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text: RELECOV

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characteristic: collector name

text: Human--Nasopharynx--Aspiration

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

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text: Homo sapiens

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tag: attribute

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characteristic: authors

text: RELECOV

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text: Hospital Universitario de Guadalajara

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characteristic: description

text: not applicable

characteristic: geographic location (country and/or sea)

text: Dinoroseobacter shibae

text: Dinoroseobacter shibae

text: D. shubae WT_1


characteristic: ENA-LAST-UPDATE

text: Technical University Braunschweig

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ena-SAMPLE-TAB-29-10-2023-13:19:23:014-1955

text: DNA isolated from D.shibae WT OMVs

text: not applicable

text: Dinoroseobacter shibae

text: Dinoroseobacter shibae

text: D. shubae WT_3


characteristic: External Id

characteristic: INSDC center name

text: public

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: VS

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2231029983/2023

text: active surveillance not initiated by an outbreak


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN17989/2023

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

characteristic: broker name

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collecting institution

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN17995/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: University Hospital Basel

text: public

characteristic: INSDC status

text: SIB

text: Clinical Virology, University Hospital Basel, Basel, Switzerland

text: Yi-Wen Lim, Pascal Schläpfer, Rainer Gosert, Klaudia Nägele, Svenia Schmid, Karoline Leuzinger

characteristic: collector name

text: Switzerland

text: BS

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/BS-UHB-USB_2023_10_23_1b3ddea0/2023


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University Hospital Basel

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: Switzerland

text: BS

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BS-UHB-USB_2023_10_23_03fb1502/2023

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: University Hospital Basel

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BS

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BS-UHB-USB_2023_10_23_961e52fa/2023


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Laboratory of genomics and metagenomics, Institute of Microbiology, University Hospital Centre and University of Lausanne, Switzerland

text: public

characteristic: INSDC status

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

text: Trestan Pillonel, Damien Jacot, Sébastien Aeby, Gilbert Greub, Claire Bertelli

characteristic: collector name

text: Switzerland

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN18033/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: CHUV, CH-1011 Lausanne, Switzerland

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN17996/2023

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute of Medical Virology, Zürich, Switzerland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

characteristic: broker name

text: Universität Zürich, Zürich, Switzerland

characteristic: collecting institution

characteristic: collection date

text: Verena Kufner, Maryam Zaheri, Stefan Schmutz, Kevin Steiner, Annette Audigé, Guido Bloemberg, Michael Huber, Alexandra Trkola

text: Switzerland

characteristic: geographic location (country and/or sea)

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6b9fc/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: INSDC status

tag: Namespace:Instituto de Investigacion Biosanitaria del Principado de Asturias (ISPA)

text: house mouse

characteristic: common name

characteristic: description

text: Spain

text: Mus musculus

text: Mus musculus

text: Male

characteristic: sex

characteristic: strain


text: MPI FOR DEVELOPMENTAL BIOLOGY

text: public

characteristic: SRA accession

tag: Namespace:MPI FOR DEVELOPMENTAL BIOLOGY

characteristic: Submitter Id

text: Slovakia

text: Arabidopsis arenosa

characteristic: organism

text: Arabidopsis arenosa

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:Regional Virus Laboratory, Belfast Health and Social Care Trust; and: Genomics Core Technology Unit, Queens University Belfast.

text: COVID-19 Genomics UK Consortium

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: active surveillance in response to outbreak

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Regional Virus Laboratory, Belfast Health and Social Care Trust; and: Genomics Core Technology Unit, Queens University Belfast.

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

text: not provided

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

text: not provided

characteristic: title

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:Respiratory Virus Unit, Microbiology Services Colindale, Public Health England

text: COVID-19 Genomics UK Consortium

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: receipt date

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Respiratory Virus Unit, Microbiology Services Colindale, Public Health England

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:Originating lab: Wales Specialist Virology Centre Sequencing lab: Pathogen Genomics Unit

text: COVID-19 Genomics UK Consortium

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: organism

text: not provided

characteristic: title

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Originating lab: Wales Specialist Virology Centre Sequencing lab: Pathogen Genomics Unit

