text: public

text: marine pelagic biome (ENVO:01000023)

characteristic: broad-scale environmental context

characteristic: depth

characteristic: description

text: brackish water (ENVO:00002019)

characteristic: environmental medium

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Baltic Sea - Bothnian Sea

text: marine plankton metagenome

characteristic: organism

text: UMU

text: marine plankton metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

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characteristic: INSDC center name

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text: public

characteristic: INSDC status

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unit: m

tag: Namespace:SCIENCE FOR LIFE LABORATORY, KTH ROYAL INSTITUTE OF TECHNOLOGY

characteristic: Submitter Id

unit: hpa

unit: �C

unit: mmol/kg

text: marine pelagic biome (ENVO:01000023)

unit: code

characteristic: collection date

unit: mS/m

text: http://sharkweb.smhi.se. http://sharkdata.se

text: marine/brackish water plankton sample, sequenced with 16S and 18S rRNA metabarcoding

unit: ml/l

text: brackish water (ENVO:00002019)

text: Baltic Sea

unit: DD

text: neritic epipelagic zome biome (ENVO:01000042)

characteristic: local environmental context

text: Baltic Sea - Bothnian Bay

text: marine plankton metagenome

text: UMU

characteristic: origin

text: 341F (CCTACGGGNGGCWGCAG)-805R(GACTACHVGGGTATCTAATCC)

characteristic: pcr primers

characteristic: project name

characteristic: replicate

unit: psu

text: marine plankton metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA


text: SCIENCE FOR LIFE LABORATORY, KTH ROYAL INSTITUTE OF TECHNOLOGY

text: public

text: marine pelagic biome (ENVO:01000023)

characteristic: broad-scale environmental context

characteristic: depth

characteristic: description

text: brackish water (ENVO:00002019)

characteristic: environmental medium

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Baltic Sea - Bothnian Bay

text: marine plankton metagenome

characteristic: organism

text: UMU

text: marine plankton metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA


characteristic: ENA-CHECKLIST

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text: public

characteristic: INSDC status

text: marine pelagic biome (ENVO:01000023)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: Baltic Sea - Northern Kvarken

text: marine plankton metagenome

text: UMU

text: marine plankton metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

characteristic: collection date

text: saline water (ENVO:00002010)

text: North Sea

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text: Baltic Sea - Northern Kvarken

text: marine plankton metagenome

text: SMHI

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text: marine plankton metagenome

text: Sequencing by synthesis (Illumina)

text: Slaggo

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text: public

text: marine pelagic biome (ENVO:01000023)

characteristic: broad-scale environmental context

characteristic: depth

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text: saline water (ENVO:00002010)

characteristic: environmental medium

text: North Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Skagerrak

text: marine plankton metagenome

characteristic: organism

text: SMHI

text: marine plankton metagenome

text: Sequencing by synthesis (Illumina)

text: Slaggo

text: 16S rRNA


characteristic: ENA-CHECKLIST

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text: public

characteristic: INSDC status

text: marine pelagic biome (ENVO:01000023)

text: brackish water (ENVO:00002019)

text: Baltic Sea

text: Baltic Sea - Western Gotland Basin

text: marine plankton metagenome

text: SMHI

text: V4F(CCAGCASCYGCGGTAATTCC)-V4RB(ACTTTCGTTCTTGATYRR)

text: marine plankton metagenome

text: Sequencing by synthesis (Illumina)

text: 18S rRNA


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

characteristic: collection date

text: saline water (ENVO:00002010)

text: North Sea

characteristic: local environmental context

text: Baltic Sea - Bornholm Basin and Han� Bay

text: marine plankton metagenome

text: SMHI

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text: marine plankton metagenome

text: Sequencing by synthesis (Illumina)

text: Slaggo

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text: public

text: marine pelagic biome (ENVO:01000023)

characteristic: broad-scale environmental context

characteristic: depth

characteristic: description

text: saline water (ENVO:00002010)

characteristic: environmental medium

text: North Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Baltic Sea - Eastern Gotland Basin

text: marine plankton metagenome

characteristic: organism

text: SMHI

text: marine plankton metagenome

text: Sequencing by synthesis (Illumina)

text: 18S rRNA


characteristic: ENA-CHECKLIST

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text: public

characteristic: INSDC status

text: marine pelagic biome (ENVO:01000023)

text: saline water (ENVO:00002010)

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text: Kattegatt

text: marine plankton metagenome

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text: marine plankton metagenome

text: Sequencing by synthesis (Illumina)

text: 18S rRNA


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine pelagic biome (ENVO:01000023)

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text: brackish water (ENVO:00002019)

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characteristic: local environmental context

text: Kattegatt

text: marine plankton metagenome

text: SMHI

characteristic: origin

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text: marine plankton metagenome

text: Sequencing by synthesis (Illumina)

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text: public

text: marine pelagic biome (ENVO:01000023)

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text: brackish water (ENVO:00002019)

characteristic: environmental medium

text: Baltic Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Baltic Sea - Arkona Basin and Southern �resund

text: marine plankton metagenome

characteristic: organism

text: SMHI

text: marine plankton metagenome

text: Sequencing by synthesis (Illumina)

text: 18S rRNA


characteristic: ENA-CHECKLIST

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text: public

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text: marine pelagic biome (ENVO:01000023)

