characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaspades v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

text: EBI-EMG

characteristic: collection date

text: CheckM

characteristic: description

text: plaque biofilm

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: Prevotella histicola

characteristic: organism

text: Prevotella histicola

text: Illumina NovaSeq 6000

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella histicola

text: multi-marker approach

text: Metagenome-Assembled Genome: ERR9969249_bin.27_MetaWRAP_v1.3_MAG


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaspades v3.15.3

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

text: MetaWRAP v1.3

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) metagenome-assembled genome assembled from the metagenomic run ERR9969249 of study ERP139515.

text: plaque biofilm

characteristic: environmental medium

text: Australia

unit: DD

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: Selenomonas sputigena

text: Antibiotic overuse has promoted the spread of antimicrobial resistance (AMR) with significant health and economic consequences. Surveillance of resistance reservoirs, like the rarely explored oral microbiome, is necessary to combat AMR. We characterised the development of the paediatric oral resistome and investigated its role in dental caries in 221 twin children sampled over the first decade of life. From 535 oral metagenomes, we identified 309 antimicrobial resistance genes (ARGs), which significantly clustered by age, with the influence of host genetics on antimicrobial resistance increasing over time. Our results suggest the mobilisation potential of ARGs increased with age as Tn916 transposase was co-located with more species and ARGs as children grew. Dental caries compared to health was associated with a depletion of ARGs and species, which was reversed when restored. Our results highlight the dynamic nature of the paediatric oral resistome, and its potential role in transmission of AMR and dysbiosis.

characteristic: project name

characteristic: sample derived from

text: Selenomonas sputigena

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Selenomonas;s__Selenomonas sputigena

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: ERR9969249_bin.30_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaspades v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

text: EBI-EMG

characteristic: collection date

text: CheckM

characteristic: description

text: plaque biofilm

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: uncultured Candidatus Saccharibacteria bacterium

characteristic: organism

text: Illumina NovaSeq 6000

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Candidatus Saccharibacteria;c__;o__;f__;g__;s__

text: multi-marker approach

text: Metagenome-Assembled Genome: ERR9969249_bin.36_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaspades v3.15.3

text: MetaWRAP v1.3

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) metagenome-assembled genome assembled from the metagenomic run ERR9969250 of study ERP139515.

text: plaque biofilm

characteristic: environmental medium

text: Australia

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: uncultured Mesocricetibacter sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Mesocricetibacter sp.

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Mesocricetibacter;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: ERR9969250_bin.21_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaspades v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

text: EBI-EMG

characteristic: collection date

text: CheckM

characteristic: description

text: plaque biofilm

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: uncultured Kingella sp.

characteristic: organism

text: uncultured Kingella sp.

text: Illumina NovaSeq 6000

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Kingella;s__

text: multi-marker approach

text: Metagenome-Assembled Genome: ERR9969250_bin.25_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaspades v3.15.3

text: MetaWRAP v1.3

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: plaque biofilm

characteristic: environmental medium

text: Australia

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: Klebsiella aerogenes

characteristic: project name

characteristic: sample derived from

text: Klebsiella aerogenes

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Klebsiella;s__Klebsiella aerogenes

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: ERR9969250_bin.26_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaspades v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

text: EBI-EMG

characteristic: collection date

text: CheckM

text: This sample represents a Third Party Annotation (TPA) metagenome-assembled genome assembled from the metagenomic run ERR9969252 of study ERP139515.

characteristic: description

text: plaque biofilm

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: uncultured Gemella sp.

characteristic: organism

text: uncultured Gemella sp.

text: Illumina NovaSeq 6000

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__;g__Gemella;s__

text: multi-marker approach

text: Metagenome-Assembled Genome: ERR9969252_bin.18_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaspades v3.15.3

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

text: MetaWRAP v1.3

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: plaque biofilm

characteristic: environmental medium

text: Australia

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: uncultured Granulicatella sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Granulicatella sp.

