characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VS

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230925778/2023

characteristic: organism

text: active surveillance not initiated by an outbreak


status: PUBLIC

tag: attribute

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: HUG

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Laboratoire de virologie, Geneva, Switzerland

characteristic: collecting institution

text: Samuel Cordey, Aline Mamin, Francisco Perez, Ana Rita Goncalves, Laurent Kaiser, Lorenzo Cerutti, Cedric Howald, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

characteristic: collector name

text: Switzerland

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-42639708/2023

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: HUG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42640311/2023

characteristic: organism


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: HUG

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42661367/2023


characteristic: ENA-CHECKLIST

characteristic: External Id

text: HUG

text: public

text: SIB

text: Switzerland

text: GE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-42699817/2023

characteristic: isolate

characteristic: sample capture status

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Hopital du Valais, Institut Central des Hopitaux, Sion, Switzerland

text: SIB

text: Valais Hospital, Central Institute; Sion, Switzerland

characteristic: collection date

text: Alexis Dumoulin, Lorenzo Cerutti, Cedric Howald, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VS

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230931823/2023

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Hopital du Valais, Institut Central des Hopitaux, Sion, Switzerland

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: VS

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230939953/2023


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: HUG

text: public

text: SIB

text: Switzerland

text: GE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-42709507/2023

characteristic: isolate

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: HUG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42703210/2023

characteristic: organism


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: VS

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230950057/2023


characteristic: ENA-CHECKLIST

characteristic: External Id

text: HUG

text: public

text: SIB

text: Switzerland

text: GE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-42707248/2023

characteristic: isolate

characteristic: sample capture status

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VS

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230921145/2023

characteristic: organism

text: active surveillance not initiated by an outbreak


characteristic: ENA-CHECKLIST

characteristic: External Id

text: HUG

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Laboratoire de virologie, Geneva, Switzerland

characteristic: collecting institution

text: Samuel Cordey, Aline Mamin, Francisco Perez, Ana Rita Goncalves, Laurent Kaiser, Lorenzo Cerutti, Cedric Howald, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

characteristic: collector name

text: Switzerland

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42645878/2023


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: SIB

text: Switzerland

text: VS

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VS-ICH-2230922971/2023

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: HUG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42702770/2023

characteristic: organism


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Valais Hospital, Central Institute; Sion, Switzerland

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: VS

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230944760/2023


characteristic: ENA-CHECKLIST

characteristic: External Id

text: HUG

text: public

text: SIB

text: Switzerland

text: GE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-42646485/2023

characteristic: isolate

characteristic: sample capture status

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Hopital du Valais, Institut Central des Hopitaux, Sion, Switzerland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

characteristic: collection date

text: Alexis Dumoulin, Lorenzo Cerutti, Cedric Howald, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VS

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230942413/2023

characteristic: organism


characteristic: ENA-CHECKLIST

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: VS

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-ICH-2230945100/2023


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

text: public

tag: Namespace:Tree of Life Programme

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: NARRIV strain in culture collection of Roxanne Beinart, GSO, URI, RI, USA

unit: m

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: RHODE ISLAND | NARRAGANSETT | UNIVERSITY OF RHODE ISLAND

text: stratified brackish river anoxic sediment

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: USA | RHODE ISLAND | NARRAGANSETT | NARROW RIVER

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: ciliate metagenome

text: NOT PROVIDED

text: 7506e665-6d80-4a3e-86f7-f7783817496a-asg-metagenome

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (region and locality)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Trichococcus sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: multicore sampler

text: uncultured Trichococcus sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: GTDB-TK (version 2.1.1); GTDB (release 207_v2)

text: taxonomic classification defined by topology and ANI

text: c0ae99b1-cb40-4d12-a71f-1a0d4fb162ef-asg-MAGScoT_cleanbin_000002


text: No

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

text: uncultured Micavibrio sp.

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: uncultured Micavibrio sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 70cde907-1668-45b0-9380-4a7f013b1a63-asg-MAGScoT_cleanbin_000033


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (region and locality)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Vallitaleaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: multicore sampler

text: Vallitaleaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: 76147622-ba06-4173-a59e-7e36c4963495-asg-MAGScoT_cleanbin_000044


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

text: uncultured Pelolinea sp.

