characteristic: ENA-FIRST-PUBLIC

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text: soil

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

text: metagenome

text: soil metagenome

text: soil metagenome

text: Illumina Novaseq PE250

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text: open soil sample 17A


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

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text: INIA-CSIC

characteristic: INSDC center name

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text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: targeted fungal ITS2 sequencing from soil

characteristic: description

text: woodland

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unit: m

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

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text: soil metagenome

characteristic: organism

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characteristic: title


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text: metagenome

text: soil metagenome

text: soil metagenome

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text: open soil sample 18A


characteristic: ENA-CHECKLIST

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text: metagenome

text: soil metagenome

text: soil metagenome

text: Illumina Novaseq PE250

text: soil

text: closed soil sample 18C


characteristic: ENA-FIRST-PUBLIC

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characteristic: INSDC last update

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characteristic: ENA-CHECKLIST

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text: metagenome

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text: soil metagenome

text: Illumina Novaseq PE250

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text: closed soil sample 19C


characteristic: ENA-FIRST-PUBLIC

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text: open soil sample 20A


characteristic: ENA-CHECKLIST

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characteristic: ENA-CHECKLIST

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text: metagenome

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text: closed soil sample 21C


characteristic: ENA-FIRST-PUBLIC

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text: open soil sample 22A

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text: metagenome

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text: Illumina Novaseq PE250

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text: closed soil sample 22C


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text: metagenome

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text: soil metagenome

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text: open soil sample 23A


characteristic: ENA-CHECKLIST

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text: INIA-CSIC

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text: closed soil sample 23C

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characteristic: geographic location (elevation)

text: metagenome

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text: soil metagenome

text: Illumina Novaseq PE250

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text: open soil sample 24A


characteristic: ENA-CHECKLIST

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text: INIA-CSIC

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

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text: soil metagenome

text: Illumina Novaseq PE250

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text: closed soil sample 24C


characteristic: ENA-FIRST-PUBLIC

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text: INIA-CSIC

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characteristic: sequencing method

text: soil

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text: open soil sample 25A

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characteristic: ENA-CHECKLIST

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text: INIA-CSIC

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text: public

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text: metagenome

text: soil metagenome

text: soil metagenome

text: Illumina Novaseq PE250

text: soil

text: closed soil sample 25C


characteristic: ENA-FIRST-PUBLIC

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text: INIA-CSIC

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: soil metagenome

text: soil metagenome

text: Illumina Novaseq PE250

text: soil

text: open soil sample 26A


characteristic: ENA-CHECKLIST

characteristic: External Id

text: INIA-CSIC

characteristic: INSDC center name

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text: public

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characteristic: investigation type

text: soil metagenome

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text: Illumina Novaseq PE250

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text: soil

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text: closed soil sample 26C

characteristic: title


characteristic: ENA-FIRST-PUBLIC

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text: INIA-CSIC

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text: public

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text: soil

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text: Spain

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text: metagenome

text: soil metagenome

text: soil metagenome

text: Illumina Novaseq PE250

text: soil

text: open soil sample 27A


characteristic: ENA-CHECKLIST

characteristic: External Id

text: INIA-CSIC

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text: public

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characteristic: geographic location (longitude)

text: metagenome

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text: soil metagenome

text: Illumina Novaseq PE250

text: soil

text: closed soil sample 27C


characteristic: ENA-FIRST-PUBLIC

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text: INIA-CSIC

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text: public

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text: woodland

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characteristic: investigation type

text: soil metagenome

characteristic: organism

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text: soil metagenome

text: Illumina Novaseq PE250

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: open soil sample 28A

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: INIA-CSIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: woodland

characteristic: environment (biome)

text: parcel

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text: soil

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text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

text: metagenome

text: soil metagenome

text: soil metagenome

text: Illumina Novaseq PE250

text: soil

text: closed soil sample 28C


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INIA-CSIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

