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text: ileum

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characteristic: ENA-CHECKLIST

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text: public

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text: ena-SAMPLE-TAB-04-07-2022-11:58:51:382-69358

characteristic: Submitter Id

characteristic: adapters

characteristic: cageID

characteristic: collection date

text: mouse BAL31c, ileum sample

characteristic: description

characteristic: environment (biome)

text: ENVO_2100002:intestine environment

characteristic: environment (feature)

text: ENVO_02000026:chyme material

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mouse (Mus musculus)

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characteristic: investigation type

text: equimolar pooling

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text: ena-SAMPLE-TAB-04-07-2022-11:58:51:382-69359

text: fwd:AATGATACGGCGACCACCGAGATCTACACNNNNNNNNTATGGTAATTGT::rev:CAAGCAGAAGACGGCATACGAGATNNNNNNNNAAGTCGAGAGTCAGTCAGCC

text: mouse BAL18c, ileum sample

text: ENVO_2100002:intestine environment

text: ENVO_02000026:chyme material

text: Germany

text: Mouse (Mus musculus)

characteristic: host common name

characteristic: host diet

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characteristic: host growth conditions

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text: ena-SAMPLE-TAB-04-07-2022-11:58:51:382-69360

characteristic: Submitter Id

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characteristic: cageID

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text: mouse BAL21b, ileum sample

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text: ENVO_01001033:digestive tract environment

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text: ENVO_02000026:chyme material

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mouse (Mus musculus)

text: chow diet, rat/mouse maintenance

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text: ena-SAMPLE-TAB-04-07-2022-11:58:51:382-69361

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text: ena-SAMPLE-TAB-04-07-2022-11:58:51:382-69362

characteristic: Submitter Id

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characteristic: cageID

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text: mouse BAL26c, ileum sample

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text: ENVO_2100002:intestine environment

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mouse (Mus musculus)

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text: ena-SAMPLE-TAB-04-07-2022-11:58:51:383-69363

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text: Mouse (Mus musculus)

characteristic: host common name

text: purified diet, AIN93G

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text: ena-SAMPLE-TAB-04-07-2022-11:58:51:383-69364

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text: mouse BAL19a, ileum sample

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characteristic: geographic location (country and/or sea)

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characteristic: geographic location (longitude)

text: Mouse (Mus musculus)

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text: ena-SAMPLE-TAB-04-07-2022-11:58:51:383-69366

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text: mouse BAL24b, ileum sample

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text: ENVO_2100002:intestine environment

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text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mouse (Mus musculus)

text: purified diet, based on AIN93G, 2.25% pectin, 2.25% Synergy1, 10.5% cellulose

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text: ena-SAMPLE-TAB-04-07-2022-11:58:51:383-69367

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characteristic: host common name

text: purified diet, based on AIN93G, 3.75% pectin, 3.75% Synergy1, 7.5% cellulose

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characteristic: geographic location (country and/or sea)

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text: Mouse (Mus musculus)

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text: Germany

text: Mouse (Mus musculus)

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text: chow diet, rat/mouse maintenance

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text: ena-SAMPLE-TAB-04-07-2022-11:58:51:384-69370

characteristic: Submitter Id

text: fwd:AATGATACGGCGACCACCGAGATCTACACNNNNNNNNTATGGTAATTGT::rev:CAAGCAGAAGACGGCATACGAGATNNNNNNNNAAGTCGAGAGTCAGTCAGCC

characteristic: adapters

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text: ENVO_2100002:intestine environment

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characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mouse (Mus musculus)

text: purified diet, based on AIN93G, 5.25% pectin, 5.25% Synergy1, 4.5% cellulose

text: male

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text: Mouse (Mus musculus)

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text: ena-SAMPLE-TAB-04-07-2022-11:58:51:384-69373

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characteristic: environment (material)

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mouse (Mus musculus)

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characteristic: Submitter Id

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text: ENVO_2100002:intestine environment

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characteristic: geographic location (country and/or sea)

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text: ena-SAMPLE-TAB-04-07-2022-11:58:51:385-69377

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text: Germany

text: Mouse (Mus musculus)

characteristic: host common name

text: purified diet, based on AIN93G, 2.25% pectin, 2.25% Synergy1, 10.5% cellulose