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: uncultured Pelolinea sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: 7e2474f7-ae18-4798-833e-6f6869aa041d-asg-MAGScoT_cleanbin_000058


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (region and locality)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Candidatus Promineofilum sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: multicore sampler

text: Candidatus Promineofilum sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: e7580da7-5be3-4455-9355-2007bccf1ff6-asg-MAGScoT_cleanbin_000069


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

text: Thermoguttaceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: Thermoguttaceae bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 03dd40d7-6df1-4c24-ad6a-c4a44ff21208-asg-MAGScoT_cleanbin_000072


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (region and locality)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Anaerolineaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: multicore sampler

text: Anaerolineaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: ANI

text: 29fd16fb-9290-4bcc-ae71-8c9f4dac4cc6-asg-MAGScoT_cleanbin_000078


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: NARRIV strain in culture collection of Roxanne Beinart, GSO, URI, RI, USA

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

text: Planctomycetaceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: Planctomycetaceae bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: eac3ea70-8d16-40d2-a48a-58f19c6b2422-asg-MAGScoT_cleanbin_000082


text: No

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: RHODE ISLAND | NARRAGANSETT | UNIVERSITY OF RHODE ISLAND

characteristic: geographic location (region and locality)

text: stratified brackish river anoxic sediment

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Desulfarculia bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: multicore sampler

text: Desulfarculia bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: 13672e9d-aaf0-4bf2-ba8e-d7e8430a3efd-asg-MAGScoT_cleanbin_000084


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

text: Gammaproteobacteria bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: USA | RHODE ISLAND | NARRAGANSETT | NARROW RIVER

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: Gammaproteobacteria bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic classification fully defined by topology

text: d4088df4-c586-477f-bed3-86e890521e15-asg-MAGScoT_cleanbin_000089


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (region and locality)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Anaerovoracaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: multicore sampler

text: Anaerovoracaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: GTDB-TK (version 2.1.1); GTDB (release 207_v2)

text: taxonomic novelty determined using RED

text: 5bc7c745-33df-4df5-842f-842875709b11-asg-MAGScoT_cleanbin_000097


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

text: Candidatus Adiutricaceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: Candidatus Adiutricaceae bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic classification defined by topology and ANI

text: 7b7f6273-9b47-4dbf-a45b-f68d0f32170b-asg-MAGScoT_cleanbin_000098


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (region and locality)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: multicore sampler

text: bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 07f12354-3a14-4eca-a96a-59f080ab7d8e-asg-MAGScoT_cleanbin_000101


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

text: bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: e522ebea-c427-4d6a-963e-77059000e633-asg-MAGScoT_cleanbin_000104


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: NARRIV strain in culture collection of Roxanne Beinart, GSO, URI, RI, USA

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (region and locality)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Opitutales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: multicore sampler

text: Opitutales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 4c630645-9199-466d-a2d9-2a016e06723f-asg-MAGScoT_cleanbin_000105


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

text: RHODE ISLAND | NARRAGANSETT | UNIVERSITY OF RHODE ISLAND

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

text: uncultured Dehalobacter sp.

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: uncultured Dehalobacter sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: bc60043e-15fd-4ef4-a257-cfda2112f6e2-asg-MAGScoT_cleanbin_000106


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (region and locality)

text: stratified brackish river anoxic sediment

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Desulfobacterales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: multicore sampler

text: Desulfobacterales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: c7a1178f-675d-4f8e-9d1c-cf5a999419d5-asg-MAGScoT_cleanbin_000107


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

text: Candidatus Kapabacteria bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: USA | RHODE ISLAND | NARRAGANSETT | NARROW RIVER

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: Candidatus Kapabacteria bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: f18587bc-e8fe-4a0b-87f3-2148c350363e-asg-MAGScoT_cleanbin_000110


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (region and locality)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Christensenellaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: multicore sampler

text: Christensenellaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 62ff8723-0052-4f35-8cdd-234e4347704f-asg-MAGScoT_cleanbin_000114


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

text: uncultured Fusibacter sp.

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: uncultured Fusibacter sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: GTDB-TK (version 2.1.1); GTDB (release 207_v2)

text: ANI

text: 7311f50d-23af-4b62-8a2d-ce7733c7df3a-asg-MAGScoT_cleanbin_000115


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (region and locality)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Candidatus Cloacimonadales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: multicore sampler

text: Candidatus Cloacimonadales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic classification defined by topology and ANI

text: cd8927c7-9f58-4501-b555-d50b769dea49-asg-MAGScoT_cleanbin_000116


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

text: Oscillospiraceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: Oscillospiraceae bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: 1a053338-6f65-4aa0-85c7-a92828cd7d6b-asg-MAGScoT_cleanbin_000118


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: NARRIV strain in culture collection of Roxanne Beinart, GSO, URI, RI, USA

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (region and locality)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Christensenellaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: multicore sampler

text: Christensenellaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: 10ee777b-5b41-4555-99a2-f2d60adb2a1f-asg-MAGScoT_cleanbin_000120


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

text: RHODE ISLAND | NARRAGANSETT | UNIVERSITY OF RHODE ISLAND

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

text: Candidatus Pacebacteria bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: Candidatus Pacebacteria bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 71641e1b-52cd-48c8-be7d-c7a96dfdad81-asg-MAGScoT_cleanbin_000121


