characteristic: External Id

text: SEEC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: Untreated wastewater was collected in Karlstad at Sjostadsverket on 2023-05-29 over 24 hours using a flow compensated sampler

text: Sweden

text: virus

text: Sjostadsverket

text: wastewater metagenome

text: wastewater metagenome

text: wastewater treatment plant (municipal)

characteristic: surveillance target

text: 2023-W22 Karlstad Amplified SARS-CoV-2 RNA from wastewater


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SEEC

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Untreated wastewater was collected in Lulea at Uddebo reningsverk on 2023-05-29 over 24 hours using a flow compensated sampler

characteristic: description

text: Sweden

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: virus

characteristic: investigation type

text: Uddebo reningsverk

characteristic: name of the sampling site

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome

text: wastewater treatment plant (municipal)

characteristic: sewage type

text: Severe acute respiratory syndrome coronavirus 2|NCBITaxon:2697049|http://purl.obolibrary.org/obo/NCBITaxon_2697049

text: 2023-W22 Lulea Amplified SARS-CoV-2 RNA from wastewater

characteristic: title


characteristic: External Id

text: SEEC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: Untreated wastewater was collected in Vasteras at Reningsverket Kungsangen on 2023-06-05 over 24 hours using a flow compensated sampler

text: Sweden

text: virus

text: Reningsverket Kungsangen

text: wastewater metagenome

text: wastewater metagenome

text: wastewater treatment plant (municipal)

characteristic: surveillance target

text: 2023-W23 Vasteras Amplified SARS-CoV-2 RNA from wastewater


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SEEC

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Untreated wastewater was collected in Uppsala at Kungsangsverket over 1 week leading up to 2023-06-05. Daily samples were collected over 24 hours using a flow compensated sampler then combined flow-proportionally into a composite weekly sample.

text: Sweden

text: virus

text: Kungsangsverket

text: wastewater metagenome

text: wastewater metagenome

text: wastewater treatment plant (municipal)

text: 2023-W23 Uppsala Amplified SARS-CoV-2 RNA from wastewater


text: SEEC

text: public

characteristic: Submitter Id

characteristic: collection date

text: Untreated wastewater was collected in Gavle at Duvbackens reningsverk on 2023-06-05 over 24 hours using a flow compensated sampler

characteristic: description

text: Sweden

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: virus

text: Duvbackens reningsverk

text: wastewater metagenome

text: wastewater metagenome

text: wastewater treatment plant (municipal)

text: 2023-W23 Gavle Amplified SARS-CoV-2 RNA from wastewater


text: SEEC

text: public

text: Untreated wastewater was collected in Stockholm-Kappala at Kappalaverket on 2023-06-05 over 24 hours using a flow compensated sampler

text: Sweden

characteristic: geographic location (longitude)

text: virus

characteristic: investigation type

text: Kappalaverket

characteristic: name of the sampling site

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome

text: wastewater treatment plant (municipal)

characteristic: sewage type

text: 2023-W23 Stockholm-Kappala Amplified SARS-CoV-2 RNA from wastewater


characteristic: External Id

text: SEEC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: Untreated wastewater was collected in Malmo at Sjolunda reningsverk on 2023-06-05 over 24 hours using a flow compensated sampler

text: Sweden

text: virus

text: Sjolunda reningsverk

text: wastewater metagenome

text: wastewater metagenome

text: wastewater treatment plant (municipal)

text: 2023-W23 Malmo Amplified SARS-CoV-2 RNA from wastewater

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SEEC

characteristic: INSDC last update

text: public

text: Untreated wastewater was collected in Umea at Ons reningsverk on 2023-06-05 over 24 hours using a flow compensated sampler

text: Sweden

text: virus

text: Ons reningsverk

text: wastewater metagenome

text: wastewater metagenome

text: wastewater treatment plant (municipal)

characteristic: surveillance target

text: 2023-W23 Umea Amplified SARS-CoV-2 RNA from wastewater


text: SEEC

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Untreated wastewater was collected in Kalmar at Kalmarsundsverket on 2023-06-05 over 24 hours using a flow compensated sampler

