E-MTAB-13423:Sample 1

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13423:Sample 1

tag: Namespace:The First Hospital of China Medical University

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: breast cancer patient, completed paclitaxel treatment

characteristic: clinical history

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: Protocols: Fecal samples from patients were collected sterilely and stored at 800C. Fecal DNA were extracted with the QIAamp DNA Stool Mini Kit (QIAGEN) and sequenced using tagged amplicon spanning the V3 to V4 region of bacterial 16S rRNA of approximately 540 bp using the Illumina MiSeq sequencer. Sequencing libraries were prepared using Illumina's TruSeq Nano DNA LT Library Prep Kit. 1) First perform sequence end repair on the above amplified product, use the End Repair Mix2 in the kit to remove the overhanging base at the 5' end of the DNA sequence, and at the same time add a phosphate group to fill in the missing base at the 3' end; 2) Add an A base to the 3’ end of the DNA sequence to prevent the DNA fragments from self-ligating and ensure that the target sequence can be connected to the sequencing adapter (there is a protruding T base at the 3’ end of the sequencing adapter); 3) Add a sequencing adapter containing a library-specific tag (i.e. Index sequence) to the 5’ end of the sequence so that DNA molecules can be fixed on the Flow Cell; 4) Use BECKMAN AMPure XP Beads to remove self-ligated adapter fragments through magnetic bead screening, and purify the library system after adding adapters; 5) Perform PCR amplification of the above-mentioned adapter-connected DNA fragments to enrich the sequencing library template, and use BECKMAN AMPure XP Beads to purify the library enrichment product again; 6) Perform final fragment selection and purification of the library through 2% agarose gel electrophoresis.

characteristic: description

text: high paclitaxel-induced peripheral neuropathy

characteristic: disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

characteristic: organism substance

text: human gut metagenome

characteristic: protocol

text: Homo sapiens

text: Sample 1


E-MTAB-13423:Sample 10

status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: The First Hospital of China Medical University