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

text: not provided

text: United Kingdom

text: Wales

text: not provided

text: not provided

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

text: COVID-19 Genomics UK Consortium

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Scotland

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

text: not provided

text: not provided

text: United Kingdom

text: Scotland

text: not provided

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: organism

text: not provided

characteristic: title

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIBE-IG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: collection date

text: dog

characteristic: common name

text: Foxterrier

characteristic: description

text: Switzerland

characteristic: geographic location (country and/or sea)

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Foxterrier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Tree of Life Programme

text: MICHAEL METZGER | ERIC SPARKMAN

text: PACIFIC NORTHWEST RESEARCH INSTITUTE | SQUAXIN ISLAND TRIBE

text: USA

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Washington State | Squaxin Island

characteristic: geographic location (region and locality)

text: intertidal zone

characteristic: habitat

text: MICHAEL METZGER | ERIC SPARKMAN

text: adult

characteristic: lifestage

text: Clinocardium nuttallii

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

characteristic: project name

text: Clinocardium nuttallii

text: NOT PROVIDED

characteristic: sex

text: NOT COLLECTED

text: N

characteristic: symbiont

characteristic: tolid


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: MICHAEL METZGER | ERIC SPARKMAN

characteristic: collecting institution

characteristic: collection date

text: USA

text: Washington State | Squaxin Island

text: intertidal zone

text: MICHAEL METZGER | ERIC SPARKMAN

text: adult

text: Clinocardium nuttallii

characteristic: organism

text: **OTHER SOMATIC ANIMAL TISSUE**

characteristic: sample derived from

text: Clinocardium nuttallii

text: NOT PROVIDED

text: NOT COLLECTED

text: N

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Sanger Institute

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: MICHAEL METZGER | ERIC SPARKMAN

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Washington State | Squaxin Island

characteristic: geographic location (region and locality)

text: intertidal zone

characteristic: habitat

text: MICHAEL METZGER | ERIC SPARKMAN

text: adult

characteristic: lifestage

text: Clinocardium nuttallii

text: MOLLUSC FOOT

text: Clinocardium nuttallii

text: NOT PROVIDED

text: NOT COLLECTED

text: N


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: MICHAEL METZGER | ERIC SPARKMAN

text: USA

text: Washington State | Squaxin Island

text: intertidal zone

text: MICHAEL METZGER | ERIC SPARKMAN

text: adult

text: Clinocardium nuttallii

text: MUSCLE

characteristic: organism part

characteristic: project name

text: Clinocardium nuttallii

text: NOT PROVIDED

characteristic: sex

text: NOT COLLECTED

text: N

characteristic: symbiont

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Sanger Institute

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: MICHAEL METZGER | ERIC SPARKMAN

characteristic: collecting institution

characteristic: collection date

text: USA

characteristic: geographic location (country and/or sea)

text: Washington State | Squaxin Island

text: intertidal zone

text: MICHAEL METZGER | ERIC SPARKMAN

text: adult

text: Clinocardium nuttallii

characteristic: organism

text: GILL ANIMAL

characteristic: sample derived from

text: Clinocardium nuttallii

text: NOT PROVIDED

text: NOT COLLECTED

text: N

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: MICHAEL METZGER | ERIC SPARKMAN

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Washington State | Squaxin Island

characteristic: geographic location (region and locality)

text: intertidal zone

characteristic: habitat

text: MICHAEL METZGER | ERIC SPARKMAN

text: adult

characteristic: lifestage

text: Clinocardium nuttallii

text: GONAD

text: Clinocardium nuttallii

text: NOT PROVIDED

text: NOT COLLECTED

text: N


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: GLORIA ARRIAGADA

text: UNIVERSIDAD ANDRES BELLO

characteristic: collecting institution

text: Chile

text: REGION METROPOLITANA | SANTIAGO | UNIVERSIDAD ANDRES BELLO | INSTITUTO DE CIENCIAS BIOMEDICA | LABORATORIO DE VIROLOGIA