characteristic: description

text: Sweden

characteristic: geographic location (country and/or sea)

text: virus

text: Kalmarsundsverket

text: wastewater metagenome

text: wastewater metagenome

text: wastewater treatment plant (municipal)

text: 2023-W23 Kalmar Amplified SARS-CoV-2 RNA from wastewater


text: SEEC

text: public

text: Untreated wastewater was collected in Helsingborg at Oresundsverket on 2023-06-05 over 24 hours using a flow compensated sampler

text: Sweden

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: virus

characteristic: investigation type

text: Oresundsverket

characteristic: name of the sampling site

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome

text: wastewater treatment plant (municipal)

text: 2023-W23 Helsingborg Amplified SARS-CoV-2 RNA from wastewater


characteristic: External Id

text: SEEC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: Untreated wastewater was collected in Goteborg at Ryaverket on 2023-06-05 over 24 hours using a flow compensated sampler

text: Sweden

text: virus

text: Ryaverket

text: wastewater metagenome

text: wastewater metagenome

text: wastewater treatment plant (municipal)

characteristic: sewage type

text: Severe acute respiratory syndrome coronavirus 2|NCBITaxon:2697049|http://purl.obolibrary.org/obo/NCBITaxon_2697049

text: 2023-W23 Goteborg Amplified SARS-CoV-2 RNA from wastewater


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SEEC

characteristic: INSDC last update

text: public

text: Untreated wastewater was collected in Linkoping at Nykvarnsverket on 2023-06-05 over 24 hours using a flow compensated sampler

text: Sweden

text: virus

text: Nykvarnsverket

text: wastewater metagenome

text: wastewater metagenome

text: wastewater treatment plant (municipal)

text: 2023-W23 Linkoping Amplified SARS-CoV-2 RNA from wastewater

characteristic: title


text: SEEC

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Untreated wastewater was collected in Karlstad at Sjostadsverket on 2023-06-05 over 24 hours using a flow compensated sampler

characteristic: description

text: Sweden

text: virus

text: Sjostadsverket

text: wastewater metagenome

text: wastewater metagenome

text: wastewater treatment plant (municipal)