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text: woodland

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: soil metagenome

text: soil metagenome

text: Illumina Novaseq PE250

text: soil

text: open soil sample 29A


characteristic: ENA-CHECKLIST

characteristic: External Id

text: INIA-CSIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: woodland

text: parcel

text: soil

text: Spain

text: metagenome

characteristic: investigation type

text: soil metagenome

characteristic: organism

characteristic: project name

text: soil metagenome

text: Illumina Novaseq PE250

characteristic: sequencing method

text: soil

characteristic: soil environmental package

text: closed soil sample 29C

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: INIA-CSIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: woodland

characteristic: environment (biome)

text: parcel

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

text: metagenome

text: soil metagenome

text: soil metagenome

text: Illumina Novaseq PE250

text: soil

text: open soil sample 30A


characteristic: ENA-CHECKLIST

characteristic: External Id

text: INIA-CSIC

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: woodland

text: parcel

text: soil

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: soil metagenome

text: soil metagenome

text: Illumina Novaseq PE250

text: soil

text: closed soil sample 30C


ASG 490

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CIMIC Universidad de los Andes

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ASG 490

tag: Namespace:CIMIC Universidad de los Andes

text: rainforest

characteristic: broad-scale environmental context

text: cacao

characteristic: common name

characteristic: depth

text: Soil sample taken at 1m from a Teobroma Tribu tree

characteristic: elevation

text: tree

characteristic: environmental medium

text: Colombia

text: actinobacteria

characteristic: local environmental context

text: Theobroma cacao

characteristic: organism

text: Soil diversity metabarcoding from cacao crop wild relatives in a tropical biodiversity hot spot

characteristic: project name

text: Theobroma cacao

text: Illumina Mi-Seq 1x250

characteristic: sequencing method

text: ASG 490

characteristic: title


ASG 495

characteristic: ENA-CHECKLIST

characteristic: External Id

text: CIMIC Universidad de los Andes

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ASG 495

characteristic: Submitter Id

text: rainforest

characteristic: collection date

text: cacao

characteristic: description

text: tree

text: Colombia

characteristic: geographic location (country and/or sea)

text: actinobacteria

text: Theobroma cacao

text: Theobroma cacao

text: Illumina Mi-Seq 1x250

text: ASG 495


ASG 633

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CIMIC Universidad de los Andes

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ASG 633

text: rainforest

characteristic: broad-scale environmental context

text: cacao

characteristic: common name

characteristic: depth

text: tree

text: Colombia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: actinobacteria

text: Theobroma cacao

text: Theobroma cacao

text: Illumina Mi-Seq 1x250

text: ASG 633


ASG 643

characteristic: ENA-CHECKLIST

characteristic: External Id

text: CIMIC Universidad de los Andes

text: public

text: ASG 643

text: rainforest

text: cacao

characteristic: elevation

text: tree

characteristic: environmental medium

text: Colombia

text: actinobacteria

characteristic: local environmental context

text: Theobroma cacao

characteristic: organism

characteristic: project name

text: Theobroma cacao

text: Illumina Mi-Seq 1x250

characteristic: sequencing method

text: ASG 643

characteristic: title


ASG 644

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CIMIC Universidad de los Andes

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ASG 644

characteristic: Submitter Id

text: rainforest

characteristic: collection date

text: cacao

characteristic: description

text: tree

text: Colombia

characteristic: geographic location (country and/or sea)

text: actinobacteria

text: Theobroma cacao

text: Theobroma cacao

text: Illumina Mi-Seq 1x250

text: ASG 644


ASG 645

characteristic: ENA-CHECKLIST

characteristic: External Id

text: CIMIC Universidad de los Andes

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ASG 645

text: rainforest

characteristic: broad-scale environmental context

text: cacao

characteristic: common name

characteristic: depth

text: tree

text: Colombia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: actinobacteria

text: Theobroma cacao

text: Theobroma cacao

text: Illumina Mi-Seq 1x250

text: ASG 645


ASG 632

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CIMIC Universidad de los Andes

text: public

text: ASG 632

text: rainforest

characteristic: elevation

text: tree

characteristic: environmental medium

text: Colombia

text: actinobacteria

characteristic: local environmental context

text: Propioniferax innocua

characteristic: organism

characteristic: project name

text: Propioniferax innocua

text: Illumina Mi-Seq 1x250

characteristic: sequencing method

text: ASG 632

characteristic: title


ASG 493

characteristic: ENA-CHECKLIST

characteristic: External Id

text: CIMIC Universidad de los Andes

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ASG 493

characteristic: Submitter Id

text: rainforest

characteristic: collection date

characteristic: description

text: tree

text: Colombia

characteristic: geographic location (country and/or sea)

text: actinobacteria

text: Herrania purpurea

text: Herrania purpurea

text: Illumina Mi-Seq 1x250

text: ASG 493


ASG 548

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CIMIC Universidad de los Andes

