characteristic: INSDC center name

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text: Denmark

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text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-55726/2021

text: not provided

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characteristic: collecting institution

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text: Danish Covid-19 Genome Consortium

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text: Human

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characteristic: INSDC center name

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text: Danish Covid-19 Genome Consortium

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characteristic: INSDC center name

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text: public

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text: Danish Covid-19 Genome Consortium

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text: public

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text: not provided


characteristic: ENA-CHECKLIST

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text: public

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text: public

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text: Danish Covid-19 Genome Consortium

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text: Denmark

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text: not provided

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text: not provided

text: not provided


characteristic: INSDC center name

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text: public

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text: Molekylær Medicinsk Afdeling, Aarhus University Hospital, Aarhus, Denmark

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

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text: Midtjylland

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characteristic: ENA-CHECKLIST

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text: public

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

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text: Original

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text: not provided

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text: not provided

text: not provided

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text: active surveillance in response to outbreak


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text: not provided


characteristic: INSDC center name

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text: public

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text: Original

text: Denmark

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text: public

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text: not provided


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text: public

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text: public

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text: Danish Covid-19 Genome Consortium

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text: not provided


characteristic: INSDC center name

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text: public

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text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

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text: not provided


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text: public

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text: Danish Covid-19 Genome Consortium

text: Original

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text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

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text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

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text: not provided

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text: not provided


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characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

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text: not provided

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text: not provided

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text: public

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text: Danish Covid-19 Genome Consortium

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text: Original

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text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-229336/2021

text: not provided

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text: not provided

text: not provided


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

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text: Human

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characteristic: INSDC center name

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text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

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text: not provided

characteristic: host sex

text: not provided

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text: not provided

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characteristic: organism

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text: Danish Covid-19 Genome Consortium

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text: Original

characteristic: description

text: Denmark

text: Midtjylland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Midtjylland

characteristic: geographic location (region and locality)

text: Human

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text: n_infections=2,last_infection_date=2022-02-21

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text: not provided

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text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Department of Clinical Microbiology, Odense University Hospital, Odense, Denmark

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

text: Human

text: n_infections=2,last_infection_date=2021-12-06

text: not provided

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text: not provided

characteristic: host sex

text: not provided

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text: not provided

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text: public

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text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

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text: Denmark

text: Syddanmark

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Sjaelland

characteristic: geographic location (region and locality)

text: Human

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text: n_infections=3,last_infection_id=hCoV-19/Denmark/DCGC-354131/2022

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text: not provided

text: not provided


characteristic: INSDC center name

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characteristic: INSDC last update

text: public

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text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-429670/2022

text: not provided

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text: not provided

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text: not provided

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text: not provided

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text: Severe acute respiratory syndrome coronavirus 2

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text: Denmark

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text: n_infections=2,last_infection_date=2022-02-28

text: not provided

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text: not provided

text: not provided

text: not provided

text: active surveillance in response to outbreak


characteristic: INSDC center name

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characteristic: INSDC last update

text: public

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text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Sjaelland

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text: Human

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text: n_infections=2,last_infection_date=2022-01-17

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

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text: Danish Covid-19 Genome Consortium

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text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

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text: public

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text: Danish Covid-19 Genome Consortium

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text: Denmark

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text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

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text: public

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text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

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text: Syddanmark

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text: Human

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text: not provided

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characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

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text: not provided

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text: not provided

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text: Denmark

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text: n_infections=3,last_infection_date=2022-02-28

text: not provided

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text: not provided

text: not provided


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

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text: Human

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text: public

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text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

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text: not provided

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text: Denmark

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text: n_infections=2,last_infection_date=2021-12-27

text: not provided

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text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

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text: public

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text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

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text: Human

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text: public

text: Danish Covid-19 Genome Consortium

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text: Denmark

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text: not provided

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text: Danish Covid-19 Genome Consortium

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text: Denmark

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text: n_infections=2,last_infection_date=2022-01-24

text: not provided

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text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