text: MUSSEL BED

text: GLORIA ARRIAGADA

text: UNIVERSIDAD ANDRES BELLO

text: adult

text: Mytilus chilensis

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

characteristic: project name

text: Mytilus chilensis

text: NOT COLLECTED

characteristic: sex

text: NOT PROVIDED

text: N

characteristic: symbiont

characteristic: tolid


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: GLORIA ARRIAGADA

text: UNIVERSIDAD ANDRES BELLO

characteristic: collection date

text: Chile

characteristic: geographic location (country and/or sea)

text: MUSSEL BED

text: GLORIA ARRIAGADA

text: UNIVERSIDAD ANDRES BELLO

text: adult

text: Mytilus chilensis

characteristic: organism

text: GILL ANIMAL

characteristic: sample derived from

text: Mytilus chilensis

text: NOT COLLECTED

text: NOT PROVIDED

text: N

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Sanger Institute

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: GLORIA ARRIAGADA

text: UNIVERSIDAD ANDRES BELLO

characteristic: collecting institution

text: Chile

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: MUSSEL BED

characteristic: habitat

text: GLORIA ARRIAGADA

text: UNIVERSIDAD ANDRES BELLO

text: adult

characteristic: lifestage

text: Mytilus chilensis

text: **OTHER SOMATIC ANIMAL TISSUE**

text: Mytilus chilensis

text: NOT COLLECTED

text: NOT PROVIDED

text: N


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: GLORIA ARRIAGADA

text: UNIVERSIDAD ANDRES BELLO

text: Chile

text: MUSSEL BED

text: GLORIA ARRIAGADA

text: UNIVERSIDAD ANDRES BELLO

text: adult

text: Mytilus chilensis

text: MUSCLE

characteristic: organism part

characteristic: project name

text: Mytilus chilensis

text: NOT COLLECTED

characteristic: sex

text: NOT PROVIDED

text: N

characteristic: symbiont

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Sanger Institute

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: GLORIA ARRIAGADA

text: UNIVERSIDAD ANDRES BELLO

characteristic: collecting institution

characteristic: collection date

text: Chile

characteristic: geographic location (country and/or sea)

text: MUSSEL BED

text: GLORIA ARRIAGADA

text: UNIVERSIDAD ANDRES BELLO

text: adult

text: Mytilus chilensis

characteristic: organism

text: MOLLUSC FOOT

characteristic: sample derived from

text: Mytilus chilensis

text: NOT COLLECTED

text: NOT PROVIDED

text: N

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MPI FOR DEVELOPMENTAL BIOLOGY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Slovakia

text: Arabidopsis arenosa

text: Arabidopsis arenosa


characteristic: ENA-CHECKLIST

text: GHENT UNIVERSITY

text: public

tag: Namespace:GHENT UNIVERSITY

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 0; Donor 1; Faecal sample; Faecal sample; Day 0

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 0; Donor 1; FS; FS; Day 0


tag: attribute

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Digestive tract environment

characteristic: collection date

text: Sample number 102; Donor 2; Short SHIME transit; Proximal colon; Day 4

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 102; Donor 2; ST; P; Day 4

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 301; Donor 4; Short SHIME transit; Proximal colon; Day 1

characteristic: description

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 301; Donor 4; ST; P; Day 1


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 302; Donor 4; Short SHIME transit; Distal colon; Day 1

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 302; Donor 4; ST; D; Day 1


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Digestive tract environment

characteristic: collection date

text: Sample number 303; Donor 4; Medium SHIME transit; Proximal colon; Day 1

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 303; Donor 4; MT; P; Day 1

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 304; Donor 4; Medium SHIME transit; Distal colon; Day 1

characteristic: description

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 304; Donor 4; MT; D; Day 1


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 305; Donor 4; Long SHIME transit; Proximal colon; Day 1

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 305; Donor 4; LT; P; Day 1


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Digestive tract environment

characteristic: collection date

text: Sample number 306; Donor 4; Long SHIME transit; Distal colon; Day 1

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 306; Donor 4; LT; D; Day 1

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 31; Donor 1; Short SHIME transit; Proximal colon; Day 6

characteristic: description

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 31; Donor 1; ST; P; Day 6


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 313; Donor 4; Short SHIME transit; Proximal colon; Day 3

