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text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal distal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: intestine environment

text: host-associated

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text: Germany:Duesseldorf

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characteristic: geographic location (country and/or sea)

text: Mus musculus

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text: UBERON:gastrointestinal system

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text: colon content

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characteristic: title


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text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: animal-associated habitat

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characteristic: geographic location (country and/or sea)

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text: colon content

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text: Influence of the genetic background on murine gut microbiome composition and diversity over five generations

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characteristic: ENA-CHECKLIST

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text: UCSDMI

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characteristic: geographic location (country and/or sea)

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text: UCSDMI

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characteristic: latitude

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text: mouse skin metagenome

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text: UCSDMI

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text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

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text: urban biome

text: animal-associated habitat

text: sebum material

text: host-associated

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text: Germany:Duesseldorf

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characteristic: geographic location (country and/or sea)

text: Mus musculus

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text: UCSDMI

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text: Host-associated

text: Host-associated (non-saline)

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text: sebum material

text: host-associated

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text: Germany:Duesseldorf

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characteristic: geographic location (country and/or sea)

text: Mus musculus

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text: UBERON:skin

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characteristic: External Id

text: UCSDMI

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text: Host-associated

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text: urban biome

text: animal-associated habitat

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text: Germany:Duesseldorf

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text: Mus musculus

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text: UCSDMI

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characteristic: country

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text: animal-associated habitat

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characteristic: facility

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characteristic: latitude

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text: mouse skin metagenome

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characteristic: sex

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text: UCSDMI

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characteristic: Submitter Id

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text: Host-associated

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text: animal-associated habitat

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text: not applicable

text: Germany:Duesseldorf

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characteristic: geographic location (country and/or sea)

text: Mus musculus

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text: UBERON:gastrointestinal system

text: UBERON:lumen of gut

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characteristic: organism

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characteristic: External Id

text: UCSDMI

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text: public

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text: eppi

text: tweezers

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text: Host-associated

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text: urban biome

text: animal-associated habitat

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text: Mus musculus

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text: TRUE

text: colon content

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text: mouse gut metagenome

text: nmol/well

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text: UCSDMI

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text: not applicable

text: not applicable

text: eppi

text: tweezers

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characteristic: country

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characteristic: elevation

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

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text: urban biome

text: animal-associated habitat

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characteristic: facility

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characteristic: generation

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characteristic: host scientific name

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characteristic: latitude

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text: UCSDMI

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characteristic: collection date

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characteristic: description

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text: Host-associated

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text: urban biome

text: animal-associated habitat

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text: False

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text: France:Janvier

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characteristic: geographic location (country and/or sea)

text: Mus musculus

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text: UBERON:gastrointestinal system

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characteristic: organism

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text: colon content

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characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

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text: not applicable

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text: eppi

text: tweezers

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text: TRUE

text: Host-associated

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text: Animal (non-saline)

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text: animal-associated habitat

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text: Mus musculus

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text: nmol/well

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text: UCSDMI

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text: not applicable

text: eppi

text: tweezers

text: France

characteristic: country

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characteristic: elevation

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal distal gut (non-saline)

text: urban biome

text: animal-associated habitat

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text: not applicable

characteristic: facility

text: False

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characteristic: generation

text: France:Janvier

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text: Mus musculus

characteristic: host scientific name

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characteristic: latitude

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characteristic: longitude

text: False

text: mouse gut metagenome

text: not applicable

text: dna in freezer03.140

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text: colon content

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text: nmol/well

text: male

characteristic: sex


text: UCSDMI

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: batch

text: not applicable

text: not applicable

text: not applicable

characteristic: collection date

text: eppi

text: tweezers

text: Germany

text: not provided

characteristic: description

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text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal distal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: intestine environment

text: host-associated

text: not applicable

text: False

text: not applicable

text: Germany:Duesseldorf

text: Germany

characteristic: geographic location (country and/or sea)

text: Mus musculus

text: weeks

text: UBERON:gastrointestinal system

text: UBERON:lumen of gut

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text: False

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characteristic: organism

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text: dna in freezer03.140

text: TRUE

text: colon content

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text: nmol/well

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characteristic: title


characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

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characteristic: INSDC last update

text: public

characteristic: INSDC status

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text: not applicable

text: not applicable

text: eppi

text: tweezers

text: Germany

text: not provided

text: TRUE

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal distal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: intestine environment