characteristic: INSDC center name

text: public

text: E-MTAB-13423:Sample 10

text: ArrayExpress

text: not collected

text: human

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 10

characteristic: title


E-MTAB-13423:Sample 11

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13423:Sample 11

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 11


E-MTAB-13423:Sample 12

text: public

text: E-MTAB-13423:Sample 12

text: ArrayExpress

characteristic: clinical history

text: not collected

characteristic: collection date

text: human

characteristic: common name

characteristic: description

characteristic: disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

characteristic: organism substance

text: human gut metagenome

text: Homo sapiens

text: Sample 12


E-MTAB-13423:Sample 13

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-13423:Sample 13

text: ArrayExpress

text: not collected

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

characteristic: protocol

text: Homo sapiens

text: Sample 13


E-MTAB-13423:Sample 14

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-13423:Sample 14

text: ArrayExpress

text: not collected

text: human

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 14

characteristic: title


E-MTAB-13423:Sample 15

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13423:Sample 15

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: clinical history

text: not collected

characteristic: collection date

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 15


E-MTAB-13423:Sample 16

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-13423:Sample 16

text: ArrayExpress

text: not collected

text: human

characteristic: common name

characteristic: description

characteristic: disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

characteristic: organism substance

text: human gut metagenome

text: Homo sapiens

text: Sample 16


E-MTAB-13423:Sample 17

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-13423:Sample 17

text: ArrayExpress

text: not collected

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

characteristic: protocol

text: Homo sapiens

text: Sample 17


E-MTAB-13423:Sample 18

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13423:Sample 18

text: ArrayExpress

text: not collected

text: human

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 18

characteristic: title


E-MTAB-13423:Sample 19

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-13423:Sample 19

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: clinical history

text: not collected

characteristic: collection date

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 19


E-MTAB-13423:Sample 2

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-13423:Sample 2

text: ArrayExpress

text: not collected

text: human

characteristic: common name

characteristic: description

characteristic: disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

characteristic: organism substance

text: human gut metagenome

text: Homo sapiens

text: Sample 2


E-MTAB-13423:Sample 20

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13423:Sample 20

text: ArrayExpress

text: not collected

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

characteristic: protocol

text: Homo sapiens

text: Sample 20


E-MTAB-13423:Sample 21

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-13423:Sample 21

text: ArrayExpress

text: not collected

text: human

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 21

characteristic: title


E-MTAB-13423:Sample 22

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-13423:Sample 22

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: clinical history

text: not collected

characteristic: collection date

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 22


E-MTAB-13423:Sample 23

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13423:Sample 23

text: ArrayExpress

text: not collected

text: human

characteristic: common name

characteristic: description

characteristic: disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

characteristic: organism substance

text: human gut metagenome

text: Homo sapiens

text: Sample 23


E-MTAB-13423:Sample 24

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13423:Sample 24

text: ArrayExpress

text: not collected

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

characteristic: protocol

text: Homo sapiens

text: Sample 24


E-MTAB-13423:Sample 25

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-13423:Sample 25

text: ArrayExpress

text: not collected

text: human

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 25

characteristic: title


E-MTAB-13423:Sample 26

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13423:Sample 26

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: clinical history

text: not collected

characteristic: collection date

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 26


E-MTAB-13423:Sample 27

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-13423:Sample 27

text: ArrayExpress

text: not collected

text: human

characteristic: common name

characteristic: description

characteristic: disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

characteristic: organism substance

text: human gut metagenome

text: Homo sapiens

text: Sample 27


E-MTAB-13423:Sample 28

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13423:Sample 28

text: ArrayExpress

text: not collected

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

characteristic: protocol

text: Homo sapiens

text: Sample 28


E-MTAB-13423:Sample 29

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13423:Sample 29

text: ArrayExpress

text: not collected

text: human

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 29

characteristic: title


E-MTAB-13423:Sample 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-13423:Sample 3

