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text: Mus musculus

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text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: mouse

text: not collected

text: cm

text: g

text: Michigan State University

text: not provided

text: adult

text: serca

text: mouse gut metagenome

characteristic: organism

text: East Lansing, MI

text: TRUE

text: feces

text: feces

text: mouse gut metagenome

text: female

characteristic: title

text: June 2022 PheCA/SerCA Gavage in WT Mice


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: 1.5 mL microcentrifuge tube

text: 1.5 mL microcentrifuge tube

text: USA

characteristic: country

text: mouse feces

text: TRUE

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal distal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: feces

text: host-associated

text: USA:MI:East Lansing

text: USA

text: Mus musculus

text: weeks

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: mouse

text: not collected

text: cm

text: g

text: Michigan State University

text: not provided

text: adult

text: serca

text: mouse gut metagenome

text: East Lansing, MI

text: TRUE

text: feces

text: feces

text: mouse gut metagenome

text: female

text: June 2022 PheCA/SerCA Gavage in WT Mice


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: not provided

text: 1.5 mL microcentrifuge tube

text: 1.5 mL microcentrifuge tube

text: USA

text: mouse ileum contents

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal proximal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: intestine environment

text: host-associated

text: USA:MI:East Lansing

text: USA

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host scientific name

text: weeks

text: UBERON:gastrointestinal system

text: UBERON:lumen of gut

text: UBERON:ileum

text: mouse

text: not collected

text: cm

text: g

text: Michigan State University

text: not provided

text: adult

text: serca

text: mouse gut metagenome

text: East Lansing, MI

text: TRUE

text: ileum content

text: ileum content

text: mouse gut metagenome

text: female

text: June 2022 PheCA/SerCA Gavage in WT Mice


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: not provided

text: 1.5 mL microcentrifuge tube

text: 1.5 mL microcentrifuge tube

text: USA

text: mouse duodenum contents

text: TRUE

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal proximal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: intestine environment

text: host-associated

text: USA:MI:East Lansing

text: USA

text: Mus musculus

text: weeks

text: UBERON:gastrointestinal tract

text: UBERON:lumen of gut

text: UBERON:duodenum

text: mouse

text: not collected

text: cm

text: g

text: Michigan State University

text: not provided

characteristic: latitude

text: adult

characteristic: longitude

text: serca

characteristic: mcba

text: mouse gut metagenome

text: East Lansing, MI

text: TRUE

text: duodenum content

text: duodenum content

text: mouse gut metagenome

text: female

characteristic: sex

text: June 2022 PheCA/SerCA Gavage in WT Mice


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: not provided

characteristic: collection date

text: 1.5 mL microcentrifuge tube

text: 1.5 mL microcentrifuge tube

text: USA

text: mouse ileum contents

text: TRUE

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal proximal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: intestine environment

text: host-associated

text: USA:MI:East Lansing

text: USA

text: Mus musculus

text: weeks

text: UBERON:gastrointestinal system

text: UBERON:lumen of gut

text: UBERON:ileum

text: mouse

text: not collected

text: cm

text: g

text: Michigan State University

text: not provided

text: adult

text: serca

text: mouse gut metagenome

characteristic: organism

text: East Lansing, MI

text: TRUE

text: ileum content

text: ileum content

text: mouse gut metagenome

text: female

text: June 2022 PheCA/SerCA Gavage in WT Mice

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

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characteristic: SRA accession

text: not provided

text: 1.5 mL microcentrifuge tube

text: 1.5 mL microcentrifuge tube

text: USA

characteristic: country

text: mouse cecal contents

text: TRUE

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal distal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: intestine environment

text: host-associated

text: USA:MI:East Lansing

text: USA

text: Mus musculus

text: weeks

text: UBERON:gastrointestinal tract

text: UBERON:lumen of gut

text: UBERON:caecum

text: mouse

text: not collected

text: cm

text: g

text: Michigan State University

text: not provided

text: adult

text: pheca

text: mouse gut metagenome

text: East Lansing, MI

text: TRUE

text: cecum content

text: cecum content

text: mouse gut metagenome

text: male

text: June 2022 PheCA/SerCA Gavage in WT Mice


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: not provided

text: 1.5 mL microcentrifuge tube

text: 1.5 mL microcentrifuge tube

text: USA

text: mouse duodenum contents

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal proximal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: intestine environment

text: host-associated

text: USA:MI:East Lansing

text: USA

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host scientific name

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text: UBERON:gastrointestinal tract

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text: UBERON:duodenum

text: mouse

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text: cm

text: g

text: Michigan State University

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text: adult

text: pheca

text: mouse gut metagenome

text: East Lansing, MI

text: TRUE

text: duodenum content

text: duodenum content

text: mouse gut metagenome

text: male

text: June 2022 PheCA/SerCA Gavage in WT Mice


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: not provided

text: 1.5 mL microcentrifuge tube

text: 1.5 mL microcentrifuge tube

text: USA

text: mouse feces

text: TRUE

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal distal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: feces

text: host-associated

text: USA:MI:East Lansing

text: USA

text: Mus musculus

text: weeks

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: mouse

text: not collected

text: cm

text: g

text: Michigan State University

text: not provided

characteristic: latitude

text: adult

characteristic: longitude

text: pheca

characteristic: mcba

text: mouse gut metagenome

text: East Lansing, MI

text: TRUE

text: feces

text: feces

text: mouse gut metagenome

text: male

characteristic: sex

text: June 2022 PheCA/SerCA Gavage in WT Mice


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: Submitter Id

text: not provided

characteristic: collection date

text: 1.5 mL microcentrifuge tube

text: 1.5 mL microcentrifuge tube

text: USA

text: mouse feces

text: TRUE

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal distal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: feces