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text: not applicable

text: False

text: not applicable

text: Germany:Duesseldorf

text: Germany

text: Mus musculus

text: weeks

text: UBERON:gastrointestinal system

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text: UBERON:colon

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text: False

text: mouse gut metagenome

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text: dna in freezer03.140

text: TRUE

text: colon content

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text: mouse gut metagenome

text: nmol/well

text: male


text: UCSDMI

text: public

text: not applicable

text: not applicable

text: not applicable

text: eppi

text: tweezers

text: Germany

characteristic: country

text: not provided

text: TRUE

characteristic: elevation

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal secretion (non-saline)

text: urban biome

text: animal-associated habitat

text: bodily fluid

text: host-associated

text: not applicable

characteristic: facility

text: False

text: not applicable

characteristic: generation

text: Germany:Duesseldorf

text: Germany

text: Mus musculus

characteristic: host scientific name

text: weeks

text: UBERON:respiratory system

text: UBERON:parenchyma

text: UBERON:lung

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text: grams

text: ZETT

characteristic: latitude

text: not applicable

characteristic: longitude

text: False

text: lung metagenome

text: not applicable

text: dna in freezer03.140

text: TRUE

text: left lung

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text: nmol/well

text: female

characteristic: sex

text: Lung screening


text: UCSDMI

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: batch

text: not applicable

text: not applicable

text: not applicable

characteristic: collection date

text: eppi

text: tweezers

text: Germany

text: not provided

characteristic: description

text: TRUE

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal secretion (non-saline)

text: urban biome

text: animal-associated habitat

text: bodily fluid

text: host-associated

text: not applicable

text: False

text: not applicable

text: Germany:Duesseldorf

text: Germany

characteristic: geographic location (country and/or sea)

text: Mus musculus

text: weeks

text: UBERON:respiratory system

text: UBERON:parenchyma

text: UBERON:lung

text: mouse

text: balb/c

text: grams

text: ZETT

text: not applicable

text: False

text: lung metagenome

characteristic: organism

text: not applicable

text: dna in freezer03.140

text: TRUE

text: left lung

text: left lung

text: lung metagenome

text: nmol/well

text: male

characteristic: title

text: Lung screening


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not applicable

text: not applicable

text: not applicable

text: eppi

text: tweezers

text: Germany

text: not provided

text: TRUE

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal secretion (non-saline)

text: urban biome

text: animal-associated habitat

text: bodily fluid

text: host-associated

text: not applicable

text: False

text: not applicable

text: Germany:Duesseldorf

text: Germany

text: Mus musculus

text: weeks

text: UBERON:respiratory system

text: UBERON:parenchyma

text: UBERON:lung

text: mouse

text: grams

text: ZETT

text: not applicable

text: False

text: lung metagenome

text: not applicable

text: dna in freezer03.140

text: TRUE

text: left lung

text: left lung

text: lung metagenome

text: nmol/well

text: female

text: Lung screening


text: UCSDMI

text: public

text: not applicable

text: not applicable

text: not applicable

text: eppi

text: tweezers

text: Germany

characteristic: country

text: not provided

text: TRUE

characteristic: elevation

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal secretion (non-saline)

text: urban biome

text: animal-associated habitat

text: bodily fluid

text: host-associated

text: not applicable

characteristic: facility

text: False

text: not applicable

characteristic: generation

text: Germany:Duesseldorf

text: Germany

text: Mus musculus

characteristic: host scientific name

text: weeks

text: UBERON:respiratory system

text: UBERON:parenchyma

text: UBERON:lung

text: mouse

text: grams

text: ZETT

characteristic: latitude

text: not applicable

characteristic: longitude

text: False

text: lung metagenome

text: not applicable

text: dna in freezer03.140

text: TRUE

text: left lung

text: left lung

text: lung metagenome

text: nmol/well

text: female

characteristic: sex

text: Lung screening


text: UCSDMI

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: batch

text: not applicable

text: not applicable

text: not applicable

characteristic: collection date

text: eppi

text: tweezers

text: Germany

text: not provided

characteristic: description

text: TRUE

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal secretion (non-saline)

text: urban biome

text: animal-associated habitat

text: bodily fluid

text: host-associated

text: not applicable

text: False

text: not applicable

text: Germany:Duesseldorf

text: Germany

characteristic: geographic location (country and/or sea)

