST-UPDATE

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characteristic: host health state

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characteristic: organism

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text: hCoV-19/Switzerland/VS-ICH-2230922993/2023


characteristic: ENA-CHECKLIST

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characteristic: host health state

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characteristic: organism


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