characteristic: surveillance target

text: 2023-W23 Karlstad Amplified SARS-CoV-2 RNA from wastewater


text: PHAS

text: public

text: PHAS

characteristic: broker name

text: Clinical isolate

text: Sweden

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: Human

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis


characteristic: External Id

text: Helmholtz Center Munich

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

tag: Namespace:Helmholtz Center Munich

text: laboratory

characteristic: broad-scale environmental context

text: not collected

text: Artificial mock community with staggered composition, 10^2 cells

text: laboratory

characteristic: environmental medium

text: Germany

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: laboratory

characteristic: local environmental context

text: synthetic metagenome

characteristic: organism

text: MicrobIEM decontamination benchmarking

characteristic: project name

text: synthetic metagenome

text: 097-KitA-1-1-2_S97_L001, 10^2 cells


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Helmholtz Center Munich

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: laboratory

text: not collected

characteristic: collection date

text: Artificial mock community with staggered composition, 10^3 cells

characteristic: description

text: laboratory

text: Germany

text: not collected

text: not collected

text: laboratory

text: synthetic metagenome

text: MicrobIEM decontamination benchmarking

text: synthetic metagenome

text: 098-KitA-1-1-3_S98_L001, 10^3 cells

characteristic: title


characteristic: External Id

text: Helmholtz Center Munich

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: laboratory

text: not collected

text: Artificial mock community with staggered composition, 10^4 cells

text: laboratory

text: Germany

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: laboratory

text: synthetic metagenome

text: MicrobIEM decontamination benchmarking

text: synthetic metagenome

text: 099-KitA-1-1-4_S99_L001, 10^4 cells


text: Helmholtz Center Munich

text: public

text: laboratory

characteristic: broad-scale environmental context

text: not collected

text: Artificial mock community with staggered composition, 10^5 cells

text: laboratory

characteristic: environmental medium

text: Germany

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: laboratory

characteristic: local environmental context

text: synthetic metagenome

text: MicrobIEM decontamination benchmarking

text: synthetic metagenome

text: 100-KitA-1-1-5_S100_L001, 10^5 cells


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Helmholtz Center Munich

text: public

text: laboratory

text: not collected

text: Artificial mock community with staggered composition, 10^6 cells

text: laboratory

text: Germany

text: not collected

text: not collected

text: laboratory

text: synthetic metagenome

characteristic: organism

text: MicrobIEM decontamination benchmarking

characteristic: project name

text: synthetic metagenome

text: 101-KitA-1-1-6_S101_L001, 10^6 cells


text: Helmholtz Center Munich

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: laboratory

text: not collected

characteristic: collection date

text: Artificial mock community with staggered composition, 10^7 cells

characteristic: description

text: laboratory

text: Germany

text: not collected

text: not collected

text: laboratory

text: synthetic metagenome

text: MicrobIEM decontamination benchmarking

text: synthetic metagenome

text: 102-KitA-1-1-7_S102_L001, 10^7 cells


characteristic: External Id

text: Helmholtz Center Munich

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: laboratory

text: not collected

text: Artificial mock community with staggered composition, 10^8 cells

text: laboratory

text: Germany

text: not collected

text: not collected

text: laboratory

text: synthetic metagenome

text: MicrobIEM decontamination benchmarking

text: synthetic metagenome

text: 103-KitA-1-1-8_S103_L001, 10^8 cells

characteristic: title


text: Helmholtz Center Munich

text: public

text: laboratory

characteristic: broad-scale environmental context

text: not collected

text: Artificial mock community with staggered composition, 10^9 cells

text: laboratory

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: laboratory

text: synthetic metagenome

text: MicrobIEM decontamination benchmarking

text: synthetic metagenome

text: 104-KitA-1-1-9_S104_L001, 10^9 cells


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Helmholtz Center Munich

text: public

text: laboratory

text: not collected

text: laboratory

text: Germany

text: not collected

text: not collected

text: laboratory

characteristic: local environmental context

text: synthetic metagenome

characteristic: organism

text: MicrobIEM decontamination benchmarking

text: synthetic metagenome

text: 105-KitA-1-2-2_S105_L001, 10^2 cells


text: Helmholtz Center Munich

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: laboratory

text: not collected

characteristic: collection date

text: laboratory

text: Germany

text: not collected

text: not collected

text: laboratory

text: synthetic metagenome

text: MicrobIEM decontamination benchmarking

characteristic: project name

text: synthetic metagenome

text: 106-KitA-1-2-3_S106_L001, 10^3 cells


characteristic: External Id

text: Helmholtz Center Munich

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: laboratory

text: not collected

characteristic: description

text: laboratory

text: Germany

text: not collected

text: not collected

text: laboratory

text: synthetic metagenome

text: MicrobIEM decontamination benchmarking

text: synthetic metagenome

text: 107-KitA-1-2-4_S107_L001, 10^4 cells


text: Helmholtz Center Munich

text: public

text: laboratory

characteristic: broad-scale environmental context

text: not collected

text: laboratory

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

text: laboratory

text: synthetic metagenome

text: MicrobIEM decontamination benchmarking

text: synthetic metagenome

text: 108-KitA-1-2-5_S108_L001, 10^5 cells

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Helmholtz Center Munich

text: public

text: laboratory

text: not collected

text: laboratory

text: Germany

text: not collected

text: not collected

characteristic: geographic location (longitude)