text: Mus musculus

text: weeks

text: UBERON:respiratory system

text: UBERON:parenchyma

text: UBERON:lung

text: mouse

text: grams

text: ZETT

text: not applicable

text: False

text: lung metagenome

characteristic: organism

text: not applicable

text: dna in freezer03.140

text: TRUE

text: left lung

text: left lung

text: lung metagenome

text: nmol/well

text: male

characteristic: title

text: Lung screening


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not applicable

text: not applicable

text: not applicable

text: eppi

text: tweezers

text: Germany

text: not provided

text: TRUE

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: animal-associated habitat

text: sebum material

text: host-associated

text: not applicable

text: False

text: not applicable

text: Germany:Duesseldorf

text: Germany

text: Mus musculus

text: weeks

text: UBERON:skin

text: UBERON:skin of external ear

text: UBERON:sebum

text: mouse

text: balb/c

text: grams

text: ZETT

text: not applicable

text: False

text: mouse skin metagenome

text: not applicable

text: dna in freezer03.140

text: TRUE

text: skin

text: skin of external ear

text: mouse skin metagenome

text: nmol/well

text: female

text: Skin screening


text: UCSDMI

text: public

text: not applicable

text: not applicable

text: not applicable

text: eppi

text: tweezers

text: Germany

characteristic: country

text: not provided

text: TRUE

characteristic: elevation

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: animal-associated habitat

text: sebum material

text: host-associated

text: not applicable

characteristic: facility

text: False

text: not applicable

characteristic: generation

text: Germany:Duesseldorf

text: Germany

text: Mus musculus

characteristic: host scientific name

text: weeks

text: UBERON:skin

text: UBERON:skin of external ear

text: UBERON:sebum

text: mouse

text: balb/c

text: grams

text: ZETT

characteristic: latitude

text: not applicable

characteristic: longitude

text: False

text: mouse skin metagenome

text: not applicable

text: dna in freezer03.140

text: TRUE

text: skin

text: skin of external ear

text: mouse skin metagenome

text: nmol/well

text: male

characteristic: sex

text: Skin screening


text: UCSDMI

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: batch

text: not applicable

text: not applicable

text: not applicable

characteristic: collection date

text: eppi

text: tweezers

text: Germany

text: not provided

characteristic: description

text: TRUE

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: animal-associated habitat

text: sebum material

text: host-associated

text: not applicable

text: False

text: not applicable

text: Germany:Duesseldorf

text: Germany

characteristic: geographic location (country and/or sea)

text: Mus musculus

text: weeks

text: UBERON:skin

text: UBERON:skin of external ear

text: UBERON:sebum

text: mouse

text: grams

text: ZETT

text: not applicable

text: False

text: mouse skin metagenome

characteristic: organism

text: not applicable

text: dna in freezer03.140

text: TRUE

text: skin

text: skin of external ear

text: mouse skin metagenome

text: nmol/well

text: female

characteristic: title

text: Skin screening


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not applicable

text: not applicable

text: not applicable

text: eppi

text: tweezers

text: Germany

text: not provided

text: TRUE

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: animal-associated habitat

text: sebum material

text: host-associated

text: not applicable

text: False

text: not applicable

text: Germany:Duesseldorf

text: Germany

text: Mus musculus

text: weeks

text: UBERON:skin

text: UBERON:skin of external ear

text: UBERON:sebum

text: mouse

text: grams

text: ZETT

text: not applicable

text: False

text: mouse skin metagenome

text: not applicable

text: dna in freezer03.140

text: TRUE

text: skin

text: skin of external ear

text: mouse skin metagenome

text: nmol/well

text: male

text: Skin screening


text: UCSDMI

text: public

text: not applicable

text: not applicable

text: not applicable

text: eppi

text: tweezers

text: Germany

characteristic: country

text: not provided

text: TRUE

characteristic: elevation

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: animal-associated habitat

text: sebum material

text: host-associated

text: not applicable

characteristic: facility

text: False

text: not applicable

characteristic: generation

text: Germany:Duesseldorf

text: Germany

text: Mus musculus

characteristic: host scientific name

text: weeks

text: UBERON:skin

text: UBERON:skin of external ear

text: UBERON:sebum

text: mouse

text: grams

text: ZETT

characteristic: latitude

text: not applicable

characteristic: longitude

text: False

text: mouse skin metagenome

text: not applicable

text: dna in freezer03.140

text: TRUE

text: skin

text: skin of external ear

text: mouse skin metagenome

text: nmol/well

text: male

characteristic: sex

text: Skin screening


text: UCSDMI

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: batch

text: not applicable

text: not applicable

text: not applicable

characteristic: collection date

text: eppi

text: tweezers

text: Germany

text: blank-sterile water

characteristic: description

text: FALSE

text: Control

text: Negative

text: Sterile water blank

text: Sterile water blank

text: urban biome

text: research facility

text: sterile water

text: misc environment

text: not applicable

text: False

text: not applicable

text: Germany:Duesseldorf

text: Germany

characteristic: geographic location (country and/or sea)