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ASG 548

text: rainforest

characteristic: broad-scale environmental context

characteristic: depth

text: tree

text: Colombia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: actinobacteria

text: Herrania purpurea

text: Herrania purpurea

text: Illumina Mi-Seq 1x250

text: ASG 548


ASG 553

characteristic: ENA-CHECKLIST

text: CIMIC Universidad de los Andes

text: public

text: ASG 553

text: rainforest

characteristic: elevation

text: tree

characteristic: environmental medium

text: Colombia

text: actinobacteria

characteristic: local environmental context

text: Herrania purpurea

characteristic: organism

characteristic: project name

text: Herrania purpurea

text: Illumina Mi-Seq 1x250

characteristic: sequencing method

text: ASG 553

characteristic: title


ASG 618

characteristic: External Id

text: CIMIC Universidad de los Andes

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ASG 618

characteristic: Submitter Id

text: rainforest

characteristic: collection date

characteristic: description

text: tree

text: Colombia

characteristic: geographic location (country and/or sea)

text: actinobacteria

text: Herrania purpurea

text: Herrania purpurea

text: Illumina Mi-Seq 1x250

text: ASG 618


ASG 492

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CIMIC Universidad de los Andes

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ASG 492

text: rainforest

characteristic: broad-scale environmental context

characteristic: depth

text: tree

text: Colombia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: actinobacteria

text: Propioniferax innocua

text: Propioniferax innocua

text: Illumina Mi-Seq 1x250

text: ASG 492


ASG 494

characteristic: ENA-CHECKLIST

text: CIMIC Universidad de los Andes

text: public

text: ASG 494

text: rainforest

characteristic: elevation

text: tree

characteristic: environmental medium

text: Colombia

text: actinobacteria

characteristic: local environmental context

text: Propioniferax innocua

characteristic: organism

characteristic: project name

text: Propioniferax innocua

text: Illumina Mi-Seq 1x250

characteristic: sequencing method

text: ASG 494

characteristic: title


ASG 501

characteristic: External Id

text: CIMIC Universidad de los Andes

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ASG 501

characteristic: Submitter Id

text: rainforest

characteristic: collection date

characteristic: description

text: tree

text: Colombia

characteristic: geographic location (country and/or sea)

text: actinobacteria

text: Propioniferax innocua

text: Propioniferax innocua

text: Illumina Mi-Seq 1x250

text: ASG 501


ASG 605

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CIMIC Universidad de los Andes

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ASG 605

text: rainforest

characteristic: broad-scale environmental context

characteristic: depth

text: tree

text: Colombia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: actinobacteria

text: Propioniferax innocua

text: Propioniferax innocua

text: Illumina Mi-Seq 1x250

text: ASG 605


ASG 607

characteristic: ENA-CHECKLIST

text: CIMIC Universidad de los Andes

text: public

text: ASG 607

text: rainforest

characteristic: elevation

text: tree

characteristic: environmental medium

text: Colombia

text: actinobacteria

characteristic: local environmental context

text: Propioniferax innocua

characteristic: organism

characteristic: project name

text: Propioniferax innocua

text: Illumina Mi-Seq 1x250

characteristic: sequencing method

text: ASG 607

characteristic: title


ASG 629

characteristic: External Id

text: CIMIC Universidad de los Andes

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ASG 629

characteristic: Submitter Id

text: rainforest

characteristic: collection date

characteristic: description

text: tree

text: Colombia

characteristic: geographic location (country and/or sea)

text: actinobacteria

text: Propioniferax innocua

text: Propioniferax innocua

text: Illumina Mi-Seq 1x250

text: ASG 629


ASG 601

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CIMIC Universidad de los Andes