text: laboratory

characteristic: local environmental context

text: synthetic metagenome

text: MicrobIEM decontamination benchmarking

text: synthetic metagenome

text: 109-KitA-1-2-6_S109_L001, 10^6 cells


text: Helmholtz Center Munich

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: laboratory

text: not collected

characteristic: collection date

text: laboratory

text: Germany

text: not collected

text: not collected

text: laboratory

text: synthetic metagenome

characteristic: organism

text: MicrobIEM decontamination benchmarking

text: synthetic metagenome

text: 110-KitA-1-2-7_S110_L001, 10^7 cells


characteristic: External Id

text: Helmholtz Center Munich

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: laboratory

text: not collected

text: laboratory

text: Germany

text: not collected

text: not collected

text: laboratory

text: synthetic metagenome

text: MicrobIEM decontamination benchmarking

characteristic: project name

text: synthetic metagenome

text: 111-KitA-1-2-8_S111_L001, 10^8 cells


text: Helmholtz Center Munich

text: public

text: laboratory

characteristic: broad-scale environmental context

text: not collected

characteristic: description

text: laboratory

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

text: laboratory

text: synthetic metagenome

text: MicrobIEM decontamination benchmarking

text: synthetic metagenome

text: 112-KitA-1-2-9_S112_L001, 10^9 cells


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Helmholtz Center Munich

text: public

text: laboratory

text: not collected

text: laboratory

text: Germany

text: not collected

text: not collected

characteristic: geographic location (longitude)

text: laboratory

text: synthetic metagenome

text: MicrobIEM decontamination benchmarking

text: synthetic metagenome

text: 113-KitA-1-3-2_S113_L001, 10^2 cells

characteristic: title


text: Helmholtz Center Munich

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: laboratory

text: not collected

characteristic: collection date

text: laboratory

text: Germany

text: not collected

text: not collected

text: laboratory

characteristic: local environmental context

text: synthetic metagenome

text: MicrobIEM decontamination benchmarking

text: synthetic metagenome

text: 114-KitA-1-3-3_S114_L001, 10^3 cells


characteristic: External Id

text: Helmholtz Center Munich

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: laboratory

text: not collected

text: laboratory

text: Germany

text: not collected

text: not collected

text: laboratory

text: synthetic metagenome

characteristic: organism

text: MicrobIEM decontamination benchmarking

text: synthetic metagenome

text: 115-KitA-1-3-4_S115_L001, 10^4 cells


text: Helmholtz Center Munich

text: public

text: laboratory

characteristic: broad-scale environmental context

text: not collected

characteristic: description

text: laboratory

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: laboratory

text: synthetic metagenome

text: MicrobIEM decontamination benchmarking

characteristic: project name

text: synthetic metagenome

text: 116-KitA-1-3-5_S116_L001, 10^5 cells


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Helmholtz Center Munich

text: public

text: laboratory

text: not collected

text: laboratory

text: Germany

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: laboratory

text: synthetic metagenome

text: MicrobIEM decontamination benchmarking

text: synthetic metagenome

text: 117-KitA-1-3-6_S117_L001, 10^6 cells


text: Helmholtz Center Munich

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: laboratory

text: not collected

characteristic: collection date

text: laboratory

text: Germany

text: not collected

text: not collected

text: laboratory

text: synthetic metagenome

text: MicrobIEM decontamination benchmarking

text: synthetic metagenome

text: 118-KitA-1-3-7_S118_L001, 10^7 cells

characteristic: title


characteristic: External Id

text: Helmholtz Center Munich

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: laboratory

text: not collected

text: laboratory

text: Germany

text: not collected

text: not collected

text: laboratory

characteristic: local environmental context

text: synthetic metagenome

text: MicrobIEM decontamination benchmarking

text: synthetic metagenome

text: 119-KitA-1-3-8_S119_L001, 10^8 cells


text: Helmholtz Center Munich

text: public

text: laboratory

characteristic: broad-scale environmental context

text: not collected

characteristic: description

text: laboratory

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: laboratory

text: synthetic metagenome

characteristic: organism

text: MicrobIEM decontamination benchmarking

text: synthetic metagenome

text: 120-KitA-1-3-9_S120_L001, 10^9 cells


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Helmholtz Center Munich

text: public

text: laboratory

text: not collected

text: Full-pipeline negative control

text: laboratory

text: Germany

text: not collected

characteristic: geographic location (latitude)

text: not collected

text: laboratory

text: synthetic metagenome

text: MicrobIEM decontamination benchmarking

characteristic: project name

text: synthetic metagenome


text: Helmholtz Center Munich

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: laboratory

text: not collected

characteristic: collection date

text: Negative control added before first PCR

text: laboratory

text: Germany

text: not collected

text: not collected

characteristic: geographic location (longitude)

text: laboratory

text: synthetic metagenome

text: MicrobIEM decontamination benchmarking

text: synthetic metagenome


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

tag: Namespace:Respiratory Virus Unit, Microbiology Services Colindale, Public Health England