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Granulicatella;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: ERR9969252_bin.20_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaspades v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

text: EBI-EMG

characteristic: collection date

text: CheckM

characteristic: description

text: plaque biofilm

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: Corynebacterium variabile

characteristic: organism

text: Antibiotic overuse has promoted the spread of antimicrobial resistance (AMR) with significant health and economic consequences. Surveillance of resistance reservoirs, like the rarely explored oral microbiome, is necessary to combat AMR. We characterised the development of the paediatric oral resistome and investigated its role in dental caries in 221 twin children sampled over the first decade of life. From 535 oral metagenomes, we identified 309 antimicrobial resistance genes (ARGs), which significantly clustered by age, with the influence of host genetics on antimicrobial resistance increasing over time. Our results suggest the mobilisation potential of ARGs increased with age as Tn916 transposase was co-located with more species and ARGs as children grew. Dental caries compared to health was associated with a depletion of ARGs and species, which was reversed when restored. Our results highlight the dynamic nature of the paediatric oral resistome, and its potential role in transmission of AMR and dysbiosis.

text: Corynebacterium variabile

text: Illumina NovaSeq 6000

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Actinobacteria;c__Actinomycetia;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium variabile

text: multi-marker approach

text: Metagenome-Assembled Genome: ERR9969252_bin.26_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaspades v3.15.3

text: MetaWRAP v1.3

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: plaque biofilm

characteristic: environmental medium

text: Australia

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: uncultured Enterococcaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Enterococcaceae bacterium

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: ERR9969252_bin.3_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaspades v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

text: EBI-EMG

characteristic: collection date

text: CheckM

characteristic: description

text: plaque biofilm

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: Haemophilus sputorum

characteristic: organism

text: Haemophilus sputorum

text: Illumina NovaSeq 6000

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Haemophilus;s__Haemophilus sputorum

text: multi-marker approach

text: Metagenome-Assembled Genome: ERR9969252_bin.33_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaspades v3.15.3

text: MetaWRAP v1.3

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: plaque biofilm

characteristic: environmental medium

text: Australia

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: Enterococcus devriesei

characteristic: project name

characteristic: sample derived from

text: Enterococcus devriesei

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus devriesei

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: ERR9969252_bin.38_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaspades v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

text: EBI-EMG

characteristic: collection date

text: CheckM

characteristic: description

text: plaque biofilm

text: Australia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: Fusobacterium pseudoperiodonticum

characteristic: organism

text: Fusobacterium pseudoperiodonticum

text: Illumina NovaSeq 6000

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium;s__Fusobacterium pseudoperiodonticum

text: multi-marker approach

text: Metagenome-Assembled Genome: ERR9969252_bin.7_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IMEDEA

text: public

text: subsurface water

text: Spain

text: subsurface metagenome

text: subsurface metagenome

text: Sample T1

characteristic: title


text: IMEDEA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: subsurface water

text: Spain

text: subsurface metagenome

text: subsurface metagenome

text: Sample T3


text: IMEDEA

text: public

characteristic: Submitter Id

text: subsurface water

text: Spain

text: subsurface metagenome

text: subsurface metagenome

text: Sample T4


text: IMEDEA

text: public

characteristic: collection date

text: subsurface water

text: Spain

text: subsurface metagenome

text: subsurface metagenome

text: Sample T5


text: public

tag: Namespace:Institute for Chemistry and Biology of the Marine Environment

text: 16S rRNA amplicon sequnicing

characteristic: description

text: Germany

text: 53.75970051, 7.717658332

text: salt marsh metagenome

text: salt marsh metagenome


text: Institute for Chemistry and Biology of the Marine Environment

text: public

text: 16S rRNA amplicon sequnicing

text: Germany

characteristic: geographic location (country and/or sea)

text: 53.75956037, 7.716755617

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.75981508, 7.715607552

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.75842165, 7.720915569

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.75874119, 7.719119836

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.75920507, 7.719020467

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.75971551, 7.717687911

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.75957867, 7.716782212

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.75984101, 7.715652877

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.75843454, 7.720941724

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.75922353, 7.719060104

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.75968597, 7.717628588

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.75954603, 7.716730266

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.75979908, 7.715587106

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.75840802, 7.720886707

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.75872608, 7.719084648

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.75919508, 7.718996349

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.762199, 7.7228

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.76216156, 7.722523634

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.762271, 7.72236

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.761983, 7.72272

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.76199642, 7.722497851

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.762026, 7.72229

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.7626241, 7.722896975

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.76264435, 7.722700432

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.76266697, 7.722446775

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.7550308, 7.71611

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.75677067, 7.71577

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.75976583, 7.71516

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 16S rRNA amplicon sequnicing