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characteristic: hostID

text: metagenome

text: equimolar pooling

characteristic: library construction method

text: mouse gut metagenome

characteristic: pcr conditions

characteristic: pcr primers

characteristic: sample volume or weight for DNA extraction

text: duodenum

characteristic: sampleType

text: mouse gut metagenome

text: Illumina MiSeq v3

characteristic: target gene

characteristic: week-after-start


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Max Rubner-Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-04-07-2022-11:58:51:385-69378

characteristic: Submitter Id

characteristic: adapters

characteristic: cageID

characteristic: collection date

text: mouse BAL01b, duodenum sample

characteristic: description

characteristic: environment (biome)

text: ENVO_2100002:intestine environment

characteristic: environment (feature)

text: ENVO_02000026:chyme material

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mouse (Mus musculus)

text: chow diet, rat/mouse maintenance

text: Chow

text: male

text: host-associated

text: metagenome

characteristic: investigation type

text: equimolar pooling

text: mouse gut metagenome

characteristic: organism

characteristic: project name

text: duodenum

text: mouse gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Max Rubner-Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-04-07-2022-11:58:51:385-69379

text: mouse BAL06c, duodenum sample

text: ENVO_2100002:intestine environment

text: ENVO_02000026:chyme material

text: Germany

text: Mouse (Mus musculus)

characteristic: host common name

text: chow diet, rat/mouse maintenance

characteristic: host diet

text: Chow

characteristic: host diet short

characteristic: host growth conditions

characteristic: host infra-specific name

text: male

characteristic: host sex

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

characteristic: hostID

text: metagenome

text: equimolar pooling

characteristic: library construction method

text: mouse gut metagenome

characteristic: pcr conditions

characteristic: pcr primers

characteristic: sample volume or weight for DNA extraction

text: duodenum

characteristic: sampleType

text: mouse gut metagenome

text: Illumina MiSeq v3

characteristic: target gene

characteristic: week-after-start


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Max Rubner-Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-04-07-2022-11:58:51:385-69380

characteristic: Submitter Id

characteristic: adapters

characteristic: cageID

characteristic: collection date

text: mouse BAL09b, duodenum sample

characteristic: description

characteristic: environment (biome)

text: ENVO_2100002:intestine environment

characteristic: environment (feature)

text: ENVO_02000026:chyme material

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mouse (Mus musculus)

text: male

text: host-associated

text: metagenome

characteristic: investigation type

text: equimolar pooling

text: mouse gut metagenome

characteristic: organism

characteristic: project name

text: duodenum

text: mouse gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Max Rubner-Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-04-07-2022-11:58:51:385-69381

text: fwd:AATGATACGGCGACCACCGAGATCTACACNNNNNNNNTATGGTAATTGT::rev:CAAGCAGAAGACGGCATACGAGATNNNNNNNNAAGTCGAGAGTCAGTCAGCC

text: mouse BAL01c, duodenum sample

text: ENVO_2100002:intestine environment

text: ENVO_02000026:chyme material

text: Germany

text: Mouse (Mus musculus)

characteristic: host common name

text: chow diet, rat/mouse maintenance

characteristic: host diet

text: Chow

characteristic: host diet short

characteristic: host growth conditions

characteristic: host infra-specific name

text: male

characteristic: host sex

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

characteristic: hostID

text: metagenome

text: equimolar pooling

characteristic: library construction method

text: mouse gut metagenome

characteristic: pcr conditions

characteristic: pcr primers

characteristic: sample volume or weight for DNA extraction

text: duodenum

characteristic: sampleType

text: mouse gut metagenome

text: Illumina MiSeq v3

characteristic: target gene

characteristic: week-after-start


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Max Rubner-Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-04-07-2022-11:58:51:385-69382

characteristic: Submitter Id

characteristic: adapters

characteristic: cageID

characteristic: collection date

text: mouse BAL04b, duodenum sample

characteristic: description

characteristic: environment (biome)

text: ENVO_2100002:intestine environment

characteristic: environment (feature)

text: ENVO_02000026:chyme material

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mouse (Mus musculus)

text: male

text: host-associated

text: metagenome

characteristic: investigation type

text: equimolar pooling

text: mouse gut metagenome

characteristic: organism

characteristic: project name

text: duodenum

text: mouse gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Max Rubner-Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-04-07-2022-11:58:51:385-69383

text: mouse BAL07a, duodenum sample

text: ENVO_01001033:digestive tract environment

text: ENVO_2100002:intestine environment

text: ENVO_02000026:chyme material

text: Germany

text: Mouse (Mus musculus)

