text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

characteristic: collected by

text: University of Haifa

text: adult sponge tissue

characteristic: environmental medium

text: Israel

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Eilat

characteristic: geographic location (region and locality)

text: coral reef

characteristic: habitat

text: adult

characteristic: host life stage

text: Theonella swinhoei

characteristic: host scientific name

characteristic: host taxid

text: ILIA BURGSDORF | RINAT BAR SHALOM

characteristic: identified by

text: University of Haifa Israel

text: metagenome-assembled genome

text: Sponge: Theonella swinhoei

text: marine coral reef biome

characteristic: local environmental context

text: sponge metagenome

text: Gemmatimonadota bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Gemmatimonadota bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: 1766b9ea-3269-4cc1-97f5-695b05480569-asg-MAGScoT_cleanbin_000027


status: PUBLIC

text: Yes

tag: attribute

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

tag: Namespace:Tree of Life Programme

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); MaxBin (version 2.7)

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

text: University of Haifa

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

characteristic: contamination score

unit: m

characteristic: depth

text: adult sponge tissue

text: Israel

characteristic: geographic location (country and/or sea)

unit: DD

text: Eilat

text: coral reef

text: adult

text: Theonella swinhoei

text: ILIA BURGSDORF | RINAT BAR SHALOM

text: University of Haifa Israel

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Theonella swinhoei

text: marine coral reef biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Longimicrobiales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Longimicrobiales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

text: GTDB-TK (version 2.3.2); GTDB (release 2014)

characteristic: taxonomic classification

text: taxonomic classification defined by topology and ANI

characteristic: taxonomic identity marker

text: 1657d605-667c-4cd4-94fa-5f7303d281ff-asg-MAGScoT_cleanbin_000024

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

characteristic: collected by

text: University of Haifa

text: adult sponge tissue

characteristic: environmental medium

text: Israel

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Eilat

characteristic: geographic location (region and locality)

text: coral reef

characteristic: habitat

text: adult

characteristic: host life stage

text: Theonella swinhoei

characteristic: host scientific name

characteristic: host taxid

text: ILIA BURGSDORF | RINAT BAR SHALOM

characteristic: identified by

text: University of Haifa Israel

text: metagenome-assembled genome

text: Sponge: Theonella swinhoei

text: marine coral reef biome

characteristic: local environmental context

text: sponge metagenome

text: Longimicrobiales bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Longimicrobiales bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: 5c038fdb-8e0b-4cbd-9550-43be1afc0bbf-asg-MAGScoT_cleanbin_000026


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

text: University of Haifa

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult sponge tissue

text: Israel

characteristic: geographic location (country and/or sea)

text: Eilat

text: coral reef

text: adult

text: Theonella swinhoei

text: ILIA BURGSDORF | RINAT BAR SHALOM

text: University of Haifa Israel

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Theonella swinhoei

text: marine coral reef biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Nitrosopumilaceae archaeon

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Nitrosopumilaceae archaeon

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: fffc057b-369a-431a-97bf-40e39b5bab9e-asg-MAGScoT_cleanbin_000158

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

characteristic: collected by

text: University of Haifa

text: adult sponge tissue

characteristic: environmental medium

text: Israel

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Eilat

characteristic: geographic location (region and locality)

text: coral reef

characteristic: habitat

text: adult

characteristic: host life stage

text: Theonella swinhoei

characteristic: host scientific name

characteristic: host taxid

text: ILIA BURGSDORF | RINAT BAR SHALOM

characteristic: identified by

text: University of Haifa Israel

text: metagenome-assembled genome

text: Sponge: Theonella swinhoei

text: marine coral reef biome

characteristic: local environmental context

text: sponge metagenome

text: Nitrosopumilaceae archaeon

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Nitrosopumilaceae archaeon

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: 679b85a9-901a-4549-bbbb-e934c43a20cf-asg-MAGScoT_cleanbin_000162