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ASG 601

text: rainforest

characteristic: broad-scale environmental context

characteristic: depth

text: tree

text: Colombia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: actinobacteria

text: Theobroma simiarum

text: Theobroma simiarum

text: Illumina Mi-Seq 1x250

text: ASG 601


ASG 604

characteristic: ENA-CHECKLIST

text: CIMIC Universidad de los Andes

text: public

text: ASG 604

text: rainforest

characteristic: elevation

text: tree

characteristic: environmental medium

text: Colombia

text: actinobacteria

characteristic: local environmental context

text: Theobroma simiarum

characteristic: organism

characteristic: project name

text: Theobroma simiarum

text: Illumina Mi-Seq 1x250

characteristic: sequencing method

text: ASG 604

characteristic: title


ASG 606

characteristic: External Id

text: CIMIC Universidad de los Andes

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ASG 606

characteristic: Submitter Id

text: rainforest

characteristic: collection date

characteristic: description

text: tree

text: Colombia

characteristic: geographic location (country and/or sea)

text: actinobacteria

text: Theobroma simiarum

text: Theobroma simiarum

text: Illumina Mi-Seq 1x250

text: ASG 606


ASG 630

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CIMIC Universidad de los Andes

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ASG 630

text: rainforest

characteristic: broad-scale environmental context

characteristic: depth

text: tree

text: Colombia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: actinobacteria

text: Theobroma simiarum

text: Theobroma simiarum

text: Illumina Mi-Seq 1x250

text: ASG 630


ASG 638

characteristic: ENA-CHECKLIST

text: CIMIC Universidad de los Andes

text: public

text: ASG 638

text: rainforest

characteristic: elevation

text: tree

characteristic: environmental medium

text: Colombia

text: actinobacteria

characteristic: local environmental context

text: Theobroma simiarum

characteristic: organism

characteristic: project name

text: Theobroma simiarum

text: Illumina Mi-Seq 1x250

characteristic: sequencing method

text: ASG 638

characteristic: title


ASG 639

characteristic: External Id

text: CIMIC Universidad de los Andes

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ASG 639

characteristic: Submitter Id

text: rainforest

characteristic: collection date

characteristic: description

text: tree

text: Colombia

characteristic: geographic location (country and/or sea)

text: actinobacteria

text: Theobroma simiarum

text: Theobroma simiarum

text: Illumina Mi-Seq 1x250

text: ASG 639


ASG 641

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CIMIC Universidad de los Andes

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ASG 641

text: rainforest

characteristic: broad-scale environmental context

characteristic: depth

text: tree

text: Colombia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: actinobacteria

text: Theobroma simiarum

text: Theobroma simiarum

text: Illumina Mi-Seq 1x250

text: ASG 641


ASG 647

characteristic: ENA-CHECKLIST

text: CIMIC Universidad de los Andes

text: public

text: ASG 647

text: rainforest

characteristic: elevation

text: tree

characteristic: environmental medium

text: Colombia

text: actinobacteria

characteristic: local environmental context

text: Theobroma simiarum

characteristic: organism

characteristic: project name

text: Theobroma simiarum

text: Illumina Mi-Seq 1x250

characteristic: sequencing method

text: ASG 647

characteristic: title


SAMIN0000052-TEST COVID

characteristic: External Id

text: KLE TEch

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: SAMIN0000052-TEST COVID

tag: Namespace:KLE TEch

characteristic: Submitter Id

text: TEST

characteristic: collecting institution

text: TEST

characteristic: collector name

characteristic: common name

text: TEST

characteristic: description

text: India

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host common name

text: not applicable

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

characteristic: host subject id

text: isolate

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: receipt date

text: active surveillance in response to outbreak

characteristic: sample capture status

text: TEST COVID


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KLE TEch

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: TESTasssaddasasd

characteristic: organism

text: assdsdfdchlul

characteristic: title


characteristic: INSDC first public

text: public

characteristic: SRA accession

tag: Namespace:Spanish National Center for Cardiovascular Research (CNIC)