text: not applicable

text: not applicable

text: weeks

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: grams

text: ZETT

text: not necessary

text: not applicable

text: False

text: metagenome

characteristic: organism

text: not applicable

text: dna in freezer03.140

text: TRUE

text: control blank

text: sterile water

text: metagenome

text: not applicable

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not applicable

text: not applicable

text: not applicable

text: eppi

text: tweezers

text: not applicable

text: Germany

text: blank-sterile water

text: FALSE

text: Control

text: Negative

text: Sterile water blank

text: Sterile water blank

text: urban biome

text: research facility

text: sterile water

text: misc environment

text: spf

text: False

text: not applicable

text: Germany:Duesseldorf

text: Germany

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: ZETT

text: not necessary

text: not applicable

text: False

text: metagenome

text: not applicable

text: dna in freezer03.140

text: TRUE

text: control blank

text: sterile water

text: metagenome

text: not applicable


text: UCSDMI

text: public

text: not applicable

text: not applicable

text: not applicable

text: eppi

text: tweezers

text: not applicable

text: Germany

characteristic: country

text: blank-sterile water

text: FALSE

characteristic: elevation

text: Control

text: Negative

text: Sterile water blank

text: Sterile water blank

text: urban biome

text: research facility

text: sterile water

text: misc environment

text: spf

characteristic: facility

text: False

text: not applicable

characteristic: generation

text: Germany:Duesseldorf

text: Germany

text: not applicable

characteristic: host scientific name

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: ZETT

text: not necessary

characteristic: latitude

text: not applicable

characteristic: longitude

text: False

text: metagenome

text: not applicable

text: dna in freezer03.140

text: TRUE

text: control blank

text: sterile water

text: metagenome

text: not applicable

characteristic: sex


text: UCSDMI

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: batch

text: not applicable

text: not applicable

text: not applicable

characteristic: collection date

text: eppi

text: faces pellet

text: not applicable

text: Germany

text: monkey faces

characteristic: description

text: TRUE

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal distal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: intestine environment

text: host-associated

text: spf

text: False

text: not applicable

text: Germany:Duesseldorf

text: Germany

characteristic: geographic location (country and/or sea)

text: Callithrix jacchus

text: not provided

text: weeks

text: UBERON:gastrointestinal system

text: UBERON:lumen of gut

text: UBERON:colon

text: marmoset

text: marmoset

text: not provided

text: grams

text: ZETT

text: not necessary

text: not provided

text: False

text: gut metagenome

characteristic: organism

text: dna in freezer03.140

text: TRUE

text: colon content

text: colon content

text: gut metagenome

text: not provided

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not applicable

text: not applicable

text: not applicable

text: eppi

text: faces pellet

text: not applicable

text: Germany

text: monkey faces

text: TRUE

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal distal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: intestine environment

text: host-associated

text: spf

text: False

text: not applicable

text: Germany:Duesseldorf

text: Germany

text: Callithrix jacchus

text: not provided

text: weeks

text: UBERON:gastrointestinal system

text: UBERON:lumen of gut

text: UBERON:colon

text: marmoset

text: marmoset

text: not provided

text: grams

text: ZETT

text: not necessary

text: not provided

text: False

text: gut metagenome

text: dna in freezer03.140

text: TRUE

text: colon content

text: colon content

text: gut metagenome

text: not provided


text: SC

text: public

text: SC

characteristic: broker name

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Samples prepared at Virology Department, Royal Infirmary of Edinburgh, NHS Lothian / School of Biological Sciences, University of Edinburgh by McHugh M, Dewar R, Rooke S, O'Toole Á, Scher E, Hill V, McCrone JT, Colquhoun R, Yu X, Jackson B, Rambaut A, Templeton K and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: Scotland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: SC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SC

text: Virology Department, Royal Infirmary of Edinburgh, NHS Lothian / School of Biological Sciences, University of Edinburgh

characteristic: collection date

text: not provided

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Scotland

text: Human

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: SC

characteristic: broker name

text: Lighthouse Lab in Glasgow

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Samples prepared at Lighthouse Lab in Glasgow by Harper VanSteenhouse, Yumi Kasai, David Gray, Carol Clugston, Anna Dominiczak and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (https://www.sanger.ac.uk/covid-team)

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

text: Human

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Statens Serum Institut

text: public

characteristic: SRA accession

tag: Namespace:Statens Serum Institut

text: building

characteristic: broad-scale environmental context

unit: m

characteristic: depth

text: wastewater

characteristic: environmental medium

text: Denmark

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: wastewater treatment plant

characteristic: local environmental context

text: SARS-CoV-2 wastewater Illumina sequencing, Denmark

characteristic: project name

text: Illumina

characteristic: sequencing method


characteristic: External Id

text: Candiolo Cancer Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Candiolo Cancer Institute

characteristic: Submitter Id

characteristic: collection date

text: human

characteristic: common name

text: KP363T cell line infected with colibactin-producing E.coli until the emergence of a tolerant phenotype. This represents the first of three independent RNA samples sequenced for gene set enrichment analysis.

