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text: Ocean water

text: Pacific Ocean

text: metagenome

text: ocean water

text: marine metagenome

text: marine metagenome

characteristic: organism

text: marine metagenome

text: Illumina

characteristic: title


text: ETH ZURICH

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text: public

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characteristic: SRA accession

characteristic: Submitter Id

text: spades.py --meta

characteristic: assembly software

characteristic: binning parameters

text: metagenomic bin from biosample SAMEA2622376

text: Ocean water

text: Ocean water

characteristic: environment (feature)

text: Ocean water

characteristic: environment (material)

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: ocean water

text: marine metagenome

text: marine metagenome

text: marine metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ETH ZURICH

characteristic: INSDC center name

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text: public

text: spades.py --meta

text: metagenomic bin from biosample SAMEA4398296

text: Ocean water

text: Ocean water

text: Ocean water

text: Arctic Ocean

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characteristic: investigation type

text: ocean water

text: marine metagenome

characteristic: metagenomic source

text: marine metagenome

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text: ETH ZURICH

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text: spades.py --meta

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text: metagenomic bin from biosample SAMN07136711

characteristic: description

text: Ocean water

characteristic: environment (biome)

text: Ocean water

text: Ocean water

text: Atlantic Ocean

text: metagenome

text: ocean water

text: marine metagenome

text: marine metagenome

characteristic: organism

text: marine metagenome

text: Illumina

characteristic: title


characteristic: ENA-CHECKLIST

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text: ETH ZURICH

characteristic: INSDC center name

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text: public

text: spades.py --meta

text: metagenomic bin from biosample SAMEA2619667

text: Ocean water

text: Ocean water

characteristic: environment (feature)

text: Ocean water

characteristic: environment (material)

text: Mediterranean Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: ocean water

text: marine metagenome

text: marine metagenome

text: Biosynthetic potential of the global ocean microbiome

text: marine metagenome

text: Illumina


text: ETH ZURICH

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text: public

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text: Ocean water

text: Ocean water

text: Ocean water

text: Pacific Ocean

text: metagenome

characteristic: investigation type

text: ocean water

text: marine metagenome

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text: marine metagenome

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characteristic: sequencing method


characteristic: ENA-CHECKLIST

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text: ETH ZURICH

characteristic: INSDC center name

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text: public

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text: metagenomic bin from biosample SAMEA2623756

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text: Ocean water

characteristic: environment (biome)

text: Ocean water

text: Ocean water

text: Atlantic Ocean

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text: marine metagenome

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text: ETH ZURICH

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text: spades.py --meta

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characteristic: binning parameters

text: metagenomic bin from biosample SAMEA2620828

text: Ocean water

text: Ocean water

characteristic: environment (feature)

text: Ocean water

characteristic: environment (material)

text: Indian Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: ocean water

text: marine metagenome

text: marine metagenome

text: marine metagenome

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characteristic: ENA-CHECKLIST

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characteristic: External Id

text: ETH ZURICH

characteristic: INSDC center name

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text: public

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text: metagenomic bin from biosample SAMEA2621013

text: Ocean water

text: Ocean water

text: Ocean water

text: Atlantic Ocean

text: metagenome

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text: ocean water

text: marine metagenome

characteristic: metagenomic source

text: marine metagenome

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text: metagenomic bin from biosample SAMEA4397930

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text: Ocean water

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text: Ocean water

text: Ocean water

text: Arctic Ocean

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text: marine metagenome

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text: marine metagenome

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characteristic: ENA-CHECKLIST

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text: public

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text: metagenomic bin from biosample SAMEA4397842

text: Ocean water

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characteristic: environment (feature)

text: Ocean water

characteristic: environment (material)

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

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text: metagenome

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characteristic: SRA accession