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: clinical history

text: not collected

characteristic: collection date

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 3


E-MTAB-13423:Sample 30

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-13423:Sample 30

text: ArrayExpress

text: not collected

text: human

characteristic: common name

characteristic: description

characteristic: disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

characteristic: organism substance

text: human gut metagenome

text: Homo sapiens

text: Sample 30


E-MTAB-13423:Sample 31

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13423:Sample 31

text: ArrayExpress

text: not collected

text: human

text: low paclitaxel-induced peripheral neuropathy

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

characteristic: protocol

text: Homo sapiens

text: Sample 31


E-MTAB-13423:Sample 32

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-13423:Sample 32

text: ArrayExpress

text: not collected

text: human

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 32

characteristic: title


E-MTAB-13423:Sample 33

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-13423:Sample 33

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: clinical history

text: not collected

characteristic: collection date

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 33


E-MTAB-13423:Sample 34

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13423:Sample 34

text: ArrayExpress

text: not collected

text: human

characteristic: common name

characteristic: description

characteristic: disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

characteristic: organism substance

text: human gut metagenome

text: Homo sapiens

text: Sample 34


E-MTAB-13423:Sample 35

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13423:Sample 35

text: ArrayExpress

text: not collected

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

characteristic: protocol

text: Homo sapiens

text: Sample 35


E-MTAB-13423:Sample 36

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-13423:Sample 36

text: ArrayExpress

text: not collected

text: human

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 36

characteristic: title


E-MTAB-13423:Sample 37

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13423:Sample 37

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: clinical history

text: not collected

characteristic: collection date

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 37


E-MTAB-13423:Sample 38

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-13423:Sample 38

text: ArrayExpress

text: not collected

text: human

characteristic: common name

characteristic: description

characteristic: disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

characteristic: organism substance

text: human gut metagenome

text: Homo sapiens

text: Sample 38


E-MTAB-13423:Sample 39

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13423:Sample 39

text: ArrayExpress

text: not collected

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

characteristic: protocol

text: Homo sapiens

text: Sample 39


E-MTAB-13423:Sample 4

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13423:Sample 4

text: ArrayExpress

text: not collected

text: human

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 4

characteristic: title


E-MTAB-13423:Sample 40

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-13423:Sample 40

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: clinical history

text: not collected

characteristic: collection date

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 40


E-MTAB-13423:Sample 41

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-13423:Sample 41

text: ArrayExpress

text: not collected

text: human

characteristic: common name

characteristic: description

characteristic: disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

characteristic: organism substance

text: human gut metagenome

text: Homo sapiens

text: Sample 41


E-MTAB-13423:Sample 42

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13423:Sample 42

text: ArrayExpress

text: not collected

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

characteristic: protocol

text: Homo sapiens

text: Sample 42


E-MTAB-13423:Sample 43

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-13423:Sample 43

text: ArrayExpress

text: not collected

text: human

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 43

characteristic: title


E-MTAB-13423:Sample 44

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-13423:Sample 44

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: clinical history

text: not collected

characteristic: collection date

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 44


E-MTAB-13423:Sample 45

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13423:Sample 45

text: ArrayExpress

text: not collected

text: human

characteristic: common name

characteristic: description

characteristic: disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

characteristic: organism substance

text: human gut metagenome

text: Homo sapiens

text: Sample 45


E-MTAB-13423:Sample 46

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13423:Sample 46

text: ArrayExpress

text: not collected

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

characteristic: protocol

text: Homo sapiens

text: Sample 46


E-MTAB-13423:Sample 47

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-13423:Sample 47

text: ArrayExpress

text: not collected

text: human

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 47

characteristic: title


E-MTAB-13423:Sample 48

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13423:Sample 48

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: clinical history

text: not collected

characteristic: collection date

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 48


E-MTAB-13423:Sample 49

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-13423:Sample 49

text: ArrayExpress

text: not collected

text: human

characteristic: common name

characteristic: description

characteristic: disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

characteristic: organism substance

text: human gut metagenome

text: Homo sapiens

text: Sample 49


E-MTAB-13423:Sample 5

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13423:Sample 5

text: ArrayExpress

text: not collected

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

characteristic: protocol

text: Homo sapiens

text: Sample 5


E-MTAB-13423:Sample 50

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13423:Sample 50

text: ArrayExpress

text: not collected

text: human

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 50

characteristic: title


E-MTAB-13423:Sample 51

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-13423:Sample 51

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: clinical history

text: not collected

characteristic: collection date

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 51


E-MTAB-13423:Sample 52

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-13423:Sample 52

text: ArrayExpress

text: not collected

text: human

characteristic: common name

characteristic: description

characteristic: disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

characteristic: organism substance

text: human gut metagenome

text: Homo sapiens

text: Sample 52


E-MTAB-13423:Sample 53

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13423:Sample 53

text: ArrayExpress

text: not collected

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

characteristic: protocol

text: Homo sapiens

text: Sample 53


E-MTAB-13423:Sample 54

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-13423:Sample 54

text: ArrayExpress

text: not collected

text: human

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 54

characteristic: title


E-MTAB-13423:Sample 55

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-13423:Sample 55

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: clinical history

text: not collected

characteristic: collection date

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 55


E-MTAB-13423:Sample 56

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13423:Sample 56

text: ArrayExpress

text: not collected

text: human

characteristic: common name

characteristic: description

characteristic: disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

characteristic: organism substance

text: human gut metagenome

text: Homo sapiens

text: Sample 56


E-MTAB-13423:Sample 57

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13423:Sample 57

text: ArrayExpress

text: not collected

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

characteristic: protocol

text: Homo sapiens

text: Sample 57


E-MTAB-13423:Sample 58

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-13423:Sample 58

text: ArrayExpress

text: not collected

text: human

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 58

characteristic: title


E-MTAB-13423:Sample 59

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13423:Sample 59

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: clinical history

text: not collected

characteristic: collection date

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 59


E-MTAB-13423:Sample 6

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-13423:Sample 6

text: ArrayExpress

text: not collected

text: human

characteristic: common name

characteristic: description

characteristic: disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

characteristic: organism substance

text: human gut metagenome

text: Homo sapiens

text: Sample 6


E-MTAB-13423:Sample 60

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13423:Sample 60

text: ArrayExpress

text: not collected

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

characteristic: protocol

text: Homo sapiens

text: Sample 60


E-MTAB-13423:Sample 61

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13423:Sample 61

text: ArrayExpress

text: not collected

text: human

text: normal

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 61

characteristic: title


E-MTAB-13423:Sample 62