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (region and locality)

text: stratified brackish river anoxic sediment

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Sphaerochaetaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: multicore sampler

text: Sphaerochaetaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 0a7307de-2fec-4be2-b91e-9be558d11363-asg-MAGScoT_cleanbin_000123


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

text: Rhodococcus qingshengii

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: Rhodococcus qingshengii

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 3eb6df84-9c8d-4a45-b872-031780b8c6a1-asg-MAGScoT_cleanbin_000124


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (region and locality)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Phycisphaerae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: USA | RHODE ISLAND | NARRAGANSETT | NARROW RIVER

text: ASG

text: multicore sampler

text: Phycisphaerae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic classification fully defined by topology

text: e02750ff-3b8e-4478-b082-53164e5b533b-asg-MAGScoT_cleanbin_000125


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

text: uncultured Desulfatibacillum sp.

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: uncultured Desulfatibacillum sp.

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: b28b9ecd-a38c-4a7f-9f31-833260ae6bce-asg-MAGScoT_cleanbin_000126


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (region and locality)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Candidatus Bathyarchaeia archaeon

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: multicore sampler

text: Candidatus Bathyarchaeia archaeon

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: GTDB-TK (version 2.1.1); GTDB (release 207_v2)

text: taxonomic classification defined by topology and ANI

text: 80c1b552-19b3-4464-b73c-adcf96773e11-asg-MAGScoT_cleanbin_000128


text: No

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: NARRIV strain in culture collection of Roxanne Beinart, GSO, URI, RI, USA

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

text: Candidatus Kapabacteria bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: Candidatus Kapabacteria bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 436bc5fc-7172-4dd6-ae35-4f828a060552-asg-MAGScoT_cleanbin_000130


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: RHODE ISLAND | NARRAGANSETT | UNIVERSITY OF RHODE ISLAND

characteristic: geographic location (region and locality)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Desulfuromonas sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: multicore sampler

text: uncultured Desulfuromonas sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: f43a4289-da7e-4ab1-9099-2f0159943e87-asg-MAGScoT_cleanbin_000132


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

text: stratified brackish river anoxic sediment

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

text: Candidatus Omnitrophota bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: Candidatus Omnitrophota bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 91bacf0e-70c0-4a4a-ac0f-4b235fc156f6-asg-MAGScoT_cleanbin_000134


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (region and locality)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Proteiniclasticum sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: multicore sampler

text: uncultured Proteiniclasticum sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 02a4d413-799c-4b8a-a5ad-bdb5edd686a7-asg-MAGScoT_cleanbin_000136


text: No

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

text: Thermodesulfobacteriota bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: USA | RHODE ISLAND | NARRAGANSETT | NARROW RIVER

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: Thermodesulfobacteriota bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: bd065785-595e-4c36-9a1c-24d1cd6bf182-asg-MAGScoT_cleanbin_000137


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (region and locality)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Desulfatitalea sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: multicore sampler

text: uncultured Desulfatitalea sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: ANI

text: 1567f2c0-49c4-4461-88f8-62139f838540-asg-MAGScoT_cleanbin_000141


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

text: Desulfarculaceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: Desulfarculaceae bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: dfe497f2-653f-482f-87d1-bfb4856855d9-asg-MAGScoT_cleanbin_000144


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (region and locality)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Geopsychrobacteraceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: multicore sampler

text: Geopsychrobacteraceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: 3ff537f7-72df-4192-8a32-89d236c10ef2-asg-MAGScoT_cleanbin_000146


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: ciliate culture

text: USA

characteristic: geographic location (longitude)

characteristic: habitat

text: vegetative cell

characteristic: host life stage

text: Metopus sp. strain NARRIV

characteristic: host scientific name

characteristic: host taxid

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

characteristic: local environmental context

text: ciliate metagenome

text: Planctomycetota bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

characteristic: original collection location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ASG

characteristic: project name

text: multicore sampler

characteristic: sample collection device or method

characteristic: sample derived from

text: Planctomycetota bacterium

text: Pacbio Sequel II

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: GTDB-TK (version 2.1.1); GTDB (release 207_v2)

text: taxonomic classification defined by topology and ANI

text: 2b85411d-24ba-4b81-961f-b81a461e9005-asg-MAGScoT_cleanbin_000147


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of British Columbia

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph; hic-mapping

text: aquatic biome

characteristic: broad-scale environmental context

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: NARRIV strain in culture collection of Roxanne Beinart, GSO, URI, RI, USA

characteristic: depth

text: ciliate culture

characteristic: environmental medium

text: USA

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (region and locality)

text: vegetative cell

text: Metopus sp. strain NARRIV

text: JOHANA ROTTEROVA

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Ciliate: Metopus sp. strain NARRIV

text: estuarine biome

text: ciliate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Desulfobacterales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: multicore sampler

text: Desulfobacterales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

text: f44d6150-6f92-4457-b69c-1659ca38637d-asg-MAGScoT_cleanbin_000148