text: Germany

text: 53.7619302, 7.71609

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.75970051, 7.717658332

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.75956037, 7.716755617

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.75981508, 7.715607552

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.75842165, 7.720915569

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.75874119, 7.719119836

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.75920507, 7.719020467

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.75971551, 7.717687911

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.75957867, 7.716782212

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.75984101, 7.715652877

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.75843454, 7.720941724

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.75922353, 7.719060104

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.75968597, 7.717628588

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.75954603, 7.716730266

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.75979908, 7.715587106

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.75840802, 7.720886707

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.75872608, 7.719084648

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.75919508, 7.718996349

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.762088, 7.72344

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.762199, 7.7228

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.76216156, 7.722523634

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.761983, 7.72272

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.76199642, 7.722497851

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.762026, 7.72229

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.7626241, 7.722896975

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.76264435, 7.722700432

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.76266697, 7.722446775

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.762271, 7.72236

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.75677067, 7.71577

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.75976583, 7.71516

text: salt marsh metagenome

text: salt marsh metagenome


text: public

text: 18S rRNA amplicon sequnicing

text: Germany

text: 53.7619302, 7.71609

text: salt marsh metagenome

text: salt marsh metagenome


text: University of Tartu, Estonia

text: public

text: ena-upload-cli v0.6.1 @ Galaxy

tag: Namespace:University of Tartu, Estonia

text: University of Tartu KoroGenoEST3 consortium, Estonia

characteristic: collecting institution

text: Aare Abroi, Radko Avi, Taavi Päll, Heiki Niglas , Merit Pauskar, Arina Shablinskaja, Eveli Kallas, Andrio Lahesaare, Kai Truusalu, Dagmar Hoidmets, Olga Sadikova, Kaspar Ratnik, Hanna Sepp, Liidia Dotsenko, Jevgenia Epštein, Heleene Suija, Katrin Kaarna, Lili Milani, Mait Metspalu, Ott Eric Oopkaup, Ivar Koppel, Erik Jaaniso, Ivan Kuzmin, Uku Raudvere, Tuuli Reisberg, Hedi Peterson, Ulvi Gerst Talas, Paul Naaber, Mari-Anne Härma, Irja Lutsar, Kristi Huik, Diana Pilvar

characteristic: collector name

text: Nasopharyngeal/oropharyngeal swab from Estonian Covid-19 patient

text: Estonia

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: PCR tiled amplicon WGS of SARS-Cov-2, pre-selected subset from active surveillance


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) metagenome-assembled genome assembled from the metagenomic run SRR5395368 of study SRP102724.

text: saliva

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: Capnocytophaga leadbetteri

characteristic: organism

text: salivary metagenomic in Chinese Children

characteristic: project name

characteristic: sample derived from

text: Capnocytophaga leadbetteri

text: Illumina HiSeq 2500

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Capnocytophaga;s__Capnocytophaga leadbetteri

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: SRR5395368_bin.11_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: collection date

characteristic: common name

text: CheckM

characteristic: description

text: saliva

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: uncultured Eubacteriales bacterium

text: uncultured Eubacteriales bacterium

text: Illumina HiSeq 2500

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Eubacteriales;f__;g__;s__

text: multi-marker approach

text: Metagenome-Assembled Genome: SRR5395368_bin.15_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MetaWRAP v1.3

text: human digestive system

text: EBI-EMG

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: saliva

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: uncultured Porphyromonas sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Porphyromonas sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__Porphyromonas;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: SRR5395368_bin.18_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: collection date

characteristic: common name

text: CheckM

characteristic: description

text: saliva

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: Fusobacterium nucleatum

text: Fusobacterium nucleatum

text: Illumina HiSeq 2500

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium;s__Fusobacterium nucleatum

text: multi-marker approach

text: Metagenome-Assembled Genome: SRR5395368_bin.25_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MetaWRAP v1.3

text: human digestive system

text: EBI-EMG

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: saliva

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: uncultured Selenomonas sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Selenomonas sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Selenomonas;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: SRR5395368_bin.26_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: collection date

characteristic: common name

text: CheckM

characteristic: description

text: saliva

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: uncultured Prevotella sp.

text: uncultured Prevotella sp.