characteristic: host common name

characteristic: host diet

characteristic: host diet short

characteristic: host growth conditions

characteristic: host infra-specific name

text: male

characteristic: host sex

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

characteristic: hostID

text: metagenome

text: equimolar pooling

characteristic: library construction method

text: mouse gut metagenome

characteristic: pcr conditions

characteristic: pcr primers

characteristic: sample volume or weight for DNA extraction

text: duodenum

characteristic: sampleType

text: mouse gut metagenome

text: Illumina MiSeq v3

characteristic: target gene

characteristic: week-after-start


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Max Rubner-Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-04-07-2022-11:58:51:386-69384

characteristic: Submitter Id

characteristic: adapters

characteristic: cageID

characteristic: collection date

text: mouse BAL09c, duodenum sample

characteristic: description

characteristic: environment (biome)

text: ENVO_2100002:intestine environment

characteristic: environment (feature)

text: ENVO_02000026:chyme material

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mouse (Mus musculus)

text: specific pathogen free conditions,;open cages; 3 animals/cage; 12h light-dark cycle; 22�C

text: male

text: host-associated

text: metagenome

characteristic: investigation type

text: equimolar pooling

text: mouse gut metagenome

characteristic: organism

characteristic: project name

text: duodenum

text: mouse gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Max Rubner-Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-04-07-2022-11:58:51:386-69385

text: mouse BAL02a, duodenum sample

text: ENVO_2100002:intestine environment

text: ENVO_02000026:chyme material

text: Germany

text: Mouse (Mus musculus)

characteristic: host common name

text: purified diet, AIN93G

characteristic: host diet

characteristic: host diet short

characteristic: host growth conditions

characteristic: host infra-specific name

text: male

characteristic: host sex

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

characteristic: hostID

text: metagenome

text: equimolar pooling

characteristic: library construction method

text: mouse gut metagenome

text: initial denaturation:98degC_2min; 25 cycles: denaturation:98degC_10s; annealing:55degC_30s; extension:72degC_15s; final_extension:72degC_5min

characteristic: pcr conditions

characteristic: pcr primers

characteristic: sample volume or weight for DNA extraction

text: duodenum

characteristic: sampleType

text: mouse gut metagenome

text: Illumina MiSeq v3

characteristic: target gene

characteristic: week-after-start


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Max Rubner-Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-04-07-2022-11:58:51:386-69386

characteristic: Submitter Id

characteristic: adapters

characteristic: cageID

characteristic: collection date

text: mouse BAL04c, duodenum sample

characteristic: description

characteristic: environment (biome)

text: ENVO_2100002:intestine environment

characteristic: environment (feature)

text: ENVO_02000026:chyme material

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mouse (Mus musculus)

text: male

text: host-associated

text: metagenome

characteristic: investigation type

text: equimolar pooling

text: mouse gut metagenome

characteristic: organism

text: fwd:GTGYCAGCMGCCGCGGTAA::rev:GGACTACNVGGGTWTCTAAT

characteristic: project name

text: duodenum

text: mouse gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Max Rubner-Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-04-07-2022-11:58:51:386-69387

text: mouse BAL07b, duodenum sample

text: ENVO_2100002:intestine environment

text: ENVO_02000026:chyme material

text: Germany

text: Mouse (Mus musculus)

characteristic: host common name

characteristic: host diet

characteristic: host diet short

characteristic: host growth conditions

characteristic: host infra-specific name

text: male

characteristic: host sex

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

characteristic: hostID

text: metagenome

text: equimolar pooling

characteristic: library construction method

text: mouse gut metagenome

characteristic: pcr conditions

characteristic: pcr primers

characteristic: sample volume or weight for DNA extraction

text: duodenum

characteristic: sampleType

text: mouse gut metagenome

text: Illumina MiSeq v3

characteristic: target gene

characteristic: week-after-start


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Max Rubner-Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-04-07-2022-11:58:51:386-69388

characteristic: Submitter Id

characteristic: adapters

characteristic: cageID

characteristic: collection date

text: mouse BAL02b, duodenum sample

characteristic: description

characteristic: environment (biome)

text: ENVO_2100002:intestine environment

characteristic: environment (feature)

text: ENVO_02000026:chyme material

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mouse (Mus musculus)

text: purified diet, AIN93G

text: male

text: host-associated

text: metagenome

characteristic: investigation type

text: equimolar pooling

text: mouse gut metagenome

characteristic: organism

characteristic: project name

text: duodenum

text: mouse gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Max Rubner-Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-04-07-2022-11:58:51:386-69389