text: host-associated

text: USA:MI:East Lansing

text: USA

text: Mus musculus

text: weeks

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: mouse

text: not collected

text: cm

text: g

text: Michigan State University

text: not provided

text: adult

text: pheca

text: mouse gut metagenome

characteristic: organism

text: East Lansing, MI

text: TRUE

text: feces

text: feces

text: mouse gut metagenome

text: male

characteristic: title

text: June 2022 PheCA/SerCA Gavage in WT Mice


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: 1.5 mL microcentrifuge tube

text: 1.5 mL microcentrifuge tube

text: USA

characteristic: country

text: mouse ileum contents

text: TRUE

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal proximal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: intestine environment

text: host-associated

text: USA:MI:East Lansing

text: USA

text: Mus musculus

text: weeks

text: UBERON:gastrointestinal system

text: UBERON:lumen of gut

text: UBERON:ileum

text: mouse

text: not collected

text: cm

text: g

text: Michigan State University

text: not provided

text: adult

text: pheca

text: mouse gut metagenome

text: East Lansing, MI

text: TRUE

text: ileum content

text: ileum content

text: mouse gut metagenome

text: male

text: June 2022 PheCA/SerCA Gavage in WT Mice


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: not provided

text: 1.5 mL microcentrifuge tube

text: 1.5 mL microcentrifuge tube

text: USA

text: mouse cecal contents

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal distal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: intestine environment

text: host-associated

text: USA:MI:East Lansing

text: USA

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host scientific name

text: weeks

text: UBERON:gastrointestinal tract

text: UBERON:lumen of gut

text: UBERON:caecum

text: mouse

text: not collected

text: cm

text: g

text: Michigan State University

text: not provided

text: adult

text: pheca

text: mouse gut metagenome

text: East Lansing, MI

text: TRUE

text: cecum content

text: cecum content

text: mouse gut metagenome

text: female

text: June 2022 PheCA/SerCA Gavage in WT Mice


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: not provided

text: 1.5 mL microcentrifuge tube

text: 1.5 mL microcentrifuge tube

text: USA

text: mouse duodenum contents

text: TRUE

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal proximal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: intestine environment

text: host-associated

text: USA:MI:East Lansing

text: USA

text: Mus musculus

text: weeks

text: UBERON:gastrointestinal tract

text: UBERON:lumen of gut

text: UBERON:duodenum

text: mouse

text: not collected

text: cm

text: g

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characteristic: latitude

text: adult

characteristic: longitude

text: pheca

characteristic: mcba

text: mouse gut metagenome

text: East Lansing, MI

text: TRUE

text: duodenum content

text: duodenum content

text: mouse gut metagenome

text: female

characteristic: sex

text: June 2022 PheCA/SerCA Gavage in WT Mice


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

characteristic: Submitter Id

text: not provided

characteristic: collection date

text: 1.5 mL microcentrifuge tube

text: 1.5 mL microcentrifuge tube

text: USA

text: mouse feces

text: TRUE

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal distal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: feces

text: host-associated

text: USA:MI:East Lansing

text: USA

text: Mus musculus

text: weeks

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: mouse

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text: cm

text: g

text: Michigan State University

text: not provided

text: adult

text: pheca

text: mouse gut metagenome

characteristic: organism

text: East Lansing, MI

text: TRUE

text: feces

text: feces

text: mouse gut metagenome

text: female

text: June 2022 PheCA/SerCA Gavage in WT Mice

characteristic: title


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: 1.5 mL microcentrifuge tube

text: 1.5 mL microcentrifuge tube

text: USA

characteristic: country

text: mouse feces

text: TRUE

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal distal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: feces

text: host-associated

text: USA:MI:East Lansing

text: USA

text: Mus musculus

text: weeks

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: mouse

text: not collected

text: cm

text: g

text: Michigan State University

text: not provided

text: adult

text: pheca

text: mouse gut metagenome

text: East Lansing, MI

text: TRUE

text: feces

text: feces

text: mouse gut metagenome

text: female

text: June 2022 PheCA/SerCA Gavage in WT Mice


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: not provided

text: 1.5 mL microcentrifuge tube

text: 1.5 mL microcentrifuge tube

text: USA

text: mouse ileum contents

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal proximal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: intestine environment

text: host-associated

text: USA:MI:East Lansing

text: USA

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host scientific name

text: weeks

text: UBERON:gastrointestinal system

text: UBERON:lumen of gut

text: UBERON:ileum

text: mouse

text: not collected

text: cm

text: g

text: Michigan State University

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text: adult

text: pheca

text: mouse gut metagenome

text: East Lansing, MI

text: TRUE

text: ileum content

text: ileum content

text: mouse gut metagenome

text: female

text: June 2022 PheCA/SerCA Gavage in WT Mice


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

text: public

text: not provided

text: 1.5 mL microcentrifuge tube

text: 1.5 mL microcentrifuge tube

text: USA

text: mouse duodenum contents

text: TRUE

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal proximal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: intestine environment

