characteristic: ENA-CHECKLIST

text: MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 118

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Ilumatobacter sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Ilumatobacter sp.

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SIP_1000_bin_42_1


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 119

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: This sample represents a manually-refined metagenome-assembled genome recovered a metagenome from an Illumina paired-end read metagenome of a surface seawater sample collected around Herschel Island, Canada. The metagenome sample and related assembly can be found under ERS16475404, ERR12120025

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

unit: DD

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: Candidatus Methylopumilus planktonicus

characteristic: organism

text: Candidatus Methylopumilus planktonicus

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SIP_1000_bin_43_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 120

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured SAR86 cluster bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured SAR86 cluster bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SIP_1000_bin_47


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 121

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Burkholderiales bacterium

characteristic: organism

text: uncultured Burkholderiales bacterium

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SIP_1000_bin_49

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 122

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Loktanella sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Loktanella sp.

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SIP_1000_bin_50_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 123

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Burkholderiales bacterium

characteristic: organism

text: uncultured Burkholderiales bacterium

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SIP_1000_bin_56

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 124

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: Candidatus Nanopelagicaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Candidatus Nanopelagicaceae bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SIP_1000_bin_6


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 125

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: This sample represents a manually-refined metagenome-assembled genome recovered a metagenome from an Illumina paired-end read metagenome of a surface seawater sample collected around Herschel Island, Canada. The metagenome sample and related assembly can be found under ERS16475403, ERR12120026

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Flavobacteriaceae bacterium

characteristic: organism

text: uncultured Flavobacteriaceae bacterium

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLC_100_bin_12_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 126

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Opitutales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Opitutales bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLC_100_bin_13_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 127

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: Psychrobacter nivimaris

characteristic: organism

text: Psychrobacter nivimaris

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLC_100_bin_16

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 128

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Flavobacteriaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Flavobacteriaceae bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLC_100_bin_20


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 129

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Flavobacteriaceae bacterium

characteristic: organism

text: uncultured Flavobacteriaceae bacterium

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLC_100_bin_22_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 130

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Flavobacteriaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Flavobacteriaceae bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLC_100_bin_23_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 131

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured PS1 clade bacterium

characteristic: organism

text: uncultured PS1 clade bacterium

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLC_100_bin_25_1

characteristic: title


characteristic: ENA-CHECKLIST

text: MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 133

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Verrucomicrobiales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Verrucomicrobiales bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLC_100_bin_30_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 134

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: This sample represents a manually-refined metagenome-assembled genome recovered a metagenome from an Illumina paired-end read metagenome of a surface seawater sample collected around Herschel Island, Canada. The metagenome sample and related assembly can be found under ERS16475403, ERR12120026

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Alphaproteobacteria bacterium

characteristic: organism

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLC_100_bin_31_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 135

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Pseudomonadales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Pseudomonadales bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLC_100_bin_33_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 136

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured SAR86 cluster bacterium

characteristic: organism

text: uncultured SAR86 cluster bacterium

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLC_100_bin_38_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 137

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: Pseudoalteromonas nigrifaciens

characteristic: project name

characteristic: sample derived from

text: Pseudoalteromonas nigrifaciens

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLC_100_bin_40_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 138

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Burkholderiaceae bacterium

characteristic: organism

text: uncultured Burkholderiaceae bacterium

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLC_100_bin_41_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 139

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Methylophilaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Methylophilaceae bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLC_100_bin_42_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 140

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

characteristic: organism

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLC_100_bin_48_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 141

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

text: This sample represents a manually-refined metagenome-assembled genome recovered a metagenome from an Illumina paired-end read metagenome of a surface seawater sample collected around Herschel Island, Canada. The metagenome sample and related assembly can be found under ERS16475403, ERR12120026

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Pseudomonadales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Pseudomonadales bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLC_100_bin_49_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 142

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Halioglobus sp.

characteristic: organism

text: uncultured Halioglobus sp.

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLC_100_bin_50_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 143

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Pelagibacteraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Pelagibacteraceae bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLC_100_bin_52_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 144

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: Candidatus Nanopelagicaceae bacterium

characteristic: organism

text: Candidatus Nanopelagicaceae bacterium

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLC_100_bin_53_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 145

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Burkholderiaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Burkholderiaceae bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLC_100_bin_55


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 146

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Pseudomonadales bacterium

characteristic: organism

text: uncultured Pseudomonadales bacterium

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLC_100_bin_56_1

characteristic: title


characteristic: ENA-CHECKLIST

text: MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 147

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Pelagibacteraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Pelagibacteraceae bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLC_100_bin_57


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 148

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Flavobacterium sp.

characteristic: organism

text: uncultured Flavobacterium sp.