text: Illumina HiSeq 2500

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__

text: multi-marker approach

text: Metagenome-Assembled Genome: SRR5395368_bin.28_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MetaWRAP v1.3

text: human digestive system

text: EBI-EMG

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: saliva

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: Actinomyces gerencseriae

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Actinomyces gerencseriae

text: Illumina HiSeq 2500

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Actinobacteria;c__Actinomycetia;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces gerencseriae

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: SRR5395368_bin.4_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: collection date

characteristic: common name

text: CheckM

text: This sample represents a Third Party Annotation (TPA) metagenome-assembled genome assembled from the metagenomic run SRR5395369 of study SRP102724.

characteristic: description

text: saliva

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: Haemophilus paraphrohaemolyticus

text: Haemophilus paraphrohaemolyticus

text: Illumina HiSeq 2500

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Haemophilus;s__Haemophilus paraphrohaemolyticus

text: multi-marker approach

text: Metagenome-Assembled Genome: SRR5395369_bin.24_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MetaWRAP v1.3

text: human digestive system

text: EBI-EMG

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: saliva

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: uncultured Capnocytophaga sp.

characteristic: organism

text: salivary metagenomic in Chinese Children

characteristic: project name

characteristic: sample derived from

text: uncultured Capnocytophaga sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Capnocytophaga;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: SRR5395369_bin.28_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: collection date

characteristic: common name

text: CheckM

characteristic: description

text: saliva

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: Veillonella parvula

text: Veillonella parvula

text: Illumina HiSeq 2500

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Veillonella;s__Veillonella parvula

text: multi-marker approach

text: Metagenome-Assembled Genome: SRR5395369_bin.34_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MetaWRAP v1.3

text: human digestive system

text: EBI-EMG

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: saliva

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: Streptococcus intermedius

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Streptococcus intermedius

text: Illumina HiSeq 2500

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus intermedius

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: SRR5395369_bin.4_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: collection date

characteristic: common name

text: CheckM

characteristic: description

text: saliva

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: uncultured Porphyromonas sp.

text: uncultured Porphyromonas sp.

text: Illumina HiSeq 2500

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__Porphyromonas;s__

text: multi-marker approach

text: Metagenome-Assembled Genome: SRR5395369_bin.5_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MetaWRAP v1.3

text: human digestive system

text: EBI-EMG

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: saliva

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: uncultured Capnocytophaga sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Capnocytophaga sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: SRR5395369_bin.7_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: collection date

characteristic: common name

text: CheckM

characteristic: description

text: saliva

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: uncultured Flavobacteriaceae bacterium

text: uncultured Flavobacteriaceae bacterium

text: Illumina HiSeq 2500

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__;s__

text: multi-marker approach

text: Metagenome-Assembled Genome: SRR5395369_bin.8_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes v3.15.3

text: MetaWRAP v1.3

text: human digestive system

text: EBI-EMG

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) metagenome-assembled genome assembled from the metagenomic run SRR5395371 of study SRP102724.

text: saliva

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: Kingella denitrificans

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Kingella denitrificans

text: Illumina HiSeq 2500

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Kingella;s__Kingella denitrificans

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: SRR5395371_bin.4_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: collection date

characteristic: common name

text: CheckM

characteristic: description

text: saliva

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: uncultured Porphyromonadaceae bacterium

text: uncultured Porphyromonadaceae bacterium

text: Illumina HiSeq 2500

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__;s__

text: multi-marker approach

text: Metagenome-Assembled Genome: SRR5395371_bin.8_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MetaWRAP v1.3

text: human digestive system

text: EBI-EMG

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: saliva

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: uncultured Granulicatella sp.

characteristic: organism

text: salivary metagenomic in Chinese Children

characteristic: project name

characteristic: sample derived from

text: uncultured Granulicatella sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Granulicatella;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: SRR5395371_bin.9_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: collection date

characteristic: common name

text: CheckM

text: This sample represents a Third Party Annotation (TPA) metagenome-assembled genome assembled from the metagenomic run SRR5395372 of study SRP102724.

characteristic: description

text: saliva

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: uncultured Rothia sp.

text: uncultured Rothia sp.

text: Illumina HiSeq 2500

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Actinobacteria;c__Actinomycetia;o__Micrococcales;f__Micrococcaceae;g__Rothia;s__

text: multi-marker approach

text: Metagenome-Assembled Genome: SRR5395372_bin.8_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MetaWRAP v1.3

text: human digestive system

text: EBI-EMG

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) metagenome-assembled genome assembled from the metagenomic run SRR5395373 of study SRP102724.