text: host-associated

text: USA:MI:East Lansing

text: USA

text: Mus musculus

text: weeks

text: UBERON:gastrointestinal tract

text: UBERON:lumen of gut

text: UBERON:duodenum

text: mouse

text: not collected

text: cm

text: g

text: Michigan State University

text: not provided

characteristic: latitude

text: adult

characteristic: longitude

text: pheca

characteristic: mcba

text: mouse gut metagenome

text: East Lansing, MI

text: TRUE

text: duodenum content

text: duodenum content

text: mouse gut metagenome

text: female

characteristic: sex

text: June 2022 PheCA/SerCA Gavage in WT Mice


text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: not provided

characteristic: collection date

text: 1.5 mL microcentrifuge tube

text: 1.5 mL microcentrifuge tube

text: USA

text: mouse ileum contents

text: TRUE

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal proximal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: intestine environment

text: host-associated

text: USA:MI:East Lansing

text: USA

text: Mus musculus

text: weeks

text: UBERON:gastrointestinal system

text: UBERON:lumen of gut

text: UBERON:ileum

text: mouse

text: not collected

text: cm

text: g

text: Michigan State University

text: not provided

text: adult

text: pheca

text: mouse gut metagenome

characteristic: organism

text: East Lansing, MI

text: TRUE

text: ileum content

text: ileum content

text: mouse gut metagenome

text: female

text: June 2022 PheCA/SerCA Gavage in WT Mice

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: 1.5 mL microcentrifuge tube

text: 1.5 mL microcentrifuge tube

text: USA

characteristic: country

text: blank

text: TRUE

text: Control

text: Negative

text: Sterile water blank

text: Sterile water blank

text: urban biome

text: research facility

text: sterile water

text: misc environment

text: USA:MI:East Lansing

text: USA

text: not applicable

text: not applicable

text: weeks

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: cm

text: not applicable

text: not applicable

text: g

text: Michigan State University

text: not provided

text: not applicable

text: not applicable

text: metagenome

text: East Lansing, MI

text: TRUE

text: control blank

text: control blank

text: metagenome

text: not applicable

text: not applicable

text: June 2022 PheCA/SerCA Gavage in WT Mice


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HUG

text: public

text: SIB

characteristic: broker name

text: Laboratoire de virologie, Geneva, Switzerland

characteristic: collecting institution

text: Samuel Cordey, Aline Mamin, Francisco Perez, Ana Rita Goncalves, Laurent Kaiser, Lorenzo Cerutti, Cedric Howald, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-42750240/2023

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance not initiated by an outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: ROMINA BATISTA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:ROMINA BATISTA

characteristic: Submitter Id

text: Rogerio Rossi

unit: DD

text: Universidade Federal do Mato Grosso

characteristic: collection date

text: Alta Floresta titi monkey

characteristic: common name

characteristic: description

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mato Grosso Alta floresta

text: Forest

characteristic: habitat

text: Rogerio Rossi

text: Universidade Federal do Mato Grosso

text: adult

characteristic: lifestage

text: Plecturocebus grovesi

characteristic: organism

text: tissue

characteristic: organism part

text: ORG.one

characteristic: project name

text: Plecturocebus grovesi

text: female

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HUG

characteristic: INSDC center name

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characteristic: SRA accession

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: TI

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

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text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/TI-SNRCI-HUG-42784402/2023

characteristic: isolate

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characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HUG

characteristic: INSDC first public

characteristic: INSDC last update

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characteristic: INSDC status

characteristic: Submitter Id

text: SIB

characteristic: collection date

text: Switzerland

text: GE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42766706/2023

characteristic: organism

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HUG

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GE

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42722460/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HUG

text: public

text: SIB

text: Switzerland

text: GE

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-42810497/2023

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HUG

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: SIB

characteristic: collection date

text: Switzerland

text: VS

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VS-HUG-42730556/2023

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HUG

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GE

characteristic: geographic location (region and locality)

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42817809/2023


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: LSHTM

text: public

text: not provided

characteristic: description

text: not applicable

text: Leishmania donovani

text: Leishmania donovani


text: HUG

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

text: Switzerland

text: GE

text: Human

characteristic: host common name

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characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-42733544/2023

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HUG

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: GE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42757122/2023

characteristic: organism

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HUG

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42800244/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HUG

characteristic: INSDC center name

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text: SIB

text: Switzerland

text: GE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-42759714/2023

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HUG

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: GE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42810781/2023

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HUG

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42757101/2023


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HUG

characteristic: INSDC center name

text: public

text: SIB

text: Laboratoire de virologie, Geneva, Switzerland

text: Switzerland

text: GE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-42728534/2023

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HUG

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Samuel Cordey, Aline Mamin, Francisco Perez, Ana Rita Goncalves, Laurent Kaiser, Lorenzo Cerutti, Cedric Howald, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-SNRCI-HUG-42851023/2023

characteristic: organism

text: other

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HUG

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42781055/2023

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance not initiated by an outbreak


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HUG

characteristic: INSDC center name

text: public

text: SIB

text: Switzerland

text: GE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-42824529/2023

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HUG

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: GE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42771852/2023

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HUG

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42756130/2023


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HUG

characteristic: INSDC center name

text: public

text: SIB

text: Switzerland

text: GE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-42810595/2023

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HUG

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-HUG-42724148/2023

characteristic: organism

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Laboratory of genomics and metagenomics, Institute of Microbiology, University Hospital Centre and University of Lausanne, Switzerland

text: SIB

text: Hôpital Cantonal de Fribourg - HFR, CH-1752 Villars-sur-Glâne, Switzerland

text: Trestan Pillonel, Damien Jacot, Sébastien Aeby, Gilbert Greub, Claire Bertelli