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLC_100_bin_63

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 149

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

text: This sample represents a manually-refined metagenome-assembled genome recovered a metagenome from an Illumina paired-end read metagenome of a surface seawater sample collected around Herschel Island, Canada. The metagenome sample and related assembly can be found under ERS16475402, ERR12120027

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: Candidatus Nanopelagicaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Candidatus Nanopelagicaceae bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLD_2000_bin_14


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 150

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: Methylotenera mobilis

characteristic: organism

text: Methylotenera mobilis

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLD_2000_bin_16

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 151

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: Candidatus Nanopelagicaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Candidatus Nanopelagicaceae bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLD_2000_bin_29_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 152

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Sphaerotilus sp.

characteristic: organism

text: uncultured Sphaerotilus sp.

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLD_2000_bin_38_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 153

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: Candidatus Nanopelagicales bacterium

characteristic: project name

characteristic: sample derived from

text: Candidatus Nanopelagicales bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLD_2000_bin_47_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 154

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Flavobacteriales bacterium

characteristic: organism

text: uncultured Flavobacteriales bacterium

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLD_2000_bin_48

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 155

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Flavobacteriales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Flavobacteriales bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLD_2000_bin_53_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 156

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Cyclobacteriaceae bacterium

characteristic: organism

text: uncultured Cyclobacteriaceae bacterium

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLD_2000_bin_66_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 157

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

text: This sample represents a manually-refined metagenome-assembled genome recovered a metagenome from an Illumina paired-end read metagenome of a surface seawater sample collected around Herschel Island, Canada. The metagenome sample and related assembly can be found under ERS16475402, ERR12120027

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: Candidatus Nanopelagicaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Candidatus Nanopelagicaceae bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLD_2000_bin_69_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 158

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Pseudomonas sp.

characteristic: organism

text: uncultured Pseudomonas sp.

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLD_2000_bin_7_2

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 159

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Methylophilaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Methylophilaceae bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLD_2000_bin_72_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 160

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Flavobacteriaceae bacterium

characteristic: organism

text: uncultured Flavobacteriaceae bacterium

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLD_2000_bin_8_1

characteristic: title


characteristic: ENA-CHECKLIST

text: MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 161

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

text: This sample represents a manually-refined metagenome-assembled genome recovered a metagenome from an Illumina paired-end read metagenome of a surface seawater sample collected around Herschel Island, Canada. The metagenome sample and related assembly can be found under ERS16475401, ERR12120028

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Rhodobacteraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Rhodobacteraceae bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLD_50_bin_13_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 162

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Polynucleobacter sp.

characteristic: organism

text: uncultured Polynucleobacter sp.

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLD_50_bin_14_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 163

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Burkholderiales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Burkholderiales bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLD_50_bin_17_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 164

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Flavobacteriales bacterium

characteristic: organism

text: uncultured Flavobacteriales bacterium

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLD_50_bin_21

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 165

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Methylophilaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Methylophilaceae bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLD_50_bin_22_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 166

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Porticoccus sp.

characteristic: organism

text: uncultured Porticoccus sp.

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLD_50_bin_23_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 167

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Luminiphilus sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Luminiphilus sp.

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLD_50_bin_25_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 168

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Acidimicrobiales bacterium

characteristic: organism

text: uncultured Acidimicrobiales bacterium

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLD_50_bin_34

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 169

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

text: This sample represents a manually-refined metagenome-assembled genome recovered a metagenome from an Illumina paired-end read metagenome of a surface seawater sample collected around Herschel Island, Canada. The metagenome sample and related assembly can be found under ERS16475401, ERR12120028

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Algoriphagus sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Algoriphagus sp.

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLD_50_bin_39_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 170

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Cyclobacteriaceae bacterium

characteristic: organism

text: uncultured Cyclobacteriaceae bacterium

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLD_50_bin_40_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 171

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Flavobacteriaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Flavobacteriaceae bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLD_50_bin_42_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 172

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Pseudomonadales bacterium

characteristic: organism

text: uncultured Pseudomonadales bacterium

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLD_50_bin_43_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 173

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured SAR86 cluster bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured SAR86 cluster bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLD_50_bin_45


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 174

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Cytophagales bacterium

characteristic: organism

text: uncultured Cytophagales bacterium

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLD_50_bin_46_1

characteristic: title


characteristic: ENA-CHECKLIST

text: MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 175

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Flavobacteriales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Flavobacteriales bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLD_50_bin_49


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 176

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Flavobacteriales bacterium

characteristic: organism

text: uncultured Flavobacteriales bacterium

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLD_50_bin_55_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 177

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

text: This sample represents a manually-refined metagenome-assembled genome recovered a metagenome from an Illumina paired-end read metagenome of a surface seawater sample collected around Herschel Island, Canada. The metagenome sample and related assembly can be found under ERS16475401, ERR12120028

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Flavobacteriales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Flavobacteriales bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLD_50_bin_57_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 178

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Limnohabitans sp.

characteristic: organism

text: uncultured Limnohabitans sp.