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text: spades.py --meta

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text: metagenomic bin from biosample SAMEA4397363

text: Ocean water

text: Ocean water

text: Ocean water

text: Arctic Ocean

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text: ocean water

text: marine metagenome

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text: public

text: spades.py --meta

characteristic: binning software

text: metagenomic bin from biosample SAMEA4397072

characteristic: description

text: Ocean water

characteristic: environment (biome)

text: Ocean water

text: Ocean water

text: Arctic Ocean

text: metagenome

text: ocean water

text: marine metagenome

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characteristic: organism

text: marine metagenome

text: Illumina

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text: ETH ZURICH

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text: spades.py --meta

characteristic: assembly software

characteristic: binning parameters

text: metagenomic bin from biosample SAMEA2591122

text: Ocean water

text: Ocean water

characteristic: environment (feature)

text: Ocean water

characteristic: environment (material)

text: Mediterranean Sea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: ocean water

text: marine metagenome

text: marine metagenome

text: marine metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

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text: ETH ZURICH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: spades.py --meta

text: tetra-nucleotide frequencies and co-abundance, --minContig 2000 --maxEdges 500

text: metagenomic bin from biosample SAMEA2622119

text: Ocean water

text: Ocean water

text: Ocean water

text: Pacific Ocean

text: metagenome

characteristic: investigation type

text: ocean water

text: marine metagenome

characteristic: metagenomic source

text: marine metagenome

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text: ETH ZURICH

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text: spades.py --meta

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text: metagenomic bin from biosample SAMEA2620097

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text: Ocean water

characteristic: environment (biome)

text: Ocean water

text: Ocean water

text: Indian Ocean

text: metagenome

text: ocean water

text: marine metagenome

text: marine metagenome

characteristic: organism

text: marine metagenome

text: Illumina

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characteristic: ENA-CHECKLIST

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text: ETH ZURICH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: spades.py --meta

text: metagenomic bin from biosample SAMEA2622219

text: Ocean water

text: Ocean water

characteristic: environment (feature)

text: Ocean water

characteristic: environment (material)

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: ocean water

text: marine metagenome

text: marine metagenome

text: marine metagenome

text: Illumina


text: ETH ZURICH

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characteristic: SRA accession

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text: spades.py --meta

characteristic: assembly software

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text: metagenomic bin from biosample SAMN07137120

text: Ocean water

text: Ocean water

text: Ocean water

text: Atlantic Ocean

text: metagenome

characteristic: investigation type

text: ocean water

text: marine metagenome

characteristic: metagenomic source

text: marine metagenome

characteristic: project name

characteristic: sample derived from

text: marine metagenome

text: Illumina

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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text: ETH ZURICH

characteristic: INSDC center name

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text: public

text: spades.py --meta

characteristic: binning software

text: metagenomic bin from biosample SAMN07136809

characteristic: description

text: Ocean water

characteristic: environment (biome)

text: Ocean water

text: Ocean water

text: Pacific Ocean

text: metagenome

text: ocean water

text: marine metagenome

text: marine metagenome

characteristic: organism

text: marine metagenome

text: Illumina

characteristic: title


text: ETH ZURICH

characteristic: INSDC last update

text: public

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characteristic: SRA accession

characteristic: Submitter Id

text: spades.py --meta

characteristic: assembly software

characteristic: binning parameters

text: metagenomic bin from biosample SAMEA2622738

text: Ocean water

text: Ocean water

characteristic: environment (feature)

text: Ocean water

characteristic: environment (material)

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: ocean water

text: marine metagenome

text: marine metagenome

text: marine metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

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text: ETH ZURICH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: spades.py --meta

text: metagenomic bin from biosample SAMEA4398315

text: Ocean water

text: Ocean water

text: Ocean water

text: Arctic Ocean

text: metagenome

characteristic: investigation type

text: ocean water

text: marine metagenome

characteristic: metagenomic source

text: marine metagenome

text: Biosynthetic potential of the global ocean microbiome

characteristic: project name

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text: marine metagenome

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text: ETH ZURICH

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characteristic: SRA accession