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 313; Donor 4; ST; P; Day 3


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Digestive tract environment

characteristic: collection date

text: Sample number 319; Donor 4; Short SHIME transit; Proximal colon; Day 4

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 319; Donor 4; ST; P; Day 4

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 32; Donor 1; Short SHIME transit; Distal colon; Day 6

characteristic: description

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 32; Donor 1; ST; D; Day 6


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 320; Donor 4; Short SHIME transit; Distal colon; Day 4

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 320; Donor 4; ST; D; Day 4


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Digestive tract environment

characteristic: collection date

text: Sample number 321; Donor 4; Medium SHIME transit; Proximal colon; Day 4

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 321; Donor 4; MT; P; Day 4

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 331; Donor 4; Short SHIME transit; Proximal colon; Day 6

characteristic: description

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 331; Donor 4; ST; P; Day 6


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 332; Donor 4; Short SHIME transit; Distal colon; Day 6

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 332; Donor 4; ST; D; Day 6


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Digestive tract environment

characteristic: collection date

text: Sample number 334; Donor 4; Medium SHIME transit; Distal colon; Day 6

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 334; Donor 4; MT; D; Day 6

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 335; Donor 4; Long SHIME transit; Proximal colon; Day 6

characteristic: description

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 335; Donor 4; LT; P; Day 6


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 337; Donor 4; Short SHIME transit; Proximal colon; Day 7

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 337; Donor 4; ST; P; Day 7


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Digestive tract environment

characteristic: collection date

text: Sample number 338; Donor 4; Short SHIME transit; Distal colon; Day 7

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 338; Donor 4; ST; D; Day 7

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 339; Donor 4; Medium SHIME transit; Proximal colon; Day 7

characteristic: description

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 339; Donor 4; MT; P; Day 7


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 34; Donor 1; Medium SHIME transit; Distal colon; Day 6

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 34; Donor 1; MT; D; Day 6


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Digestive tract environment

characteristic: collection date

text: Sample number 343; Donor 4; Short SHIME transit; Proximal colon; Day 8

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 343; Donor 4; ST; P; Day 8

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 344; Donor 4; Short SHIME transit; Distal colon; Day 8

characteristic: description

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 344; Donor 4; ST; D; Day 8


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 349; Donor 4; Short SHIME transit; Proximal colon; Day 9

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 349; Donor 4; ST; P; Day 9


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Digestive tract environment

characteristic: collection date

text: Sample number 49; Donor 1; Short SHIME transit; Proximal colon; Day 9

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 49; Donor 1; ST; P; Day 9

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 490; Donor 5; Long SHIME transit; Distal colon; Day 20

characteristic: description

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 490; Donor 5; LT; D; Day 20


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 5; Donor 1; Long SHIME transit; Proximal colon; Day 1

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 5; Donor 1; LT; P; Day 1


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Digestive tract environment

characteristic: collection date

text: Sample number 50; Donor 1; Short SHIME transit; Distal colon; Day 9

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 50; Donor 1; ST; D; Day 9

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 500; Donor 6; Faecal sample; Faecal sample; Day 0

characteristic: description

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 500; Donor 6; FS; FS; Day 0


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 501; Donor 6; Short SHIME transit; Proximal colon; Day 1

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 501; Donor 6; ST; P; Day 1


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Digestive tract environment

characteristic: collection date

text: Sample number 502; Donor 6; Short SHIME transit; Distal colon; Day 1

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 502; Donor 6; ST; D; Day 1

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 503; Donor 6; Medium SHIME transit; Proximal colon; Day 1

characteristic: description

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 503; Donor 6; MT; P; Day 1


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 504; Donor 6; Medium SHIME transit; Distal colon; Day 1

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 504; Donor 6; MT; D; Day 1


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Digestive tract environment

characteristic: collection date

text: Sample number 519; Donor 6; Short SHIME transit; Proximal colon; Day 4

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 519; Donor 6; ST; P; Day 4

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 520; Donor 6; Short SHIME transit; Distal colon; Day 4

characteristic: description

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 520; Donor 6; ST; D; Day 4


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 521; Donor 6; Medium SHIME transit; Proximal colon; Day 4