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN18020/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HUG

characteristic: INSDC center name

text: public

text: SIB

text: Switzerland

text: GE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-42846208/2023

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HUG

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: GE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42853241/2023

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HUG

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

text: Laboratoire de virologie, Geneva, Switzerland

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42757071/2023


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HUG

characteristic: INSDC center name

text: public

text: SIB

text: Samuel Cordey, Aline Mamin, Francisco Perez, Ana Rita Goncalves, Laurent Kaiser, Lorenzo Cerutti, Cedric Howald, Henri Pegeot, Melyssa Elies, Deborah Penet, Keith Harshman, Ioannis Xenarios

text: Switzerland

text: GE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-42758768/2023

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HUG

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: Switzerland

text: LU

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/LU-SNRCI-HUG-42807307/2023

characteristic: organism

text: other

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Cantacuzino NIMMRD

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Cantacuzino NIMMRD

text: Romania

characteristic: geographic location (country and/or sea)

text: Bucharest

characteristic: geographic location (region and locality)

text: Homo sapiens

characteristic: host

text: Yes

text: feces

text: Escherichia coli

text: Escherichia coli


characteristic: ENA-CHECKLIST

text: Cantacuzino NIMMRD

characteristic: INSDC center name

text: public

text: Romania

text: Cluj

text: Homo sapiens

text: Yes

text: feces

text: Escherichia coli

text: Escherichia coli


characteristic: ENA-FIRST-PUBLIC

text: Cantacuzino NIMMRD

text: public

characteristic: SRA accession

text: Romania

text: Buzau

text: Homo sapiens

text: Yes

text: feces

text: Escherichia coli

text: Escherichia coli


text: Cantacuzino NIMMRD

text: public

characteristic: Submitter Id

text: Romania

text: Brasov

text: Homo sapiens

text: Yes

text: feces

text: Escherichia coli

text: Escherichia coli


text: University Hospital of North Norway

text: public

tag: Namespace:University Hospital of North Norway

text: Bacterial culture

characteristic: description

text: Norway

text: Enterococcus faecium

text: Enterococcus faecium


text: HUG

text: public

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

text: GE

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-42738079/2023

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status


sample PS017-N

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: sample PS017-N

tag: Namespace:Computational Bioscience Research Center, KAUST

text: human

characteristic: common name

text: CRC sample

text: Singapore

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: CRC sample

characteristic: title


sample PS017-T

characteristic: ENA-FIRST-PUBLIC

text: Computational Bioscience Research Center, KAUST

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: sample PS017-T

characteristic: Submitter Id

characteristic: collection date

text: human

text: CRC sample

characteristic: description

text: Singapore

text: Homo sapiens

text: Homo sapiens

text: CRC sample


sample PS018-N

text: public

text: sample PS018-N

text: human

text: CRC sample

text: Singapore

text: Homo sapiens

text: Homo sapiens

text: CRC sample


sample PS018-T

text: public

text: sample PS018-T

text: human

text: CRC sample

text: Singapore

text: Homo sapiens

text: Homo sapiens

text: CRC sample


sample PS019-N

text: public

text: sample PS019-N

text: human

text: CRC sample

text: Singapore

text: Homo sapiens

text: Homo sapiens

text: CRC sample


sample PS021-N

text: public

text: sample PS021-N

text: human

text: CRC sample

text: Singapore

text: Homo sapiens

text: Homo sapiens

text: CRC sample


sample PS021-T

text: public

text: sample PS021-T

text: human

text: CRC sample

text: Singapore

text: Homo sapiens

text: Homo sapiens

text: CRC sample


sample PS025-T

text: public

text: sample PS025-T

text: human

text: CRC sample

text: Singapore

text: Homo sapiens

text: Homo sapiens

text: CRC sample


sample PS026-N

text: public

text: sample PS026-N

text: human

text: CRC sample

text: Singapore

text: Homo sapiens

text: Homo sapiens

text: CRC sample


sample PS027-N

text: public

text: sample PS027-N

text: human

text: CRC sample

text: Singapore

text: Homo sapiens

text: Homo sapiens

text: CRC sample


sample PS028-N

text: public

text: sample PS028-N

text: human

text: CRC sample

text: Singapore

text: Homo sapiens

text: Homo sapiens

text: CRC sample


sample PS028-T

text: public

text: sample PS028-T

text: human

text: CRC sample

text: Singapore

text: Homo sapiens

text: Homo sapiens

text: CRC sample


sample PS029-N

text: public

text: sample PS029-N

text: human

text: CRC sample

text: Singapore

text: Homo sapiens

text: Homo sapiens

text: CRC sample


sample PS029-T

text: public

text: sample PS029-T

text: human

text: CRC sample

text: Singapore

text: Homo sapiens

text: Homo sapiens

text: CRC sample


sample PS031-N

text: public

text: sample PS031-N

text: human

text: CRC sample

text: Singapore

text: Homo sapiens

text: Homo sapiens

text: CRC sample


sample PS032-N

text: public

text: sample PS032-N

text: human

text: CRC sample

text: Singapore

text: Homo sapiens

text: Homo sapiens

text: CRC sample


sample PS032-T

text: public

text: sample PS032-T

text: human

text: CRC sample

text: Singapore

text: Homo sapiens

text: Homo sapiens

text: CRC sample


sample PS033-N

text: public

text: sample PS033-N

text: human

text: CRC sample

text: Singapore

text: Homo sapiens

text: Homo sapiens

text: CRC sample


sample PS033-T

text: public

text: sample PS033-T

text: human

text: CRC sample

text: Singapore

text: Homo sapiens

text: Homo sapiens

text: CRC sample


text: HUG

text: public

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-42846149/2023

characteristic: isolate

text: active surveillance not initiated by an outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HUG