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: receipt date

text: active surveillance in response to outbreak

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

characteristic: title

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Respiratory Virus Unit, Microbiology Services Colindale, Public Health England

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: collection date

text: not provided

text: not provided

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

text: not provided

text: not provided


text: public

tag: Namespace:UCD School of Agriculture and Food Science, University College Dublin, Belfield, Dublin, Ireland.

text: ArrayExpress

characteristic: broker name

text: not collected

text: cattle

characteristic: common name

text: Protocols: Peripheral blood was collected from herds containing naturally M. bovis-infected and from non-infected herds. Genomic DNA was subsequently extracted from frozen whole blood representing 16 Friesian cows using QIAamp Blood Mini Kit (Cat. No. 51104, Qiagen). The EZ DNA Methylation Gold Kit (Cat No. D5005) Zymo Research was used to perform the bisulfite treatment of the unmethylated cytosines present in extracted DNA samples.

characteristic: description

text: not collected

characteristic: infect

text: not applicable

characteristic: isolate

text: Bos taurus

text: Bos taurus

text: blood

characteristic: organism part

text: Bos taurus

text: Skin test -ve & IFN-gamma -ve

characteristic: test status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCD School of Agriculture and Food Science, University College Dublin, Belfield, Dublin, Ireland.

text: public

text: ArrayExpress

text: not collected

text: cattle

text: not collected

text: not applicable

text: Bos taurus

text: Bos taurus

text: blood

text: Bos taurus

text: Skin test -ve & IFN-gamma -ve

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: not collected

text: cattle

text: not collected

text: not applicable

text: Bos taurus

text: Bos taurus

text: blood

text: Bos taurus

text: Skin test -ve & IFN-gamma +ve


text: public

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: cattle

text: not collected

characteristic: geographic location (country and/or sea)

text: Tuberculosis, Bovine

text: not applicable

text: Bos taurus

characteristic: organism

text: Bos taurus

text: blood

text: Bos taurus

text: Skin test +ve & IFN-gamma +ve


text: public

text: ArrayExpress

text: not collected

text: cattle

characteristic: common name

characteristic: description

text: not collected

text: Tuberculosis, Bovine

characteristic: infect

text: not applicable

characteristic: isolate

text: Bos taurus

text: Bos taurus

text: blood

characteristic: organism part

text: Bos taurus

text: Skin test +ve & IFN-gamma -ve


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

tag: Namespace:The Roslin Institute (University of Edinburgh)

text: Canis lupus familiaris

characteristic: broad-scale environmental context

text: metagenome

text: Fecal sample originating from dog id FS16 receiving treatment: After_diet_change

text: dog id FS16

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Feces

characteristic: host body site

text: treatment: After_diet_change

characteristic: local environmental context

text: metagenome

characteristic: project name

text: metagenome


text: The Roslin Institute (University of Edinburgh)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Canis lupus familiaris

characteristic: collection date

text: metagenome

text: Fecal sample originating from dog id FS18 receiving treatment: After_diet_change

text: dog id FS18

text: United Kingdom

characteristic: geographic location (country and/or sea)

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characteristic: ENA-LAST-UPDATE

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characteristic: ENA-LAST-UPDATE

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characteristic: ENA-CHECKLIST

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characteristic: INSDC center name

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characteristic: ENA-LAST-UPDATE

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characteristic: ENA-CHECKLIST

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characteristic: INSDC center name

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characteristic: ENA-LAST-UPDATE

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characteristic: ENA-CHECKLIST

