text: public

text: DNA of individual worm

text: Bangladesh

text: Strongyloides fuelleborni

text: Strongyloides fuelleborni

text: Human_G22 - f1


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY

characteristic: Submitter Id

characteristic: collection date

text: DNA of individual worm

characteristic: description

text: Bangladesh

characteristic: geographic location (country and/or sea)

text: Strongyloides fuelleborni

characteristic: organism

text: Strongyloides fuelleborni

text: Human_V132 - f1

characteristic: title


text: MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY

text: public

text: DNA of individual worm

text: Bangladesh

text: Strongyloides stercoralis

text: Strongyloides stercoralis

text: Human_C19 - f2


text: public

tag: Namespace:Respiratory Virus Unit, Microbiology Services Colindale, Public Health England

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: receipt date

text: active surveillance in response to outbreak

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Respiratory Virus Unit, Microbiology Services Colindale, Public Health England

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: collection date

text: not provided

text: not provided

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

text: not provided

text: not provided


text: public

tag: Namespace:Originating lab: Wales Specialist Virology Centre Sequencing lab: Pathogen Genomics Unit

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: Wales

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

characteristic: title

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Originating lab: Wales Specialist Virology Centre Sequencing lab: Pathogen Genomics Unit

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: Wales

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


text: public

tag: Namespace:West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Scotland

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: organism

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: Scotland

text: not provided

text: not provided

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: not provided

characteristic: title

text: not provided


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

text: public

characteristic: SRA accession

tag: Namespace:Tree of Life Programme

characteristic: Submitter Id

text: terrestrial biome

characteristic: broad-scale environmental context

text: Philipp Resl

text: Institue of Biology, University of Graz, Austria

characteristic: collecting institution

characteristic: collection date

text: adult lichen tissue

characteristic: environmental medium

text: Austria

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Steiermark | Gemeinde Wielfresen | South of Wirtbartl Weg Wiel St. Oswald | ca. 800 m vor Gasthof Wirtbartl | ca. 1300 m a.s.l.

characteristic: geographic location (region and locality)

text: Mixed forest with Fagus sylvatica, Picea abies and Pinus sylvestris. On side of decaying coniferous tree stump

characteristic: habitat

text: vegetative structure

characteristic: host life stage

text: Cladonia norvegica

text: other

characteristic: host taxid

text: Philipp Resl

text: woodland biome

characteristic: local environmental context

text: lichen metagenome

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

characteristic: project name

characteristic: sample derived from

text: lichen metagenome

text: ERGA PR AT 01

text: NOT PROVIDED

text: N

characteristic: symbiont

text: a24fd055-95b2-477a-bfd9-2d0f57d31fe8-asg-metagenome

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); MaxBin (version 2.7)

characteristic: binning software

text: terrestrial biome

characteristic: broad-scale environmental context

text: Philipp Resl

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

characteristic: contamination score

text: adult lichen tissue

text: Austria

text: vegetative structure

text: Cladonia norvegica

characteristic: host scientific name

text: other

characteristic: host sex

text: Philipp Resl

text: metagenome-assembled genome

characteristic: investigation type

text: Lichen: Cladonia norvegica

text: woodland biome

text: lichen metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Acidobacteriaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ToL

text: Acidobacteriaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: ERGA PR AT 01

text: NOT PROVIDED

text: N

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

text: GTDB-TK (version 2.3.2); GTDB (release 214)

characteristic: taxonomic classification

text: taxonomic classification defined by topology and ANI

characteristic: taxonomic identity marker

text: af64610c-7abe-4e96-8885-7e36ac9b76ce-asg-MAGScoT_cleanbin_000006

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

text: terrestrial biome

text: Philipp Resl

characteristic: collecting institution

characteristic: collection date

text: adult lichen tissue

characteristic: environmental medium

text: Austria

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

characteristic: habitat

text: vegetative structure

characteristic: host life stage

text: Cladonia norvegica

text: other

characteristic: host taxid

text: Philipp Resl

text: metagenome-assembled genome

text: Lichen: Cladonia norvegica

text: woodland biome

characteristic: local environmental context

text: lichen metagenome

text: Acetobacteraceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

characteristic: project name

characteristic: sample derived from

text: Acetobacteraceae bacterium

text: Pacbio Sequel II

text: ERGA PR AT 01

text: NOT PROVIDED

text: N

characteristic: symbiont

text: PROKKA (version 1.14.5)