characteristic: description

text: Italy

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: KP363T COLIBACTIN-TOLERANT CELLS INDEPENDENT RNA SAMPLE A

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Candiolo Cancer Institute

text: public

characteristic: SRA accession

text: human

text: KP363T cell line infected with colibactin-producing E.coli until the emergence of a tolerant phenotype. This represents the second of three independent RNA samples sequenced for gene set enrichment analysis.

text: Italy

text: Homo sapiens

text: Homo sapiens

text: KP363T COLIBACTIN-TOLERANT CELLS INDEPENDENT RNA SAMPLE B


text: Candiolo Cancer Institute

text: public

text: human

text: KP363T cell line infected with colibactin-producing E.coli until the emergence of a tolerant phenotype. This represents the third of three independent RNA samples sequenced for gene set enrichment analysis.

text: Italy

text: Homo sapiens

text: Homo sapiens

text: KP363T COLIBACTIN-TOLERANT CELLS INDEPENDENT RNA SAMPLE C


text: Candiolo Cancer Institute

text: public

text: human

text: KP363T cell line infected with empty vector E.coli for the same number of infections as their colibactin-tolerant counterpart. This represents the first of three independent RNA samples sequenced for gene set enrichment analysis.

text: Italy

text: Homo sapiens

text: Homo sapiens

text: KP363T EMPTY LONG-TERM CELLS INDEPENDENT RNA SAMPLE A


text: Candiolo Cancer Institute

text: public

text: human

text: KP363T cell line infected with empty vector E.coli for the same number of infections as their colibactin-tolerant counterpart. This represents the second of three independent RNA samples sequenced for gene set enrichment analysis.

text: Italy

text: Homo sapiens

text: Homo sapiens

text: KP363T EMPTY LONG-TERM CELLS INDEPENDENT RNA SAMPLE B


text: Candiolo Cancer Institute

text: public

text: human

text: KP363T cell line infected with empty vector E.coli for the same number of infections as their colibactin-tolerant counterpart. This represents the third of three independent RNA samples sequenced for gene set enrichment analysis.

text: Italy

text: Homo sapiens

text: Homo sapiens

text: KP363T EMPTY LONG-TERM CELLS INDEPENDENT RNA SAMPLE C


text: TUBS-IPB

text: public

text: controlled environment (climate chamber)

characteristic: broad-scale environmental context

text: Set C Bulk Soil replicate 1

text: soil (artificial substrate mixture of potting compost, sand, vermiculite, fertilizer)

characteristic: environmental medium

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm pot experiment

characteristic: local environmental context

text: ACAGTG,ATGAGC

characteristic: multiplex identifiers

text: Fast DNA SpinKit for Soil, MP Biomedicals, Germany

characteristic: nucleic acid extraction

text: soil metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

text: Amplicon sequencing of 16S rRNA gene fragments of Arabidopsis Rhizosphere

characteristic: project name

text: homogenizing substrate mixture by stirring, sampling approximately 1.5 g

characteristic: sample collection method

text: soil metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set C Bulk Soil replicate 2

characteristic: description

text: Germany

characteristic: geographic location (country and/or sea)

text: mesocosm pot experiment

text: GCCAAT,ATGAGC

text: soil metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: soil metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set C Bulk Soil replicate 3

characteristic: environmental medium

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm pot experiment

characteristic: local environmental context

text: ATGTCA,ATGAGC

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: soil metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

characteristic: project name

text: soil metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set C Bulk Soil replicate 4

text: Germany

text: mesocosm pot experiment

text: ACTTGA,ATGAGC

text: soil metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: sample collection method

text: soil metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set C Bulk Soil replicate 5

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm pot experiment

characteristic: local environmental context

text: GATCAG,ATGAGC

text: soil metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: soil metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set C Col-0 replicate 1

text: Germany

unit: weeks

characteristic: host age

text: Arabidopsis thaliana

characteristic: host common name

text: Col-0 wildtype

characteristic: host genotype

characteristic: host taxid

text: mesocosm pot experiment planted with Arabidopsis thaliana

text: TAGCTT,ATGAGC

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: rhizosphere metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

text: rhizosphere

characteristic: plant product

characteristic: project name

text: vigurously shaking root cluster, removing roots by vortexing, centrifuging to obtain rhizsophere pellet