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text: Hovedstaden

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text: Human

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characteristic: INSDC center name

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text: public

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text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

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text: Human

text: n_infections=2,last_infection_date=2022-01-10

text: not provided

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text: not provided

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text: Denmark

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text: n_infections=3,last_infection_date=2022-01-10

text: not provided

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text: not provided

text: not provided


characteristic: INSDC center name

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characteristic: INSDC last update

text: public

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text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

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text: Human

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characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

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text: n_infections=3,last_infection_date=2022-03-14

text: not provided

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text: not provided

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text: not provided

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text: public

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text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

characteristic: collecting institution

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text: Danish Covid-19 Genome Consortium

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text: Original

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text: Denmark

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text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-252832/2021

text: not provided

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text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

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text: Human

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text: n_infections=2,last_infection_date=2022-02-07

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text: not provided


characteristic: INSDC center name

characteristic: INSDC first public

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text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

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text: n_infections=2,last_infection_date=2022-02-21

text: not provided

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text: not provided

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text: not provided

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text: Severe acute respiratory syndrome coronavirus 2

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text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

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text: Denmark

text: Syddanmark

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Sjaelland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

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text: not provided

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text: not provided

text: not provided

text: not provided

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characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Molekylær Medicinsk Afdeling, Aarhus University Hospital, Aarhus, Denmark

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

text: not provided

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text: not provided

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text: Danish Covid-19 Genome Consortium

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text: Original

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text: Denmark

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text: n_infections=2,last_infection_date=2022-03-28

text: not provided

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text: not provided

text: not provided


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

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text: public

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text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

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text: not provided

text: not provided


characteristic: INSDC center name

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characteristic: INSDC last update

text: public

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text: Department of Clinical Microbiology, Odense University Hospital, Odense, Denmark

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Syddanmark

characteristic: geographic location (region and locality)

text: Human

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text: not provided


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

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text: not provided

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text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Syddanmark

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text: Human

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text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-449946/2022

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characteristic: INSDC center name

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text: public

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text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

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text: not provided

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characteristic: description

text: Denmark

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text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

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text: Human

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text: n_infections=2,last_infection_date=2021-12-27

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text: not provided

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characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

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characteristic: host sex

text: not provided

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text: not provided

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characteristic: INSDC center name

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text: public

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text: Danish Covid-19 Genome Consortium

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text: Original

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text: Denmark

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text: n_infections=3,last_infection_date=2022-02-07

text: not provided

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text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

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text: Human

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text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-443334/2022

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characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Sjaelland

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-499389/2022

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

text: Syddanmark

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (country and/or sea)

text: Nordjylland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

text: Human

text: n_infections=2,last_infection_date=2022-06-06

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

text: Sjaelland

text: Human

text: n_infections=2,last_infection_date=2022-01-24

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ifremer

text: public

text: TCGTCGGCAGCGTCAGATGTGTATAAGAGACAG GTCTCGTGGGCTCGGAGATGTGTATAAGAGACAG

characteristic: adapters

text: AOAR (Aquaculture Origin Aquaculture Raised)

characteristic: aquaculture origin

text: SeBiMER

characteristic: broker name

text: Thomas Sol Dourdin

text: Thomas Sol Dourdin

text: Pacific oyster

characteristic: common name

text: Gastrula

characteristic: environmental package

text: No

characteristic: experimental factor

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Pays de la Loire, Bouin

characteristic: geographic location (region and locality)

text: eukaryote

characteristic: investigation type

text: samples derived from larval rearing system supplied in treated (UV + 1 m + active coal seawater.