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SIB

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42765010/2023

characteristic: organism

characteristic: title


text: homo sapiens

characteristic: ArrayExpress-Species

text: SC

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

characteristic: collection date

text: human

characteristic: common name

text: not provided

text: Homo sapiens

text: Homo sapiens

characteristic: strain


characteristic: ENA-CHECKLIST

text: HUG

text: public

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-42727408/2023

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ROBERT KOCH INSTITUT

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:ROBERT KOCH INSTITUT

text: E. coli WGS

characteristic: description

text: Germany

characteristic: geographic location (country and/or sea)

text: not provided

text: homo sapiens

text: stool

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: E. coli WGS

characteristic: title


characteristic: ENA-CHECKLIST

text: HUG

text: public

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

text: GE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/GE-HUG-42798001/2023


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HUG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SIB

text: Switzerland

text: GE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/GE-HUG-42823216/2023

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Respiratory Virus Unit, Microbiology Services Colindale, Public Health England

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

text: not provided

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: receipt date

text: active surveillance in response to outbreak

text: not provided

characteristic: serotype (required for a seropositive sample)

characteristic: title

text: not provided

characteristic: virus identifier


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Respiratory Virus Unit, Microbiology Services Colindale, Public Health England

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: COVID-19 Genomics UK Consortium

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: not provided

text: not provided


text: Homo sapiens

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not provided

text: human

characteristic: common name

text: not provided

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: organism

text: Homo sapiens


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia

text: ArrayExpress

characteristic: broker name

text: kidney cell

text: not collected

text: human

text: Protocols: In this study monoclonal cell lines carrying mutations in snoRNA genes were obtained. A number of protospacer sequences were selected for specific cleavage of GAS5 (growth arrest-specific 5) gene. Plasmid pSpCas9(BB)-2A-GFP (pX458) (Addgene, #48138) was used as an expression vector. Human 293FT cell line (Thermo Fisher Scientific) was used in the study. Cells were cultured in DMEM/F12 medium (Thermo Fisher Scientific) containing 10% FBS (Thermo Fisher Scientific) and supplemented with 1x solutions of MEM NEAA (Thermo Fisher Scientific), sodium pyruvate, GlutaMax, and Anti-Anti (Thermo Fisher Scientific) with addition of MycoZap Prophylactic (200 µl per 100 mL of medium) (Lonza) at 37°C and 5% CO2. Total RNA was isolated from control cells and clones using phenol-chloroform extraction (LIRA reagent from Biolabmix Ltd., Novosibirsk, Russia) according the manufacturer’s protocol and analyzed on a 1.5% agarose gel and using an Agilent 2100 Bioanalyzer (Agilent Technologies), with sample with RIN > 8 used. The quality of the Input RNA was assessed by the Agilent Bioanalyzer 2100 System and RNA 6000 Nano Chip (Agilent Technologies). For PolyA mRNA enrichment, high quality RNA with a RIN score > 8 was used. ~1 µg total RNA were used for library construction. PolyA mRNA enrichment and construction of RNA-seq libraries were performed with the NEBNext® Poly(A) mRNA Magnetic Isolation Modulethe and NEBNext® Ultra™ II Directional RNA Library Prep Kit for Illumina (NEB) correspondingly. Library concentrations were quantified with the Qubit 2.0 Fluorometric Quantitation system using Qubit DNA HS Assay Kit (ThermoFisher Scientific). The quality control analysis of library was assessed using the Agilent Bioanalyzer 2100 System and DNA High Sensitivity Chip (Agilent Technologies). The quality of the Input RNA was assessed by the Agilent Bioanalyzer 2100 System and Agilent Small RNA kit (Agilent, USA). ~0.5 µg of enriched small RNA (<200 nucleotide length) was used for library construction. The construction of cDNA libraries according to a standard protocol using a NEBNext Multiplex Small RNA Library Prep Kit for Illumina (New England Biolabs, UK), as well as massive parallel sequencing on a NextSeq Illumina 500 platform, were conducted at the Institute of Fundamental Medicine and Biology, Kazan Federal University (Kazan, Russia). Libraries concentrations were quantified with the Qubit 2.0 Fluorometric Quantitation system using Qubit DNA HS Assay Kit (Thermo Fisher Scientific). The quality control analysis of libraries was assessed using the Agilent Bioanalyzer 2100 System and DNA High Sensitivity Chip (Agilent, USA).

characteristic: description

text: embryo stage

characteristic: developmental stage

characteristic: disease

text: Control (initial 293FT cell line)

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: kidney

characteristic: organism part

characteristic: replicate

text: Homo sapiens

characteristic: target gene

characteristic: title


characteristic: ENA-CHECKLIST

text: Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: kidney cell

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: embryo stage

text: Control (initial 293FT cell line)

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: kidney

text: Homo sapiens


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

characteristic: broker name

text: kidney cell

text: not collected

text: human

characteristic: description

text: embryo stage

text: CRISPR/Cas9 mediated mutation of GAS5 gene

text: not collected

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: kidney

text: Homo sapiens


text: public

text: ArrayExpress

text: kidney cell

text: not collected

text: human

text: embryo stage

characteristic: developmental stage

characteristic: disease

text: Control (Cells transfected with pX458 plasmid without sgRNA)