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set C Col-0 replicate 2

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Arabidopsis thaliana

text: Col-0 wildtype

characteristic: local environmental context

text: GGCTAC,ATGAGC

text: rhizosphere metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: rhizosphere

characteristic: sample collection method

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set C Col-0 replicate 3

text: Germany

characteristic: host age

text: Arabidopsis thaliana

characteristic: host common name

text: Col-0 wildtype

characteristic: host genotype

characteristic: host taxid

text: ACAGTG,ACTGAT

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: rhizosphere metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

text: rhizosphere

characteristic: plant product

characteristic: project name

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set C Col-0 replicate 4

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Arabidopsis thaliana

text: Col-0 wildtype

characteristic: local environmental context

text: ATGTCA,ACTGAT

text: rhizosphere metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: rhizosphere

characteristic: sample collection method

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set C Col-0 replicate 5

text: Germany

characteristic: host age

text: Arabidopsis thaliana

characteristic: host common name

text: Col-0 wildtype

characteristic: host genotype

characteristic: host taxid

text: ACTTGA,ACTGAT

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: rhizosphere metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

text: rhizosphere

characteristic: plant product

characteristic: project name

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set C cyp replicate 1

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Arabidopsis thaliana

text: cyp79b2 cyp79b3

characteristic: local environmental context

text: GATCAG,ACTGAT

text: rhizosphere metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: rhizosphere

characteristic: sample collection method

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set C cyp replicate 2

text: Germany

characteristic: host age

text: Arabidopsis thaliana

characteristic: host common name

text: cyp79b2 cyp79b3

characteristic: host genotype

characteristic: host taxid

text: TAGCTT,ACTGAT

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: rhizosphere metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

text: rhizosphere

characteristic: plant product

characteristic: project name

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set C cyp replicate 3

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Arabidopsis thaliana

text: cyp79b2 cyp79b3

characteristic: local environmental context

text: GGCTAC,ACTGAT

text: rhizosphere metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: rhizosphere

characteristic: sample collection method

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set C cyp replicate 4

text: Germany

characteristic: host age

text: Arabidopsis thaliana

characteristic: host common name

text: cyp79b2 cyp79b3

characteristic: host genotype

characteristic: host taxid

text: CTTGTA,ACTGAT

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: rhizosphere metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

text: rhizosphere

characteristic: plant product

characteristic: project name

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set C cyp replicate 5

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Arabidopsis thaliana

text: cyp79b2 cyp79b3

characteristic: local environmental context

text: ATCACG,ATGAGC

text: rhizosphere metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: rhizosphere

characteristic: sample collection method

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set C myb replicate 1

text: Germany

characteristic: host age

text: Arabidopsis thaliana

characteristic: host common name

text: myb28 myb29

characteristic: host genotype

characteristic: host taxid

text: CGATGT,ATGAGC

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: rhizosphere metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

text: rhizosphere

characteristic: plant product

characteristic: project name

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set C myb replicate 2

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Arabidopsis thaliana

text: myb28 myb29

characteristic: local environmental context

text: AGTCAA,ATGAGC

text: rhizosphere metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: rhizosphere

characteristic: sample collection method

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set C myb replicate 3

text: Germany

characteristic: host age

text: Arabidopsis thaliana

characteristic: host common name

text: myb28 myb29

characteristic: host genotype

characteristic: host taxid

text: TGACCA,ATGAGC

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: rhizosphere metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

text: rhizosphere

characteristic: plant product

characteristic: project name

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set C myb replicate 4

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Arabidopsis thaliana

text: myb28 myb29

characteristic: local environmental context

text: ACAGTG,ATGAGC

text: rhizosphere metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: rhizosphere

characteristic: sample collection method

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set C myb replicate 5

text: Germany

characteristic: host age

text: Arabidopsis thaliana

characteristic: host common name

text: myb28 myb29

characteristic: host genotype

characteristic: host taxid

text: GCCAAT,ATGAGC

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: rhizosphere metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

text: rhizosphere

characteristic: plant product

characteristic: project name

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set C qKO replicate 2

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Arabidopsis thaliana

text: cyp79b2 cyp79b3 myb28 myb29

characteristic: local environmental context

text: ATGTCA,ATGAGC

text: rhizosphere metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: rhizosphere

characteristic: sample collection method

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set C qKO replicate 3

text: Germany

characteristic: host age

text: Arabidopsis thaliana

characteristic: host common name

text: cyp79b2 cyp79b3 myb28 myb29

characteristic: host genotype

characteristic: host taxid

text: ACTTGA,ATGAGC

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: rhizosphere metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

text: rhizosphere

characteristic: plant product

characteristic: project name

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set C qKO replicate 4

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Arabidopsis thaliana

text: cyp79b2 cyp79b3 myb28 myb29

characteristic: local environmental context

text: GATCAG,ATGAGC

text: rhizosphere metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: rhizosphere

characteristic: sample collection method

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set C qKO replicate 5

text: Germany

characteristic: host age

text: Arabidopsis thaliana

characteristic: host common name

text: cyp79b2 cyp79b3 myb28 myb29

characteristic: host genotype

characteristic: host taxid

text: TAGCTT,ATGAGC

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: rhizosphere metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

text: rhizosphere

characteristic: plant product

characteristic: project name

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set B Bulk Soil replicate 1

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm pot experiment

characteristic: local environmental context

text: AGTCAA,CAAAAG

text: soil metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: sample collection method

text: soil metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set B Bulk Soil replicate 2

text: Germany

text: mesocosm pot experiment

text: TGACCA,CAAAAG

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: soil metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

characteristic: project name

text: soil metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set B Bulk Soil replicate 3