text: Not provided

characteristic: multiplex identifiers

text: Crassostrea gigas

text: Not provided

characteristic: pcr primers

text: diploid

characteristic: ploidy

text: PESTO

characteristic: project name

text: RNA extracted by Trizol-Chloroform from control gastrula embryos (6 hours post-fertilization)

text: Crassostrea gigas

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SeBiMER

text: Thomas Sol Dourdin

characteristic: collecting institution

characteristic: collection date

text: Thomas Sol Dourdin

characteristic: collector name

text: Pacific oyster

text: Gastrula

text: No

text: France

text: Pays de la Loire, Bouin

text: eukaryote

text: Not provided

text: Crassostrea gigas

characteristic: organism

text: Not provided

text: diploid

text: PESTO

text: RNA extracted by Trizol-Chloroform from gastrula embryos (6 hour post-fertilization) exposed to pesticide mixture and descending from parents already exposed during their early development

text: Crassostrea gigas

text: Sequencing by synthesis (Illumina)

characteristic: title


text: Ifremer

text: public

characteristic: adapters

characteristic: aquaculture origin

text: SeBiMER

characteristic: broker name

text: Thomas Sol Dourdin

text: Thomas Sol Dourdin

text: Pacific oyster

characteristic: common name

text: Gastrula

characteristic: environmental package

text: No

characteristic: experimental factor

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Pays de la Loire, Bouin

characteristic: geographic location (region and locality)

text: eukaryote

characteristic: investigation type

text: Not provided

characteristic: multiplex identifiers

text: Crassostrea gigas

text: Not provided

characteristic: pcr primers

text: diploid

characteristic: ploidy

text: PESTO

characteristic: project name

text: RNA extracted by Trizol-Chloroform from control gastrula embryos (6 hours post-fertilization) descending from parents exposed to a pesticide mixture in their early development

text: Crassostrea gigas

text: Sequencing by synthesis (Illumina)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SeBiMER

text: Thomas Sol Dourdin

characteristic: collecting institution

characteristic: collection date

text: Thomas Sol Dourdin

characteristic: collector name

text: Pacific oyster

text: Gastrula

text: No

text: France

text: Pays de la Loire, Bouin

text: eukaryote

text: Not provided

text: Crassostrea gigas

characteristic: organism

text: Not provided

text: diploid

text: PESTO

text: RNA extracted by Trizol-Chloroform from gastrula embryos (6 hour post-fertilization) exposed to pesticide mixture

text: Crassostrea gigas

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method


text: Ifremer

text: public

characteristic: adapters

characteristic: aquaculture origin

text: SeBiMER

characteristic: broker name

text: Thomas Sol Dourdin

text: Thomas Sol Dourdin

text: Pacific oyster

characteristic: common name

text: Metamorphosis-competent pediveliger larvae

characteristic: environmental package

text: No

characteristic: experimental factor

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Pays de la Loire, Bouin

characteristic: geographic location (region and locality)

text: eukaryote

characteristic: investigation type

text: Not provided

characteristic: multiplex identifiers

text: Crassostrea gigas

text: Not provided

characteristic: pcr primers

text: diploid

characteristic: ploidy

text: PESTO

text: RNA extracted by Trizol-Chloroform from control metamorphosis competent larvae

text: Crassostrea gigas

text: Sequencing by synthesis (Illumina)

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SeBiMER

text: Thomas Sol Dourdin

characteristic: collecting institution

characteristic: collection date

text: Thomas Sol Dourdin

characteristic: collector name

text: Pacific oyster

text: No

text: France

text: Pays de la Loire, Bouin

text: eukaryote

text: Not provided

text: Crassostrea gigas

characteristic: organism

text: Not provided

text: diploid

text: PESTO

characteristic: project name

text: RNA extracted by Trizol-Chloroform from metamorphosis competent larvae exposed to a pesticide mixture in their early development (0 hpf to 48 hpf)

text: Crassostrea gigas

text: Sequencing by synthesis (Illumina)


text: Ifremer

text: public

characteristic: adapters

characteristic: aquaculture origin

text: SeBiMER

characteristic: broker name

text: Thomas Sol Dourdin

text: Thomas Sol Dourdin

text: Pacific oyster

characteristic: common name

characteristic: environmental package

text: No

characteristic: experimental factor

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Pays de la Loire, Bouin

characteristic: geographic location (region and locality)