text: mouse BAL02c, duodenum sample

text: ENVO_2100002:intestine environment

text: ENVO_02000026:chyme material

text: Germany

text: Mouse (Mus musculus)

characteristic: host common name

text: purified diet, AIN93G

characteristic: host diet

characteristic: host diet short

characteristic: host growth conditions

characteristic: host infra-specific name

text: male

characteristic: host sex

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

characteristic: hostID

text: metagenome

text: equimolar pooling

characteristic: library construction method

text: mouse gut metagenome

characteristic: pcr conditions

characteristic: pcr primers

characteristic: sample volume or weight for DNA extraction

text: duodenum

characteristic: sampleType

text: mouse gut metagenome

text: Illumina MiSeq v3

characteristic: target gene

characteristic: week-after-start


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Max Rubner-Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-04-07-2022-11:58:51:387-69390

characteristic: Submitter Id

characteristic: adapters

characteristic: cageID

characteristic: collection date

text: mouse BAL05b, duodenum sample

characteristic: description

characteristic: environment (biome)

text: ENVO_2100002:intestine environment

characteristic: environment (feature)

text: ENVO_02000026:chyme material

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mouse (Mus musculus)

text: purified diet, AIN93G

text: male

text: host-associated

text: metagenome

characteristic: investigation type

text: equimolar pooling

text: mouse gut metagenome

characteristic: organism

characteristic: project name

text: duodenum

text: mouse gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Max Rubner-Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-04-07-2022-11:58:51:387-69391

text: mouse BAL08a, duodenum sample

text: ENVO_2100002:intestine environment

text: ENVO_02000026:chyme material

text: Germany

text: Mouse (Mus musculus)

characteristic: host common name

text: purified diet, based on AIN93G, 3.75% pectin, 3.75% Synergy1, 7.5% cellulose

characteristic: host diet

characteristic: host diet short

characteristic: host growth conditions

characteristic: host infra-specific name

text: male

characteristic: host sex

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

characteristic: hostID

text: metagenome

text: equimolar pooling

characteristic: library construction method

text: mouse gut metagenome

characteristic: pcr conditions

characteristic: pcr primers

characteristic: sample volume or weight for DNA extraction

text: duodenum

characteristic: sampleType

text: mouse gut metagenome

text: Illumina MiSeq v3

characteristic: target gene

characteristic: week-after-start


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Max Rubner-Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-04-07-2022-11:58:51:387-69392

characteristic: Submitter Id

characteristic: adapters

characteristic: cageID

characteristic: collection date

text: mouse BAL05c, duodenum sample

characteristic: description

characteristic: environment (biome)

text: ENVO_2100002:intestine environment

characteristic: environment (feature)

text: ENVO_02000026:chyme material

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mouse (Mus musculus)

text: purified diet, AIN93G

text: male

text: host-associated

text: metagenome

characteristic: investigation type

text: equimolar pooling

text: mouse gut metagenome

characteristic: organism

characteristic: project name

text: duodenum

text: mouse gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Max Rubner-Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-04-07-2022-11:58:51:387-69393

text: fwd:AATGATACGGCGACCACCGAGATCTACACNNNNNNNNTATGGTAATTGT::rev:CAAGCAGAAGACGGCATACGAGATNNNNNNNNAAGTCGAGAGTCAGTCAGCC

text: mouse BAL08b, duodenum sample

text: ENVO_2100002:intestine environment

text: ENVO_02000026:chyme material

text: Germany

text: Mouse (Mus musculus)

characteristic: host common name

characteristic: host diet

characteristic: host diet short

characteristic: host growth conditions

characteristic: host infra-specific name

text: male

characteristic: host sex

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

characteristic: hostID

text: metagenome

text: equimolar pooling

characteristic: library construction method

text: mouse gut metagenome

characteristic: pcr conditions

characteristic: pcr primers

characteristic: sample volume or weight for DNA extraction

text: duodenum

characteristic: sampleType

text: mouse gut metagenome

text: Illumina MiSeq v3

characteristic: target gene

characteristic: week-after-start


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Max Rubner-Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-04-07-2022-11:58:51:387-69394

characteristic: Submitter Id

characteristic: adapters

characteristic: cageID

characteristic: collection date

text: mouse BAL03b, duodenum sample

characteristic: description

characteristic: environment (biome)

text: ENVO_2100002:intestine environment

characteristic: environment (feature)

text: ENVO_02000026:chyme material

characteristic: environment (material)