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text: spades.py --meta

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text: metagenomic bin from biosample SAMEA2623116

characteristic: description

text: Ocean water

characteristic: environment (biome)

text: Ocean water

text: Ocean water

text: Pacific Ocean

text: metagenome

text: ocean water

text: marine metagenome

text: marine metagenome

characteristic: organism

text: marine metagenome

text: Illumina

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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text: ETH ZURICH

characteristic: INSDC center name

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text: public

text: spades.py --meta

text: metagenomic bin from biosample SAMN07137092

text: Ocean water

text: Ocean water

characteristic: environment (feature)

text: Ocean water

characteristic: environment (material)

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: ocean water

text: marine metagenome

text: marine metagenome

text: marine metagenome

text: Illumina


text: ETH ZURICH

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text: Ocean water

text: Ocean water

text: Arctic Ocean

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characteristic: investigation type

text: ocean water

text: marine metagenome

characteristic: metagenomic source

text: marine metagenome

characteristic: project name

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text: marine metagenome

text: Illumina

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text: ETH ZURICH

characteristic: INSDC center name

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text: public

text: spades.py --meta

characteristic: binning software

text: metagenomic bin from biosample SAMEA2622518

characteristic: description

text: Ocean water

characteristic: environment (biome)

text: Ocean water

text: Ocean water

text: Pacific Ocean

text: metagenome

text: ocean water

text: marine metagenome

text: marine metagenome

characteristic: organism

text: marine metagenome

text: Illumina

characteristic: title


text: ETH ZURICH

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text: public

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characteristic: SRA accession

characteristic: Submitter Id

text: spades.py --meta

characteristic: assembly software

characteristic: binning parameters

text: metagenomic bin from biosample SAMEA4397330

text: Ocean water

text: Ocean water

characteristic: environment (feature)

text: Ocean water

characteristic: environment (material)

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: ocean water

text: marine metagenome

text: marine metagenome

text: marine metagenome

text: Illumina


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: agroparistech

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text: public

unit: day

characteristic: age

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characteristic: broker name

text: thale cress

characteristic: common name

characteristic: cultivar

text: Protocols: Shoot and root samples were seperated using a scalpel. Seedlings were grown in vitro on plates in growth chamber (16h light/8h dark, average light intensity: 1500 lux). Seeds were directly stratified on growth medium (equivalent halh MS + 1% sucrose) for \" days at 4°C, in the dark. Medium was supplemented with either DMSO (0.01% final concentration, control condition) or tunicamycin (final concentration: 100ng/mL, treatment conditions). Total RNA were extracted using the RNeasy Plant Mini kit (#74904, QIAGEN) following manufacturer's instructions. Five µg of total RNA were then treated with Dnase I (RNase-free, EN0525, Fisher, Thermoscientific). DNase I was heat inactivated and treated RNA were precipitated using lithium chloride. Quality of chosen RNA samples to be sequenced was checked using bioanalyzer. RNA samples prepared from shoots displayed RIN values ranging from 6.7 to 7.3 and a ratio RNA 28S/RNA 18S ranging from 1.5 to 1.7. RNA samples prepared from roots displayed RIN values ranging from 7.7 to 10 and a ratio RNA 28S/RNA 18S ranging from 1.7 to 2.1. 1. Take a certain amount of total RNA samples, and use oligo dT beads to enrich mRNA with poly A tail; 2. mRNA molecules were fragmented into small pieces; 3. The fragmented mRNA was synthesized into first strand cDNA using random primers; 4. The second strand cDNA was synthesized with dUTP instead of dTTP; 5. The synthesized cDNA was subjected to end-repair and 3' adenylated. Adaptors were ligated to the ends of these 3' adenylated cDNA fragments; 6. Digest the U-labeled second-strand template with Uracil-DNA-Glycosylase (UDG) and perform PCR amplification; 7. Library quality control; 8. Library circularization; 9. The library was amplified to make DNA nanoball (DNB);