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text: Baltic Sea

text: Baltic Sea - Eastern Gotland Basin

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text: SMHI

text: marine plankton metagenome

text: Sequencing by synthesis (Illumina)

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characteristic: SRA accession

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text: North Sea

characteristic: geographic location (country and/or sea)

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characteristic: geographic location (longitude)

text: Baltic Sea - Western Gotland Basin

text: marine plankton metagenome

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characteristic: ENA-CHECKLIST

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characteristic: SRA accession

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characteristic: SRA accession

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characteristic: geographic location (longitude)

text: Baltic Sea - Western Gotland Basin

text: marine plankton metagenome

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characteristic: ENA-CHECKLIST

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characteristic: SRA accession

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Kattegatt

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characteristic: ENA-CHECKLIST

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text: Sequencing by synthesis (Illumina)

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characteristic: SRA accession

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characteristic: geographic location (longitude)

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characteristic: SRA accession

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: marine plankton metagenome

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characteristic: ENA-CHECKLIST

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characteristic: SRA accession

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Skagerrak

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characteristic: SRA accession

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text: marine pelagic biome (ENVO:01000023)

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characteristic: environmental medium

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characteristic: geographic location (country and/or sea)

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characteristic: geographic location (longitude)

text: Baltic Sea - Western Gotland Basin

text: marine plankton metagenome

characteristic: organism

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text: Sequencing by synthesis (Illumina)

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characteristic: SRA accession

characteristic: Submitter Id

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characteristic: geographic location (country and/or sea)

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characteristic: SRA accession

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characteristic: geographic location (country and/or sea)

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characteristic: geographic location (longitude)

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characteristic: INSDC status

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text: Baltic Sea - Northern Kvarken

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text: UMU

text: marine plankton metagenome

text: Sequencing by synthesis (Illumina)

text: Blank

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characteristic: SRA accession

characteristic: Submitter Id

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text: Sequencing by synthesis (Illumina)

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text: public

text: marine pelagic biome (ENVO:01000023)

characteristic: broad-scale environmental context

characteristic: depth

characteristic: description

text: saline water (ENVO:00002010)

characteristic: environmental medium

text: North Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Baltic Sea - Northern Kvarken

text: marine plankton metagenome

characteristic: organism

text: SMHI

text: marine plankton metagenome

text: Sequencing by synthesis (Illumina)

text: Slaggo

text: 18S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: marine pelagic biome (ENVO:01000023)

text: water sample_Skagerrak, station_Slaggo, date(MM-DD)_10-07

text: saline water (ENVO:00002010)

text: North Sea

text: Skagerrak

text: marine plankton metagenome

text: SMHI

text: marine plankton metagenome

text: Sequencing by synthesis (Illumina)

text: Slaggo

text: 18S rRNA


text: Plasmodium falciparum

characteristic: ArrayExpress-SPECIES

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: malaria parasite P. falciparum

characteristic: common name

text: Plasmodium falciparum

text: Plasmodium falciparum

text: Plasmodium falciparum

characteristic: title


text: Streptococcus pneumoniae

text: SC

text: public

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae

text: Streptococcus pneumoniae


text: Quadram Institute Bioscience

text: public

tag: Namespace:Quadram Institute Bioscience

text: anthropogenic terrestrial biome [ENVO_01000219]

characteristic: broad-scale environmental context

characteristic: collection date

text: Human faecal samples

characteristic: description

text: fecal material [ENVO_00002003]

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

unit: year

characteristic: host age

text: Before Low Bioactive Diet

characteristic: host diet

text: female

characteristic: host sex

characteristic: host subject id

text: urban biome [ENVO_01000249]

characteristic: local environmental context

text: human gut metagenome

text: DIME

characteristic: project name

text: human gut metagenome

text: Illumina NovaSeq 6001

characteristic: sequencing method

type: derived from


text: Homo sapiens

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: human

text: Homo sapiens

characteristic: organism

text: Homo sapiens


text: EBI

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: cattle

characteristic: common name

text: Bos taurus

characteristic: same as

text: Bos taurus

text: BE063773398-21 experiment SAMEA8132972-Subcutaneous-fat-BE063773398_miRNA proxy sample submission

characteristic: title


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-45 experiment SAMEA8132995-Subcutaneous-fat-BE714385429_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-21 experiment SAMEA8133017-Subcutaneous-fat-CA-154_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-21 experiment SAMEA8133037-Subcutaneos-fat-CA-335_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-21 experiment SAMEA8133059-Subcutaneos-fat-DE-F_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-21 experiment SAMEA8133080-Subcutaneous-fat-DE-M_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-1 experiment SAMEA8132954-Adrenal-gland-cortex-BE063773398_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-25 experiment SAMEA8132975-Adrenal-gland-BE714385429_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-01 experiment SAMEA8133020-Adrenal-gland-CA-335_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-01 experiment SAMEA8133039-Adrenal-gland-DE-F_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-01 experiment SAMEA8133062-Adrenal-gland-DE-M_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-2 experiment SAMEA8132955-Cerebellum-BE063773398_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-3 experiment SAMEA8132956-Cerebrum-cortex-BE063773398_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-7 experiment SAMEA8132960-Hypothalamus-BE063773398_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-26 experiment SAMEA8132976-Cerebellum-BE714385429_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-27 experiment SAMEA8132977-Cerebrum-cortex-BE714385429_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-31 experiment SAMEA8132981-Hypothalamus-BE714385429_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-02 experiment SAMEA8132999-Cerebellum-CA-154_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-03 experiment SAMEA8133000-Cortex-CA-154_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-02 experiment SAMEA8133021-Cerebellum-CA-335_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-03 experiment SAMEA8133022-Cortex-CA-335_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-02 experiment SAMEA8133040-Hippocampus-DE-F_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-03 experiment SAMEA8133041-Cerebrum-cortex-DE-F_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-02 experiment SAMEA8133063-Cerebellum-DE-M_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-07 experiment SAMEA8133068-Hypothalamus-DE-M_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-38 experiment SAMEA8132988-Mammary-gland-BE714385429_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-48 experiment SAMEA8132997-Uterus-BE714385429_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-6 experiment SAMEA8132959-Heart-BE063773398_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-30 experiment SAMEA8132980-Heart-BE714385429_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-06 experiment SAMEA8133003-Heart-CA-154_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-06 experiment SAMEA8133025-Heart-CA-335_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-06 experiment SAMEA8133044-Heart-DE-F_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-06 experiment SAMEA8133067-Heart-DE-M_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-4 experiment SAMEA8132957-Colon-BE063773398_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-5 experiment SAMEA8132958-Duodenum-BE063773398_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-8 experiment SAMEA8132961-Ileum-BE063773398_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-9 experiment SAMEA8132962-Jejunum-BE063773398_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-29 experiment SAMEA8132979-Duodenum-BE714385429_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-32 experiment SAMEA8132982-Ileum-BE714385429_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-33 experiment SAMEA8132983-Jujenum-BE714385429_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-04 experiment SAMEA8133001-Colon-CA-154_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-05 experiment SAMEA8133002-Duodenum-CA-154_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-08 experiment SAMEA8133004-Ileum-CA-154_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-09 experiment SAMEA8133005-Jejunum-CA-154_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-04 experiment SAMEA8133023-Colon-CA-335_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-05 experiment SAMEA8133024-Duodenum-CA-335_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-08 experiment SAMEA8133026-Ileum-CA-335_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-09 experiment SAMEA8133027-Jejunum-CA-335_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-04 experiment SAMEA8133042-Colon-DE-F_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-05 experiment SAMEA8133043-Duodenum-DE-F_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-08 experiment SAMEA8133046-Ileum-DE-F_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-09 experiment SAMEA8133047-Jejunum-DE-F_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-04 experiment SAMEA8133065-Colon-DE-M_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-05 experiment SAMEA8133066-Duodenum-DE-M_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-08 experiment SAMEA8133069-Ileum-DE-M_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-09 experiment SAMEA8133070-Jejunum-DE-M_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-10 experiment SAMEA8132963-Kidney-BE063773398_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-10 experiment SAMEA8133006-Kidney-CA-154_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-10 experiment SAMEA8133028-Kidney-CA-335_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-10 experiment SAMEA8133071-Kidney-DE-M_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-14 experiment SAMEA8133010-Mammary-gland-CA-154_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-11 experiment SAMEA8132964-Liver-BE063773398_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-35 experiment SAMEA8132985-Liver-BE714385429_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-11 experiment SAMEA8133007-Liver-CA-154_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-11 experiment SAMEA8133029-Liver-CA-335_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-11 experiment SAMEA8133049-Liver-DE-F_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-11 experiment SAMEA8133072-Liver-DE-M_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-12 experiment SAMEA8132965-Lung-BE063773398_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-12 experiment SAMEA8133008-Lung-CA-154_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-12 experiment SAMEA8133030-Lung-CA-335_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-12 experiment SAMEA8133050-Lung-DE-F_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-12 experiment SAMEA8133073-Lung-DE-M_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-13 experiment SAMEA8132966-Lymph-node-BE063773398_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-13 experiment SAMEA8133009-TB-Lymph-CA-154_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-13 experiment SAMEA8133031-TB-Lymph-CA-335_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-13 experiment SAMEA8133051-Lymph-node-DE-F_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-13 experiment SAMEA8133074-Lymph-node-DE-M_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-39 experiment SAMEA8132989-Ovary-BE714385429_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-16 experiment SAMEA8132967-Pancreas-BE063773398_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-40 experiment SAMEA8132990-Pancreas-BE714385429_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-17 experiment SAMEA8132968-Pituitarygland-BE063773398_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-41 experiment SAMEA8132991-Pituitary-gland-BE714385429_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-17 experiment SAMEA8133013-Pituitary-CA-154_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-17 experiment SAMEA8133033-Pituitary-gland-CA-335_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-17 experiment SAMEA8133055-Pituitary-gland-DE-F_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-17 experiment SAMEA8133076-Pituitarygland-DE-M_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-18 experiment SAMEA8132969-Rumen-BE063773398_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-42 experiment SAMEA8132992-Rumen-BE714385429_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-19 experiment SAMEA8132970-Skeletal-muscle-BE063773398_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-43 experiment SAMEA8132993-Skeletal-muscle-BE714385429_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-19 experiment SAMEA8133015-Skeletal-muscle-CA-154_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-19 experiment SAMEA8133035-Skeletal-muscle-CA-335_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-19 experiment SAMEA8133057-Skeletal-muscle-DE-F_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-19 experiment SAMEA8133078-Skeletal-muscle-DE-M_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-20 experiment SAMEA8133058-Spleen-DE-F_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-20 experiment SAMEA8133079-Spleen-DE-M_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-22 experiment SAMEA8132973-Testis-BE063773398_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-22 experiment SAMEA8133081-Testis-DE-M_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-23 experiment SAMEA8132974-Thyroid-gland-BE063773398_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-47 experiment SAMEA8132996-Thyroid-gland-BE714385429_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-23 experiment SAMEA8133060-Thyroid-gland-DE-F_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-23 experiment SAMEA8133082-Thyroid-gland-DE-M_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-24 experiment SAMEA8133019-Uterine-horn-CA-154_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-24 experiment SAMEA8133061-Uterus-DE-F_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-20 experiment SAMEA8132971-Spleen-BE063773398_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-28 experiment SAMEA8132978-Colon-BE714385429_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-37 experiment SAMEA8132987-Lymph-node-BE714385429_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-44 experiment SAMEA8132994-Spleen-BE714385429_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-15 experiment SAMEA8133011-Ovary-CA-154_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-18 experiment SAMEA8133014-Rumen-CA-154_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-20 experiment SAMEA8133016-Spleen-CA-154_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-18 experiment SAMEA8133034-Rumen-CA-335_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-20 experiment SAMEA8133036-Spleen-CA-335_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-15 experiment SAMEA8133053-Ovary-DE-F_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-18 experiment SAMEA8133056-Rumen-DE-F_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-18 experiment SAMEA8133077-Rumen-DE-M_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-34 experiment SAMEA8132984-Kidney-BE714385429_miRNA proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-36 experiment SAMEA8132986-Lung-BE714385429_miRNA proxy sample submission


text: EarlhamInstitute

text: public

text: COPO

characteristic: broker name

text: DAVID BELL | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: collecting institution

characteristic: collection date

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Peeblesshire | Dawyck Botanic Garden | by track behind Dawyck Chapel

characteristic: geographic location (region and locality)

text: Woodland garden. On rotting logs

characteristic: habitat

text: gametophyte

characteristic: lifestage

text: Hypnum andoi

characteristic: organism part

text: DTOL

characteristic: project name

text: Hypnum andoi

text: NOT COLLECTED

characteristic: sex

text: NOT PROVIDED

text: 821ede86-6bf4-485a-8548-f2129262151b-dtol

characteristic: tolid


text: Escherichia coli

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Escherichia coli

characteristic: common name

text: Escherichia coli

characteristic: organism

text: Escherichia coli


text: Klebsiella pneumoniae

text: SC

text: public

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

characteristic: title


text: public

tag: Namespace:MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY

text: Loxodes striatus macronuclei sorted by flow cytometry from DAPI-stained cell lysate

characteristic: description

text: macronucleus

text: Loxodes striatus

text: Loxodes striatus

characteristic: strain

text: Loxodes striatus macronuclei, sample 4519.E.1


text: MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY

text: public

text: Loxodes striatus micronuclei sorted by flow cytometry from DAPI-stained cell lysate

text: micronucleus

text: Loxodes striatus

text: Loxodes striatus

text: Loxodes striatus micronuclei, sample 4519.F.1


text: public

text: macronucleus

text: Loxodes striatus

text: Loxodes striatus

text: Loxodes striatus macronuclei, sample 4519.G.1


text: public

text: micronucleus

text: Loxodes striatus

text: Loxodes striatus

text: Loxodes striatus micronuclei, sample 4519.H.1


text: Bladder cell line

characteristic: ArrayExpress-PHENOTYPE

text: Homo sapiens

text: SC

text: public

text: Bladder cell line

characteristic: PHENOTYPE

text: human

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-CHECKLIST

text: public

tag: Namespace:MRC-University of Glasgow Centre for Virus Research

text: golden hamster

text: Mesocricetus auratus

text: Mesocricetus auratus


characteristic: ENA-FIRST-PUBLIC

text: MRC-University of Glasgow Centre for Virus Research

text: public

text: golden hamster

text: Mesocricetus auratus

text: Mesocricetus auratus


text: Spleen

characteristic: ArrayExpress-Phenotype

text: unknown

characteristic: ArrayExpress-Sex

text: Canis familiaris

characteristic: ArrayExpress-Species

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Spleen

text: unknown

characteristic: ArrayExpress-SEX

text: Canis familiaris

characteristic: ArrayExpress-SPECIES

characteristic: External Id

text: Unknown

characteristic: GENDER

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Spleen

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Liver

text: unknown

text: Canis familiaris

text: Unknown

text: SC

text: public

characteristic: INSDC status

text: Liver

characteristic: SRA accession

characteristic: Submitter Id

text: dog

characteristic: common name

text: Canis lupus familiaris

characteristic: organism

text: Canis lupus familiaris

characteristic: title


text: Adrenal gland

characteristic: ArrayExpress-PHENOTYPE

text: unknown

text: Canis familiaris

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Unknown

text: SC

text: public

text: Adrenal gland

characteristic: PHENOTYPE

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Pancreas

text: unknown

characteristic: ArrayExpress-SEX

text: Canis familiaris

characteristic: ENA-LAST-UPDATE

text: Unknown

text: SC

text: public

text: Pancreas

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Lymph node

text: unknown

text: Canis familiaris

characteristic: ArrayExpress-SPECIES

characteristic: External Id

text: Unknown

text: SC

text: public

text: Lymph node

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Small intestine

text: unknown

text: Canis familiaris

text: Unknown

characteristic: GENDER

text: SC

characteristic: INSDC center name

text: public

text: Small intestine

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Brain

text: unknown

text: Canis familiaris

text: Unknown

text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Brain

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Heart

text: unknown

text: Canis familiaris

text: Unknown

text: SC

text: public

characteristic: INSDC status

text: Heart

characteristic: SRA accession

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


E-MTAB-12147:Sample 11

text: public

text: E-MTAB-12147:Sample 11

tag: Namespace:Research Institute for Farm Animal Biology (FBN)

characteristic: Submitter Id

unit: day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: chicken

characteristic: common name

text: Protocols: At the end of the trial, 18 birds [6 per feed conversion efficiency (FCE) group] were selected based on their performance during grower phase and dissected under controlled conditions. Samples were quickly removed, snap frozen in liquid nitrogen, and stored at -80°C until use. The set of tissues selected for the transcriptomic analyses comprised liver and leg muscle (M. semitendinosus) of 4 low FCE and 4 high FCE birds. Animals were selected based on their RFI-status with respect to gender and final body weight. One-day old Cobb500FF birds were housed in groups of 4-5 birds for 7 days and afterwards individually penned in cages. For each batch, 64 birds were raised until day 21, with feed intake recorded on a daily basis and weighted data recorded at days 1, 7, 14, and 21. Residual feed intake (RFI) was calculated. Based on individual feed efficiency, the top, middle, and bottom 10th percentile of chickens was identified and assigned to high, medium and low efficiency groups. Each group comprised 8 birds for which feed efficiency records were obtained during grower phase between 22 and 42 days of age. Daily feed intake was recorded and chickens were weighed at days 28, 35, and 42. Birds were checked daily for health status and welfare issues during the feeding trial. Birds had ad libitum access to fresh water. Extraction of total RNA was performed according to TRIzol Reagent protocol (Invitrogen, Darmstadt, Germany). Tissue samples were homogenized using either a syringe (duodenum, jejunum, and ileum) or a Precellys cell disruption device (breast muscle; 12sec at 5000U; Peqlab, Erlangen, Germany). Subsequently, total RNA was treated with Baseline-ZERO DNase (Biozym, Hessisch Oldendorf, Germany) and purified using the NucleoSpin RNAII kit (Macherey-Nagel, Düren, Germany) according to manufacturer’s protocols. The RNA concentration was measured by NanoDrop ND-1000 (NanoDrop, Peqlab, Erlangen, Germany). The quality of RNA was assessed employing an Agilent 2100 Bioanalyzer (Agilent Technologies, Santa Clara, CA, USA). Samples with RNA integrity numbers (RIN) values greater than 7.8 were used for DNA libraries preparation using the TruSeq Stranded mRNA preparation kit according to the manufacturer’s recommendation (Illumina, San Diego, CA, USA).

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Gallus gallus

text: Gallus gallus

text: muscle

characteristic: organism part

text: high residual feed intake (low feed conversion efficiency)

characteristic: phenotype

text: Gallus gallus

text: male

characteristic: sex

characteristic: strain

text: Sample 11


E-MTAB-12147:Sample 12

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Research Institute for Farm Animal Biology (FBN)

characteristic: INSDC center name

text: public

text: E-MTAB-12147:Sample 12

text: ArrayExpress

text: chicken

text: adult

text: wild type genotype

text: not applicable

text: Gallus gallus

characteristic: organism

text: Gallus gallus

text: muscle

text: Gallus gallus

text: female

text: Sample 12

characteristic: title


E-MTAB-12147:Sample 13

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12147:Sample 13

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: chicken

text: adult

text: wild type genotype

text: not applicable

text: Gallus gallus

text: Gallus gallus

text: muscle

text: Gallus gallus

text: female

text: Sample 13


E-MTAB-12147:Sample 15

text: public

text: E-MTAB-12147:Sample 15

text: ArrayExpress

text: chicken

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Gallus gallus

text: Gallus gallus

text: muscle

characteristic: organism part

characteristic: phenotype

text: Gallus gallus

text: male

text: Sample 15


E-MTAB-12147:Sample 3

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-12147:Sample 3

text: ArrayExpress

text: chicken

text: adult

text: wild type genotype

text: not applicable

text: Gallus gallus

text: Gallus gallus

text: liver

text: Gallus gallus

text: male

characteristic: sex

characteristic: strain

text: Sample 3


E-MTAB-12147:Sample 4

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12147:Sample 4

characteristic: Submitter Id

text: ArrayExpress

text: chicken

text: adult

text: wild type genotype

text: not applicable

text: Gallus gallus

characteristic: organism

text: Gallus gallus

text: liver

text: Gallus gallus

text: female

text: Sample 4

characteristic: title


E-MTAB-12147:Sample 5

text: public

text: E-MTAB-12147:Sample 5

characteristic: age

text: ArrayExpress

characteristic: broker name

text: chicken

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Gallus gallus

text: Gallus gallus

text: liver

text: Gallus gallus

text: female

text: Sample 5


E-MTAB-12147:Sample 7

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-12147:Sample 7

text: ArrayExpress

text: chicken

text: adult

text: wild type genotype

text: not applicable

text: Gallus gallus

text: Gallus gallus

text: liver

characteristic: organism part

characteristic: phenotype

text: Gallus gallus

text: male

text: Sample 7


E-MTAB-12147:Sample 1

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12147:Sample 1

characteristic: Submitter Id

text: ArrayExpress

text: chicken

text: adult

text: wild type genotype

text: not applicable

text: Gallus gallus

text: Gallus gallus

text: liver

text: low residual feed intake (high feed conversion efficiency)