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mouse (Mus musculus)

text: purified diet, based on AIN93G, 2.25% pectin, 2.25% Synergy1, 10.5% cellulose

text: male

text: host-associated

text: metagenome

characteristic: investigation type

text: equimolar pooling

text: mouse gut metagenome

characteristic: organism

characteristic: project name

text: duodenum

text: mouse gut metagenome

text: Illumina MiSeq v3

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Max Rubner-Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-04-07-2022-11:58:51:387-69395

text: mouse BAL06a, duodenum sample

text: ENVO_01001033:digestive tract environment

text: ENVO_2100002:intestine environment

text: ENVO_02000026:chyme material

text: Germany

text: Mouse (Mus musculus)

characteristic: host common name

text: chow diet, rat/mouse maintenance

characteristic: host diet

text: Chow

characteristic: host diet short

characteristic: host growth conditions

characteristic: host infra-specific name

text: male

characteristic: host sex

characteristic: host taxid

text: host-associated

characteristic: host-associated environmental package

characteristic: hostID

text: metagenome

text: equimolar pooling

characteristic: library construction method

text: mouse gut metagenome

characteristic: pcr conditions

characteristic: pcr primers

characteristic: sample volume or weight for DNA extraction

text: duodenum

characteristic: sampleType

text: mouse gut metagenome

text: Illumina MiSeq v3

characteristic: target gene

characteristic: week-after-start


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY HEALTH NETWORK

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:UNIVERSITY HEALTH NETWORK

characteristic: Submitter Id

text: human

characteristic: common name

text: Myeloma cell line

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: title


text: INSTITUT DE CIENCIES DEL MAR

text: public

tag: Namespace:INSTITUT DE CIENCIES DEL MAR

text: coral reef biome

characteristic: broad-scale environmental context

characteristic: collection date

text: sample taken between the living branches, ∼1 cm next to the polyps (sample IN)

text: seawater

characteristic: environmental medium

text: Yes

characteristic: environmental sample

text: French Polynesia

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: coral reef water

characteristic: local environmental context

text: uncultured prokaryote

text: 515F-Y (5'-GTGYCAGCMGCCGCGGTAA-3') and 926R (5'-CCGYCAATTYMTTTRAGTTT-3')

characteristic: pcr primers

text: uncultured prokaryote

characteristic: target subfragment

text: Coral-associated planktonic 16S


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: INSTITUT DE CIENCIES DEL MAR

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: coral reef biome

text: sample taken deeper between the branches, ∼1 cm next to the coral skeleton colonized by turf algae (sample AL)

text: seawater

text: Yes

text: French Polynesia

text: coral reef water

text: uncultured prokaryote

text: uncultured prokaryote

characteristic: target gene

text: Coral-associated planktonic 16S


text: INSTITUT DE CIENCIES DEL MAR

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: coral reef biome

characteristic: broad-scale environmental context

characteristic: collection date

text: sample taken 2 meters down current from the patch over a sandy bottom ∼2 m deep (sample OUT)