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-13423:Sample 62

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: clinical history

text: not collected

characteristic: collection date

text: human

text: normal

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 62


E-MTAB-13423:Sample 63

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-13423:Sample 63

text: ArrayExpress

text: not collected

text: human

characteristic: common name

characteristic: description

text: normal

characteristic: disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

characteristic: organism substance

text: human gut metagenome

text: Homo sapiens

text: Sample 63


E-MTAB-13423:Sample 64

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13423:Sample 64

text: ArrayExpress

text: not collected

text: human

text: normal

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

characteristic: protocol

text: Homo sapiens

text: Sample 64


E-MTAB-13423:Sample 65

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-13423:Sample 65

text: ArrayExpress

text: not collected

text: human

text: normal

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 65

characteristic: title


E-MTAB-13423:Sample 66

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-13423:Sample 66

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: clinical history

text: not collected

characteristic: collection date

text: human

text: normal

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 66


E-MTAB-13423:Sample 67

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13423:Sample 67

text: ArrayExpress

text: not collected

text: human

characteristic: common name

characteristic: description

text: normal

characteristic: disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

characteristic: organism substance

text: human gut metagenome

text: Homo sapiens

text: Sample 67


E-MTAB-13423:Sample 68

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13423:Sample 68

text: ArrayExpress

text: not collected

text: human

text: normal

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

characteristic: protocol

text: Homo sapiens

text: Sample 68


E-MTAB-13423:Sample 69

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-13423:Sample 69

text: ArrayExpress

text: not collected

text: human

text: normal

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 69

characteristic: title


E-MTAB-13423:Sample 7

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13423:Sample 7

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: clinical history

text: not collected

characteristic: collection date

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 7


E-MTAB-13423:Sample 70

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-13423:Sample 70

text: ArrayExpress

text: not collected

text: human

characteristic: common name

characteristic: description

text: normal

characteristic: disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

characteristic: organism substance

text: human gut metagenome

text: Homo sapiens

text: Sample 70


E-MTAB-13423:Sample 71

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13423:Sample 71

text: ArrayExpress

text: not collected

text: human

text: normal

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

characteristic: protocol

text: Homo sapiens

text: Sample 71


E-MTAB-13423:Sample 72

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13423:Sample 72

text: ArrayExpress

text: not collected

text: human

text: normal

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 72

characteristic: title


E-MTAB-13423:Sample 73

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-13423:Sample 73

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: clinical history

text: not collected

characteristic: collection date

text: human

text: normal

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 73


E-MTAB-13423:Sample 74

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-13423:Sample 74

text: ArrayExpress

text: not collected

text: human

characteristic: common name

characteristic: description

text: normal

characteristic: disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

characteristic: organism substance

text: human gut metagenome

text: Homo sapiens

text: Sample 74


E-MTAB-13423:Sample 75

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13423:Sample 75

text: ArrayExpress

text: not collected

text: human

text: normal

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

characteristic: protocol

text: Homo sapiens

text: Sample 75


E-MTAB-13423:Sample 76

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-13423:Sample 76

text: ArrayExpress

text: not collected

text: human

text: normal

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 76

characteristic: title


E-MTAB-13423:Sample 77

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-13423:Sample 77

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: clinical history

text: not collected

characteristic: collection date

text: human

text: normal

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 77


E-MTAB-13423:Sample 78

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13423:Sample 78

text: ArrayExpress

text: not collected

text: human

characteristic: common name

characteristic: description

text: normal

characteristic: disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

characteristic: organism substance

text: human gut metagenome

text: Homo sapiens

text: Sample 78


E-MTAB-13423:Sample 79

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13423:Sample 79

text: ArrayExpress

text: not collected

text: human

text: normal

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

characteristic: protocol

text: Homo sapiens

text: Sample 79


E-MTAB-13423:Sample 8

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: E-MTAB-13423:Sample 8

text: ArrayExpress

text: not collected

text: human

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 8

characteristic: title


E-MTAB-13423:Sample 80

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-13423:Sample 80

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

characteristic: clinical history

text: not collected

characteristic: collection date

text: human

text: normal

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

text: human gut metagenome

text: Homo sapiens

text: Sample 80


E-MTAB-13423:Sample 9

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: E-MTAB-13423:Sample 9

text: ArrayExpress

text: not collected

text: human

characteristic: common name

characteristic: description

characteristic: disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: feces

characteristic: organism substance

text: human gut metagenome

text: Homo sapiens

text: Sample 9


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Statens Serum Institut

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Passage

characteristic: SRA accession

tag: Namespace:Statens Serum Institut

text: Vero

text: Department of Virus and Microbiological Special Diagnostics, Statens Serum Institut, Copenhagen, Denmark

characteristic: collecting institution

text: Virus RnD Laboratory

characteristic: collector name

text: no description provided

text: Denmark

text: Hovedstaden

characteristic: geographic location (region and locality)

text: African Green Monkey

characteristic: host common name

text: not provided

characteristic: host description

text: not provided

characteristic: host health state

text: Chlorocebus sabaeus

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: Severe acute respiratory syndrome coronavirus 2

text: Culture Isolate from Surveillance Sample

characteristic: sample capture status

text: B.1 Culture Isolate P3


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Statens Serum Institut

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Vero E6

characteristic: collection date

text: Virus RnD Laboratory

text: no description provided

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

text: African Green Monkey

text: not provided

text: not provided

text: Chlorocebus sabaeus

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

text: BA.2 Culture Isolate P2

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Statens Serum Institut

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Passage

characteristic: SRA accession

text: Vero E6

characteristic: collecting institution

text: Virus RnD Laboratory

characteristic: collector name

text: no description provided

text: Denmark

text: Hovedstaden

characteristic: geographic location (region and locality)

text: African Green Monkey

characteristic: host common name

text: not provided

characteristic: host description

text: not provided

text: Chlorocebus sabaeus

text: not provided

text: not provided

text: BA.5 Culture Isolate P3


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Statens Serum Institut

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Vero E6

characteristic: collection date

text: Virus RnD Laboratory

text: no description provided

text: Denmark

text: Hovedstaden

text: African Green Monkey

text: not provided

text: not provided

characteristic: host health state

text: Chlorocebus sabaeus

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

characteristic: sample capture status

text: XBB.1.4.1 Culture Isolate P2


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Statens Serum Institut

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Passage

characteristic: SRA accession

text: Vero E6

text: Virus RnD Laboratory

text: no description provided

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

text: African Green Monkey

text: not provided

text: not provided

text: Chlorocebus sabaeus

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

text: EG.5.1 Culture Isolate P2

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Statens Serum Institut

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Vero E6

characteristic: collecting institution

characteristic: collection date

text: Virus RnD Laboratory

characteristic: collector name

text: no description provided

text: Denmark

text: Hovedstaden

characteristic: geographic location (region and locality)