characteristic: Submitter Id

unit: week

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: Protocols: 6 weeks old mice were treated with 5 daily injections (i.p.) 1 mg tamoxifen (T5648, MilliporeSigma) dissolved in corn oil to turn on TdTomato transgene in SMCs and allow lineage tracing of SMC-derived cells. Four weeks later, hypercholesterolemia was induced by an i.v. injection of rAAV8-D377Y-mPCSK9 virus particles (1 × 1011 vector genomes per mouse) followed by 16 weeks of High Fat diet (HF: S9167-E011, SNIFF Spezialdiäten GmbH, containing 25% fat with 8.9% coconut oil and 0.8% cholesterol) Mice are separated into two groups: treated with an high fat (HF) or a LDL-lowering diet (LF/ASO: low-fat diet combined with weekly injections (5 ug/g i.p.) of an antisense locked nucleic acid (LNA) oligonucleotide recognizing a sequence of apolipoprotein B (apoB) mRNA1). Mice were euthanized after 4 weeks or 12 weeks. The whole aortic arch (including ascending aorta, aortic arch and part of the descending thoracic aorta) was extracted and cleaned in situ for fat and surrounding tissues and pretreated with 2mg/ml collagenase II (Worthington LS004174) in Hanks’ balanced salt solution (HBSS) for 15 min at 37ºC to easy removal of the adventitia. Stripped arches from each group (HF and LF/ASO) were washed in HBSS, open longitudinally and cut in small pieces and then placed in 3ml of enzymatic solution containing 200 µg/ml Hyaluronidase (Sigma-Aldrich, H3506); 250 µg/ml Liberase (Roche, 291963) and 200 µg/ml DNase (SigmaAldrich, DN25) for 60 minutes at 37ºC. Non-digested tissue was disaggregated using a cut Pasteur pipet with rounded edges. Reactions were stopped by adding PBS with 0.5%BSA. The suspension was passed through a 70 µm pore filter to remove aggregates. Cells were collected by centrifugation and resuspended in 300 µl PBS+0.5%BSA. DAPI at 1 µg/ml final concentration and Draq5 (Thermo Scientific 65-0880-96) at 5 µM final concentration, were added for dead/live cells detection. Viable cells, positive for Draq5 and negative for DAPI, were sorted using a FACSAria Cell Sorter. Sorted cells were recounted and their viability checked on a Countess III cell counter (Thermofisher). Up to 16500 cells were loaded into each port of a Chromium Next GEM Chip G (10x Genomics) for single cell isolation and cDNA reverse transcription and amplification. Sequencing libraries were prepared using the Chromium Next GEM Single Cell 3' Kit v3.1 (10x Genomics) following the manufacturer instructions

characteristic: description

text: adult

characteristic: developmental stage

text: low fat diet

characteristic: diet

text: atherosclerosis

characteristic: disease

text: FVB-Tg(Myh11-icre/ERT2)1Soff/J;Cg-Gt(ROSA)26Sortm14(CAG-tdTomato)Hze/J

characteristic: genotype

text: Draq5-positive; DAPI-negative

characteristic: immunophenotype

text: pool 1

characteristic: individual

text: not applicable

text: Mus musculus

text: Mus musculus

text: aorta

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: ApoBInjected


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Spanish National Center for Cardiovascular Research (CNIC)

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: house mouse

text: adult

text: low fat diet

text: atherosclerosis

text: Draq5-positive; DAPI-negative

text: pool 3

text: not applicable

characteristic: isolate

text: Mus musculus

characteristic: organism

text: Mus musculus

text: aorta

text: Mus musculus

text: male

characteristic: title


characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: high fat diet

characteristic: diet

text: atherosclerosis

characteristic: disease

text: Draq5-positive; DAPI-negative

text: pool 2

text: not applicable

text: Mus musculus

text: Mus musculus

text: aorta

text: Mus musculus

text: male

text: HFDControl


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: ArrayExpress

text: house mouse

text: adult

text: high fat diet

text: atherosclerosis

characteristic: genotype

text: Draq5-positive; DAPI-negative

characteristic: immunophenotype

text: pool 4

characteristic: individual

text: not applicable

text: Mus musculus

text: Mus musculus

text: aorta

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Key Laboratory of Environmental and Applied Microbiology, CAS

characteristic: Submitter Id

text: Plateau

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: depth

characteristic: elevation

text: soil

characteristic: environmental medium

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: soil

characteristic: local environmental context

text: gut metagenome

characteristic: organism

text: corpse

characteristic: project name

text: gut metagenome

characteristic: sequencing method

text: corpse

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Key Laboratory of Environmental and Applied Microbiology, CAS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Plateau

text: soil

text: China

text: soil

text: gut metagenome

text: corpse

text: gut metagenome

text: corpse


text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Department of Biochemistry, Molecular, and Cellular Biology