text: plant embryo true leaf formation stage

characteristic: developmental stage

text: ire1a ire1b mutant

characteristic: genotype

text: Sample 45

characteristic: individual

text: not applicable

characteristic: isolate

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: root

characteristic: organism part

text: Arabidopsis thaliana


text: agroparistech

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: thale cress

characteristic: description

text: plant embryo true leaf formation stage

text: ire1a ire1b mutant

text: Sample 46

text: not applicable

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: root

text: Arabidopsis thaliana

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: agroparistech

characteristic: INSDC center name

text: public

text: ArrayExpress

text: thale cress

text: plant embryo true leaf formation stage

text: ire1a ire1b mutant

text: Sample 47

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: root

text: Arabidopsis thaliana


text: agroparistech

text: public

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

characteristic: cultivar

text: plant embryo true leaf formation stage

text: ire1a ire1b mutant

text: Sample 48

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: root

text: Arabidopsis thaliana


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ETH ZURICH

characteristic: INSDC first public

text: public

text: spades.py --meta

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

text: metagenomic bin from biosample SAMEA2621509

text: Ocean water

characteristic: environment (biome)

text: Ocean water

characteristic: environment (feature)

text: Ocean water

characteristic: environment (material)

text: Southern Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: ocean water

text: marine metagenome

characteristic: metagenomic source

text: marine metagenome

characteristic: project name

characteristic: sample derived from

text: marine metagenome

text: Illumina

characteristic: sequencing method


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: agroparistech

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

characteristic: cultivar

characteristic: description

text: plant embryo true leaf formation stage

characteristic: developmental stage

text: ire1a ire1b mutant

characteristic: genotype

text: Sample 49

characteristic: individual

text: not applicable

characteristic: isolate

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: root

characteristic: organism part

text: Arabidopsis thaliana

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: agroparistech

characteristic: INSDC center name

text: public

text: ArrayExpress

text: thale cress

text: plant embryo true leaf formation stage

text: ire1a ire1b mutant

text: Sample 18

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot

text: Arabidopsis thaliana


text: agroparistech

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: thale cress

text: plant embryo true leaf formation stage

text: ire1a ire1b mutant

text: Sample 20

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot

text: Arabidopsis thaliana


text: agroparistech

text: public

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

characteristic: cultivar

text: plant embryo true leaf formation stage

text: ire1a ire1b mutant

text: Sample 21

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot

text: Arabidopsis thaliana


text: agroparistech

text: public

text: ArrayExpress

text: thale cress

characteristic: description

text: plant embryo true leaf formation stage

characteristic: developmental stage

text: ire1a ire1b mutant

characteristic: genotype

text: Sample 22

characteristic: individual

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot

text: Arabidopsis thaliana


text: agroparistech

text: public

text: ArrayExpress

text: thale cress

text: plant embryo true leaf formation stage

text: ire1a ire1b mutant

text: Sample 23

text: not applicable

characteristic: isolate

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: shoot

characteristic: organism part

text: Arabidopsis thaliana

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: agroparistech

characteristic: INSDC center name

text: public

text: ArrayExpress

text: thale cress

text: plant embryo true leaf formation stage

text: ire1a ire1b mutant

text: Sample 52

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: root

text: Arabidopsis thaliana


text: agroparistech

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: thale cress

text: plant embryo true leaf formation stage

text: ire1a ire1b mutant

text: Sample 53

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: root

text: Arabidopsis thaliana


text: agroparistech

text: public

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

characteristic: cultivar

text: plant embryo true leaf formation stage

text: ire1a ire1b mutant

text: Sample 54

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: root

text: Arabidopsis thaliana


text: agroparistech

text: public

text: ArrayExpress

text: thale cress

characteristic: description

text: plant embryo true leaf formation stage

characteristic: developmental stage

text: ire1a ire1b mutant

characteristic: genotype

text: Sample 55

characteristic: individual

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: root

text: Arabidopsis thaliana


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ETH ZURICH

characteristic: INSDC first public

text: public

text: spades.py --meta

characteristic: assembly software

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text: metagenomic bin from biosample SAMEA2623907

text: Ocean water

characteristic: environment (biome)

text: Ocean water

characteristic: environment (feature)

text: Ocean water

characteristic: environment (material)