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 521; Donor 6; MT; P; Day 4


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Digestive tract environment

characteristic: collection date

text: Sample number 532; Donor 6; Short SHIME transit; Distal colon; Day 6

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 532; Donor 6; ST; D; Day 6

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 535; Donor 6; Long SHIME transit; Proximal colon; Day 6

characteristic: description

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 535; Donor 6; LT; P; Day 6


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 537; Donor 6; Short SHIME transit; Proximal colon; Day 7

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 537; Donor 6; ST; P; Day 7


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Digestive tract environment

characteristic: collection date

text: Sample number 538; Donor 6; Short SHIME transit; Distal colon; Day 7

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 538; Donor 6; ST; D; Day 7

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 539; Donor 6; Medium SHIME transit; Proximal colon; Day 7

characteristic: description

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 539; Donor 6; MT; P; Day 7


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 54; Donor 1; Long SHIME transit; Distal colon; Day 9

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 54; Donor 1; LT; D; Day 9


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Digestive tract environment

characteristic: collection date

text: Sample number 543; Donor 6; Short SHIME transit; Proximal colon; Day 8

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 543; Donor 6; ST; P; Day 8

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 55; Donor 1; Short SHIME transit; Proximal colon; Day 10

characteristic: description

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 55; Donor 1; ST; P; Day 10


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 554; Donor 6; Long SHIME transit; Distal colon; Day 9

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 554; Donor 6; LT; D; Day 9


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Digestive tract environment

characteristic: collection date

text: Sample number 555; Donor 6; Short SHIME transit; Proximal colon; Day 10

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 555; Donor 6; ST; P; Day 10

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 556; Donor 6; Short SHIME transit; Distal colon; Day 10

characteristic: description

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 556; Donor 6; ST; D; Day 10


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 559; Donor 6; Long SHIME transit; Proximal colon; Day 10

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 559; Donor 6; LT; P; Day 10


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Digestive tract environment

characteristic: collection date

text: Sample number 56; Donor 1; Short SHIME transit; Distal colon; Day 10

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 56; Donor 1; ST; D; Day 10

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 561; Donor 6; Medium SHIME transit; Proximal colon; Day 11

characteristic: description

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 561; Donor 6; MT; P; Day 11


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 566; Donor 6; Medium SHIME transit; Distal colon; Day 12

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 566; Donor 6; MT; D; Day 12


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Digestive tract environment

characteristic: collection date

text: Sample number 569; Donor 6; Medium SHIME transit; Proximal colon; Day 13

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 569; Donor 6; MT; P; Day 13

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 570; Donor 6; Medium SHIME transit; Distal colon; Day 13

characteristic: description

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 570; Donor 6; MT; D; Day 13


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 573; Donor 6; Medium SHIME transit; Proximal colon; Day 14

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 573; Donor 6; MT; P; Day 14


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Digestive tract environment

characteristic: collection date

text: Sample number 581; Donor 6; Long SHIME transit; Proximal colon; Day 16

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 581; Donor 6; LT; P; Day 16

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 582; Donor 6; Long SHIME transit; Distal colon; Day 16

characteristic: description

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 582; Donor 6; LT; D; Day 16


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 583; Donor 6; Long SHIME transit; Proximal colon; Day 17

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 583; Donor 6; LT; P; Day 17


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Digestive tract environment

characteristic: collection date

text: Sample number 584; Donor 6; Long SHIME transit; Distal colon; Day 17

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 584; Donor 6; LT; D; Day 17

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 588; Donor 6; Long SHIME transit; Distal colon; Day 19

characteristic: description

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 588; Donor 6; LT; D; Day 19


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 589; Donor 6; Long SHIME transit; Proximal colon; Day 20

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 589; Donor 6; LT; P; Day 20


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Digestive tract environment

characteristic: collection date

text: Sample number 59; Donor 1; Long SHIME transit; Proximal colon; Day 10

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 59; Donor 1; LT; P; Day 10

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 590; Donor 6; Long SHIME transit; Distal colon; Day 20

characteristic: description

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 590; Donor 6; LT; D; Day 20


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 6; Donor 1; Long SHIME transit; Distal colon; Day 1