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm pot experiment

characteristic: local environmental context

text: ACAGTG,CAAAAG

text: soil metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: sample collection method

text: soil metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set B Bulk Soil replicate 4

text: Germany

text: mesocosm pot experiment

text: GCCAAT,CAAAAG

text: soil metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: soil metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set B Bulk Soil replicate 5

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: mesocosm pot experiment

text: ATGTCA,CAAAAG

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: soil metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

characteristic: project name

text: soil metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set B Col-0 replicate 1

text: Germany

characteristic: geographic location (longitude)

characteristic: host age

text: Arabidopsis thaliana

characteristic: host common name

text: Col-0 wildtype

characteristic: host genotype

characteristic: host taxid

characteristic: local environmental context

text: ACTTGA,CAAAAG

text: rhizosphere metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: rhizosphere

characteristic: plant product

characteristic: sample collection method

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set B Col-0 replicate 2

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Arabidopsis thaliana

text: Col-0 wildtype

text: GATCAG,CAAAAG

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: rhizosphere metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

text: rhizosphere

characteristic: project name

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set B Col-0 replicate 3

text: Germany

characteristic: geographic location (longitude)

characteristic: host age

text: Arabidopsis thaliana

characteristic: host common name

text: Col-0 wildtype

characteristic: host genotype

characteristic: host taxid

characteristic: local environmental context

text: TAGCTT,CAAAAG

text: rhizosphere metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: rhizosphere

characteristic: plant product

characteristic: sample collection method

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set B Col-0 replicate 4

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Arabidopsis thaliana

text: Col-0 wildtype

text: GGCTAC,CAAAAG

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: rhizosphere metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

text: rhizosphere

characteristic: project name

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set B Col-0 replicate 5

text: Germany

characteristic: geographic location (longitude)

characteristic: host age

text: Arabidopsis thaliana

characteristic: host common name

text: Col-0 wildtype

characteristic: host genotype

characteristic: host taxid

characteristic: local environmental context

text: CTTGTA,CAAAAG

text: rhizosphere metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: rhizosphere

characteristic: plant product

characteristic: sample collection method

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set B nsp1 replicate 1

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Arabidopsis thaliana

text: ATCACG,CAACTA

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: rhizosphere metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

text: rhizosphere

characteristic: project name

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set B nsp1 replicate 2

text: Germany

characteristic: geographic location (longitude)

characteristic: host age

text: Arabidopsis thaliana

characteristic: host common name

characteristic: host genotype

characteristic: host taxid

characteristic: local environmental context

text: CGATGT,CAACTA

text: rhizosphere metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: rhizosphere

characteristic: plant product

characteristic: sample collection method

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set B nsp1 replicate 3

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Arabidopsis thaliana

text: AGTCAA,CAACTA

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: rhizosphere metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

text: rhizosphere

characteristic: project name

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set B nsp1 replicate 4

text: Germany

characteristic: geographic location (longitude)

characteristic: host age

text: Arabidopsis thaliana

characteristic: host common name

characteristic: host genotype

characteristic: host taxid

characteristic: local environmental context

text: ACTTGA,ATTCCT

text: rhizosphere metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: rhizosphere

characteristic: plant product

characteristic: sample collection method

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set B nsp1 replicate 5

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Arabidopsis thaliana

text: GATCAG,ATTCCT

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: rhizosphere metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

text: rhizosphere

characteristic: project name

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set B nsp3 replicate 1

text: Germany

characteristic: geographic location (longitude)

characteristic: host age

text: Arabidopsis thaliana

characteristic: host common name

characteristic: host genotype

characteristic: host taxid

characteristic: local environmental context

text: TAGCTT,ATTCCT

text: rhizosphere metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: rhizosphere

characteristic: plant product

characteristic: sample collection method

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set B nsp3 replicate 2

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Arabidopsis thaliana

text: GGCTAC,ATTCCT

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: rhizosphere metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

text: rhizosphere

characteristic: project name

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set B nsp3 replicate 3

text: Germany

characteristic: geographic location (longitude)

characteristic: host age

text: Arabidopsis thaliana

characteristic: host common name

characteristic: host genotype

characteristic: host taxid

characteristic: local environmental context

text: CTTGTA,ATTCCT

text: rhizosphere metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: rhizosphere

characteristic: plant product

characteristic: sample collection method

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set B nsp3 replicate 4

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Arabidopsis thaliana

text: CTTGTA,ACTGAT

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: rhizosphere metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