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

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text: ocean water

text: marine metagenome

characteristic: metagenomic source

text: marine metagenome

characteristic: organism

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text: marine metagenome

text: Illumina

characteristic: sequencing method

characteristic: title


characteristic: ENA first public

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characteristic: External Id

text: agroparistech

characteristic: INSDC center name

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text: public

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characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

characteristic: cultivar

characteristic: description

text: plant embryo true leaf formation stage

characteristic: developmental stage

text: ire1a ire1b mutant

characteristic: genotype

text: Sample 57

characteristic: individual

text: not applicable

characteristic: isolate

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: root

characteristic: organism part

text: Arabidopsis thaliana


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: agroparistech

text: public

text: ArrayExpress

text: thale cress

text: plant embryo true leaf formation stage

text: ire1a ire1b mutant

text: Sample 24

text: not applicable

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: shoot

text: Arabidopsis thaliana

characteristic: title


characteristic: External Id

text: agroparistech

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: thale cress

text: plant embryo true leaf formation stage

text: ire1a ire1b mutant

text: Sample 25

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot

text: Arabidopsis thaliana


text: agroparistech

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: plant embryo true leaf formation stage

text: ire1a ire1b mutant

text: Sample 27

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot

text: Arabidopsis thaliana


text: agroparistech

text: public

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: cultivar

characteristic: description

text: plant embryo true leaf formation stage

characteristic: developmental stage

text: ire1a ire1b mutant

text: Sample 29

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot

text: Arabidopsis thaliana


text: agroparistech

text: public

text: ArrayExpress

text: thale cress

text: plant embryo true leaf formation stage

text: ire1a ire1b mutant

characteristic: genotype

text: Sample 30

characteristic: individual

text: not applicable

characteristic: isolate

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot

characteristic: organism part

text: Arabidopsis thaliana


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: agroparistech

text: public

text: ArrayExpress

text: thale cress

text: plant embryo true leaf formation stage

text: wild type genotype

text: Sample 31

text: not applicable

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: root

text: Arabidopsis thaliana

characteristic: title


characteristic: External Id

text: agroparistech

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: thale cress

text: plant embryo true leaf formation stage

text: wild type genotype

text: Sample 32

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: root

text: Arabidopsis thaliana


text: agroparistech

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: plant embryo true leaf formation stage

text: wild type genotype

text: Sample 33

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: root

text: Arabidopsis thaliana


text: agroparistech

text: public

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: cultivar

characteristic: description

text: plant embryo true leaf formation stage

characteristic: developmental stage

text: wild type genotype

text: Sample 34

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: root

text: Arabidopsis thaliana


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ETH ZURICH

characteristic: INSDC first public

text: public

text: spades.py --meta

characteristic: assembly software

text: tetra-nucleotide frequencies and co-abundance, --minContig 2000 --maxEdges 500

characteristic: binning parameters

characteristic: binning software

text: metagenomic bin from biosample SAMEA2621003

text: Ocean water

characteristic: environment (biome)

text: Ocean water

characteristic: environment (feature)

text: Ocean water

characteristic: environment (material)