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

text: University of Haifa

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult sponge tissue

text: Israel

characteristic: geographic location (country and/or sea)

text: Eilat

text: coral reef

text: adult

text: Theonella swinhoei

text: ILIA BURGSDORF | RINAT BAR SHALOM

text: University of Haifa Israel

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Theonella swinhoei

text: marine coral reef biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Opitutales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Opitutales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic novelty determined using RED

characteristic: taxonomic identity marker

text: e4292735-b3b5-42df-bce3-ad3ef7a88f44-asg-MAGScoT_cleanbin_000084

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

characteristic: collected by

text: University of Haifa

text: adult sponge tissue

characteristic: environmental medium

text: Israel

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Eilat

characteristic: geographic location (region and locality)

text: coral reef

characteristic: habitat

text: adult

characteristic: host life stage

text: Theonella swinhoei

characteristic: host scientific name

characteristic: host taxid

text: ILIA BURGSDORF | RINAT BAR SHALOM

characteristic: identified by

text: University of Haifa Israel

text: metagenome-assembled genome

text: Sponge: Theonella swinhoei

text: marine coral reef biome

characteristic: local environmental context

text: sponge metagenome

text: Paracoccaceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Paracoccaceae bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: 4cdb1b34-29e2-49c8-9f17-49d5e6017733-asg-MAGScoT_cleanbin_000053


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

text: University of Haifa

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult sponge tissue

text: Israel

characteristic: geographic location (country and/or sea)

text: Eilat

text: coral reef

text: adult

text: Theonella swinhoei

text: ILIA BURGSDORF | RINAT BAR SHALOM

text: University of Haifa Israel

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Theonella swinhoei

text: marine coral reef biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Paracoccaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Paracoccaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: e121fc68-17be-4000-b8c3-be365e4aa48a-asg-MAGScoT_cleanbin_000014

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

characteristic: collected by

text: University of Haifa

text: adult sponge tissue

characteristic: environmental medium

text: Israel

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Eilat

characteristic: geographic location (region and locality)

text: coral reef

characteristic: habitat

text: adult

characteristic: host life stage

text: Theonella swinhoei

characteristic: host scientific name

characteristic: host taxid

text: ILIA BURGSDORF | RINAT BAR SHALOM

characteristic: identified by

text: University of Haifa Israel

text: metagenome-assembled genome

text: Sponge: Theonella swinhoei

text: marine coral reef biome

characteristic: local environmental context

text: sponge metagenome

text: Pseudomonadales bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Pseudomonadales bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: e958075d-7ee5-44b9-87ba-8c9210635fca-asg-MAGScoT_cleanbin_000011


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

text: University of Haifa

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult sponge tissue

text: Israel

characteristic: geographic location (country and/or sea)

text: Eilat

text: coral reef

text: adult

text: Theonella swinhoei

text: ILIA BURGSDORF | RINAT BAR SHALOM

text: University of Haifa Israel

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Theonella swinhoei

text: marine coral reef biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Pseudomonadales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Pseudomonadales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 93f608da-4359-4028-81e3-666eefb89598-asg-MAGScoT_cleanbin_000002

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

characteristic: collected by

text: University of Haifa

text: adult sponge tissue

characteristic: environmental medium

text: Israel

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Eilat

characteristic: geographic location (region and locality)

text: coral reef

characteristic: habitat

text: adult

characteristic: host life stage

text: Theonella swinhoei

characteristic: host scientific name

characteristic: host taxid

text: ILIA BURGSDORF | RINAT BAR SHALOM

characteristic: identified by

text: University of Haifa Israel

text: metagenome-assembled genome

text: Sponge: Theonella swinhoei

text: marine coral reef biome

characteristic: local environmental context

text: sponge metagenome

text: Rhodothermales bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Rhodothermales bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: dfa80fe1-3418-4a7a-9107-99a60459722b-asg-MAGScoT_cleanbin_000009


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

text: University of Haifa

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult sponge tissue

text: Israel

characteristic: geographic location (country and/or sea)

text: Eilat

text: coral reef

text: adult

text: Theonella swinhoei

text: ILIA BURGSDORF | RINAT BAR SHALOM

text: University of Haifa Israel

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Theonella swinhoei

text: marine coral reef biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Rhodothermales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Rhodothermales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 9cc831bd-bc70-4893-94b0-cd5ea3f684b8-asg-MAGScoT_cleanbin_000028

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

characteristic: collected by

text: University of Haifa

text: adult sponge tissue

characteristic: environmental medium

text: Israel

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Eilat

characteristic: geographic location (region and locality)

text: coral reef

characteristic: habitat

text: adult

characteristic: host life stage

text: Theonella swinhoei

characteristic: host scientific name

characteristic: host taxid

text: ILIA BURGSDORF | RINAT BAR SHALOM

characteristic: identified by

text: University of Haifa Israel

text: metagenome-assembled genome

text: Sponge: Theonella swinhoei

text: marine coral reef biome

characteristic: local environmental context

text: sponge metagenome

text: Spirochaetia bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Spirochaetia bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: 65460407-d738-4661-97af-02a88c6845d9-asg-MAGScoT_cleanbin_000079