text: saliva

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: uncultured Corynebacterium sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Corynebacterium sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Actinobacteria;c__Actinomycetia;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: SRR5395373_bin.1_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: collection date

characteristic: common name

text: CheckM

characteristic: description

text: saliva

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: Rothia mucilaginosa

text: Rothia mucilaginosa

text: Illumina HiSeq 2500

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Actinobacteria;c__Actinomycetia;o__Micrococcales;f__Micrococcaceae;g__Rothia;s__Rothia mucilaginosa

text: multi-marker approach

text: Metagenome-Assembled Genome: SRR5395373_bin.11_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes v3.15.3

text: MetaWRAP v1.3

text: human digestive system

text: EBI-EMG

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: saliva

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: uncultured Capnocytophaga sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Capnocytophaga sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Capnocytophaga;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: SRR5395373_bin.12_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: collection date

characteristic: common name

text: CheckM

characteristic: description

text: saliva

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: uncultured Candidatus Saccharibacteria bacterium

text: Illumina HiSeq 2500

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Candidatus Saccharibacteria;c__Candidatus Saccharimonia;o__Candidatus Nanosynbacterales;f__Candidatus Nanosynbacteraceae;g__Candidatus Nanosynbacter;s__

text: multi-marker approach

text: Metagenome-Assembled Genome: SRR5395373_bin.6_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MetaWRAP v1.3

text: human digestive system

text: EBI-EMG

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) metagenome-assembled genome assembled from the metagenomic run SRR5395374 of study SRP102724.

text: saliva

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: uncultured Neisseria sp.

characteristic: organism

text: salivary metagenomic in Chinese Children

characteristic: project name

characteristic: sample derived from

text: uncultured Neisseria sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Neisseria;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: SRR5395374_bin.13_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: collection date

characteristic: common name

text: CheckM

characteristic: description

text: saliva

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: uncultured Rothia sp.

text: uncultured Rothia sp.

text: Illumina HiSeq 2500

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Actinobacteria;c__Actinomycetia;o__Micrococcales;f__Micrococcaceae;g__Rothia;s__

text: multi-marker approach

text: Metagenome-Assembled Genome: SRR5395374_bin.25_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MetaWRAP v1.3

text: human digestive system

text: EBI-EMG

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: saliva

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: Kingella denitrificans

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Kingella denitrificans

text: Illumina HiSeq 2500

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Kingella;s__Kingella denitrificans

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: SRR5395374_bin.3_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: collection date

characteristic: common name

text: CheckM

characteristic: description

text: saliva

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: Capnocytophaga leadbetteri

text: Capnocytophaga leadbetteri

text: Illumina HiSeq 2500

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Capnocytophaga;s__Capnocytophaga leadbetteri

text: multi-marker approach

text: Metagenome-Assembled Genome: SRR5395374_bin.9_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes v3.15.3

text: MetaWRAP v1.3

text: human digestive system

text: EBI-EMG

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) metagenome-assembled genome assembled from the metagenomic run SRR5395375 of study SRP102724.

text: saliva

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: uncultured Actinomyces sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Actinomyces sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Actinobacteria;c__Actinomycetia;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: SRR5395375_bin.13_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: collection date

characteristic: common name

text: CheckM

characteristic: description

text: saliva

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: Capnocytophaga leadbetteri

text: Capnocytophaga leadbetteri

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-Assembled Genome: SRR5395375_bin.19_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MetaWRAP v1.3

text: human digestive system

text: EBI-EMG

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: saliva

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: Haemophilus parainfluenzae

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Haemophilus parainfluenzae

text: Illumina HiSeq 2500

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Haemophilus;s__Haemophilus parainfluenzae

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: SRR5395375_bin.23_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: collection date

characteristic: common name

text: CheckM

characteristic: description

text: saliva

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: uncultured Streptococcus sp.

text: salivary metagenomic in Chinese Children

text: uncultured Streptococcus sp.