text: African Green Monkey

characteristic: host common name

text: not provided

characteristic: host description

text: not provided

text: Chlorocebus sabaeus

text: not provided

text: not provided

text: BA.2.86 Culture Isolate P2


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

characteristic: Sequence type

tag: Namespace:CENTRE DE RESSOURCES BIOLOGIQUES-FILIERE MICROBIOLOGIQUE, BESANCON

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: Spain

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

text: Not collected

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Canis lupus familiaris

characteristic: host scientific name

text: Not collected

characteristic: host sex

text: Missing

characteristic: host subject id

text: UTI: Cystocentesis Urine Sample

characteristic: isolation source host-associated

text: Not applicable

characteristic: isolation source non-host-associated

text: Escherichia coli

text: Escherichia coli

text: Missing

characteristic: serovar

text: Not provided

characteristic: strain

text: Genome analysis of Enterobacteriaceae with non-wild type susceptibility to third-generation cephalosporins recovered from diseased companion animals in Europe (2017-2018)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CENTRE DE RESSOURCES BIOLOGIQUES-FILIERE MICROBIOLOGIQUE, BESANCON

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: Spain

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

characteristic: host description

text: Not collecte

text: Diseased

text: Felis catus

text: Not collecte

text: Missing

characteristic: isolate

text: UTI: Cystocentesis Urine Sample

text: Not applicable

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: Missing

text: Not provided

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

characteristic: Sequence type

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: Germany

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Felis catus

characteristic: host scientific name

text: Not collecte

characteristic: host sex

text: Missing

characteristic: host subject id

text: UTI: Cystocentesis Urine Sample

characteristic: isolation source host-associated

text: Not applicable

characteristic: isolation source non-host-associated

text: Escherichia coli

text: Escherichia coli

text: Missing

text: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: Germany

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

characteristic: host description

text: Not collecte

text: Diseased

text: Felis catus

text: Not collecte

text: Missing

characteristic: isolate

text: SSI: Other

text: Not applicable

text: Escherichia coli

text: Escherichia coli

text: Missing

characteristic: serovar

text: Not provided

characteristic: strain


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

characteristic: Sequence type

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: Germany

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Canis lupus familiaris

characteristic: host scientific name

text: Not collecte

characteristic: host sex

text: Missing

characteristic: host subject id

text: SSI: Abscess Cavity

text: Not applicable

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: Missing

text: Not provided

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: Germany

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

characteristic: host description

text: Not collecte

text: Diseased

text: Canis lupus familiaris

text: Not collecte

text: Missing

characteristic: isolate

text: UTI: Cystocentesis Urine Sample

characteristic: isolation source host-associated

text: Not applicable

characteristic: isolation source non-host-associated

text: Escherichia coli

text: Escherichia coli

text: Missing

text: Not provided


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

characteristic: Sequence type

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: Germany

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Canis lupus familiaris

characteristic: host scientific name

text: Not collecte

characteristic: host sex

text: Missing

characteristic: host subject id

text: RT: Pharyngeal Specimen

text: Not applicable

text: Escherichia coli

text: Escherichia coli

text: Missing

characteristic: serovar

text: Not provided

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: Germany

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

characteristic: host description

text: Not collecte

text: Diseased

text: Canis lupus familiaris

text: Not collecte

text: Missing

characteristic: isolate

text: SSI: Wound Swab

text: Not applicable

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: Missing

text: Not provided

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

characteristic: Sequence type

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: Germany

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Felis catus

characteristic: host scientific name

text: Not collecte

characteristic: host sex

text: Missing

characteristic: host subject id

text: RT: Nasal Specimen

characteristic: isolation source host-associated

text: Not applicable

characteristic: isolation source non-host-associated

text: Escherichia coli

text: Escherichia coli

text: Missing

text: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: Italy

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

characteristic: host description

text: Not collecte

text: Diseased

text: Felis catus

text: Not collecte

text: Missing

characteristic: isolate

text: UTI: Cystocentesis Urine Sample

text: Not applicable

text: Escherichia coli

text: Escherichia coli

text: Missing

characteristic: serovar

text: Not provided

characteristic: strain


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

characteristic: Sequence type

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: Italy

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Canis lupus familiaris

characteristic: host scientific name

text: Not collecte

characteristic: host sex

text: Missing

characteristic: host subject id

text: UTI: Cystocentesis Urine Sample

text: Not applicable

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: Missing

text: Not provided

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: Italy

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

characteristic: host description

text: Not collecte

text: Diseased

text: Canis lupus familiaris

text: Not collecte

text: Missing

characteristic: isolate

text: SSI: Pyoderma Lesion

characteristic: isolation source host-associated

text: Not applicable

characteristic: isolation source non-host-associated

text: Escherichia coli

text: Escherichia coli

text: Missing

text: Not provided


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

characteristic: Sequence type

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: Hungary

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Canis lupus familiaris

characteristic: host scientific name

text: Not collecte

characteristic: host sex

text: Missing

characteristic: host subject id