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); MaxBin (version 2.7)

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

text: University of Haifa

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult sponge tissue

text: Israel

characteristic: geographic location (country and/or sea)

text: Eilat

text: coral reef

text: adult

text: Theonella swinhoei

text: ILIA BURGSDORF | RINAT BAR SHALOM

text: University of Haifa Israel

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Theonella swinhoei

text: marine coral reef biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Tepidiformaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Tepidiformaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: ddb3cf28-bb63-44a4-8fd1-08202229d10a-asg-MAGScoT_cleanbin_000035

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

characteristic: collected by

text: University of Haifa

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

text: adult sponge tissue

characteristic: environmental medium

text: Israel

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Eilat

characteristic: geographic location (region and locality)

text: coral reef

characteristic: habitat

text: adult

characteristic: host life stage

text: Theonella swinhoei

characteristic: host scientific name

characteristic: host taxid

text: ILIA BURGSDORF | RINAT BAR SHALOM

characteristic: identified by

text: University of Haifa Israel

text: metagenome-assembled genome

text: Sponge: Theonella swinhoei

text: marine coral reef biome

characteristic: local environmental context

text: sponge metagenome

text: Thermoanaerobaculia bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Thermoanaerobaculia bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: GTDB-TK (version 2.3.2); GTDB (release 2014)

text: 0db66e92-d31a-4200-8262-fff8455c21c0-asg-MAGScoT_cleanbin_000030


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

text: University of Haifa

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult sponge tissue

text: Israel

characteristic: geographic location (country and/or sea)

text: Eilat

text: coral reef

text: adult

text: Theonella swinhoei

text: ILIA BURGSDORF | RINAT BAR SHALOM

text: University of Haifa Israel

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Theonella swinhoei

text: marine coral reef biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Thermodesulfobacteriota bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Thermodesulfobacteriota bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic classification defined by topology and ANI

characteristic: taxonomic identity marker

text: 21442c6b-cc68-4f82-8039-a5361455a999-asg-MAGScoT_cleanbin_000037

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

characteristic: collected by

text: University of Haifa

text: adult sponge tissue

characteristic: environmental medium

text: Israel

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Eilat

characteristic: geographic location (region and locality)

text: coral reef

characteristic: habitat

text: adult

characteristic: host life stage

text: Theonella swinhoei

characteristic: host scientific name

characteristic: host taxid

text: ILIA BURGSDORF | RINAT BAR SHALOM

characteristic: identified by

text: University of Haifa Israel

text: metagenome-assembled genome

text: Sponge: Theonella swinhoei

text: marine coral reef biome

characteristic: local environmental context

text: sponge metagenome

text: Thermodesulfobacteriota bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Thermodesulfobacteriota bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: 564989d4-0a31-48dd-8468-51938819ad86-asg-MAGScoT_cleanbin_000005


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

text: University of Haifa

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult sponge tissue

text: Israel

characteristic: geographic location (country and/or sea)

text: Eilat

text: coral reef

text: adult

text: Theonella swinhoei

text: ILIA BURGSDORF | RINAT BAR SHALOM

text: University of Haifa Israel

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Theonella swinhoei

text: marine coral reef biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Thermodesulfobacteriota bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Thermodesulfobacteriota bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: c78cfef9-89c4-44c9-956d-f6b471e4c892-asg-MAGScoT_cleanbin_000012

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

characteristic: collected by

text: University of Haifa

text: adult sponge tissue

characteristic: environmental medium

text: Israel

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Eilat

characteristic: geographic location (region and locality)

text: coral reef

characteristic: habitat

text: adult

characteristic: host life stage

text: Theonella swinhoei

characteristic: host scientific name

characteristic: host taxid

text: ILIA BURGSDORF | RINAT BAR SHALOM

characteristic: identified by

text: University of Haifa Israel

text: metagenome-assembled genome

text: Sponge: Theonella swinhoei

text: marine coral reef biome

characteristic: local environmental context

text: sponge metagenome

text: Thermodesulfobacteriota bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Thermodesulfobacteriota bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: 4e20cc59-495a-4000-abf0-89ce236daca8-asg-MAGScoT_cleanbin_000078