text: rhizosphere

characteristic: project name

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set B nsp3 replicate 5

text: Germany

characteristic: geographic location (longitude)

characteristic: host age

text: Arabidopsis thaliana

characteristic: host common name

characteristic: host genotype

characteristic: host taxid

characteristic: local environmental context

text: CGATGT,CAAAAG

text: rhizosphere metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: rhizosphere

characteristic: plant product

characteristic: sample collection method

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set A Bulk Soil replicate 1

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: mesocosm pot experiment

text: AGTCAA,CAAAAG

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: soil metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

characteristic: project name

text: soil metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set A Bulk Soil replicate 2

text: Germany

characteristic: geographic location (longitude)

text: mesocosm pot experiment

characteristic: local environmental context

text: TGACCA,CAAAAG

text: soil metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: sample collection method

text: soil metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set A Bulk Soil replicate 3

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: mesocosm pot experiment

text: ACAGTG,CAAAAG

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: soil metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

characteristic: project name

text: soil metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set A Bulk Soil replicate 4

text: Germany

text: mesocosm pot experiment

text: GCCAAT,CAAAAG

text: soil metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: soil metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set A Bulk Soil replicate 5

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: mesocosm pot experiment

characteristic: local environmental context

text: ATGTCA,CAAAAG

text: soil metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: sample collection method

text: soil metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set A Col-0 replicate 1

text: Germany

characteristic: host age

text: Arabidopsis thaliana

characteristic: host common name

text: Col-0 wildtype

characteristic: host genotype

characteristic: host taxid

text: ACTTGA,CAAAAG

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: rhizosphere metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

text: rhizosphere

characteristic: plant product

characteristic: project name

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set A Col-0 replicate 2

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Arabidopsis thaliana

text: Col-0 wildtype

characteristic: local environmental context

text: GATCAG,CAAAAG

text: rhizosphere metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: rhizosphere

characteristic: sample collection method

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set A Col-0 replicate 3

text: Germany

characteristic: host age

text: Arabidopsis thaliana

characteristic: host common name

text: Col-0 wildtype

characteristic: host genotype

characteristic: host taxid

text: TAGCTT,CAAAAG

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: rhizosphere metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

text: rhizosphere

characteristic: plant product

characteristic: project name

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set A Col-0 replicate 4

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Arabidopsis thaliana

text: Col-0 wildtype

characteristic: local environmental context

text: GGCTAC,CAAAAG

text: rhizosphere metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: rhizosphere

characteristic: sample collection method

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set A Col-0 replicate 5

text: Germany

characteristic: host age

text: Arabidopsis thaliana

characteristic: host common name

text: Col-0 wildtype

characteristic: host genotype

characteristic: host taxid

text: CTTGTA,CAAAAG

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: rhizosphere metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

text: rhizosphere

characteristic: plant product

characteristic: project name

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set A nsp134 replicate 1

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Arabidopsis thaliana

characteristic: local environmental context

text: ATCACG,ATGAGC

text: rhizosphere metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: rhizosphere

characteristic: sample collection method

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set A nsp134 replicate 2

text: Germany

characteristic: host age

text: Arabidopsis thaliana

characteristic: host common name

characteristic: host genotype

characteristic: host taxid

text: CGATGT,CAACTA

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: rhizosphere metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

text: rhizosphere

characteristic: plant product

characteristic: project name

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set A nsp134 replicate 3

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Arabidopsis thaliana

characteristic: local environmental context

text: AGTCAA,CAACTA

text: rhizosphere metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: rhizosphere

characteristic: sample collection method

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: TUBS-IPB

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

characteristic: collection date

text: Set A nsp134 replicate 4

text: Germany

characteristic: host age

text: Arabidopsis thaliana

characteristic: host common name

characteristic: host genotype

characteristic: host taxid

text: TGACCA,CAACTA

characteristic: multiplex identifiers

characteristic: nucleic acid extraction

text: rhizosphere metagenome

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

characteristic: pcr primers

text: rhizosphere

characteristic: plant product

characteristic: project name

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

text: 16S rRNA

text: V3-V4 on 16S rRNA


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TUBS-IPB

text: public

characteristic: SRA accession

characteristic: broad-scale environmental context

text: Set A nsp134 replicate 5

characteristic: description

characteristic: environmental medium

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Arabidopsis thaliana

characteristic: local environmental context

text: ACAGTG,CAACTA

text: rhizosphere metagenome

characteristic: organism

text: CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT

text: rhizosphere

text: vigorously shaking root cluster, removing roots by vortexing, centrifuging to obtain rhizosphere pellet

characteristic: sample collection method

text: rhizosphere metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: 16S rRNA

characteristic: target gene

text: V3-V4 on 16S rRNA

characteristic: target subfragment

characteristic: title