characteristic: description

text: seawater

characteristic: environmental medium

text: Yes

text: French Polynesia

text: coral reef water

text: uncultured prokaryote

characteristic: organism

text: uncultured prokaryote

text: Coral-associated planktonic 16S

characteristic: title


text: metagenome

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

text: SC

text: public

text: metagenome

characteristic: common name

text: metagenome

text: metagenome


text: Vibrio parahaemolyticus

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus


text: Vibrio alginolyticus

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Vibrio alginolyticus

text: Vibrio alginolyticus

text: Vibrio alginolyticus

text: Vibrio alginolyticus


text: Pseudomonas luteola

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Pseudomonas luteola

text: Pseudomonas luteola

text: Pseudomonas luteola

text: Pseudomonas luteola


text: mixed

characteristic: ArrayExpress-SEX

text: Oscheius guentheri

text: Mixed

characteristic: GENDER

text: SC

text: public

characteristic: Submitter Id

text: Oscheius guentheri

text: Oscheius guentheri

text: Oscheius guentheri


text: mixed

text: Oscheius sp. JU1439

text: Mixed

text: SC

text: public

text: Oscheius sp. JU1439

text: Oscheius sp. JU1439

text: Oscheius sp. JU1439


text: mixed

text: Auanema sp. JU3283

text: Mixed

text: SC

text: public

text: Auanema sp. JU3283

text: Auanema sp. JU3283

text: Auanema sp. JU3283


text: mixed

text: Oscheius sp. DF5033

text: Mixed

text: SC

text: public

text: Oscheius sp. DF5033

text: Oscheius sp. DF5033

text: Oscheius sp. DF5033


text: mixed

text: Auanema rhodensis

text: Mixed

text: SC

text: public

text: Auanema rhodensis

text: Auanema rhodensis

text: Auanema rhodensis


text: mixed

text: Auanema freiburgensis

text: Mixed

text: SC

text: public

text: Auanema freiburgensis

text: Auanema freiburgensis

text: Auanema freiburgensis


text: mixed

text: Auanema sp. JU1783

text: Mixed

text: SC

text: public

text: Auanema sp. JU1783

text: Auanema sp. JU1783

text: Auanema sp. JU1783


text: mixed

text: Auanema sp. JU1809

text: Mixed

text: SC

text: public

text: Auanema sp. JU1809

text: Auanema sp. JU1809

text: Auanema sp. JU1809


text: mixed

text: Auanema sp. JU3284

text: Mixed

text: SC

text: public

text: Auanema sp. JU3284

text: Auanema sp. JU3284

text: Auanema sp. JU3284


text: mixed

text: Auanema sp. NKZ329

text: Mixed

text: SC

text: public

text: Auanema sp. NKZ329

text: Auanema sp. NKZ329

text: Auanema sp. NKZ329


text: mixed

text: Auanema sp. APS23

text: Mixed

text: SC

text: public

text: Auanema sp. APS23

text: Auanema sp. APS23

text: Auanema sp. APS23


text: Escherichia coli

text: SC

text: public

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli


text: mixed

text: Caenorhabditis sp. 48

text: Mixed

text: SC

text: public

text: Caenorhabditis sp. 48

text: Caenorhabditis sp. BRC20454

text: Caenorhabditis sp. BRC20454


text: mixed

text: Caenorhabditis sp. 49

text: Mixed

text: SC

text: public

text: Caenorhabditis sp. 49

text: Caenorhabditis sp. BRC20456

text: Caenorhabditis sp. BRC20456


text: mixed

text: Caenorhabditis sp. 50

text: Mixed

text: SC

text: public

text: Caenorhabditis sp. 50

text: Caenorhabditis sp. BRC20494

text: Caenorhabditis sp. BRC20494


text: mixed

text: Caenorhabditis sp. 54

text: Mixed

text: SC

text: public

text: Caenorhabditis sp. 54

text: Caenorhabditis sp. BRC20483

text: Caenorhabditis sp. BRC20483


text: mixed

text: Caenorhabditis sp. DF5070

text: Mixed

text: SC

text: public

text: Caenorhabditis sp. DF5070

text: Caenorhabditis sp. DF5070

text: Caenorhabditis sp. DF5070


text: mixed

text: Caenorhabditis angaria

text: Mixed

text: SC

text: public

text: Caenorhabditis angaria

text: Caenorhabditis angaria

text: Caenorhabditis angaria


text: Loughborough University

text: public

tag: Namespace:Loughborough University

text: E. coli isolate from waste water from Dhaka city, Bangladesh.

characteristic: description

text: Bangladesh

characteristic: geographic location (country and/or sea)

text: Dhaka city

characteristic: geographic location (region and locality)

text: Escherichia coli

text: Escherichia coli

text: E. coli isolate (311311DL064)


text: Loughborough University

text: public

text: Bangladesh

text: Dhaka city

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: E. coli isolate (311312DL169)

characteristic: title


characteristic: ENA-CHECKLIST

text: Loughborough University

text: public

text: E. coli isolate from solid waste from Dhaka city, Bangladesh.

text: Bangladesh

text: Dhaka city

text: Escherichia coli

text: Escherichia coli

text: E. coli isolate (311512DL187)


characteristic: ENA-FIRST-PUBLIC

text: Loughborough University

text: public

text: E. coli isolate from human faeces from Dhaka city, Bangladesh.

text: Bangladesh

text: Dhaka city

text: Escherichia coli

text: Escherichia coli

text: E. coli isolate (312021DL084)


characteristic: ENA-LAST-UPDATE

text: Loughborough University

text: public

text: E. coli isolate from tap water from Dhaka city, Bangladesh.