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

text: University of Haifa

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult sponge tissue

text: Israel

characteristic: geographic location (country and/or sea)

text: Eilat

text: coral reef

text: adult

text: Theonella swinhoei

text: ILIA BURGSDORF | RINAT BAR SHALOM

text: University of Haifa Israel

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Theonella swinhoei

text: marine coral reef biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Vicinamibacterales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Vicinamibacterales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic novelty determined using RED

characteristic: taxonomic identity marker

text: 0ce2d42f-2bf0-44bc-a671-070680eb922c-asg-MAGScoT_cleanbin_000013

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

characteristic: collected by

text: University of Haifa

text: adult sponge tissue

characteristic: environmental medium

text: Israel

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Eilat

characteristic: geographic location (region and locality)

text: coral reef

characteristic: habitat

text: adult

characteristic: host life stage

text: Theonella swinhoei

characteristic: host scientific name

characteristic: host taxid

text: ILIA BURGSDORF | RINAT BAR SHALOM

characteristic: identified by

text: University of Haifa Israel

text: metagenome-assembled genome

text: Sponge: Theonella swinhoei

text: marine coral reef biome

characteristic: local environmental context

text: sponge metagenome

text: Vicinamibacterales bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample derived from

text: Vicinamibacterales bacterium

text: Pacbio Sequel II

characteristic: specimen id

text: NOT PROVIDED

characteristic: specimen voucher

text: PROKKA (version 1.14.5)

text: d5a9b4ee-eb88-4731-bb2c-80bf662b4d04-asg-MAGScoT_cleanbin_000006


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Geomar Helmholtz Centre

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: MAYA BRITSTEIN

text: University of Haifa

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult sponge tissue

text: Israel

characteristic: geographic location (country and/or sea)

text: Eilat

text: coral reef

text: adult

text: Theonella swinhoei

text: ILIA BURGSDORF | RINAT BAR SHALOM

text: University of Haifa Israel

text: metagenome-assembled genome

characteristic: investigation type

text: Sponge: Theonella swinhoei

text: marine coral reef biome

text: sponge metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Vicinamibacteria bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Vicinamibacteria bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: NOT PROVIDED

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: f5636fb4-303b-4095-abf0-868cc3675b90-asg-MAGScoT_cleanbin_000057

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Rhode Island

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: aquatic biome

characteristic: broad-scale environmental context

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: 1902-12-07 00:00:00.000

text: adult bivalve tissue

characteristic: environmental medium

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: MISSISSIPPI CANYON

characteristic: geographic location (region and locality)

text: Cold seep

characteristic: habitat

text: adult

characteristic: host life stage

text: Bathymodiolus brooksi

characteristic: host scientific name

text: not collected

characteristic: host sex

characteristic: host taxid

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: marine cold seep biome

characteristic: local environmental context

text: mollusc metagenome

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

text: Collected with remotely operated vehicle ROV JASON

characteristic: sample collection device or method

characteristic: sample derived from

text: mollusc metagenome

text: 9f246675-a293-47bc-bfb0-b94cb944fd50-asg-metagenome

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Rhode Island

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

text: MetaBat (version 2.15-15-gd6ea400); DASTOOL (version 1.1.5)

characteristic: binning software

text: aquatic biome

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: 1902-12-07 00:00:00.000

characteristic: depth

text: adult bivalve tissue

text: USA

characteristic: geographic location (country and/or sea)

text: MISSISSIPPI CANYON

text: Cold seep

text: adult

text: Bathymodiolus brooksi

text: not collected

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Bivalve: Bathymodiolus brooksi

text: marine cold seep biome

text: mollusc metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Sulfurovaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Sulfurovaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

text: GTDB-TK (version 2.3.2); GTDB (release 214)

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: a0d49e63-047c-41ad-9bb4-fced91459517-asg-bin.904


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Rhode Island

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

text: aquatic biome

characteristic: broad-scale environmental context

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

text: 1902-12-07 00:00:00.000

text: adult bivalve tissue

characteristic: environmental medium

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: MISSISSIPPI CANYON

characteristic: geographic location (region and locality)

text: Cold seep

characteristic: habitat

text: adult

characteristic: host life stage

text: Bathymodiolus brooksi

characteristic: host scientific name

text: not collected

characteristic: host sex

characteristic: host taxid

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Bivalve: Bathymodiolus brooksi

text: marine cold seep biome

characteristic: local environmental context

text: mollusc metagenome

text: Candidatus Thiodubiliella sp.