text: taxonomic classification fully defined by topology

text: f9b8b431-a7fc-40ee-856b-e0cdc5db1c99-asg-MAGScoT_cleanbin_000004

characteristic: tolid


text: No

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: terrestrial biome

characteristic: broad-scale environmental context

text: Philipp Resl

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult lichen tissue

text: Austria

text: vegetative structure

text: Cladonia norvegica

characteristic: host scientific name

text: other

characteristic: host sex

text: Philipp Resl

text: metagenome-assembled genome

characteristic: investigation type

text: Lichen: Cladonia norvegica

text: woodland biome

text: lichen metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Acetobacteraceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ToL

text: Acetobacteraceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: ERGA PR AT 01

text: NOT PROVIDED

text: N

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 085a2b5f-271e-4c74-a552-11e9442400a6-asg-MAGScoT_cleanbin_000005

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

text: terrestrial biome

text: Philipp Resl

characteristic: collecting institution

characteristic: collection date

text: adult lichen tissue

characteristic: environmental medium

text: Austria

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

characteristic: habitat

text: vegetative structure

characteristic: host life stage

text: Cladonia norvegica

text: other

characteristic: host taxid

text: Philipp Resl

text: metagenome-assembled genome

text: Lichen: Cladonia norvegica

text: woodland biome

characteristic: local environmental context

text: lichen metagenome

text: Lichenihabitans sp.

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

characteristic: project name

characteristic: sample derived from

text: Lichenihabitans sp.

text: Pacbio Sequel II

text: ERGA PR AT 01

text: NOT PROVIDED

text: N

characteristic: symbiont

text: PROKKA (version 1.14.5)

text: ANI

text: 5335733b-3aad-4d56-b87d-97cb8737224d-asg-MAGScoT_cleanbin_000003

characteristic: tolid


text: No

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: terrestrial biome

characteristic: broad-scale environmental context

text: Philipp Resl

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult lichen tissue

text: Austria

text: vegetative structure

text: Cladonia norvegica

characteristic: host scientific name

text: other

characteristic: host sex

text: Philipp Resl

text: metagenome-assembled genome

characteristic: investigation type

text: Lichen: Cladonia norvegica

text: woodland biome

text: lichen metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Beijerinckiaceae bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ToL

text: Beijerinckiaceae bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: ERGA PR AT 01

text: NOT PROVIDED

text: N

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: a13bbddb-432e-4716-bd7d-60bf788a81ee-asg-MAGScoT_cleanbin_000010

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

text: terrestrial biome

text: Philipp Resl

characteristic: collecting institution

characteristic: collection date

text: adult lichen tissue

characteristic: environmental medium

text: Austria

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

characteristic: habitat

text: vegetative structure

characteristic: host life stage

text: Cladonia norvegica

text: other

characteristic: host taxid

text: Philipp Resl

text: metagenome-assembled genome

text: Lichen: Cladonia norvegica

text: woodland biome

characteristic: local environmental context

text: lichen metagenome

text: Steroidobacteraceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

characteristic: project name

characteristic: sample derived from

text: Steroidobacteraceae bacterium

text: Pacbio Sequel II

text: ERGA PR AT 01

text: NOT PROVIDED

text: N

characteristic: symbiont

text: PROKKA (version 1.14.5)

text: 873a7a24-abe7-4f9c-af1a-bfa10ddff1c3-asg-MAGScoT_cleanbin_000009

characteristic: tolid


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: terrestrial biome

characteristic: broad-scale environmental context

text: Philipp Resl

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: adult lichen tissue

text: Austria

text: vegetative structure

text: Cladonia norvegica

characteristic: host scientific name

text: other

characteristic: host sex

text: Philipp Resl

text: metagenome-assembled genome

characteristic: investigation type

text: Lichen: Cladonia norvegica

text: woodland biome

text: lichen metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Granulicella sp.