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: kidney

characteristic: organism part

characteristic: replicate

text: Homo sapiens

characteristic: target gene

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: kidney cell

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: Protocols: In this study monoclonal cell lines carrying mutations in snoRNA genes were obtained. A number of protospacer sequences were selected for specific cleavage of GAS5 (growth arrest-specific 5) gene. Plasmid pSpCas9(BB)-2A-GFP (pX458) (Addgene, #48138) was used as an expression vector. Human 293FT cell line (Thermo Fisher Scientific) was used in the study. Cells were cultured in DMEM/F12 medium (Thermo Fisher Scientific) containing 10% FBS (Thermo Fisher Scientific) and supplemented with 1x solutions of MEM NEAA (Thermo Fisher Scientific), sodium pyruvate, GlutaMax, and Anti-Anti (Thermo Fisher Scientific) with addition of MycoZap Prophylactic (200 µl per 100 mL of medium) (Lonza) at 37°C and 5% CO2. Small RNA (<200 nucleotide length) was extracted from cells using phenol/chloroform extraction with LRU RNA extraction kit (Biolabmix, Russia) according the manufacturer’s protocol and analyzed on a 1.5% TAE-agarose gel and using Bioanalyzer 2100 instrument (Agilent, USA) with an Agilent Small RNA kit. The quality of the Input RNA was assessed by the Agilent Bioanalyzer 2100 System and Agilent Small RNA kit (Agilent, USA). ~0.5 µg of enriched small RNA (<200 nucleotide length) was used for library construction. The construction of cDNA libraries according to a standard protocol using a NEBNext Multiplex Small RNA Library Prep Kit for Illumina (New England Biolabs, UK), as well as massive parallel sequencing on a NextSeq Illumina 500 platform, were conducted at the Institute of Fundamental Medicine and Biology, Kazan Federal University (Kazan, Russia). Libraries concentrations were quantified with the Qubit 2.0 Fluorometric Quantitation system using Qubit DNA HS Assay Kit (Thermo Fisher Scientific). The quality control analysis of libraries was assessed using the Agilent Bioanalyzer 2100 System and DNA High Sensitivity Chip (Agilent, USA).

text: embryo stage

text: Control (initial 293FT cell line)

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: kidney

text: Homo sapiens


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

characteristic: broker name

text: kidney cell

text: not collected

text: human

characteristic: description

text: embryo stage

text: not collected

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: kidney

text: Homo sapiens


text: public

text: ArrayExpress

text: kidney cell

text: not collected

text: human

text: embryo stage

characteristic: developmental stage

characteristic: disease

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: kidney

characteristic: organism part

characteristic: replicate

text: Homo sapiens

characteristic: target gene

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

characteristic: Submitter Id

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Denmark

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: sample capture status


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Danish Covid-19 Genome Consortium

text: Denmark

text: not provided

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

text: CSIRO Agriculture and Food

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:CSIRO Agriculture and Food

characteristic: Submitter Id

characteristic: collection date

text: Bacteria 16SrRNA amplicon library week -0-Control

characteristic: description

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Bacteria 16SrRNA amplicon library week -0-3-NOP

text: Australia

characteristic: geographic location (country and/or sea)

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Bacteria 16SrRNA amplicon library week -6-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Bacteria 16SrRNA amplicon library week -6-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Bacteria 16SrRNA amplicon library week -18-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Bacteria 16SrRNA amplicon library week -18-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Bacteria 16SrRNA amplicon library week -24-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Bacteria 16SrRNA amplicon library week -24-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Bacteria 16SrRNA amplicon library week -30-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Bacteria 16SrRNA amplicon library week -30-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Archaea 16SrRNA amplicon library week -6-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Archaea 16SrRNA amplicon library week -6-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Archaea 16SrRNA amplicon library week -18-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Archaea 16SrRNA amplicon library week -18-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Archaea 16SrRNA amplicon library week -24-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Archaea 16SrRNA amplicon library week -24-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Archaea 16SrRNA amplicon library week -30-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Archaea 16SrRNA amplicon library week -30-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Protozoa 16SrRNA amplicon library week -6-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Protozoa 16SrRNA amplicon library week -6-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Protozoa 16SrRNA amplicon library week -18-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Protozoa 16SrRNA amplicon library week -18-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Protozoa 16SrRNA amplicon library week -24-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Protozoa 16SrRNA amplicon library week -24-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Protozoa 16SrRNA amplicon library week -30-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Protozoa 16SrRNA amplicon library week -30-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Bacteria 16SrRNA amplicon library week -5-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Bacteria 16SrRNA amplicon library week -5-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Bacteria 16SrRNA amplicon library week -10-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Bacteria 16SrRNA amplicon library week -10-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Bacteria 16SrRNA amplicon library week -15-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Bacteria 16SrRNA amplicon library week -15-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Bacteria 16SrRNA amplicon library week -23-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Bacteria 16SrRNA amplicon library week -23-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Bacteria 16SrRNA amplicon library week -35-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Bacteria 16SrRNA amplicon library week -35-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Bacteria 16SrRNA amplicon library week -55-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Bacteria 16SrRNA amplicon library week -55-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Archaea 16SrRNA amplicon library week -5-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Archaea 16SrRNA amplicon library week -5-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Archaea 16SrRNA amplicon library week -10-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Archaea 16SrRNA amplicon library week -10-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Archaea 16SrRNA amplicon library week -15-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Archaea 16SrRNA amplicon library week -15-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Archaea 16SrRNA amplicon library week -23-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Archaea 16SrRNA amplicon library week -23-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Archaea 16SrRNA amplicon library week -35-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Archaea 16SrRNA amplicon library week -35-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Archaea 16SrRNA amplicon library week -55-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Archaea 16SrRNA amplicon library week -55-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Protozoa 16SrRNA amplicon library week -5-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Protozoa 16SrRNA amplicon library week -5-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Protozoa 16SrRNA amplicon library week -10-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Protozoa 16SrRNA amplicon library week -10-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Protozoa 16SrRNA amplicon library week -15-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Protozoa 16SrRNA amplicon library week -15-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Protozoa 16SrRNA amplicon library week -23-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Protozoa 16SrRNA amplicon library week -23-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Protozoa 16SrRNA amplicon library week -35-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Protozoa 16SrRNA amplicon library week -35-3-NOP