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample collection device or method

characteristic: sample derived from

text: Candidatus Thiodubiliella sp.

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: c5b1ccca-0022-4292-ad40-6c433f50660e-asg-bin.2


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Rhode Island

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph

characteristic: binning software

text: aquatic biome

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: 1902-12-07 00:00:00.000

characteristic: depth

text: adult bivalve tissue

text: USA

characteristic: geographic location (country and/or sea)

text: MISSISSIPPI CANYON

text: Cold seep

text: adult

text: Bathymodiolus brooksi

text: not collected

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Bivalve: Bathymodiolus brooksi

text: marine cold seep biome

text: mollusc metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Psychromonas sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: uncultured Psychromonas sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: a91dbc3e-702d-42bd-9e06-0a323c647f35-asg-bin.4


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Rhode Island

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

text: aquatic biome

characteristic: broad-scale environmental context

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: 1902-12-07 00:00:00.000

text: adult bivalve tissue

characteristic: environmental medium

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: MISSISSIPPI CANYON

characteristic: geographic location (region and locality)

text: Cold seep

characteristic: habitat

text: adult

characteristic: host life stage

text: Bathymodiolus brooksi

characteristic: host scientific name

text: not collected

characteristic: host sex

characteristic: host taxid

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Bivalve: Bathymodiolus brooksi

text: marine cold seep biome

characteristic: local environmental context

text: mollusc metagenome

text: Methyloprofundus sp.

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample collection device or method

characteristic: sample derived from

text: Methyloprofundus sp.

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: 96d63388-5640-4ae1-9c1f-8b6c0c049979-asg-bin.1


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Rhode Island

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph

characteristic: binning software

text: aquatic biome

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: 1902-12-07 00:00:00.000

characteristic: depth

text: adult bivalve tissue

text: USA

characteristic: geographic location (country and/or sea)

text: MISSISSIPPI CANYON

text: Cold seep

text: adult

text: Bathymodiolus brooksi

text: not collected

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Bivalve: Bathymodiolus brooksi

text: marine cold seep biome

text: mollusc metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Candidatus Thiodubiliella sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Candidatus Thiodubiliella sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: e076d8e5-72c3-4629-9f5b-69587cc203f0-asg-bin.3


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Rhode Island

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: aquatic biome

characteristic: broad-scale environmental context

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: 1905-11-06 21:24:28.800

text: adult gastropod tissue

characteristic: environmental medium

text: Tonga

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: ABE VENT FIELD

characteristic: geographic location (region and locality)

text: Hydrothermal vent

characteristic: habitat

text: adult

characteristic: host life stage

text: Alviniconcha kojimai

characteristic: host scientific name

text: not collected

characteristic: host sex

characteristic: host taxid

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: marine hydrothermal vent biome

characteristic: local environmental context

text: mollusc metagenome

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample collection device or method

characteristic: sample derived from

text: mollusc metagenome

text: 40c3d78a-7656-4f80-ace3-5e21c50ff617-asg-metagenome

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Rhode Island

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); MaxBin (version 2.7)

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: 1905-11-06 21:24:28.800

characteristic: depth

text: adult gastropod tissue

text: Tonga

characteristic: geographic location (country and/or sea)

text: ABE VENT FIELD

text: Hydrothermal vent

text: adult

text: Alviniconcha kojimai

text: not collected

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Gastropod: Alviniconcha kojimai

text: marine hydrothermal vent biome

text: mollusc metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Rhodococcus qingshengii

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Rhodococcus qingshengii

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 7ba59165-5c1f-4397-b58e-9ea0dd25a62b-asg-MAGScoT_cleanbin_000003


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Rhode Island

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: 1905-11-06 21:24:28.800

text: adult gastropod tissue

characteristic: environmental medium

text: Tonga

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: ABE VENT FIELD

characteristic: geographic location (region and locality)

text: Hydrothermal vent

characteristic: habitat

text: adult

characteristic: host life stage

text: Alviniconcha kojimai

characteristic: host scientific name

text: not collected

characteristic: host sex

characteristic: host taxid

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Gastropod: Alviniconcha kojimai

text: marine hydrothermal vent biome

characteristic: local environmental context

text: mollusc metagenome

text: Gammaproteobacteria bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample collection device or method

characteristic: sample derived from

text: Gammaproteobacteria bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: d19ebe49-ede0-44aa-854b-3899d8650d75-asg-MAGScoT_cleanbin_000005