text: eukaryote

characteristic: investigation type

text: Not provided

characteristic: multiplex identifiers

text: Crassostrea gigas

text: Not provided

characteristic: pcr primers

text: diploid

characteristic: ploidy

text: PESTO

text: RNA extracted by Trizol-Chloroform from metamorphosis competent larvae exposed to a pesticide mixture in their early development (0 hpf to 48 hpf) and descending from exposed parents

text: Crassostrea gigas

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SeBiMER

text: Thomas Sol Dourdin

characteristic: collecting institution

characteristic: collection date

text: Thomas Sol Dourdin

characteristic: collector name

text: Pacific oyster

text: No

text: France

text: Pays de la Loire, Bouin

text: eukaryote

text: Not provided

text: Crassostrea gigas

characteristic: organism

text: Not provided

text: diploid

text: PESTO

text: RNA extracted by Trizol-Chloroform from control metamorphosis competent larvae descending from parents exposed to a pesticide mixture in their early development (0 hpf - 48 hpf)

text: Crassostrea gigas

text: Sequencing by synthesis (Illumina)

characteristic: title


text: Ifremer

text: public

characteristic: adapters

characteristic: aquaculture origin

text: SeBiMER

characteristic: broker name

text: Thomas Sol Dourdin

text: Thomas Sol Dourdin

text: Pacific oyster

characteristic: common name

characteristic: environmental package

text: No

text: Control-Control

characteristic: experimental factor

text: France

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Pays de la Loire, Bouin

characteristic: geographic location (region and locality)

text: eukaryote

characteristic: investigation type

text: Not provided

characteristic: multiplex identifiers

text: Crassostrea gigas

text: Not provided

characteristic: pcr primers

text: diploid

characteristic: ploidy

text: PESTO

characteristic: project name

text: Crassostrea gigas

text: Sequencing by synthesis (Illumina)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: FUNCTIONAL GENOMICS CENTER ZURICH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:FUNCTIONAL GENOMICS CENTER ZURICH

characteristic: Submitter Id

characteristic: collection date

text: human

characteristic: description

text: Switzerland

text: Homo sapiens

characteristic: organism

text: Homo sapiens


text: FUNCTIONAL GENOMICS CENTER ZURICH

text: public

text: human

characteristic: common name

text: HealthyControl

text: Switzerland

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: Homo sapiens

characteristic: title


text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

text: public

tag: Namespace:Tree of Life Programme

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

characteristic: collected by

text: University of Haifa

characteristic: collecting institution

unit: m

characteristic: depth

text: adult sponge tissue

characteristic: environmental medium

text: Israel

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Eilat

characteristic: geographic location (region and locality)

text: coral reef

characteristic: habitat

text: adult

characteristic: host life stage

text: Theonella swinhoei

characteristic: host scientific name

characteristic: host taxid

text: ILIA BURGSDORF | RINAT BAR SHALOM

characteristic: identified by

text: University of Haifa Israel

text: marine coral reef biome

characteristic: local environmental context

text: sponge metagenome

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: sponge metagenome

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: 9a36408d-1225-4ac7-801a-ba8702c63ea6-asg-metagenome

characteristic: tolid


text: No

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); MaxBin (version 2.7)

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

characteristic: collected by

text: University of Haifa

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult sponge tissue

text: Israel

characteristic: geographic location (country and/or sea)

text: Eilat

text: coral reef

text: adult

text: Theonella swinhoei

text: ILIA BURGSDORF | RINAT BAR SHALOM

text: University of Haifa Israel

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Theonella swinhoei

text: marine coral reef biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Acidimicrobiales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Acidimicrobiales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

text: GTDB-TK (version 2.3.2); GTDB (release 2014)

characteristic: taxonomic classification

text: taxonomic classification defined by topology and ANI

characteristic: taxonomic identity marker

text: 939488d5-6302-42cc-bb59-eee1f2fea2ae-asg-MAGScoT_cleanbin_000090

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

characteristic: collected by

text: University of Haifa

text: adult sponge tissue

characteristic: environmental medium

text: Israel

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Eilat

characteristic: geographic location (region and locality)