text: Bangladesh

text: Dhaka city

text: Escherichia coli

text: Escherichia coli

text: E. coli isolate (31312DL182)


characteristic: External Id

text: Loughborough University

text: public

text: Bangladesh

text: Dhaka city

text: Escherichia coli

text: Escherichia coli

text: E. coli isolate (31412DL181)


text: Loughborough University

characteristic: INSDC center name

text: public

text: Bangladesh

text: Dhaka city

text: Escherichia coli

text: Escherichia coli

text: E. coli isolate (31412DL185)


text: Loughborough University

characteristic: INSDC first public

text: public

text: Bangladesh

text: Dhaka city

text: Escherichia coli

text: Escherichia coli

text: E. coli isolate (31712DL165)


text: Loughborough University

characteristic: INSDC last update

text: public

text: Bangladesh

text: Dhaka city

text: Escherichia coli

text: Escherichia coli

text: E. coli isolate (31712DL183)


text: Loughborough University

text: public

characteristic: INSDC status

text: Bangladesh

text: Dhaka city

text: Escherichia coli

text: Escherichia coli

text: E. coli isolate (31712DL185)


text: Loughborough University

text: public

characteristic: SRA accession

text: Bangladesh

text: Dhaka city

text: Escherichia coli

text: Escherichia coli

text: E. coli isolate (31712DL187)


text: Loughborough University

text: public

text: E. coli isolate from a poultry caecal sample from Dhaka city, Bangladesh.

text: Bangladesh

text: Dhaka city

text: Escherichia coli

text: Escherichia coli

text: E. coli isolate (31812DL182)


text: Loughborough University

text: public

text: Bangladesh

text: Dhaka city

text: Escherichia coli

text: Escherichia coli

text: E. coli isolate (322222DL180)


text: public

tag: Namespace:Institute of Molecular Genetics of the Czech Academy of Sciences

text: 50 to 56

unit: day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: Protocols: Three days after surgery, we isolated the cerebral cortex adjacent to the site of injury. Fluorescence-activated cell sorting was used to obtain CD31/45 negative and CellTrace-calcein green positive viable cells carrying tdTomato/NG2 red fluorescence. In adult males, middle cerebral artery occlusion (MCAO) induced focal cerebral ischemia. For healthy tissue (CTRL), sham-operated mice were used. Software cellranger (10X Genomics) version 6.1.1 was used to demultiplex fastq files from Illumina bcl files with default parameters. First-strand cDNA was extracted from cell suspension (8 individuals pooled per group) during library preparation routine using Chromium next gem single-cell 3′ reagent kit (version 3.1). Single-cell RNA-seq libraries were prepared using the Chromium controller instrument and Chromium next gem single-cell 3′ reagent kit (version 3.1) according to the manufacturer’s protocol (both 10× Genomics, Pleasanton, CA, USA) targeting at 4000 cells per sample. The quality and quantity of the resulting cDNA libraries was determined using Agilent 2100 Bioanalyzer (Agilent, Santa Clara, CA, USA).

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

characteristic: genotype

text: tdTomato-positive; NG2-positive; CD31-negative; CD45-negative

characteristic: immunophenotype

text: pool of healthy individuals

characteristic: individual

characteristic: injury

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: cerebral cortex

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: CTRL


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute of Molecular Genetics of the Czech Academy of Sciences

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: 50 to 56

text: ArrayExpress

text: house mouse

characteristic: description

text: adult

text: Cerebral ischemia

text: pool of injured individuals

text: middle cerebral artery occlusion

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: cerebral cortex

text: Mus musculus

text: male

text: MCAO

characteristic: title


text: Zebrafish

characteristic: ArrayExpress-PHENOTYPE

text: unknown

characteristic: ArrayExpress-SEX

text: Danio rerio

characteristic: ArrayExpress-SPECIES

text: Unknown

characteristic: GENDER

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Zebrafish

characteristic: PHENOTYPE

characteristic: SRA accession

text: zebrafish

characteristic: common name

text: Danio rerio

text: Danio rerio


text: mixed

text: Auanema rhodensis

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Mixed

text: SC

text: public

text: Auanema rhodensis

text: Auanema rhodensis

text: Auanema rhodensis


text: mixed

text: Auanema sp. 6

characteristic: External Id

text: Mixed

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Auanema sp. 6

text: Auanema sp. JU1809

text: Auanema sp. JU1809


text: mixed

text: Oscheius sp. A

text: Mixed

text: SC

text: public

characteristic: Submitter Id

text: Oscheius sp. A

text: Oscheius sp. SB194

characteristic: organism

text: Oscheius sp. SB194


text: Salmonella enterica

text: SC

text: public

text: Salmonella enterica

text: Salmonella enterica

text: Salmonella enterica

characteristic: title


text: NIOO-KNAW

text: public

text: biostimulant-amended material

characteristic: description

text: Terrestrial biome

characteristic: environment (biome)

text: environmental material

characteristic: environment (feature)

text: sandy soil

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: soil metagenome

text: Microbes involved in gelatin degradation used as plant biostimulant

characteristic: project name

text: soil metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: soil

characteristic: soil environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIOO-KNAW