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLD_50_bin_58_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 179

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Flavobacterium sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Flavobacterium sp.

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLD_50_bin_6_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 180

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Luteolibacter sp.

characteristic: organism

text: uncultured Luteolibacter sp.

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLD_50_bin_62_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 181

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Pseudomonadales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Pseudomonadales bacterium

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLD_50_bin_65


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 182

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Rhodoferax sp.

characteristic: organism

text: uncultured Rhodoferax sp.

text: Illumina NextSeq2000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLD_50_bin_67_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 183

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Methylotenera sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Methylotenera sp.

text: Illumina NextSeq2000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER22_SLD_50_bin_69


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Flye v2.9.2

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 184

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: This sample represents a manually-refined metagenome-assembled genome recovered a metagenome from an PacBio HiFi read metagenome of a surface seawater sample collected around Herschel Island, Canada. The metagenome sample and related assembly can be found under ERS16475401, ERR12120030

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Psychrobacter sp.

characteristic: organism

text: uncultured Psychrobacter sp.

text: PacBio Sequel II

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER22_SLD_50_PacBio_bin_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

tag: Namespace:Natural Resources Institute Finland (Luke)

characteristic: collection date

text: cattle

characteristic: common name

text: 250ng starting material

characteristic: description

text: Finland

text: Bos taurus

text: Bos taurus


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Natural Resources Institute Finland (Luke)

characteristic: INSDC center name

text: public

text: cattle

text: 250ng starting material

text: Finland

text: Bos taurus

text: Bos taurus


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: cattle

text: 500ng starting material

text: Finland

text: Bos taurus

text: Bos taurus


text: public

characteristic: Submitter Id

text: common whitefish

text: Technical replicate

text: Finland

text: Coregonus lavaretus

text: Coregonus lavaretus


text: public

text: common whitefish

text: Family sample

text: Finland

text: Coregonus lavaretus

text: Coregonus lavaretus


text: public

text: common whitefish

text: Original sample

text: Finland

text: Coregonus lavaretus

text: Coregonus lavaretus


text: public

text: common whitefish

text: Random sample

text: Finland

text: Coregonus lavaretus

text: Coregonus lavaretus


text: public

text: common whitefish

text: Replicate

text: Finland

text: Coregonus lavaretus

text: Coregonus lavaretus


text: UCSDMI

text: public

text: tube

text: forcep

text: USA

characteristic: country

characteristic: death

text: prunefecal

text: TRUE

characteristic: dp

characteristic: elevation

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal distal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: fecal material

text: host-associated

text: not provided

text: no

characteristic: gc

text: no

text: USA:MI:East Lansing

text: USA

text: Mus musculus

characteristic: host scientific name

text: weeks

text: UBERON:feces

text: not applicable

text: UBERON:feces

text: UBERON:feces

text: mouse

text: not applicable

text: cm

text: adult

text: g

text: Michigan State University

characteristic: latitude

text: decimal degrees

characteristic: longitude

text: decimal degrees

text: mouse gut metagenome

text: Quinn Lab

text: TRUE

text: feces

text: feces

text: mouse gut metagenome

text: female

characteristic: sex

text: not provided

text: Prune Mouse Microbiome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

text: public

characteristic: collection date

text: tube

text: forcep

text: USA

text: prunefecal

characteristic: description

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal distal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: fecal material

text: host-associated

text: not provided

text: yes

text: yes

text: USA:MI:East Lansing

text: USA

characteristic: geographic location (country and/or sea)

text: Mus musculus

text: weeks

text: UBERON:feces

text: not applicable

text: UBERON:feces

text: UBERON:feces

text: mouse

text: not applicable

text: cm

text: adult

text: g

text: Michigan State University

text: decimal degrees

text: decimal degrees

text: mouse gut metagenome

characteristic: organism

text: Quinn Lab

text: TRUE

text: feces

text: feces

text: mouse gut metagenome

text: female

text: not provided

text: Prune Mouse Microbiome

characteristic: title


characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: tube

text: forcep

text: USA

characteristic: country

text: prunefecal

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal distal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: fecal material