text: coral reef

characteristic: habitat

text: adult

characteristic: host life stage

text: Theonella swinhoei

characteristic: host scientific name

characteristic: host taxid

text: ILIA BURGSDORF | RINAT BAR SHALOM

characteristic: identified by

text: University of Haifa Israel

text: metagenome-assembled genome

text: Sponge: Theonella swinhoei

text: marine coral reef biome

characteristic: local environmental context

text: sponge metagenome

text: Acidimicrobiia bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Acidimicrobiia bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: 9701bfbc-d4e6-4c4c-b7bb-210c70fd38d3-asg-MAGScoT_cleanbin_000060


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

text: University of Haifa

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult sponge tissue

text: Israel

characteristic: geographic location (country and/or sea)

text: Eilat

text: coral reef

text: adult

text: Theonella swinhoei

text: ILIA BURGSDORF | RINAT BAR SHALOM

text: University of Haifa Israel

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Theonella swinhoei

text: marine coral reef biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Alphaproteobacteria bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Alphaproteobacteria bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic novelty determined using RED

characteristic: taxonomic identity marker

text: b0b969ea-75ac-4638-ba9b-48782de37e46-asg-MAGScoT_cleanbin_000016

characteristic: title


text: No

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

characteristic: collected by

text: University of Haifa

text: adult sponge tissue

characteristic: environmental medium

text: Israel

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Eilat

characteristic: geographic location (region and locality)

text: coral reef

characteristic: habitat

text: adult

characteristic: host life stage

text: Theonella swinhoei

characteristic: host scientific name

characteristic: host taxid

text: ILIA BURGSDORF | RINAT BAR SHALOM

characteristic: identified by

text: University of Haifa Israel

text: metagenome-assembled genome

text: Sponge: Theonella swinhoei

text: marine coral reef biome

characteristic: local environmental context

text: sponge metagenome

text: Alphaproteobacteria bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Alphaproteobacteria bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: 4b7cb4a8-9e7e-404a-a031-cbc0cd0494f5-asg-MAGScoT_cleanbin_000172


text: No

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

text: University of Haifa

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult sponge tissue

text: Israel

characteristic: geographic location (country and/or sea)

text: Eilat

text: coral reef

text: adult

text: Theonella swinhoei

text: ILIA BURGSDORF | RINAT BAR SHALOM

text: University of Haifa Israel

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Theonella swinhoei

text: marine coral reef biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Alphaproteobacteria bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Alphaproteobacteria bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: b06facd0-03d3-49a9-9ac1-73e9a593a14e-asg-MAGScoT_cleanbin_000123

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

characteristic: collected by

text: University of Haifa

text: adult sponge tissue

characteristic: environmental medium

text: Israel

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Eilat

characteristic: geographic location (region and locality)

text: coral reef

characteristic: habitat

text: adult

characteristic: host life stage

text: Theonella swinhoei

characteristic: host scientific name

characteristic: host taxid

text: ILIA BURGSDORF | RINAT BAR SHALOM

characteristic: identified by

text: University of Haifa Israel

text: metagenome-assembled genome

text: Sponge: Theonella swinhoei

text: marine coral reef biome

characteristic: local environmental context

text: sponge metagenome

text: Arenicellales bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Arenicellales bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: 4a76996c-7d2b-46e7-ac9b-9b868c0b9261-asg-MAGScoT_cleanbin_000131


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

text: University of Haifa

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult sponge tissue

text: Israel

characteristic: geographic location (country and/or sea)

text: Eilat

text: coral reef

text: adult

text: Theonella swinhoei

text: ILIA BURGSDORF | RINAT BAR SHALOM

text: University of Haifa Israel

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Theonella swinhoei

text: marine coral reef biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: a162f4d7-2664-483a-897d-797f6a832699-asg-MAGScoT_cleanbin_000150