text: Gallus gallus

text: male

characteristic: sex

characteristic: strain

text: Sample 1


E-MTAB-12147:Sample 10

text: public

text: E-MTAB-12147:Sample 10

characteristic: age

text: ArrayExpress

characteristic: broker name

text: chicken

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

text: not applicable

text: Gallus gallus

characteristic: organism

text: Gallus gallus

text: muscle

text: Gallus gallus

text: female

text: Sample 10

characteristic: title


E-MTAB-12147:Sample 14

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-12147:Sample 14

text: ArrayExpress

text: chicken

text: adult

text: wild type genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Gallus gallus

text: Gallus gallus

text: muscle

text: Gallus gallus

text: male

text: Sample 14


E-MTAB-12147:Sample 16

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12147:Sample 16

characteristic: Submitter Id

text: ArrayExpress

text: chicken

text: adult

text: wild type genotype

text: not applicable

text: Gallus gallus

text: Gallus gallus

text: muscle

characteristic: organism part

characteristic: phenotype

text: Gallus gallus

text: female

text: Sample 16


E-MTAB-12147:Sample 2

text: public

text: E-MTAB-12147:Sample 2

characteristic: age

text: ArrayExpress

characteristic: broker name

text: chicken

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

text: not applicable

text: Gallus gallus

text: Gallus gallus

text: liver

text: Gallus gallus

text: female

characteristic: sex

characteristic: strain

text: Sample 2


E-MTAB-12147:Sample 6

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-12147:Sample 6

text: ArrayExpress

text: chicken

text: adult

text: wild type genotype

text: not applicable

text: Gallus gallus

characteristic: organism

text: Gallus gallus

text: liver

text: Gallus gallus

text: male

text: Sample 6

characteristic: title


E-MTAB-12147:Sample 8

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12147:Sample 8

characteristic: Submitter Id

text: ArrayExpress

text: chicken

text: adult

text: wild type genotype

characteristic: genotype

text: not applicable

characteristic: isolate

text: Gallus gallus

text: Gallus gallus

text: liver

text: Gallus gallus

text: female

text: Sample 8


E-MTAB-12147:Sample 9

text: public

text: E-MTAB-12147:Sample 9

characteristic: age

text: ArrayExpress

characteristic: broker name

text: chicken

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: wild type genotype

text: not applicable

text: Gallus gallus

text: Gallus gallus

text: muscle

characteristic: organism part

characteristic: phenotype

text: Gallus gallus

text: male

text: Sample 9


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

text: public

tag: Namespace:Ghent University Global Campus, Ghent University

unit: week

text: ArrayExpress

text: splenocyte

text: house mouse

text: Protocols: Mice were infected by intraperitoneal (i.p) injection of with 200 parasites in 100 uL of Dulbecco's Phosphate Buffered Saline. Spleens were isolated at day 42 p.i. for T. evansi Merzouga 93. Single cell suspensions were prepared by homogenizing spleen in 6 mL of DMEM supplemented with 10% FBS and 1% penicillin/streptomycin using gentleMACS Dissociator. Cells were spun down at 314 x G for 7 minutes at 4oC after being filtered through a 70 µm pore size cell strainer. Red blood cells were removed using RBC Lysis Buffer from Biolegend. Spleen cells suspension from a single mouse and pooled spleen cells suspension from 3 individual mice (1:1:1 ratio) were prepared for further protocols.. Samples containing 10000 cells each were carried out following 10X Genomic Chromium Single Cell 3ʹ v3 pipeline Samples were carried out following 10X Genomic Chromium Single Cell 3ʹ v3 pipeline. No feature barcoding is used.