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: biostimulant-amended material

text: Terrestrial biome

text: environmental material

text: compost soil

text: Netherlands

text: metagenome

text: soil metagenome

text: soil metagenome

text: Illumina MiSeq

text: soil


text: NIOO-KNAW

text: public

characteristic: Submitter Id

text: biostimulant-amended material

characteristic: description

text: Terrestrial biome

characteristic: environment (biome)

text: environmental material

characteristic: environment (feature)

text: paper product

characteristic: environment (material)

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

text: metagenome

text: soil metagenome

characteristic: organism

text: soil metagenome

text: Illumina MiSeq

text: soil

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NIOO-KNAW

text: public

text: biostimulant-amended material

text: Terrestrial biome

text: environmental material

text: peat soil

text: Netherlands

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: project name

text: soil metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: soil

characteristic: soil environmental package


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIOO-KNAW

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: biostimulant-amended material

characteristic: description

text: Terrestrial biome

text: environmental material

text: pape product

text: Netherlands

text: metagenome

text: soil metagenome

text: soil metagenome

text: Illumina MiSeq

text: soil


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: National Institute of Biology

text: public

tag: Namespace:National Institute of Biology

text: 3 days

characteristic: age

text: radish

characteristic: common name

characteristic: cultivar

text: treated with distilled water (control)

text: protocol

characteristic: experimental factor 1

text: control

text: Seeds were placed in the plastic petridish (2r: 14 cm) on the filter paper. At the beginning of the experiment seeds were watered with 10 ml of selected treatment. Environmental temperature 22�C

characteristic: growth condition

text: Raphanus sativus

characteristic: organism

text: root tip

characteristic: organism part

characteristic: replicate

text: 3 days

characteristic: sampling time point

text: Raphanus sativus

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: National Institute of Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: 3 days

text: radish

text: treated with distilled water (control)

text: protocol

text: control

text: Raphanus sativus

text: root tip

text: 3 days

text: Raphanus sativus


characteristic: ENA-CHECKLIST

text: National Institute of Biology

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: 3 days

text: radish

text: treated with 10% aqueaous extract of F. japonica rhizomes

characteristic: description

text: protocol

text: F.japonica extract

text: Raphanus sativus

text: root tip

text: 3 days

text: Raphanus sativus


characteristic: ENA-FIRST-PUBLIC

text: National Institute of Biology

text: public

text: 3 days

characteristic: age

text: radish

characteristic: common name

text: treated with 10% aqueaous extract of F. x bohemica rhizomes

text: protocol

characteristic: experimental factor 1

text: F. x bohemica extract

text: Raphanus sativus

text: root tip

text: 3 days

text: Raphanus sativus


text: Marine Biological Association

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: MARINE BIOLOGICAL ASSOCIATION

characteristic: barcoding center

text: COPO

characteristic: broker name

text: JOANNA HARLEY | ANGELA WARD | TYRONE ROBERTS

text: MARINE BIOLOGICAL ASSOCIATION

characteristic: collecting institution

characteristic: collection date

text: PLY 262

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Devon | Plymouth | Marine Biological Association

characteristic: geographic location (region and locality)

text: cultured

characteristic: habitat

text: MARINE BIOLOGICAL ASSOCIATION

text: not applicable

characteristic: lifestage

text: Cymbomonas sp. PLY 262

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: United Kingdom | Devon | Plymouth Offshore | L5

characteristic: original collection location

text: DTOL

characteristic: project name

text: Cymbomonas sp. PLY 262

text: NOT COLLECTED

characteristic: sex

text: NOT PROVIDED

text: 10a7d5c3-d5d8-48b8-8bd3-dee1f7fc0676-DTOL-specimen

characteristic: tolid

type: derived from


text: Pseudomonas aeruginosa

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Pseudomonas aeruginosa

characteristic: common name

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa

characteristic: title