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: ocean water

text: marine metagenome

characteristic: metagenomic source

text: marine metagenome

characteristic: project name

characteristic: sample derived from

text: marine metagenome

text: Illumina

characteristic: sequencing method


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: agroparistech

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

characteristic: cultivar

characteristic: description

text: plant embryo true leaf formation stage

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Sample 37

characteristic: individual

text: not applicable

characteristic: isolate

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: root

characteristic: organism part

text: Arabidopsis thaliana

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: agroparistech

characteristic: INSDC center name

text: public

text: ArrayExpress

text: thale cress

text: plant embryo true leaf formation stage

text: wild type genotype

text: Sample 2

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot

text: Arabidopsis thaliana


text: agroparistech

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: thale cress

text: plant embryo true leaf formation stage

text: wild type genotype

text: Sample 4

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot

text: Arabidopsis thaliana


text: agroparistech

text: public

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

characteristic: cultivar

text: plant embryo true leaf formation stage

text: wild type genotype

text: Sample 5

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot

text: Arabidopsis thaliana


text: agroparistech

text: public

text: ArrayExpress

text: thale cress

characteristic: description

text: plant embryo true leaf formation stage

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Sample 6

characteristic: individual

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot

text: Arabidopsis thaliana


text: agroparistech

text: public

text: ArrayExpress

text: thale cress

text: plant embryo true leaf formation stage

text: wild type genotype

text: Sample 7

text: not applicable

characteristic: isolate

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: shoot

characteristic: organism part

text: Arabidopsis thaliana

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: agroparistech

characteristic: INSDC center name

text: public

text: ArrayExpress

text: thale cress

text: plant embryo true leaf formation stage

text: wild type genotype

text: Sample 38

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: root

text: Arabidopsis thaliana


text: agroparistech

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: thale cress

text: plant embryo true leaf formation stage

text: wild type genotype

text: Sample 39

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: root

text: Arabidopsis thaliana


text: agroparistech

text: public

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

characteristic: cultivar

text: plant embryo true leaf formation stage

text: wild type genotype

text: Sample 41

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: root

text: Arabidopsis thaliana


text: agroparistech

text: public

text: ArrayExpress

text: thale cress

characteristic: description

text: plant embryo true leaf formation stage

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Sample 43

characteristic: individual

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: root

text: Arabidopsis thaliana


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ETH ZURICH

characteristic: INSDC first public

text: public

text: spades.py --meta

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

text: metagenomic bin from biosample SAMEA2622715

text: Ocean water

characteristic: environment (biome)

text: Ocean water

characteristic: environment (feature)

text: Ocean water

characteristic: environment (material)

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: ocean water

text: marine metagenome

characteristic: metagenomic source

text: marine metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: marine metagenome

text: Illumina

characteristic: sequencing method

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: agroparistech

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

characteristic: common name

characteristic: cultivar

characteristic: description

text: plant embryo true leaf formation stage

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: Sample 44

characteristic: individual

text: not applicable

characteristic: isolate

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: root

characteristic: organism part

text: Arabidopsis thaliana


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: agroparistech

text: public

text: ArrayExpress

text: thale cress

text: plant embryo true leaf formation stage

text: wild type genotype

text: Sample 11

text: not applicable

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: shoot

text: Arabidopsis thaliana

characteristic: title


characteristic: External Id

text: agroparistech

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: thale cress

text: plant embryo true leaf formation stage

text: wild type genotype

text: Sample 12

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot

text: Arabidopsis thaliana


text: agroparistech

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: thale cress

text: plant embryo true leaf formation stage

text: wild type genotype

text: Sample 13

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot

text: Arabidopsis thaliana


text: agroparistech

text: public

text: ArrayExpress

text: thale cress

characteristic: common name

characteristic: cultivar

characteristic: description

text: plant embryo true leaf formation stage

characteristic: developmental stage

text: wild type genotype

text: Sample 14

text: not applicable

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot

text: Arabidopsis thaliana


text: agroparistech

text: public

text: ArrayExpress

text: thale cress

text: plant embryo true leaf formation stage

text: wild type genotype

characteristic: genotype

text: Sample 15

characteristic: individual

text: not applicable

characteristic: isolate

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: shoot

characteristic: organism part

text: Arabidopsis thaliana


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: ETH ZURICH

characteristic: INSDC first public

text: public

text: spades.py --meta

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

text: metagenomic bin from biosample SAMN07136937

text: Ocean water

characteristic: environment (biome)

text: Ocean water

characteristic: environment (feature)

text: Ocean water

characteristic: environment (material)

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: ocean water

text: marine metagenome

characteristic: metagenomic source

text: marine metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: marine metagenome

text: Illumina

characteristic: sequencing method

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ETH ZURICH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: spades.py --meta

text: metagenomic bin from biosample SAMEA2623390

characteristic: description

text: Ocean water

text: Ocean water

text: Ocean water

text: Pacific Ocean

text: metagenome

text: ocean water

text: marine metagenome

text: marine metagenome

text: marine metagenome

text: Illumina