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Rhode Island

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph

text: aquatic biome

characteristic: broad-scale environmental context

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: 1905-11-06 21:24:28.800

characteristic: depth

text: adult gastropod tissue

text: Tonga

characteristic: geographic location (country and/or sea)

text: ABE VENT FIELD

text: Hydrothermal vent

text: adult

text: Alviniconcha kojimai

text: not collected

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Gastropod: Alviniconcha kojimai

text: marine hydrothermal vent biome

text: mollusc metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Endozoicomonas sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Endozoicomonas sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: ANI

characteristic: taxonomic identity marker

text: ca58fef7-8691-4a40-ae61-9d88f0de4747-asg-MAGScoT_cleanbin_000002


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Rhode Island

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: 1905-11-06 21:24:28.800

text: adult gastropod tissue

characteristic: environmental medium

text: Tonga

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: ABE VENT FIELD

characteristic: geographic location (region and locality)

text: Hydrothermal vent

characteristic: habitat

text: adult

characteristic: host life stage

text: Alviniconcha kojimai

characteristic: host scientific name

text: not collected

characteristic: host sex

characteristic: host taxid

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Gastropod: Alviniconcha kojimai

text: marine hydrothermal vent biome

characteristic: local environmental context

text: mollusc metagenome

text: Gammaproteobacteria bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

text: Collected with remotely operated vehicle ROV JASON

characteristic: sample collection device or method

characteristic: sample derived from

text: Gammaproteobacteria bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: 99eaebf8-0e01-45e1-9b83-b2bbc74163d4-asg-MAGScoT_cleanbin_000001


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Rhode Island

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: aquatic biome

characteristic: broad-scale environmental context

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

text: 1905-03-03 22:27:50.400

characteristic: depth

text: adult gastropod tissue

text: Tonga

characteristic: geographic location (country and/or sea)

text: TU'I MALILA VENT FIELD

text: Hydrothermal vent

text: adult

text: Alviniconcha strummeri

text: not collected

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: marine hydrothermal vent biome

text: mollusc metagenome

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: mollusc metagenome

text: 01986f09-c384-4a10-9118-18c48d1a4918-asg-metagenome

characteristic: title

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Rhode Island

text: NOT PROVIDED

text: Tree of Life Programme

text: public

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

text: coverage; graph

characteristic: binning parameters

text: DASTOOL (version 1.1.5); MetaBat (version 2.15-15-gd6ea400); MaxBin (version 2.7)

characteristic: binning software

text: aquatic biome

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: 1905-03-03 22:27:50.400

text: adult gastropod tissue

characteristic: environmental medium

text: Tonga

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: TU'I MALILA VENT FIELD

characteristic: geographic location (region and locality)

text: Hydrothermal vent

characteristic: habitat

text: adult

characteristic: host life stage

text: Alviniconcha strummeri

characteristic: host scientific name

text: not collected

characteristic: host sex

characteristic: host taxid

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Gastropod: Alviniconcha strummeri

text: marine hydrothermal vent biome

characteristic: local environmental context

text: mollusc metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Mycoplasmatales bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample collection device or method

characteristic: sample derived from

text: Mycoplasmatales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic classification defined by topology and ANI

characteristic: taxonomic identity marker

text: bd16f859-b669-4b2e-b826-09c94f73c46f-asg-bin.46


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Rhode Island

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

characteristic: contamination score

text: 1905-03-03 22:27:50.400

characteristic: depth

text: adult gastropod tissue

characteristic: environmental medium

text: Tonga

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: TU'I MALILA VENT FIELD

characteristic: geographic location (region and locality)

text: Hydrothermal vent

characteristic: habitat

text: adult

text: Alviniconcha strummeri

text: not collected

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Gastropod: Alviniconcha strummeri

text: marine hydrothermal vent biome

text: mollusc metagenome

text: Endozoicomonas sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Endozoicomonas sp.

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: GTDB-TK (version 2.3.2); GTDB (release 214)

text: ANI

text: d83a2dcb-908e-4ad7-8f0b-d78f35901ce8-asg-bin.10


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Rhode Island

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph

text: aquatic biome

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: 1905-03-03 22:27:50.400

text: adult gastropod tissue

text: Tonga

text: TU'I MALILA VENT FIELD

text: Hydrothermal vent

text: adult

characteristic: host life stage

text: Alviniconcha strummeri

characteristic: host scientific name

text: not collected

characteristic: host sex

characteristic: host taxid

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Gastropod: Alviniconcha strummeri

text: marine hydrothermal vent biome

characteristic: local environmental context

text: mollusc metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Kistimonas sp.