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characteristic: INSDC center name

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characteristic: ENA-LAST-UPDATE

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tag: Namespace:JOHANNES GUTENBERG UNIVERSITY MAINZ

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characteristic: ArrayExpress-Species

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characteristic: ENA-CHECKLIST

text: SEEC

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text: Untreated wastewater was collected in Uppsala at Kungsangsverket over 1 week leading up to 2023-06-12. Daily samples were collected over 24 hours using a flow compensated sampler then combined flow-proportionally into a composite weekly sample.

text: Sweden

characteristic: geographic location (country and/or sea)

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text: Severe acute respiratory syndrome coronavirus 2|NCBITaxon:2697049|http://purl.obolibrary.org/obo/NCBITaxon_2697049

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characteristic: ENA-CHECKLIST

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characteristic: SRA accession

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text: Untreated wastewater was collected in Stockholm-Kappala at Kappalaverket on 2023-06-12 over 24 hours using a flow compensated sampler

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characteristic: ENA-FIRST-PUBLIC

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characteristic: organism

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characteristic: ENA-CHECKLIST

text: SEEC

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characteristic: geographic location (latitude)

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text: SEEC

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characteristic: Submitter Id

characteristic: collection date

text: Untreated wastewater was collected in Helsingborg at Oresundsverket on 2023-06-12 over 24 hours using a flow compensated sampler

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (longitude)

text: virus

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characteristic: ENA-FIRST-PUBLIC

text: SEEC

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text: SEEC

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characteristic: collection date

text: Untreated wastewater was collected in Goteborg at Ryaverket on 2023-06-12 over 24 hours using a flow compensated sampler

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characteristic: geographic location (longitude)

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characteristic: ENA-FIRST-PUBLIC

text: SEEC

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characteristic: External Id

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text: Untreated wastewater was collected in Linkoping at Nykvarnsverket on 2023-06-12 over 24 hours using a flow compensated sampler

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text: Untreated wastewater was collected in Lulea at Uddebo reningsverk on 2023-06-12 over 24 hours using a flow compensated sampler

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characteristic: ENA-LAST-UPDATE

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text: Untreated wastewater was collected in Helsingborg at Oresundsverket on 2023-06-19 over 24 hours using a flow compensated sampler

characteristic: description

text: Sweden

characteristic: geographic location (country and/or sea)

text: virus

text: Oresundsverket

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text: 2023-W25 Helsingborg Amplified SARS-CoV-2 RNA from wastewater


characteristic: ENA-FIRST-PUBLIC

text: SEEC

text: public

text: Untreated wastewater was collected in Jonkoping at Simsholmens avloppsreningsverk on 2023-06-19 over 24 hours using a flow compensated sampler

text: Sweden

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: virus

characteristic: investigation type

text: Simsholmens avloppsreningsverk

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characteristic: title


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text: Untreated wastewater was collected in Vasteras at Reningsverket Kungsangen on 2023-06-19 over 24 hours using a flow compensated sampler

text: Sweden

text: virus

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characteristic: ENA-CHECKLIST

text: SEEC

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text: Untreated wastewater was collected in Ostersund at Alunda avloppsreningsverk on 2023-06-19 over 24 hours using a flow compensated sampler

text: Sweden

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characteristic: organism

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text: 2023-W25 Ostersund Amplified SARS-CoV-2 RNA from wastewater


text: SEEC

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characteristic: Submitter Id

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text: Untreated wastewater was collected in Goteborg at Ryaverket on 2023-06-19 over 24 hours using a flow compensated sampler

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text: virus

text: Ryaverket

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text: Severe acute respiratory syndrome coronavirus 2|NCBITaxon:2697049|http://purl.obolibrary.org/obo/NCBITaxon_2697049

text: 2023-W25 Goteborg Amplified SARS-CoV-2 RNA from wastewater


characteristic: ENA-FIRST-PUBLIC

text: SEEC

text: public

text: Untreated wastewater was collected in Stockholm-Grodinge at Himmerfjardsverket on 2023-06-19 over 24 hours using a flow compensated sampler

text: Sweden

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: virus

characteristic: investigation type

text: Himmerfjardsverket

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text: 2023-W25 Stockholm-Grodinge Amplified SARS-CoV-2 RNA from wastewater


characteristic: ENA-LAST-UPDATE

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text: Untreated wastewater was collected in Linkoping at Nykvarnsverket on 2023-06-19 over 24 hours using a flow compensated sampler

text: Sweden

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characteristic: ENA-CHECKLIST

text: SEEC

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text: Untreated wastewater was collected in Karlstad at Sjostadsverket on 2023-06-19 over 24 hours using a flow compensated sampler

text: Sweden

text: virus

text: Sjostadsverket

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text: wastewater metagenome

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text: 2023-W25 Karlstad Amplified SARS-CoV-2 RNA from wastewater


text: SEEC

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characteristic: Submitter Id

characteristic: collection date

text: Untreated wastewater was collected in Lulea at Uddebo reningsverk on 2023-06-19 over 24 hours using a flow compensated sampler

characteristic: description

text: Sweden

characteristic: geographic location (country and/or sea)

text: virus

text: Uddebo reningsverk

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text: wastewater metagenome

text: wastewater treatment plant (municipal)

text: 2023-W25 Lulea Amplified SARS-CoV-2 RNA from wastewater


characteristic: ENA-FIRST-PUBLIC

text: SEEC

text: public

text: Untreated wastewater was collected in Stockholm-Bromma at Bromma reningsverk on 2023-06-19 over 24 hours using a flow compensated sampler

text: Sweden

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: virus

characteristic: investigation type

text: Bromma reningsverk

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text: 2023-W25 Stockholm-Bromma Amplified SARS-CoV-2 RNA from wastewater


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SEEC

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text: Untreated wastewater was collected in Uppsala at Kungsangsverket over 1 week leading up to 2023-06-26. Daily samples were collected over 24 hours using a flow compensated sampler then combined flow-proportionally into a composite weekly sample.

text: Sweden

text: virus

text: Kungsangsverket

text: wastewater metagenome

text: wastewater metagenome

text: wastewater treatment plant (municipal)

characteristic: surveillance target

text: 2023-W26 Uppsala Amplified SARS-CoV-2 RNA from wastewater


characteristic: ENA-CHECKLIST

text: SEEC

characteristic: INSDC center name

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text: public

characteristic: SRA accession

text: Untreated wastewater was collected in Gavle at Duvbackens reningsverk on 2023-06-26 over 24 hours using a flow compensated sampler

text: Sweden

text: virus

text: Duvbackens reningsverk

text: wastewater metagenome

text: wastewater metagenome

text: wastewater treatment plant (municipal)

text: 2023-W26 Gavle Amplified SARS-CoV-2 RNA from wastewater

characteristic: title


text: SEEC

text: public

characteristic: Submitter Id

characteristic: collection date

text: Untreated wastewater was collected in Stockholm-Kappala at Kappalaverket on 2023-06-26 over 24 hours using a flow compensated sampler

characteristic: description

text: Sweden

characteristic: geographic location (country and/or sea)

text: virus

text: Kappalaverket

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text: wastewater metagenome

text: wastewater metagenome

text: wastewater treatment plant (municipal)

text: 2023-W26 Stockholm-Kappala Amplified SARS-CoV-2 RNA from wastewater


characteristic: ENA-FIRST-PUBLIC

text: SEEC

text: public

text: Untreated wastewater was collected in Malmo at Sjolunda reningsverk on 2023-06-26 over 24 hours using a flow compensated sampler

text: Sweden

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: virus

characteristic: investigation type

text: Sjolunda reningsverk

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome

text: wastewater treatment plant (municipal)

text: Severe acute respiratory syndrome coronavirus 2|NCBITaxon:2697049|http://purl.obolibrary.org/obo/NCBITaxon_2697049