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Protozoa 16SrRNA amplicon library week -55-Control

text: Australia

text: metagenome

text: metagenome


text: CSIRO Agriculture and Food

text: public

text: Protozoa 16SrRNA amplicon library week -55-3-NOP

text: Australia

text: metagenome

text: metagenome


text: UNIVERSITY OF GLASGOW

text: public

tag: Namespace:UNIVERSITY OF GLASGOW

text: not provided

text: metagenome

text: metagenome


Naive_d2_RNA rep1

text: IHSM La Mayora, CSIC-UMA

text: public

text: Naive_d2_RNA rep1

tag: Namespace:IHSM La Mayora, CSIC-UMA

text: 6 weeks old

characteristic: age

text: tomato

characteristic: common name

text: No whitefly and no virus_2 days post ToCV Infection

text: Moneymaker

characteristic: genotype

text: Spain

text: Solanum lycopersicum

text: Solanum lycopersicum


Naive_d2_RNA rep2

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IHSM La Mayora, CSIC-UMA

text: public

text: Naive_d2_RNA rep2

text: 6 weeks old

text: tomato

text: Moneymaker

text: Spain

text: Solanum lycopersicum

text: Solanum lycopersicum


Naive_d2_RNA rep3

text: IHSM La Mayora, CSIC-UMA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Naive_d2_RNA rep3

text: 6 weeks old

text: tomato

text: Moneymaker

text: Spain

text: Solanum lycopersicum

text: Solanum lycopersicum


Naive_d7_RNA rep1

text: IHSM La Mayora, CSIC-UMA

text: public

text: Naive_d7_RNA rep1

text: 6 weeks old

text: tomato

text: No whitefly and no virus_7 days post ToCV Infection

text: Moneymaker

text: Spain

text: Solanum lycopersicum

characteristic: organism

text: Solanum lycopersicum

characteristic: title


Naive_d7_RNA rep2

characteristic: ENA-CHECKLIST

text: IHSM La Mayora, CSIC-UMA

characteristic: INSDC last update

text: public

text: Naive_d7_RNA rep2

text: 6 weeks old

text: tomato

text: Moneymaker

text: Spain

text: Solanum lycopersicum

text: Solanum lycopersicum


Naive_d7_RNA rep3

text: IHSM La Mayora, CSIC-UMA

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Naive_d7_RNA rep3

text: 6 weeks old

text: tomato

text: Moneymaker

text: Spain

text: Solanum lycopersicum

text: Solanum lycopersicum


Naive_d14_RNA rep1

text: IHSM La Mayora, CSIC-UMA

text: public

text: Naive_d14_RNA rep1

characteristic: Submitter Id

text: 6 weeks old

characteristic: collection date

text: tomato

text: No whitefly and no virus_14 days post ToCV Infection

text: Moneymaker

text: Spain

text: Solanum lycopersicum

text: Solanum lycopersicum


Naive_d14_RNA rep2

text: IHSM La Mayora, CSIC-UMA

text: public

text: Naive_d14_RNA rep2

text: 6 weeks old

text: tomato

characteristic: description

text: Moneymaker

text: Spain

characteristic: geographic location (country and/or sea)

text: Solanum lycopersicum

text: Solanum lycopersicum


Naive_d14_RNA rep3

text: IHSM La Mayora, CSIC-UMA

text: public

text: Naive_d14_RNA rep3

text: 6 weeks old

characteristic: age

text: tomato

characteristic: common name

text: Moneymaker

text: Spain

text: Solanum lycopersicum

text: Solanum lycopersicum


BemisiaMock_d2_RNA rep1

characteristic: ENA-FIRST-PUBLIC

text: IHSM La Mayora, CSIC-UMA

text: public

text: BemisiaMock_d2_RNA rep1

text: 6 weeks old

text: tomato

text: Non-viruliferous whiteflies_2 days post ToCV Infection

text: Moneymaker

characteristic: genotype

text: Spain

text: Solanum lycopersicum

text: Solanum lycopersicum


BemisiaMock_d2_RNA rep2

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IHSM La Mayora, CSIC-UMA

text: public

text: BemisiaMock_d2_RNA rep2

text: 6 weeks old

text: tomato

text: Moneymaker

text: Spain

text: Solanum lycopersicum

text: Solanum lycopersicum


BemisiaMock_d2_RNA rep3

text: IHSM La Mayora, CSIC-UMA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: BemisiaMock_d2_RNA rep3