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 6; Donor 1; LT; D; Day 1


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Digestive tract environment

characteristic: collection date

text: Sample number 61; Donor 1; Medium SHIME transit; Proximal colon; Day 11

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 61; Donor 1; MT; P; Day 11

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 62; Donor 1; Medium SHIME transit; Distal colon; Day 11

characteristic: description

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 62; Donor 1; MT; D; Day 11


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 65; Donor 1; Medium SHIME transit; Proximal colon; Day 12

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 65; Donor 1; MT; P; Day 12


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Digestive tract environment

characteristic: collection date

text: Sample number 73; Donor 1; Medium SHIME transit; Proximal colon; Day 14

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 73; Donor 1; MT; P; Day 14

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: HUG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Laboratoire de virologie, Geneva, Switzerland

characteristic: collecting institution

text: Samuel Cordey, Aline Mamin, Francisco Perez, Ana Rita Goncalves, Laurent Kaiser, Lorenzo Cerutti, Cedric Howald, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

characteristic: collector name

text: Switzerland

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-42846167/2023

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance not initiated by an outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: HUG

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42778304/2023

characteristic: organism

characteristic: title


characteristic: External Id

text: HUG

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: GE

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42829171/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UNL

text: public

text: maize

characteristic: common name

text: leaf maize sample

characteristic: description

text: USA

text: Zea mays subsp. mays

text: Zea mays subsp. mays


A

characteristic: ENA-LAST-UPDATE

text: UNL

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: A

characteristic: collection date

text: maize

text: leaf maize sample

text: USA

text: Zea mays subsp. mays

text: Zea mays subsp. mays

text: A


DKFBHJ

characteristic: External Id

text: UNL

text: public

text: DKFBHJ

text: maize

text: leaf maize sample

text: USA

characteristic: geographic location (country and/or sea)

text: Zea mays subsp. mays

characteristic: organism

text: Zea mays subsp. mays

text: DKFBHJ

characteristic: title


DKMBNA

text: UNL

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: DKMBNA

characteristic: Submitter Id

text: maize

text: leaf maize sample

text: USA

text: Zea mays subsp. mays

text: Zea mays subsp. mays

text: DKMBNA


DKMBUB

text: UNL

text: public

text: DKMBUB

text: maize

text: leaf maize sample

text: USA

text: Zea mays subsp. mays

text: Zea mays subsp. mays

text: DKMBUB


DKMBZA

text: UNL

text: public

text: DKMBZA

text: maize

text: leaf maize sample

text: USA

text: Zea mays subsp. mays

text: Zea mays subsp. mays

text: DKMBZA


FBLA

text: UNL

text: public

text: FBLA

text: maize

text: leaf maize sample

text: USA

text: Zea mays subsp. mays

text: Zea mays subsp. mays

text: FBLA


FBLL

text: UNL

text: public

text: FBLL

text: maize

text: leaf maize sample

text: USA

text: Zea mays subsp. mays

text: Zea mays subsp. mays

text: FBLL


Fe

text: UNL

text: public

text: Fe

text: maize

text: leaf maize sample

text: USA

text: Zea mays subsp. mays

text: Zea mays subsp. mays

text: Fe


Huanyao

text: UNL

text: public

text: Huanyao

text: maize

text: leaf maize sample

text: USA

text: Zea mays subsp. mays

text: Zea mays subsp. mays

text: Huanyao


Huobai

text: UNL

text: public

text: Huobai

text: maize

text: leaf maize sample

text: USA

text: Zea mays subsp. mays

text: Zea mays subsp. mays

text: Huobai


Hy

text: UNL

text: public

text: Hy

text: maize

text: leaf maize sample

text: USA

text: Zea mays subsp. mays

text: Zea mays subsp. mays

text: Hy


MBST

text: UNL

text: public

text: MBST

text: maize

text: leaf maize sample

text: USA

text: Zea mays subsp. mays

text: Zea mays subsp. mays

text: MBST


MBWZ

text: UNL

text: public

text: MBWZ

text: maize

text: leaf maize sample

text: USA

text: Zea mays subsp. mays

text: Zea mays subsp. mays

text: MBWZ


text: HUG

text: public

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-42776770/2023

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HUG

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42745642/2023

characteristic: organism