text: UTI: Cystocentesis Urine Sample

text: Not applicable

text: Escherichia coli

text: Escherichia coli

text: Missing

characteristic: serovar

text: Not provided

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: Hungary

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

characteristic: host description

text: Not collecte

text: Diseased

text: Felis catus

text: Not collecte

text: Missing

characteristic: isolate

text: RT: Nasal Specimen

text: Not applicable

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: Missing

text: Not provided

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

characteristic: Sequence type

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: France

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Canis lupus familiaris

characteristic: host scientific name

text: Not collecte

characteristic: host sex

text: Missing

characteristic: host subject id

text: UTI: Cystocentesis Urine Sample

characteristic: isolation source host-associated

text: Not applicable

characteristic: isolation source non-host-associated

text: Escherichia coli

text: Escherichia coli

text: Missing

text: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: France

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

characteristic: host description

text: Not collecte

text: Diseased

text: Canis lupus familiaris

text: Not collecte

text: Missing

characteristic: isolate

text: RT: Broncho-alveolar Washing

text: Not applicable

text: Escherichia coli

text: Escherichia coli

text: Missing

characteristic: serovar

text: Not provided

characteristic: strain


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

characteristic: Sequence type

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: France

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Canis lupus familiaris

characteristic: host scientific name

text: Not collecte

characteristic: host sex

text: Missing

characteristic: host subject id

text: UTI: Other

text: Not applicable

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: Missing

text: Not provided

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: Belgium

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

characteristic: host description

text: Not collecte

text: Diseased

text: Canis lupus familiaris

text: Not collecte

text: Missing

characteristic: isolate

text: UTI: Cystocentesis Urine Sample

characteristic: isolation source host-associated

text: Not applicable

characteristic: isolation source non-host-associated

text: Escherichia coli

text: Escherichia coli

text: Missing

text: Not provided


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

characteristic: Sequence type

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: Spain

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Canis lupus familiaris

characteristic: host scientific name

text: Not collecte

characteristic: host sex

text: Missing

characteristic: host subject id

text: SSI: Pyoderma Lesion

text: Not applicable

text: Escherichia coli

text: Escherichia coli

text: Missing

characteristic: serovar

text: Not provided

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: Germany

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

characteristic: host description

text: Not collecte

text: Diseased

text: Canis lupus familiaris

text: Not collecte

text: Missing

characteristic: isolate

text: RT: Conjunctival Swab

text: Not applicable

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: Missing

text: Not provided

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

characteristic: Sequence type

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: Germany

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Felis catus

characteristic: host scientific name

text: Not collecte

characteristic: host sex

text: Missing

characteristic: host subject id

text: UTI: Cystocentesis Urine Sample

characteristic: isolation source host-associated

text: Not applicable

characteristic: isolation source non-host-associated

text: Escherichia coli

text: Escherichia coli

text: Missing

text: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: France

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

characteristic: host description

text: Not collecte

text: Diseased

text: Canis lupus familiaris

text: Not collecte

text: Missing

characteristic: isolate

text: SSI: Other

text: Not applicable

text: Escherichia coli

text: Escherichia coli

text: Missing

characteristic: serovar

text: Not provided

characteristic: strain


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

text: new ST

characteristic: Sequence type

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: Italy

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Canis lupus familiaris

characteristic: host scientific name

text: Not collecte

characteristic: host sex

text: Missing

characteristic: host subject id

text: SSI: Ear Canal Swab

text: Not applicable

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: Missing

text: Not provided

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: Hungary

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

characteristic: host description

text: Not collecte

text: Diseased

text: Canis lupus familiaris

text: Not collecte

text: Missing

characteristic: isolate

text: RT: Broncho-alveolar Washing

characteristic: isolation source host-associated

text: Not applicable

characteristic: isolation source non-host-associated

text: Escherichia coli

text: Escherichia coli

text: Missing

text: Not provided


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

characteristic: Sequence type

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: Poland

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Canis lupus familiaris

characteristic: host scientific name

text: Not collecte

characteristic: host sex

text: Missing

characteristic: host subject id

text: UTI: Midstream Voided Morning Urine

text: Not applicable

text: Escherichia coli

text: Escherichia coli

text: Missing

characteristic: serovar

text: Not provided

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: Poland

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

characteristic: host description

text: Not collecte

text: Diseased

text: Felis catus

text: Not collecte

text: Missing

characteristic: isolate

text: UTI: Midstream Voided Morning Urine

text: Not applicable

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: Missing

text: Not provided

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

characteristic: Sequence type

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: United Kingdom

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Canis lupus familiaris

characteristic: host scientific name

text: Not collecte

characteristic: host sex

text: Missing

characteristic: host subject id

text: SSI: Ear Canal Swab

characteristic: isolation source host-associated

text: Not applicable

characteristic: isolation source non-host-associated

text: Escherichia coli