text: 6 weeks old

text: tomato

text: Moneymaker

text: Spain

text: Solanum lycopersicum

text: Solanum lycopersicum


BemisiaMock_d7_RNA rep1

text: IHSM La Mayora, CSIC-UMA

text: public

text: BemisiaMock_d7_RNA rep1

text: 6 weeks old

text: tomato

text: Non-viruliferous whiteflies_7 days post ToCV Infection

text: Moneymaker

text: Spain

text: Solanum lycopersicum

characteristic: organism

text: Solanum lycopersicum

characteristic: title


BemisiaMock_d7_RNA rep2

characteristic: ENA-CHECKLIST

text: IHSM La Mayora, CSIC-UMA

characteristic: INSDC last update

text: public

text: BemisiaMock_d7_RNA rep2

text: 6 weeks old

text: tomato

text: Moneymaker

text: Spain

text: Solanum lycopersicum

text: Solanum lycopersicum


BemisiaMock_d7_RNA rep3

text: IHSM La Mayora, CSIC-UMA

text: public

characteristic: INSDC status

characteristic: SRA accession

text: BemisiaMock_d7_RNA rep3

text: 6 weeks old

text: tomato

text: Moneymaker

text: Spain

text: Solanum lycopersicum

text: Solanum lycopersicum


BemisiaMock_d14_RNA rep1

text: IHSM La Mayora, CSIC-UMA

text: public

text: BemisiaMock_d14_RNA rep1

characteristic: Submitter Id

text: 6 weeks old

characteristic: collection date

text: tomato

text: Non-viruliferous whiteflies_14 days post ToCV Infection

text: Moneymaker

text: Spain

text: Solanum lycopersicum

text: Solanum lycopersicum


BemisiaMock_d14_RNA rep2

text: IHSM La Mayora, CSIC-UMA

text: public

text: BemisiaMock_d14_RNA rep2

text: 6 weeks old

text: tomato

characteristic: description

text: Moneymaker

text: Spain

characteristic: geographic location (country and/or sea)

text: Solanum lycopersicum

text: Solanum lycopersicum


BemisiaMock_d14_RNA rep3

text: IHSM La Mayora, CSIC-UMA

text: public

text: BemisiaMock_d14_RNA rep3

text: 6 weeks old

characteristic: age

text: tomato

characteristic: common name

text: Moneymaker

text: Spain

text: Solanum lycopersicum

text: Solanum lycopersicum


BemisiaToCV_d2_RNA rep1

characteristic: ENA-FIRST-PUBLIC

text: IHSM La Mayora, CSIC-UMA

text: public

text: BemisiaToCV_d2_RNA rep1

text: 6 weeks old

text: tomato

text: ToCV-viruliferous whiteflies_2 days post ToCV Infection

text: Moneymaker

characteristic: genotype

text: Spain

text: Solanum lycopersicum

text: Solanum lycopersicum


BemisiaToCV_d2_RNA rep2

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IHSM La Mayora, CSIC-UMA

text: public

text: BemisiaToCV_d2_RNA rep2

text: 6 weeks old

text: tomato

text: Moneymaker

text: Spain

text: Solanum lycopersicum

text: Solanum lycopersicum


BemisiaToCV_d2_RNA rep3

text: IHSM La Mayora, CSIC-UMA

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: BemisiaToCV_d2_RNA rep3

text: 6 weeks old

text: tomato

text: Moneymaker

text: Spain

text: Solanum lycopersicum

text: Solanum lycopersicum


BemisiaToCV_d7_RNA rep1

text: IHSM La Mayora, CSIC-UMA

text: public

text: BemisiaToCV_d7_RNA rep1

text: 6 weeks old

text: tomato

text: ToCV-viruliferous whiteflies_7 days post ToCV Infection

text: Moneymaker

text: Spain

text: Solanum lycopersicum

characteristic: organism

text: Solanum lycopersicum

characteristic: title


BemisiaToCV_d7_RNA rep2

characteristic: ENA-CHECKLIST

text: IHSM La Mayora, CSIC-UMA

characteristic: INSDC last update

text: public

text: BemisiaToCV_d7_RNA rep2

text: 6 weeks old

text: tomato

text: Moneymaker

text: Spain

text: Solanum lycopersicum

text: Solanum lycopersicum


BemisiaToCV_d7_RNA rep3

text: IHSM La Mayora, CSIC-UMA

text: public

characteristic: INSDC status

characteristic: SRA accession

text: BemisiaToCV_d7_RNA rep3

text: 6 weeks old

text: tomato

text: Moneymaker

text: Spain

text: Solanum lycopersicum

text: Solanum lycopersicum


BemisiaToCV_d14_RNA rep1

text: IHSM La Mayora, CSIC-UMA

text: public

text: BemisiaToCV_d14_RNA rep1

characteristic: Submitter Id

text: 6 weeks old

characteristic: collection date

text: tomato

text: ToCV-viruliferous whiteflies_14 days post ToCV Infection

text: Moneymaker

text: Spain

text: Solanum lycopersicum

text: Solanum lycopersicum


BemisiaToCV_d14_RNA rep2

text: IHSM La Mayora, CSIC-UMA

text: public

text: BemisiaToCV_d14_RNA rep2

text: 6 weeks old

text: tomato

characteristic: description

text: Moneymaker

text: Spain

characteristic: geographic location (country and/or sea)

text: Solanum lycopersicum

text: Solanum lycopersicum