text: normal

characteristic: disease

text: wild type genotype

text: mixed pool of 3 individuals

characteristic: individual

text: Trypanosoma evansi Merzouga 93

characteristic: infect

text: Mus musculus

text: Mus musculus

text: spleen

text: Mus musculus

text: female

characteristic: sex

characteristic: strain

text: Pool


text: Ghent University Global Campus, Ghent University

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

text: splenocyte

text: house mouse

text: normal

text: wild type genotype

characteristic: genotype

text: single individual

text: Trypanosoma evansi Merzouga 93

text: Mus musculus

characteristic: organism

text: Mus musculus

text: spleen

text: Mus musculus

text: female

text: Single

characteristic: title


text: Lymph node

characteristic: ArrayExpress-PHENOTYPE

text: unknown

characteristic: ArrayExpress-SEX

text: Canis Familiaris

characteristic: ArrayExpress-SPECIES

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Unknown

characteristic: GENDER

text: SC

text: public

text: Lymph node

characteristic: PHENOTYPE

text: dog

characteristic: common name

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Skin

text: unknown

text: Canis Familiaris

characteristic: External Id

text: Unknown

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Skin

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Kidney

text: Canis familiaris

text: SC

text: public

characteristic: INSDC status

text: Kidney

characteristic: SRA accession

characteristic: Submitter Id

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Lymph node

text: Canis familiaris

text: SC

text: public

text: Lymph node

text: dog

text: Canis lupus familiaris

characteristic: organism

text: Canis lupus familiaris

characteristic: title


text: Stomach

characteristic: ArrayExpress-PHENOTYPE

text: Canis familiaris

text: SC

text: public

text: Stomach

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Adrenal gland

text: Canis familiaris

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: Adrenal gland

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Muscle

text: Canis familiaris

characteristic: ENA-CHECKLIST

text: SC

text: public

text: Muscle

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Pancreas

text: Canis familiaris

characteristic: ENA-FIRST-PUBLIC

text: SC

text: public

text: Pancreas

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Cerebellum

text: Canis familiaris

characteristic: ENA-LAST-UPDATE

text: SC

text: public

text: Cerebellum

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Small intestine

text: Canis familiaris

text: SC

text: public

text: Small intestine

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Brain

text: Canis familiaris

text: SC

text: public

text: Brain

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Unknown

text: Canis familiaris

text: SC

text: public

text: Unknown

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Smooth Muscle

text: Canis familiaris

text: SC

text: public

text: Smooth Muscle

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Brainstem

text: Canis familiaris

text: SC

text: public

text: Brainstem

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Heart

text: Canis familiaris

text: SC

text: public

text: Heart

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Intestine

text: Canis familiaris

text: SC

text: public

text: Intestine

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: public

tag: Namespace:MAX-PLANCK INSTITUTE FOR MARINE MICROBIOLOGY, BREMEN

text: marine benthic biome [ENVO:01000024]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: Metagenome of Olavius algarvensis specimen Gutless oligochaete_Med_2017_1848 from Bella_Dona

characteristic: description

text: shallow marine sediment [ENVO:03000034]

characteristic: environmental medium

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sea grass bed [ENVO:01000059]

characteristic: local environmental context

text: annelid metagenome

text: Population metagenomics of Olavius annelids

characteristic: project name

text: annelid metagenome

text: pyrosequencing

characteristic: sequencing method

text: OalgBEDO_H01 metagenome


characteristic: External Id

text: MAX-PLANCK INSTITUTE FOR MARINE MICROBIOLOGY, BREMEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_94 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

characteristic: organism

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_B30 metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: marine benthic biome [ENVO:01000024]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_337 from Cavoli

characteristic: description

text: shallow marine sediment [ENVO:03000034]

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_B32 metagenome


text: public

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen OC4 from Cavoli

text: shallow marine sediment [ENVO:03000034]

characteristic: environmental medium

text: Italy

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sea grass bed [ENVO:01000059]

characteristic: local environmental context

text: annelid metagenome

characteristic: project name

text: annelid metagenome

text: pyrosequencing

characteristic: sequencing method

text: OalgCAVL_C01 metagenome


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_267 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_D11 metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: marine benthic biome [ENVO:01000024]

characteristic: broad-scale environmental context

characteristic: collection date

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_302 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

characteristic: organism

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_D12 metagenome

characteristic: title


text: public

text: marine benthic biome [ENVO:01000024]

characteristic: depth

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_414 from Cavoli

characteristic: description

text: shallow marine sediment [ENVO:03000034]

characteristic: environmental medium

text: Italy

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: sea grass bed [ENVO:01000059]

characteristic: local environmental context

text: annelid metagenome

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_D13 metagenome


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_92 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

characteristic: project name

text: annelid metagenome

text: pyrosequencing

characteristic: sequencing method

text: OalgCAVL_D14 metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine benthic biome [ENVO:01000024]

characteristic: broad-scale environmental context

characteristic: collection date

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_6 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_D15 metagenome


text: public

text: marine benthic biome [ENVO:01000024]

characteristic: depth

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_254 from Cavoli

characteristic: description

text: shallow marine sediment [ENVO:03000034]

characteristic: environmental medium

text: Italy

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

characteristic: organism

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_D16 metagenome

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_278 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

characteristic: geographic location (longitude)

text: sea grass bed [ENVO:01000059]

characteristic: local environmental context

text: annelid metagenome

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_D17 metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_279 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

characteristic: project name

text: annelid metagenome

text: pyrosequencing

characteristic: sequencing method

text: OalgCAVL_D18 metagenome


text: public

text: marine benthic biome [ENVO:01000024]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_349 from Cavoli

characteristic: description

text: shallow marine sediment [ENVO:03000034]

characteristic: environmental medium

text: Italy

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_D19 metagenome


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_342 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

characteristic: organism

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_D20 metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_304A from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

characteristic: geographic location (longitude)

text: sea grass bed [ENVO:01000059]

characteristic: local environmental context

text: annelid metagenome

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_D21 metagenome


text: public

text: marine benthic biome [ENVO:01000024]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_361 from Cavoli

characteristic: description

text: shallow marine sediment [ENVO:03000034]

characteristic: environmental medium

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

characteristic: project name

text: annelid metagenome

text: pyrosequencing

characteristic: sequencing method

text: OalgCAVL_D22 metagenome


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_370 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

text: Population metagenomics of Olavius annelids

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_D23 metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: MAX-PLANCK INSTITUTE FOR MARINE MICROBIOLOGY, BREMEN