text: host-associated

text: not provided

text: no

text: no

text: USA:MI:East Lansing

text: USA

text: Mus musculus

text: weeks

text: UBERON:feces

text: not applicable

text: UBERON:feces

text: UBERON:feces

text: mouse

text: not applicable

text: cm

text: adult

text: g

text: Michigan State University

text: decimal degrees

text: decimal degrees

text: mouse gut metagenome

text: Quinn Lab

text: TRUE

text: feces

text: feces

text: mouse gut metagenome

text: female

text: not provided

text: Prune Mouse Microbiome


text: UCSDMI

text: public

text: tube

text: forcep

text: USA

characteristic: death

text: prunefecal

text: TRUE

characteristic: dp

characteristic: elevation

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal distal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: fecal material

text: host-associated

text: not provided

text: yes

characteristic: gc

text: yes

text: USA:MI:East Lansing

text: USA

text: Mus musculus

characteristic: host scientific name

text: weeks

text: UBERON:feces

text: not applicable

text: UBERON:feces

text: UBERON:feces

text: mouse

text: not applicable

text: cm

text: adult

text: g

text: Michigan State University

characteristic: latitude

text: decimal degrees

characteristic: longitude

text: decimal degrees

text: mouse gut metagenome

text: Quinn Lab

text: TRUE

text: feces

text: feces

text: mouse gut metagenome

text: female

characteristic: sex

text: not provided

text: Prune Mouse Microbiome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

text: public

characteristic: collection date

text: tube

text: forcep

text: USA

text: prunefecal

characteristic: description

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal distal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: fecal material

text: host-associated

text: not provided

text: no

text: no

text: USA:MI:East Lansing

text: USA

characteristic: geographic location (country and/or sea)

text: Mus musculus

text: weeks

text: UBERON:feces

text: not applicable

text: UBERON:feces

text: UBERON:feces

text: mouse

text: not applicable

text: cm

text: adult

text: g

text: Michigan State University

text: decimal degrees

text: decimal degrees

text: mouse gut metagenome

characteristic: organism

text: Quinn Lab

text: TRUE

text: feces

text: feces

text: mouse gut metagenome

text: male

text: not provided

text: Prune Mouse Microbiome

characteristic: title


characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: tube

text: forcep

text: USA

characteristic: country

text: prunefecal

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal distal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: fecal material

text: host-associated

text: not provided

text: no

text: no

text: USA:MI:East Lansing

text: USA

text: Mus musculus

text: weeks

text: UBERON:feces

text: not applicable

text: UBERON:feces

text: UBERON:feces

text: mouse

text: not applicable

text: cm

text: adult

text: g

text: Michigan State University

text: decimal degrees

text: decimal degrees

text: mouse gut metagenome

text: Quinn Lab

text: TRUE

text: feces

text: feces

text: mouse gut metagenome

text: male

text: not provided

text: Prune Mouse Microbiome


text: UCSDMI

text: public

text: tube

text: forcep

text: USA

characteristic: death

text: prunefecal

text: TRUE

characteristic: dp

characteristic: elevation

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal distal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: fecal material

text: host-associated

text: not provided

text: yes

characteristic: gc

text: yes

text: USA:MI:East Lansing

text: USA

text: Mus musculus

characteristic: host scientific name

text: weeks

text: UBERON:feces

text: not applicable

text: UBERON:feces

text: UBERON:feces

text: mouse

text: not applicable

text: cm

text: adult

text: g

text: Michigan State University

characteristic: latitude

text: decimal degrees

characteristic: longitude

text: decimal degrees

text: mouse gut metagenome

text: Quinn Lab

text: TRUE

text: feces

text: feces

text: mouse gut metagenome

text: male

characteristic: sex

text: not provided

text: Prune Mouse Microbiome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UCSDMI

text: public

characteristic: collection date

text: tube

text: forcep

text: USA

text: prunefecal

characteristic: description

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal distal gut (non-saline)

text: urban biome

text: animal-associated habitat

text: fecal material

text: host-associated

text: not provided

text: yes

text: yes

text: USA:MI:East Lansing

text: USA

characteristic: geographic location (country and/or sea)

text: Mus musculus

text: weeks

text: UBERON:feces

text: not applicable

text: UBERON:feces

text: UBERON:feces

text: mouse

text: not applicable

text: cm

text: adult

text: g

text: Michigan State University

text: decimal degrees

text: decimal degrees

text: mouse gut metagenome

characteristic: organism

text: Quinn Lab

text: TRUE

text: feces

text: feces

text: mouse gut metagenome

text: male

text: not provided

text: Prune Mouse Microbiome

characteristic: title