text: Escherichia coli

text: Missing

text: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

characteristic: host description

text: Not collecte

text: Diseased

text: Canis lupus familiaris

text: Not collecte

text: Missing

characteristic: isolate

text: SSI: Ear Canal Swab

text: Not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: Missing

characteristic: serovar

text: Not provided

characteristic: strain


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

characteristic: Sequence type

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: Spain

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Canis lupus familiaris

characteristic: host scientific name

text: Not collecte

characteristic: host sex

text: Missing

characteristic: host subject id

text: SSI: Wound Swab

text: Not applicable

text: Klebsiella pneumoniae

characteristic: organism

text: Klebsiella pneumoniae

text: Missing

text: Not provided

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: Germany

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

characteristic: host description

text: Not collecte

text: Diseased

text: Felis catus

text: Not collecte

text: Missing

characteristic: isolate

text: SSI: Other

characteristic: isolation source host-associated

text: Not applicable

characteristic: isolation source non-host-associated

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: Missing

text: Not provided


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

characteristic: Sequence type

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: Germany

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Felis catus

characteristic: host scientific name

text: Not collecte

characteristic: host sex

text: Missing

characteristic: host subject id

text: UTI: Catheterized Urine Sample

text: Not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: Missing

characteristic: serovar

text: Not provided

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: Germany

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

characteristic: host description

text: Not collecte

text: Diseased

text: Felis catus

text: Not collecte

text: Missing

characteristic: isolate

text: UTI: Midstream Voided Morning Urine

text: Not applicable

text: Klebsiella pneumoniae

characteristic: organism

text: Klebsiella pneumoniae

text: Missing

text: Not provided

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

characteristic: Sequence type

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: France

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Canis lupus familiaris

characteristic: host scientific name

text: Not collecte

characteristic: host sex

text: Missing

characteristic: host subject id

text: RT: Broncho-alveolar Washing

characteristic: isolation source host-associated

text: Not applicable

characteristic: isolation source non-host-associated

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: Missing

text: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: Italy

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

characteristic: host description

text: Not collecte

text: Diseased

text: Canis lupus familiaris

text: Not collecte

text: Missing

characteristic: isolate

text: SSI: Pyoderma Lesion

text: Not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: Missing

characteristic: serovar

text: Not provided

characteristic: strain


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

characteristic: Sequence type

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: Belgium

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Canis lupus familiaris

characteristic: host scientific name

text: Not collecte

characteristic: host sex

text: Missing

characteristic: host subject id

text: UTI: Midstream Voided Morning Urine

text: Not applicable

text: Klebsiella pneumoniae

characteristic: organism

text: Klebsiella pneumoniae

text: Missing

text: Not provided

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: Germany

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

characteristic: host description

text: Not collecte

text: Diseased

text: Canis lupus familiaris

text: Not collecte

text: Missing

characteristic: isolate

text: SSI: Wound Swab

characteristic: isolation source host-associated

text: Not applicable

characteristic: isolation source non-host-associated

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: Missing

text: Not provided


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

characteristic: Sequence type

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: Germany

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Canis lupus familiaris

characteristic: host scientific name

text: Not collecte

characteristic: host sex

text: Missing

characteristic: host subject id

text: UTI: Cystocentesis Urine Sample

text: Not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: Missing

characteristic: serovar

text: Not provided

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: France

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

characteristic: host description

text: Not collecte

text: Diseased

text: Felis catus

text: Not collecte

text: Missing

characteristic: isolate

text: UTI: Other

text: Not applicable

text: Klebsiella pneumoniae

characteristic: organism

text: Klebsiella pneumoniae

text: Missing

text: Not provided

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

characteristic: Sequence type

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: Netherlands

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Canis lupus familiaris

characteristic: host scientific name

text: Not collecte

characteristic: host sex

text: Missing

characteristic: host subject id

text: SSI: Pyoderma Lesion

characteristic: isolation source host-associated

text: Not applicable

characteristic: isolation source non-host-associated

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: Missing

text: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: Poland

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

characteristic: host description

text: Not collecte

text: Diseased

text: Canis lupus familiaris

text: Not collecte

text: Missing

characteristic: isolate

text: RT: Nasal Specimen

text: Not applicable

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: Missing

characteristic: serovar

text: Not provided

characteristic: strain


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: France

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Felis catus

characteristic: host scientific name

text: Not collecte

characteristic: host sex

text: Missing

characteristic: host subject id

text: RT: Broncho-alveolar Washing

text: Not applicable

text: Klebsiella oxytoca

characteristic: organism

text: Klebsiella oxytoca

text: Missing

text: Not provided

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: Italy

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

characteristic: host description

text: Not collecte

text: Diseased