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_386 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

characteristic: organism

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_D24 metagenome

characteristic: title


text: public

text: marine benthic biome [ENVO:01000024]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_379 from Cavoli

characteristic: description

text: shallow marine sediment [ENVO:03000034]

characteristic: environmental medium

text: Italy

characteristic: geographic location (longitude)

text: sea grass bed [ENVO:01000059]

characteristic: local environmental context

text: annelid metagenome

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_D25 metagenome


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_388 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

characteristic: project name

text: annelid metagenome

text: pyrosequencing

characteristic: sequencing method

text: OalgCAVL_D26 metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_7 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_D27 metagenome


text: public

text: marine benthic biome [ENVO:01000024]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_12 from Cavoli

characteristic: description

text: shallow marine sediment [ENVO:03000034]

characteristic: environmental medium

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

characteristic: organism

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_D28 metagenome

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_36 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

characteristic: geographic location (longitude)

text: sea grass bed [ENVO:01000059]

characteristic: local environmental context

text: annelid metagenome

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_D29 metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_46 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

characteristic: project name

text: annelid metagenome

text: pyrosequencing

characteristic: sequencing method

text: OalgCAVL_D30 metagenome


text: public

text: marine benthic biome [ENVO:01000024]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_405 from Cavoli

characteristic: description

text: shallow marine sediment [ENVO:03000034]

characteristic: environmental medium

text: Italy

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_E11 metagenome


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_290 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

characteristic: organism

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_E12 metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_314 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

characteristic: geographic location (longitude)

text: sea grass bed [ENVO:01000059]

characteristic: local environmental context

text: annelid metagenome

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_E13 metagenome


text: public

text: marine benthic biome [ENVO:01000024]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_44 from Cavoli

characteristic: description

text: shallow marine sediment [ENVO:03000034]

characteristic: environmental medium

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

characteristic: project name

text: annelid metagenome

text: pyrosequencing

characteristic: sequencing method

text: OalgCAVL_E14 metagenome


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_367 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_E15 metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_256 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

characteristic: organism

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_E16 metagenome

characteristic: title


text: public

text: marine benthic biome [ENVO:01000024]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_285 from Cavoli

characteristic: description

text: shallow marine sediment [ENVO:03000034]

characteristic: environmental medium

text: Italy

characteristic: geographic location (longitude)

text: sea grass bed [ENVO:01000059]

characteristic: local environmental context

text: annelid metagenome

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_E17 metagenome


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_282 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

characteristic: project name

text: annelid metagenome

text: pyrosequencing

characteristic: sequencing method

text: OalgCAVL_E18 metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_356 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

text: Population metagenomics of Olavius annelids

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_E19 metagenome


text: MAX-PLANCK INSTITUTE FOR MARINE MICROBIOLOGY, BREMEN

text: public

text: marine benthic biome [ENVO:01000024]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_373 from Cavoli

characteristic: description

text: shallow marine sediment [ENVO:03000034]

characteristic: environmental medium

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

characteristic: organism

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_E20 metagenome

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_351 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

characteristic: geographic location (longitude)

text: sea grass bed [ENVO:01000059]

characteristic: local environmental context

text: annelid metagenome

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_E21 metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_368 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

characteristic: project name

text: annelid metagenome

text: pyrosequencing

characteristic: sequencing method

text: OalgCAVL_E22 metagenome


text: public

text: marine benthic biome [ENVO:01000024]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_400 from Cavoli

characteristic: description

text: shallow marine sediment [ENVO:03000034]

characteristic: environmental medium

text: Italy

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_E23 metagenome


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_416 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

characteristic: organism

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_E24 metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_411 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

characteristic: geographic location (longitude)

text: sea grass bed [ENVO:01000059]

characteristic: local environmental context

text: annelid metagenome

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_E25 metagenome


text: public

text: marine benthic biome [ENVO:01000024]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_304B from Cavoli

characteristic: description

text: shallow marine sediment [ENVO:03000034]

characteristic: environmental medium

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

characteristic: project name

text: annelid metagenome

text: pyrosequencing

characteristic: sequencing method

text: OalgCAVL_E26 metagenome


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_4 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_E27 metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_354 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

characteristic: organism

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_E29 metagenome

characteristic: title


text: public

text: marine benthic biome [ENVO:01000024]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_88 from Cavoli

characteristic: description

text: shallow marine sediment [ENVO:03000034]

characteristic: environmental medium

text: Italy

characteristic: geographic location (longitude)

text: sea grass bed [ENVO:01000059]

characteristic: local environmental context

text: annelid metagenome

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_E30 metagenome


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen OC10 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

characteristic: project name

text: annelid metagenome

text: pyrosequencing

characteristic: sequencing method

text: OalgCAVL_F01 metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine benthic biome [ENVO:01000024]

text: Metagenome of Olavius algarvensis specimen OC48 from Cavoli

text: shallow marine sediment [ENVO:03000034]

text: Italy

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_F02 metagenome


text: public

text: marine benthic biome [ENVO:01000024]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

text: Metagenome of Olavius algarvensis specimen Gutless_worm_Elba_Oct2016_283 from Cavoli

characteristic: description

text: shallow marine sediment [ENVO:03000034]

characteristic: environmental medium

text: Italy

text: sea grass bed [ENVO:01000059]

text: annelid metagenome

characteristic: organism

text: annelid metagenome

text: pyrosequencing

text: OalgCAVL_F11 metagenome

characteristic: title