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: Protocols: cell culture supernatant QIAamp Viral RNA Mini Kit cDNA libraries were prepared using random hexamer primers

characteristic: description

text: wild type genotype

characteristic: genotype

text: in vitro cell culture supernatant

characteristic: growth condition

text: not applicable

characteristic: isolate

text: Alkhumra hemorrhagic fever virus

text: Alkhumra hemorrhagic fever virus

text: whole organism

characteristic: organism part

text: Alkhumra hemorrhagic fever virus

text: Zaki

characteristic: strain


characteristic: ENA-CHECKLIST

text: Department of Biochemistry, Molecular, and Cellular Biology

text: public

text: ArrayExpress

text: wild type genotype

text: in vitro cell culture supernatant

text: not applicable

text: Alkhumra hemorrhagic fever virus

characteristic: organism

text: Alkhumra hemorrhagic fever virus

text: whole organism

text: Alkhumra hemorrhagic fever virus

text: Zaki

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: ArrayExpress

text: wild type genotype

text: in vitro cell culture supernatant

text: not applicable

text: Deer tick virus

text: Deer tick virus

text: whole organism

text: Deer tick virus


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: ArrayExpress

text: wild type genotype

text: in vitro cell culture supernatant

text: not applicable

text: Kyasanur Forest disease virus

text: Kyasanur Forest disease virus

text: whole organism

text: Kyasanur Forest disease virus


text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: wild type genotype

text: in vitro cell culture supernatant

text: not applicable

text: Langat virus

text: Langat virus

text: whole organism

text: Langat virus


text: public

text: ArrayExpress

characteristic: broker name

characteristic: description

text: wild type genotype

characteristic: genotype

text: in vitro cell culture supernatant

text: not applicable

text: Omsk hemorrhagic fever virus

text: Omsk hemorrhagic fever virus

text: whole organism

text: Omsk hemorrhagic fever virus

text: Guriev

text: OHFV


text: public

text: ArrayExpress

text: wild type genotype

text: in vitro cell culture supernatant

characteristic: growth condition

text: not applicable

characteristic: isolate

text: Powassan virus

text: Powassan virus

text: whole organism

characteristic: organism part

text: Powassan virus

text: LB


characteristic: ENA-CHECKLIST

text: public

text: ArrayExpress

text: wild type genotype

text: in vitro cell culture supernatant

text: not applicable

text: Powassan virus

characteristic: organism

text: Powassan virus

text: whole organism

text: Powassan virus

characteristic: strain


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: ArrayExpress

text: wild type genotype

text: in vitro cell culture supernatant

text: not applicable

text: Tick-borne encephalitis virus

text: Tick-borne encephalitis virus

text: whole organism

text: Tick-borne encephalitis virus

text: Hypr

text: CE-TBEV

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: wild type genotype

text: in vitro cell culture supernatant

text: not applicable

text: Tick-borne encephalitis virus

text: Tick-borne encephalitis virus

text: whole organism

text: Tick-borne encephalitis virus

text: Sofjin

text: FE-TBEV


text: RECETOX

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Czech Republic

text: metagenome

text: Indoor dust

text: dust metagenome

characteristic: primer

text: Household

text: dust metagenome

text: Indoor dust microbiome


text: RECETOX

text: public

characteristic: Submitter Id

text: Czech Republic

text: metagenome

text: Indoor dust

text: dust metagenome

text: Maternity hospital

text: dust metagenome

text: Indoor dust microbiome


text: RECETOX

text: public

text: Czech Republic

text: metagenome

text: Indoor dust

text: dust metagenome

text: Children's hospital

text: dust metagenome

text: Indoor dust microbiome


text: RECETOX

text: public

text: Czech Republic

text: metagenome

text: Indoor dust

text: dust metagenome

text: Office

text: dust metagenome

text: Indoor dust microbiome


text: RECETOX

text: public

text: Nasopharyngeal swab

text: Czech Republic

text: Homo sapiens

characteristic: host scientific name

text: metagenome

text: Nasopharynx

text: human nasopharyngeal metagenome

text: human nasopharyngeal metagenome

text: Female

characteristic: sex

text: Human nasopharyngeal microbiome

text: Maternity hospital

characteristic: workplace