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

characteristic: collected by

text: University of Haifa

text: adult sponge tissue

characteristic: environmental medium

text: Israel

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Eilat

characteristic: geographic location (region and locality)

text: coral reef

characteristic: habitat

text: adult

characteristic: host life stage

text: Theonella swinhoei

characteristic: host scientific name

characteristic: host taxid

text: ILIA BURGSDORF | RINAT BAR SHALOM

characteristic: identified by

text: University of Haifa Israel

text: metagenome-assembled genome

text: Sponge: Theonella swinhoei

text: marine coral reef biome

characteristic: local environmental context

text: sponge metagenome

text: Bryobacterales bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Bryobacterales bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: 902462b9-b4b6-4c0b-8b76-8f0d486e3acf-asg-MAGScoT_cleanbin_000114


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

text: University of Haifa

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult sponge tissue

text: Israel

characteristic: geographic location (country and/or sea)

text: Eilat

text: coral reef

text: adult

text: Theonella swinhoei

text: ILIA BURGSDORF | RINAT BAR SHALOM

text: University of Haifa Israel

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Theonella swinhoei

text: marine coral reef biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Bryobacterales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Bryobacterales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic novelty determined using RED

characteristic: taxonomic identity marker

text: 9cbab3ab-22c6-4969-b0ce-11e81189cbc3-asg-MAGScoT_cleanbin_000138

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

characteristic: collected by

text: University of Haifa

text: adult sponge tissue

characteristic: environmental medium

text: Israel

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Eilat

characteristic: geographic location (region and locality)

text: coral reef

characteristic: habitat

text: adult

characteristic: host life stage

text: Theonella swinhoei

characteristic: host scientific name

characteristic: host taxid

text: ILIA BURGSDORF | RINAT BAR SHALOM

characteristic: identified by

text: University of Haifa Israel

text: metagenome-assembled genome

text: Sponge: Theonella swinhoei

text: marine coral reef biome

characteristic: local environmental context

text: sponge metagenome

text: Caldilineaceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Caldilineaceae bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: 9270bbfe-159b-4ea6-8884-81865277f969-asg-MAGScoT_cleanbin_000072


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

text: University of Haifa

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult sponge tissue

text: Israel

characteristic: geographic location (country and/or sea)

text: Eilat

text: coral reef

text: adult

text: Theonella swinhoei

text: ILIA BURGSDORF | RINAT BAR SHALOM

text: University of Haifa Israel

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Theonella swinhoei

text: marine coral reef biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Candidatus Paceibacterota bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Candidatus Paceibacterota bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic novelty determined using RED

characteristic: taxonomic identity marker

text: a58b20c5-e7c1-409b-ae65-162c110f4bf8-asg-MAGScoT_cleanbin_000176

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

characteristic: collected by

text: University of Haifa

text: adult sponge tissue

characteristic: environmental medium

text: Israel

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Eilat

characteristic: geographic location (region and locality)

text: coral reef

characteristic: habitat

text: adult

characteristic: host life stage

text: Theonella swinhoei

characteristic: host scientific name

characteristic: host taxid

text: ILIA BURGSDORF | RINAT BAR SHALOM

characteristic: identified by

text: University of Haifa Israel

text: metagenome-assembled genome

text: Sponge: Theonella swinhoei

text: marine coral reef biome

characteristic: local environmental context

text: sponge metagenome

text: Candidatus Poribacteria bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Candidatus Poribacteria bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: 295c664a-9c1e-4265-a351-a52547fc5c1a-asg-MAGScoT_cleanbin_000164


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

text: University of Haifa

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult sponge tissue

text: Israel

characteristic: geographic location (country and/or sea)

text: Eilat

text: coral reef

text: adult

text: Theonella swinhoei

text: ILIA BURGSDORF | RINAT BAR SHALOM

text: University of Haifa Israel

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Theonella swinhoei

text: marine coral reef biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Candidatus Poribacteria bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Candidatus Poribacteria bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 7177282c-34fc-4fd4-b9bf-f896a3482e31-asg-MAGScoT_cleanbin_000085

characteristic: title