text: Illumina HiSeq 2500

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__

text: multi-marker approach

text: Metagenome-Assembled Genome: SRR5395375_bin.26_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MetaWRAP v1.3

text: human digestive system

text: EBI-EMG

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: saliva

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: Lautropia mirabilis

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Lautropia mirabilis

text: Illumina HiSeq 2500

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Lautropia;s__Lautropia mirabilis

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: SRR5395375_bin.28_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: collection date

characteristic: common name

text: CheckM

characteristic: description

text: saliva

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: uncultured Capnocytophaga sp.

text: uncultured Capnocytophaga sp.

text: Illumina HiSeq 2500

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Capnocytophaga;s__

text: multi-marker approach

text: Metagenome-Assembled Genome: SRR5395375_bin.4_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MetaWRAP v1.3

text: human digestive system

text: EBI-EMG

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: saliva

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: Campylobacter concisus

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Campylobacter concisus

text: Illumina HiSeq 2500

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter concisus

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: SRR5395375_bin.6_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: collection date

characteristic: common name

text: CheckM

characteristic: description

text: saliva

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: Aggregatibacter aphrophilus

text: Aggregatibacter aphrophilus

text: Illumina HiSeq 2500

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Aggregatibacter;s__Aggregatibacter aphrophilus

text: multi-marker approach

text: Metagenome-Assembled Genome: SRR5395375_bin.7_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MetaWRAP v1.3

text: human digestive system

text: EBI-EMG

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) metagenome-assembled genome assembled from the metagenomic run SRR5395375 of study SRP102724.

text: saliva

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: uncultured Granulicatella sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Granulicatella sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Granulicatella;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: SRR5395375_bin.8_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: collection date

characteristic: common name

text: CheckM

characteristic: description

text: saliva

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: uncultured Aggregatibacter sp.

text: uncultured Aggregatibacter sp.

text: Illumina HiSeq 2500

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Aggregatibacter;s__

text: multi-marker approach

text: Metagenome-Assembled Genome: SRR5395375_bin.9_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MetaWRAP v1.3

text: human digestive system

text: EBI-EMG

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) metagenome-assembled genome assembled from the metagenomic run SRR5395376 of study SRP102724.

text: saliva

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: uncultured Actinomyces sp.

characteristic: organism

text: salivary metagenomic in Chinese Children

characteristic: project name

characteristic: sample derived from

text: uncultured Actinomyces sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Actinobacteria;c__Actinomycetia;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: SRR5395376_bin.14_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: collection date

characteristic: common name

text: CheckM

characteristic: description

text: saliva

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: uncultured Veillonella sp.

text: uncultured Veillonella sp.

text: Illumina HiSeq 2500

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Veillonella;s__

text: multi-marker approach

text: Metagenome-Assembled Genome: SRR5395376_bin.15_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MetaWRAP v1.3

text: human digestive system

text: EBI-EMG

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: saliva

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__;c__;o__;f__;g__;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: SRR5395376_bin.19_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: collection date

characteristic: common name

text: CheckM

characteristic: description

text: saliva

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: uncultured Neisseria sp.

text: uncultured Neisseria sp.

text: Illumina HiSeq 2500

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Neisseria;s__

text: multi-marker approach

text: Metagenome-Assembled Genome: SRR5395376_bin.5_MetaWRAP_v1.3_MAG


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MetaWRAP v1.3

text: human digestive system

text: EBI-EMG

text: not provided

characteristic: completeness score

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: saliva

characteristic: environmental medium

text: not provided

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: oral metagenome

text: oral cavity

characteristic: local environmental context

text: oral metagenome

characteristic: metagenomic source

text: uncultured Porphyromonas sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured Porphyromonas sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__Porphyromonas;s__

characteristic: taxonomic classification

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-Assembled Genome: SRR5395376_bin.6_MetaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: MetaWRAP v1.3

characteristic: binning software

text: human digestive system

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: collection date

characteristic: common name

text: CheckM

text: This sample represents a Third Party Annotation (TPA) metagenome-assembled genome assembled from the metagenomic run SRR5395377 of study SRP102724.

characteristic: description

text: saliva

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: metagenome-assembled genome

text: oral metagenome

text: oral cavity

text: oral metagenome

text: Campylobacter rectus

text: Campylobacter rectus

text: Illumina HiSeq 2500

text: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter rectus

text: multi-marker approach

text: Metagenome-Assembled Genome: SRR5395377_bin.10_MetaWRAP_v1.3_MAG