characteristic: ENA-CHECKLIST

text: RECETOX

text: public

text: Nasopharyngeal swab

text: Czech Republic

text: Homo sapiens

text: metagenome

text: Nasopharynx

text: human nasopharyngeal metagenome

text: human nasopharyngeal metagenome

text: Male

text: Human nasopharyngeal microbiome

text: Maternity hospital


text: RECETOX

text: public

text: Nasopharyngeal swab

text: Czech Republic

text: Homo sapiens

text: metagenome

text: Nasopharynx

text: human nasopharyngeal metagenome

characteristic: organism

text: human nasopharyngeal metagenome

text: Male

text: Human nasopharyngeal microbiome

text: Children's hospital


text: RECETOX

text: public

text: Nasopharyngeal swab

text: Czech Republic

text: Homo sapiens

text: metagenome

text: Nasopharynx

text: human nasopharyngeal metagenome

text: human nasopharyngeal metagenome

text: Female

text: Human nasopharyngeal microbiome

text: Children's hospital


text: RECETOX

text: public

text: Nasopharyngeal swab

text: Czech Republic

text: Homo sapiens

text: metagenome

text: Nasopharynx

text: human nasopharyngeal metagenome

text: human nasopharyngeal metagenome

text: Female

text: Human nasopharyngeal microbiome

text: Office


text: RECETOX

text: public

text: Nasopharyngeal swab

text: Czech Republic

text: Homo sapiens

text: metagenome

text: Nasopharynx

text: human nasopharyngeal metagenome

text: human nasopharyngeal metagenome

text: Male

text: Human nasopharyngeal microbiome

text: Office


text: public

tag: Namespace:Max Planck Institute for Developmental Biology

text: Single plant

characteristic: description

characteristic: estimated size

text: Germany

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: glasshouse

characteristic: growth facility

text: 23C 8 h daytime, 18C 16 h nighttime.

characteristic: isolation and growth condition

characteristic: number of replicons

text: Alopecurus myosuroides

text: blackgrass

characteristic: organism common name

text: leaf development

characteristic: plant developmental stage

text: Standard substrate (Pikiererde Typ CL P , Cat.No EN12580, Einheitserde)

characteristic: plant growth medium

text: leaves

characteristic: plant structure

text: diploid

characteristic: ploidy

characteristic: population

text: healthy

characteristic: sample health state

text: Alopecurus myosuroides

text: not provided

characteristic: source material identifiers


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Max Planck Institute for Developmental Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Single plant

text: Germany

text: not collected

text: not collected

text: glasshouse

text: 23C 8 h daytime, 18C 16 h nighttime.

text: Alopecurus myosuroides

characteristic: organism

text: blackgrass

text: leaf development

text: leaves

text: diploid

text: healthy

text: Alopecurus myosuroides

text: not provided

characteristic: title


text: ETH ZURICH

text: public

tag: Namespace:ETH ZURICH

text: spades.py --meta

characteristic: assembly software

text: tetra-nucleotide frequencies and co-abundance, --minContig 2000 --maxEdges 500

characteristic: binning parameters

characteristic: binning software

text: metagenomic bin from biosample SAMEA4398247

characteristic: description

text: Ocean water

characteristic: environment (biome)

text: Ocean water

characteristic: environment (feature)

text: Ocean water

characteristic: environment (material)

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: ocean water

text: marine metagenome

characteristic: metagenomic source

text: marine metagenome

text: Biosynthetic potential of the global ocean microbiome

characteristic: project name

characteristic: sample derived from

text: marine metagenome

text: Illumina

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ETH ZURICH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: spades.py --meta

text: metagenomic bin from biosample SAMEA2622696

text: Ocean water

text: Ocean water

text: Ocean water

text: Pacific Ocean

text: metagenome

text: ocean water

text: marine metagenome

text: marine metagenome

characteristic: organism

text: marine metagenome

text: Illumina


text: ETH ZURICH

text: public

text: spades.py --meta

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

text: metagenomic bin from biosample SAMEA4397903

characteristic: description

text: Ocean water

characteristic: environment (biome)

text: Ocean water

characteristic: environment (feature)

text: Ocean water

characteristic: environment (material)