text: 2023-W26 Malmo Amplified SARS-CoV-2 RNA from wastewater


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SEEC

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text: public

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text: Untreated wastewater was collected in Orebro at Skebacks reningsverk on 2023-06-26 over 24 hours using a flow compensated sampler

text: Sweden

text: virus

text: Skebacks reningsverk

text: wastewater metagenome

text: wastewater metagenome

text: wastewater treatment plant (municipal)

characteristic: sewage type

text: 2023-W26 Orebro Amplified SARS-CoV-2 RNA from wastewater


characteristic: ENA-CHECKLIST

text: SEEC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: Untreated wastewater was collected in Umea at Ons reningsverk on 2023-06-26 over 24 hours using a flow compensated sampler

text: Sweden

text: virus

text: Ons reningsverk

text: wastewater metagenome

text: wastewater metagenome

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characteristic: surveillance target

text: 2023-W26 Umea Amplified SARS-CoV-2 RNA from wastewater


text: SEEC

text: public

characteristic: Submitter Id

characteristic: collection date

text: Untreated wastewater was collected in Kalmar at Kalmarsundsverket on 2023-06-26 over 24 hours using a flow compensated sampler

characteristic: description

text: Sweden

characteristic: geographic location (country and/or sea)

text: virus

text: Kalmarsundsverket

text: wastewater metagenome

text: wastewater metagenome

text: wastewater treatment plant (municipal)

text: 2023-W26 Kalmar Amplified SARS-CoV-2 RNA from wastewater

characteristic: title


characteristic: ENA-FIRST-PUBLIC

text: SEEC

text: public

text: Untreated wastewater was collected in Helsingborg at Oresundsverket on 2023-06-26 over 24 hours using a flow compensated sampler

text: Sweden

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: virus

characteristic: investigation type

text: Oresundsverket

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text: wastewater metagenome

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text: 2023-W26 Helsingborg Amplified SARS-CoV-2 RNA from wastewater


characteristic: ENA-LAST-UPDATE

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text: SEEC

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text: virus

text: Simsholmens avloppsreningsverk

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characteristic: ENA-CHECKLIST

text: SEEC

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text: public

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text: Sweden

text: virus

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text: wastewater metagenome

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text: 2023-W26 Vasteras Amplified SARS-CoV-2 RNA from wastewater


text: SEEC

text: public

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text: Untreated wastewater was collected in Ostersund at Alunda avloppsreningsverk on 2023-06-26 over 24 hours using a flow compensated sampler

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text: Sweden

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text: virus

text: Govikens reningsverk

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text: 2023-W26 Ostersund Amplified SARS-CoV-2 RNA from wastewater


characteristic: ENA-FIRST-PUBLIC

text: SEEC

text: public

text: Untreated wastewater was collected in Goteborg at Ryaverket on 2023-06-26 over 24 hours using a flow compensated sampler

text: Sweden

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: virus

characteristic: investigation type

text: Ryaverket

text: wastewater metagenome

text: wastewater metagenome

text: wastewater treatment plant (municipal)

text: 2023-W26 Goteborg Amplified SARS-CoV-2 RNA from wastewater

characteristic: title


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text: SEEC

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text: wastewater metagenome

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text: Severe acute respiratory syndrome coronavirus 2|NCBITaxon:2697049|http://purl.obolibrary.org/obo/NCBITaxon_2697049

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characteristic: ENA-CHECKLIST

text: SEEC

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text: Sweden

text: virus

text: Nykvarnsverket

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome

text: wastewater treatment plant (municipal)

text: 2023-W26 Linkoping Amplified SARS-CoV-2 RNA from wastewater


text: SEEC

text: public

characteristic: Submitter Id

characteristic: collection date

text: Untreated wastewater was collected in Karlstad at Sjostadsverket on 2023-06-26 over 24 hours using a flow compensated sampler

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text: Sweden

characteristic: geographic location (country and/or sea)

text: virus

text: Sjostadsverket

text: wastewater metagenome

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text: wastewater treatment plant (municipal)

characteristic: sewage type

text: 2023-W26 Karlstad Amplified SARS-CoV-2 RNA from wastewater