text: Canis lupus familiaris

text: Not collecte

text: Missing

text: RT: Broncho-alveolar Washing

characteristic: isolation source host-associated

text: Not applicable

characteristic: isolation source non-host-associated

text: Klebsiella oxytoca

text: Klebsiella oxytoca

text: Missing

text: Not provided


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: Poland

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Canis lupus familiaris

characteristic: host scientific name

text: Not collecte

characteristic: host sex

text: Missing

characteristic: isolate

text: SSI: Wound Swab

text: Not applicable

text: Klebsiella oxytoca

text: Klebsiella oxytoca

text: Missing

characteristic: serovar

text: Not provided

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: Italy

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

text: Not collecte

text: Diseased

text: Canis lupus familiaris

text: Not collecte

text: Missing

characteristic: host subject id

text: SSI: Pyoderma Lesion

text: Not applicable

text: Proteus mirabilis

characteristic: organism

text: Proteus mirabilis

text: Missing

text: Not provided

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: Italy

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

characteristic: host description

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Felis catus

characteristic: host scientific name

text: Not collecte

characteristic: host sex

text: Missing

text: UTI: Catheterized Urine Sample

characteristic: isolation source host-associated

text: Not applicable

characteristic: isolation source non-host-associated

text: Proteus mirabilis

text: Proteus mirabilis

text: Missing

text: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: Belgium

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

text: Not collecte

text: Diseased

text: Felis catus

text: Not collecte

text: Missing

characteristic: isolate

text: UTI: Midstream Voided Morning Urine

text: Not applicable

text: Proteus mirabilis

text: Proteus mirabilis

text: Missing

characteristic: serovar

text: Not provided

characteristic: strain


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: Netherlands

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

characteristic: host description

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Felis catus

characteristic: host scientific name

text: Not collecte

text: Missing

characteristic: host subject id

text: UTI: Cystocentesis Urine Sample

text: Not applicable

text: Proteus mirabilis

characteristic: organism

text: Proteus mirabilis

text: Missing

text: Not provided

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: Poland

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

text: Not collecte

text: Diseased

text: Canis lupus familiaris

text: Not collecte

characteristic: host sex

text: Missing

text: UTI: Midstream Voided Morning Urine

characteristic: isolation source host-associated

text: Not applicable

characteristic: isolation source non-host-associated

text: Proteus mirabilis

text: Proteus mirabilis

text: Missing

text: Not provided


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: Poland

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

characteristic: host description

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Canis lupus familiaris

characteristic: host scientific name

text: Not collecte

text: Missing

characteristic: isolate

text: SSI: Wound Swab

text: Not applicable

text: Proteus mirabilis

text: Proteus mirabilis

text: Missing

characteristic: serovar

text: Not provided

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: Germany

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

text: Not collecte

text: Diseased

text: Felis catus

text: Not collecte

text: Missing

characteristic: host subject id

text: SSI: Wound Swab

text: Not applicable

text: Proteus vulgaris

characteristic: organism

text: Proteus vulgaris

text: Missing

text: Not provided

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: No

characteristic: Is the sequenced pathogen host associated?

characteristic: SRA accession

text: Not provided

text: ComPath Study Group, Brussels, Belgium

text: Not provided

text: Not provided

text: No

text: Poland

text: Not provided

characteristic: geographic location (latitude)

text: Not provided

characteristic: geographic location (longitude)

text: Companion animals

characteristic: host description

text: Not collecte

characteristic: host disease status

text: Diseased

characteristic: host health state

text: Felis catus

characteristic: host scientific name

text: Not collecte

characteristic: host sex

text: Missing

text: UTI: Catheterized Urine Sample

characteristic: isolation source host-associated

text: Not applicable

characteristic: isolation source non-host-associated

text: Proteus hauseri

text: Proteus hauseri

text: Missing

text: Not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: No

characteristic: Submitter Id

text: Not provided

text: ComPath Study Group, Brussels, Belgium

characteristic: collection date

text: Not provided

text: Not provided

characteristic: description

text: No

text: Sweden

characteristic: geographic location (country and/or sea)

text: Not provided

text: Not provided

text: Companion animals

text: Not collecte

text: Diseased

text: Felis catus

text: Not collecte

text: Missing

characteristic: isolate

text: SSI: Abscess Cavity

text: Not applicable

text: Proteus vulgaris

text: Proteus vulgaris

text: Missing

characteristic: serovar

text: Not provided

characteristic: strain


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Institute for Infectious Diseases, Bern, Switzerland

text: SIB

characteristic: broker name

text: Institute for Infectious Diseases, University of Bern, Switzerland

characteristic: collecting institution

text: Lea Stauber, Christian Baumann, Miguel A Terrazos Miani, Sonja Gempeler, Loïc Borcard, Stefan Neuenschwander, Cora Sägesser, Pascal Bittel, Peter Keller, Franziska Suter-Riniker, Stephen L Leib, Alban Ramette

characteristic: collector name

text: Switzerland

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-231009_os_17/2023

characteristic: organism

text: active surveillance not initiated by an outbreak

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute for Infectious Diseases, Bern, Switzerland

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-231009_os_14/2023

characteristic: isolate


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-231009_os_42/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-231009_os_03/2023

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-231009_os_32/2023

characteristic: isolate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: SRA accession

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-231009_os_34/2023


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SIB

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-231009_os_19/2023

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-231009_os_37/2023

characteristic: isolate