characteristic: organism

text: WHOLE ORGANISM

text: ToL

text: uncultured Granulicella sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: ERGA PR AT 01

text: NOT PROVIDED

text: N

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 532c3363-cb9a-4ff4-a964-62ae8f4e4543-asg-MAGScoT_cleanbin_000001

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: coverage; graph

characteristic: binning parameters

text: terrestrial biome

text: Philipp Resl

text: Institue of Biology, University of Graz, Austria

characteristic: collecting institution

characteristic: collection date

text: adult lichen tissue

characteristic: environmental medium

text: Austria

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Steiermark | Gemeinde Wielfresen | South of Wirtbartl Weg Wiel St. Oswald | ca. 800 m vor Gasthof Wirtbartl | ca. 1300 m a.s.l.

characteristic: geographic location (region and locality)

characteristic: habitat

text: vegetative structure

characteristic: host life stage

text: Cladonia norvegica

text: other

characteristic: host taxid

text: Philipp Resl

text: metagenome-assembled genome

text: Lichen: Cladonia norvegica

text: woodland biome

characteristic: local environmental context

text: lichen metagenome

text: uncultured Granulicella sp.

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

characteristic: project name

characteristic: sample derived from

text: uncultured Granulicella sp.

text: Pacbio Sequel II

text: ERGA PR AT 01

text: NOT PROVIDED

text: N

characteristic: symbiont

text: PROKKA (version 1.14.5)

text: 9057d4d9-b77b-4c6f-b84b-ea5519435b63-asg-MAGScoT_cleanbin_000002

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Sanger Institute

characteristic: GAL

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Nick Davison

text: Scottish Marine Animal Stranding Scheme University of Glasgow

text: killer whale

characteristic: common name

text: United Kingdom

text: Scotland | Shetland | Linga | Shoreline

text: Shoreline

text: Nick Davison

text: adult

characteristic: lifestage

text: Orcinus orca

characteristic: organism

text: LUNG

text: Orcinus orca

text: FEMALE

characteristic: sex

text: NOT PROVIDED

text: N

characteristic: title


text: public

tag: Namespace:Institute for Infectious Diseases, Bern, Switzerland

text: SIB

characteristic: broker name

text: Institute for Infectious Diseases, University of Bern, Switzerland

characteristic: collecting institution

characteristic: collection date

text: Lea Stauber, Christian Baumann, Miguel A Terrazos Miani, Sonja Gempeler, Loïc Borcard, Stefan Neuenschwander, Cora Sägesser, Pascal Bittel, Peter Keller, Franziska Suter-Riniker, Stephen L Leib, Alban Ramette

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-231113_os_34/2023

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance not initiated by an outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute for Infectious Diseases, Bern, Switzerland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: Switzerland

text: BE

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-231113_os_22/2023


text: public

text: SIB

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: BE

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/BE-IFIK-231113_os_09/2023

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: SIB

text: Switzerland

text: BE

text: Human

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/BE-IFIK-231120_os_30/2023

characteristic: isolate

characteristic: sample capture status


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

characteristic: collecting institution

text: Switzerland

text: BE

text: Human

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text: hCoV-19/Switzerland/BE-IFIK-231120_os_16/2023


characteristic: ENA-CHECKLIST

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characteristic: collection date

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text: hCoV-19/Switzerland/BE-IFIK-231113_os_07/2023

characteristic: organism

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text: Lea Stauber, Christian Baumann, Miguel A Terrazos Miani, Sonja Gempeler, Loïc Borcard, Stefan Neuenschwander, Cora Sägesser, Pascal Bittel, Peter Keller, Franziska Suter-Riniker, Stephen L Leib, Alban Ramette

text: Switzerland

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characteristic: ENA-LAST-UPDATE

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text: hCoV-19/Switzerland/BE-IFIK-231113_os_26/2023

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characteristic: ENA-CHECKLIST

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text: hCoV-19/Switzerland/BE-IFIK-231120_os_18/2023

characteristic: organism

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characteristic: ENA-LAST-UPDATE

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characteristic: geographic location (region and locality)

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text: hCoV-19/Switzerland/BE-IFIK-231120_os_05/2023

characteristic: organism

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text: hCoV-19/Switzerland/BE-IFIK-231113_os_36/2023

characteristic: isolate

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characteristic: ENA-LAST-UPDATE

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text: public

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text: Human

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text: hCoV-19/Switzerland/BE-IFIK-231120_os_33/2023


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

tag: Namespace:Klinikum rechts der Isar, II. Medizinische Klinik

characteristic: collection date

text: human

characteristic: common name

text: CasRx dropout screen of cell line A549 with ALBAROSSA library, replicate 1

characteristic: description

text: Germany

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: CRISPR/CasRx ALBAROSSA screen Amplicon-Seq

characteristic: title


characteristic: ENA-LAST-UPDATE

text: Klinikum rechts der Isar, II. Medizinische Klinik

characteristic: INSDC center name

text: public

text: human

text: CasRx dropout screen of cell line A549 with ALBAROSSA library, replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens


characteristic: External Id

characteristic: INSDC first public

text: public

text: human

text: CasRx dropout screen of cell line A549 with ControlLibrary library, replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens

text: CRISPR/CasRx ControlLibrary screen Amplicon-Seq


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: human

text: CasRx dropout screen of cell line A549 with ControlLibrary library, replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: human

text: Cell line A549 Cytoplasmic fraction of RNA

text: Germany

text: Homo sapiens

text: Homo sapiens

text: Nuclear/Cytoplasmic fraction Full Length RNA-seq


text: public

text: human

text: Cell line A549 Nuclear fraction of RNA

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Insertion Site Sequencing (Qi-seq) of cell line A549, 3’ PCR

text: Germany

text: Homo sapiens

text: Homo sapiens

text: Qi-Seq sample


text: public

text: human

text: Insertion Site Sequencing (Qi-seq) of cell line A549, 5’ PCR

text: Germany

text: Homo sapiens

text: Homo sapiens

text: Qi-Seq sample


text: public

text: human

text: Cell line A549 selected clone with the integrated CasRx protein, replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Cell line A549 selected clone with the integrated CasRx protein, replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Original cell pool of cell line A549 without the CasRx protein, replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Original cell pool of cell line A549 without the CasRx protein, replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: ALBAROSSA library plasmid pool

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: ControlLibrary plasmid pool

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: CasRx dropout screen of cell line KP4 with ALBAROSSA library, replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: CasRx dropout screen of cell line KP4 with ALBAROSSA library, replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Cell line KP4 Cytoplasmic fraction of RNA

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Cell line KP4 Nuclear fraction of RNA

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Insertion Site Sequencing (Qi-seq) of cell line KP4, 3’ PCR

text: Germany

text: Homo sapiens

text: Homo sapiens

text: Qi-Seq sample


text: Klinikum rechts der Isar, II. Medizinische Klinik

text: public

text: human

text: Insertion Site Sequencing (Qi-seq) of cell line KP4, 5’ PCR

text: Germany

text: Homo sapiens

text: Homo sapiens

text: Qi-Seq sample


text: public

text: human

text: Cell line KP4 selected clone with the integrated CasRx protein, replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Cell line KP4 selected clone with the integrated CasRx protein, replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Original cell pool of cell line KP4 without the CasRx protein, replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Original cell pool of cell line KP4 without the CasRx protein, replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: CasRx dropout screen of cell line LN18 original pool without CasRx integration with ALBAROSSA library, replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens

text: CRISPR/CasRx ALBAROSSA screen Amplicon-Seq


text: public

text: human

text: CasRx dropout screen of cell line LN18 original pool without CasRx integration with ALBAROSSA library, replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: CasRx dropout screen of cell line LN18 with ControlLibrary library, replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens

text: CRISPR/CasRx ControlLibrary screen Amplicon-Seq


text: public

text: human

text: Cell line LN18 Cytoplasmic fraction of RNA

text: Germany

text: Homo sapiens

text: Homo sapiens

text: Nuclear/Cytoplasmic fraction Full Length RNA-seq


text: public

text: human

text: Cell line LN18 Nuclear fraction of RNA

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Insertion Site Sequencing (Qi-seq) of cell line LN18, 3’ PCR

text: Germany

text: Homo sapiens

text: Homo sapiens

text: Qi-Seq sample


text: public

text: human

text: Insertion Site Sequencing (Qi-seq) of cell line LN18, 5’ PCR

text: Germany

text: Homo sapiens

text: Homo sapiens

text: Qi-Seq sample


text: public

text: human

text: Cell line LN18 selected clone with the integrated CasRx protein, replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Cell line LN18 selected clone with the integrated CasRx protein, replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens


text: Klinikum rechts der Isar, II. Medizinische Klinik

text: public

text: human

text: Original cell pool of cell line LN18 without the CasRx protein, replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Original cell pool of cell line LN18 without the CasRx protein, replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: CasRx dropout screen of cell line LN18 with ALBAROSSA library, replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: CasRx dropout screen of cell line LN18 with ALBAROSSA library, replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: CasRx dropout screen of cell line LN229 with ALBAROSSA library, replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: CasRx dropout screen of cell line LN229 with ALBAROSSA library, replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: CasRx dropout screen of cell line LN229 with ControlLibrary library, replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Cell line LN229 Cytoplasmic fraction of RNA

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Cell line LN229 Nuclear fraction of RNA

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Insertion Site Sequencing (Qi-seq) of cell line LN229, 3’ PCR

text: Germany

text: Homo sapiens

text: Homo sapiens

text: Qi-Seq sample


text: public

text: human

text: Insertion Site Sequencing (Qi-seq) of cell line LN229, 5’ PCR

text: Germany

text: Homo sapiens

text: Homo sapiens

text: Qi-Seq sample


text: public

text: human

text: Cell line LN229 selected clone with the integrated CasRx protein, replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Cell line LN229 selected clone with the integrated CasRx protein, replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Original cell pool of cell line LN229 without the CasRx protein, replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Original cell pool of cell line LN229 without the CasRx protein, replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: CasRx dropout screen of cell line MIAPACA2 with ALBAROSSA library, replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens

text: CRISPR/CasRx ALBAROSSA screen Amplicon-Seq


text: Klinikum rechts der Isar, II. Medizinische Klinik

text: public

text: human

text: CasRx dropout screen of cell line MIAPACA2 with ALBAROSSA library, replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Cell line MIAPACA2 Cytoplasmic fraction of RNA

text: Germany

text: Homo sapiens

text: Homo sapiens

text: Nuclear/Cytoplasmic fraction Full Length RNA-seq


text: public

text: human

text: Cell line MIAPACA2 Nuclear fraction of RNA

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Insertion Site Sequencing (Qi-seq) of cell line MIAPACA2, 3’ PCR

text: Germany

text: Homo sapiens

text: Homo sapiens

text: Qi-Seq sample


text: public

text: human

text: Insertion Site Sequencing (Qi-seq) of cell line MIAPACA2, 5’ PCR

text: Germany

text: Homo sapiens

text: Homo sapiens

text: Qi-Seq sample


text: public

text: human

text: Cell line MIAPACA2 selected clone with the integrated CasRx protein, replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Cell line MIAPACA2 selected clone with the integrated CasRx protein, replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Original cell pool of cell line MIAPACA2 without the CasRx protein, replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Original cell pool of cell line MIAPACA2 without the CasRx protein, replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: CasRx dropout screen of cell line MIAPACA2 original pool without CasRx integration with ALBAROSSA library, replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: CasRx dropout screen of cell line MIAPACA2 original pool without CasRx integration with ALBAROSSA library, replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: CasRx dropout screen of cell line NCIH460 with ALBAROSSA library, replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: CasRx dropout screen of cell line NCIH460 with ALBAROSSA library, replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Cell line NCIH460 Cytoplasmic fraction of RNA

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Cell line NCIH460 Nuclear fraction of RNA

text: Germany

text: Homo sapiens

text: Homo sapiens


text: Klinikum rechts der Isar, II. Medizinische Klinik

text: public

text: human

text: Insertion Site Sequencing (Qi-seq) of cell line NCIH460, 3’ PCR

text: Germany

text: Homo sapiens

text: Homo sapiens

text: Qi-Seq sample


text: public

text: human

text: Insertion Site Sequencing (Qi-seq) of cell line NCIH460, 5’ PCR

text: Germany

text: Homo sapiens

text: Homo sapiens

text: Qi-Seq sample


text: public

text: human

text: Cell line NCIH460 selected clone with the integrated CasRx protein, replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Cell line NCIH460 selected clone with the integrated CasRx protein, replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Original cell pool of cell line NCIH460 without the CasRx protein, replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Original cell pool of cell line NCIH460 without the CasRx protein, replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: CasRx dropout screen of cell line NCIH460 original pool without CasRx integration with ALBAROSSA library, replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens

text: CRISPR/CasRx ALBAROSSA screen Amplicon-Seq


text: public

text: human

text: CasRx dropout screen of cell line NCIH460 original pool without CasRx integration with ALBAROSSA library, replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens


text: Anthony Smith, NICD

text: public

tag: Namespace:Anthony Smith, NICD

text: EnteroBase

characteristic: broker name

text: EnteroBase

text: A. Smith, National Institute for Communicable Diseases

text: Whole genome sequencing data uploaded by EnteroBase user

text: South Africa

text: Limpopo

characteristic: geographic location (region and locality)

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Isangi

characteristic: serovar

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

characteristic: collection date

text: South Africa

text: Gauteng

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Isangi


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

characteristic: description

text: South Africa

characteristic: geographic location (country and/or sea)

text: Gauteng

text: Human, Stool

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Isangi


characteristic: ENA-LAST-UPDATE

text: Anthony Smith, NICD

characteristic: INSDC center name

text: public

text: EnteroBase

text: EnteroBase

text: South Africa

text: Eastern Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Isangi

characteristic: title


characteristic: External Id

text: UPSC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: N2-9 ivermectin

text: Adult

text: Sweden

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: N2-91G sample 1


text: UPSC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: N2-9 ivermectin

text: Adult

text: Sweden

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: N2-92G sample 2


text: UPSC

text: public

text: N2-9 ivermectin

text: Adult

text: Sweden

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: N2-93G sample 3


text: UPSC

text: public

text: N2-9 ivermectin

text: Adult

text: Sweden

text: Caenorhabditis elegans

text: Caenorhabditis elegans

text: N2-94G sample 4


text: public

tag: Namespace:Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Sjaelland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

characteristic: INSDC center name

text: public

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Sjaelland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Nordjylland

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Syddanmark

text: Human

text: n_infections=2,last_infection_date=2022-02-07

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Midtjylland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-02-21

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Midtjylland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Midtjylland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2020-12-07

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

text: Human

text: n_infections=2,last_infection_date=2022-01-24

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Sjaelland

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-322487/2022

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Syddanmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-01-03

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Syddanmark

text: Human

text: n_infections=2,last_infection_date=2022-03-07

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Hovedstaden

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-196007/2021

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-121510/2021

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Nordjylland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Midtjylland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-01-17

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Sjaelland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Midtjylland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-220499/2021

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

text: Human

text: n_infections=2,last_infection_date=2021-12-06

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Midtjylland

text: Human

text: n_infections=3,last_infection_date=2022-01-24

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: Submitter Id

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Syddanmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Midtjylland

text: Human

text: n_infections=2,last_infection_date=2022-02-28

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

text: active surveillance in response to outbreak

characteristic: title


text: Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Midtjylland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2020-10-26

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Nordjylland

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Nordjylland

text: Human

text: n_infections=2,last_infection_date=2022-02-07

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Sjaelland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-03-21

characteristic: host description

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-272837/2021

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title