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: ocean water

text: marine metagenome

text: marine metagenome

text: marine metagenome

text: Illumina

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ETH ZURICH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: spades.py --meta

text: metagenomic bin from biosample SAMEA4396489

text: Ocean water

text: Ocean water

text: Ocean water

text: Atlantic Ocean

text: metagenome

characteristic: investigation type

text: ocean water

text: marine metagenome

characteristic: metagenomic source

text: marine metagenome

characteristic: project name

characteristic: sample derived from

text: marine metagenome

text: Illumina

characteristic: sequencing method


text: ETH ZURICH

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: spades.py --meta

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

text: metagenomic bin from biosample SAMEA2591108

characteristic: description

text: Ocean water

characteristic: environment (biome)

text: Ocean water

characteristic: environment (feature)

text: Ocean water

text: Mediterranean Sea

text: metagenome

text: ocean water

text: marine metagenome

text: marine metagenome

characteristic: organism

text: marine metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ETH ZURICH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: spades.py --meta

text: metagenomic bin from biosample SAMEA2623463

text: Ocean water

text: Ocean water

text: Ocean water

characteristic: environment (material)

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: ocean water

text: marine metagenome

text: marine metagenome

text: marine metagenome

text: Illumina

characteristic: title


text: ETH ZURICH

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: spades.py --meta

characteristic: assembly software

characteristic: binning parameters

text: metagenomic bin from biosample SAMEA2622048

text: Ocean water

text: Ocean water

text: Ocean water

text: Pacific Ocean

text: metagenome

characteristic: investigation type

text: ocean water

text: marine metagenome

characteristic: metagenomic source

text: marine metagenome

characteristic: project name

characteristic: sample derived from

text: marine metagenome

text: Illumina

characteristic: sequencing method


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ETH ZURICH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: spades.py --meta

characteristic: binning software

text: metagenomic bin from biosample SAMEA4397215

characteristic: description

text: Ocean water

characteristic: environment (biome)

text: Ocean water

characteristic: environment (feature)

text: Ocean water

text: Arctic Ocean

text: metagenome

text: ocean water

text: marine metagenome

text: marine metagenome

characteristic: organism

text: marine metagenome

text: Illumina


text: ETH ZURICH

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: spades.py --meta

characteristic: assembly software

characteristic: binning parameters

text: metagenomic bin from biosample SAMEA2621020

text: Ocean water

text: Ocean water

text: Ocean water

characteristic: environment (material)

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: ocean water

text: marine metagenome

text: marine metagenome

text: marine metagenome

text: Illumina

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ETH ZURICH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: spades.py --meta

text: metagenomic bin from biosample SAMN07137002

text: Ocean water

text: Ocean water

text: Ocean water

text: Pacific Ocean

text: metagenome

characteristic: investigation type

text: ocean water

text: marine metagenome

characteristic: metagenomic source

text: marine metagenome

characteristic: project name

characteristic: sample derived from

text: marine metagenome

text: Illumina

characteristic: sequencing method


text: ETH ZURICH

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: spades.py --meta

characteristic: assembly software

characteristic: binning parameters

characteristic: binning software

text: metagenomic bin from biosample SAMEA2623826

characteristic: description

text: Ocean water

characteristic: environment (biome)

text: Ocean water

characteristic: environment (feature)

text: Ocean water

text: Atlantic Ocean

text: metagenome

text: ocean water

text: marine metagenome

text: marine metagenome

characteristic: organism

text: marine metagenome

text: Illumina


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: ETH ZURICH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: spades.py --meta

text: metagenomic bin from biosample SAMEA4398370

text: Ocean water

text: Ocean water

text: Ocean water

characteristic: environment (material)

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: ocean water

text: marine metagenome

text: marine metagenome

text: marine metagenome

text: Illumina

characteristic: title


text: ETH ZURICH

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

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