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample collection device or method

characteristic: sample derived from

text: Kistimonas sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: ANI

characteristic: taxonomic identity marker

text: 5ab06fb3-fe30-418d-9088-6042a3ad4bc1-asg-bin.39


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Rhode Island

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: 1905-03-03 22:27:50.400

characteristic: depth

text: adult gastropod tissue

characteristic: environmental medium

text: Tonga

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: TU'I MALILA VENT FIELD

characteristic: geographic location (region and locality)

text: Hydrothermal vent

characteristic: habitat

text: adult

text: Alviniconcha strummeri

text: not collected

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Gastropod: Alviniconcha strummeri

text: marine hydrothermal vent biome

text: mollusc metagenome

text: Kistimonas sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Kistimonas sp.

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: ANI

text: 2a7bf075-7e48-45a6-af3f-cb519be8239d-asg-maxbin2.004


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Rhode Island

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph

text: aquatic biome

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: 1905-03-03 22:27:50.400

text: adult gastropod tissue

text: Tonga

text: TU'I MALILA VENT FIELD

text: Hydrothermal vent

text: adult

characteristic: host life stage

text: Alviniconcha strummeri

characteristic: host scientific name

text: not collected

characteristic: host sex

characteristic: host taxid

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Gastropod: Alviniconcha strummeri

text: marine hydrothermal vent biome

characteristic: local environmental context

text: mollusc metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Rhodococcus qingshengii

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample collection device or method

characteristic: sample derived from

text: Rhodococcus qingshengii

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 92cca394-b5e9-4088-9349-4ad9b1cbd129-asg-bin.97


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Rhode Island

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: 1905-03-03 22:27:50.400

characteristic: depth

text: adult gastropod tissue

characteristic: environmental medium

text: Tonga

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: TU'I MALILA VENT FIELD

characteristic: geographic location (region and locality)

text: Hydrothermal vent

characteristic: habitat

text: adult

text: Alviniconcha strummeri

text: not collected

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

text: Gastropod: Alviniconcha strummeri

text: marine hydrothermal vent biome

text: mollusc metagenome

text: Mycoplasmatales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

text: Mycoplasmatales bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: 250c9514-7736-4d95-b141-2db6cdbdfc3c-asg-bin.86


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Rhode Island

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF RHODE ISLAND

characteristic: barcoding center

text: coverage; graph

text: aquatic biome

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: 1905-03-03 22:27:50.400

text: adult gastropod tissue

text: Tonga

text: TU'I MALILA VENT FIELD

text: Hydrothermal vent

text: adult

characteristic: host life stage

text: Alviniconcha strummeri

characteristic: host scientific name

text: not collected

characteristic: host sex

characteristic: host taxid

text: ROXANNE BEINART

text: UNIVERSITY OF RHODE ISLAND

text: metagenome-assembled genome

characteristic: investigation type

text: Gastropod: Alviniconcha strummeri

text: marine hydrothermal vent biome

characteristic: local environmental context

text: mollusc metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Gammaproteobacteria bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: project name

characteristic: sample collection device or method

characteristic: sample derived from

text: Gammaproteobacteria bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 457aa983-13f5-4761-8b96-2d70fbf5bd89-asg-maxbin2.001


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

characteristic: Submitter Id

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Sjaelland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

text: Human

text: n_infections=2,last_infection_date=2021-03-22

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided


text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Sjaelland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Department of Clinical Microbiology, Odense University Hospital, Odense, Denmark

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Molekylær Medicinsk Afdeling, Aarhus University Hospital, Aarhus, Denmark

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Midtjylland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-10-17

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

text: n_infections=2,last_infection_date=2022-01-10

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Syddanmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-02-28

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Midtjylland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-01-24

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-343206/2022

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

text: n_infections=2,last_infection_date=2022-02-07

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Syddanmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-02-21

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

text: n_infections=2,last_infection_date=2022-02-14

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Sjaelland

text: Human

text: n_infections=2,last_infection_date=2022-07-11

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-03-21

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

text: Human

text: n_infections=3,last_infection_date=2022-01-17

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Sjaelland

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-528576/2022

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak