text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: Victor Beltran

text: Australian Institute of Marine Science

text: dinoflagellate culture

characteristic: environmental medium

text: Australia

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Arlington Reef

characteristic: geographic location (region and locality)

characteristic: habitat

text: not applicable

characteristic: host life stage

text: Symbiodinium pilosum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Dehalococcoidia bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: Australia | Arlington Reef

characteristic: original collection location

text: ASG

characteristic: project name

characteristic: sample derived from

text: Dehalococcoidia bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: 68605754-1818-4a61-b8ac-b218061140c5-asg-MAGScoT_cleanbin_000045


status: PUBLIC

text: Yes

tag: attribute

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

tag: Namespace:Tree of Life Programme

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); MaxBin (version 2.7)

text: aquatic biome

characteristic: broad-scale environmental context

text: Victor Beltran

text: Australian Institute of Marine Science

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

characteristic: contamination score

text: dinoflagellate culture

text: Australia

characteristic: geographic location (country and/or sea)

text: not collected

unit: DD

text: not collected

text: Arlington Reef

text: not applicable

text: Symbiodinium pilosum

text: not applicable

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Dehalococcoidia bacterium

characteristic: organism

text: WHOLE ORGANISM

text: Australia | Arlington Reef

text: ASG

text: Dehalococcoidia bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

text: GTDB-TK (version 2.3.2); GTDB (release 214)

characteristic: taxonomic classification

text: taxonomic classification fully defined by topology

characteristic: taxonomic identity marker

text: 938a814a-a7a9-432c-9302-fddda961f002-asg-MAGScoT_cleanbin_000047

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: Victor Beltran

text: Australian Institute of Marine Science

text: dinoflagellate culture

characteristic: environmental medium

text: Australia

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Arlington Reef

characteristic: geographic location (region and locality)

characteristic: habitat

text: not applicable

characteristic: host life stage

text: Symbiodinium pilosum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Candidatus Paceibacterota bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: Australia | Arlington Reef

characteristic: original collection location

text: ASG

characteristic: project name

characteristic: sample derived from

text: Candidatus Paceibacterota bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: taxonomic novelty determined using RED

text: 943e5f1b-fc77-4159-9421-3b44cfae6817-asg-MAGScoT_cleanbin_000064


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

text: aquatic biome

characteristic: broad-scale environmental context

text: Victor Beltran

text: Australian Institute of Marine Science

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: dinoflagellate culture

text: Australia

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: Arlington Reef

text: not applicable

text: Symbiodinium pilosum

text: not applicable

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Maricaulis sp.

characteristic: organism

text: WHOLE ORGANISM

text: Australia | Arlington Reef

text: ASG

text: uncultured Maricaulis sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic classification defined by topology and ANI

characteristic: taxonomic identity marker

text: 2423cf34-cfa9-46bc-a14b-de9b3974d4cb-asg-MAGScoT_cleanbin_000011

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: Victor Beltran

text: Australian Institute of Marine Science

text: dinoflagellate culture

characteristic: environmental medium

text: Australia

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Arlington Reef

characteristic: geographic location (region and locality)

characteristic: habitat

text: not applicable

characteristic: host life stage

text: Symbiodinium pilosum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Marinicaulis sp.

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: Australia | Arlington Reef

characteristic: original collection location

text: ASG

characteristic: project name

characteristic: sample derived from

text: Marinicaulis sp.

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: 2f05e620-c47b-44e6-88d6-f49598d544e7-asg-MAGScoT_cleanbin_000013


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

text: aquatic biome

characteristic: broad-scale environmental context

text: Victor Beltran

text: Australian Institute of Marine Science

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: dinoflagellate culture

text: Australia

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: Arlington Reef

text: not applicable

text: Symbiodinium pilosum

text: not applicable

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Marinicaulis sp.

characteristic: organism

text: WHOLE ORGANISM

text: Australia | Arlington Reef

text: ASG

text: Marinicaulis sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 9fb8ac48-2042-4f68-9432-671af501892c-asg-MAGScoT_cleanbin_000022

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: Victor Beltran

text: Australian Institute of Marine Science

text: dinoflagellate culture

characteristic: environmental medium

text: Australia

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Arlington Reef

characteristic: geographic location (region and locality)

characteristic: habitat

text: not applicable

characteristic: host life stage

text: Symbiodinium pilosum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Marinicaulis sp.

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: Australia | Arlington Reef

characteristic: original collection location

text: ASG

characteristic: project name

characteristic: sample derived from

text: Marinicaulis sp.

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: 2a9880d4-a62a-4de7-b030-86ad4212eb4c-asg-MAGScoT_cleanbin_000026


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

text: aquatic biome

characteristic: broad-scale environmental context

text: Victor Beltran

text: Australian Institute of Marine Science

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: dinoflagellate culture

text: Australia

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: Arlington Reef

text: not applicable

text: Symbiodinium pilosum

text: not applicable

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Pyruvatibacter mobilis

characteristic: organism

text: WHOLE ORGANISM

text: Australia | Arlington Reef

text: ASG

text: Pyruvatibacter mobilis

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 06622f6d-969a-4084-b1ef-ffccfe7c5191-asg-MAGScoT_cleanbin_000003

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: Victor Beltran

text: Australian Institute of Marine Science

text: dinoflagellate culture

characteristic: environmental medium

text: Australia

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Arlington Reef

characteristic: geographic location (region and locality)

characteristic: habitat

text: not applicable

characteristic: host life stage

text: Symbiodinium pilosum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Parvibaculaceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: Australia | Arlington Reef

characteristic: original collection location

text: ASG

characteristic: project name

characteristic: sample derived from

text: Parvibaculaceae bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: 9451e3e7-cc4b-4a1e-a967-1caca904a2e9-asg-MAGScoT_cleanbin_000010


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

text: aquatic biome

characteristic: broad-scale environmental context

text: Victor Beltran

text: Australian Institute of Marine Science

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: dinoflagellate culture

text: Australia

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: Arlington Reef

text: not applicable

text: Symbiodinium pilosum

text: not applicable

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Boseongicola sp.

characteristic: organism

text: WHOLE ORGANISM

text: Australia | Arlington Reef

text: ASG

text: Boseongicola sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic novelty determined using RED

characteristic: taxonomic identity marker

text: 331e721b-9b2c-4eab-b4af-3abc5f152ba4-asg-MAGScoT_cleanbin_000009

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: Victor Beltran

text: Australian Institute of Marine Science

text: dinoflagellate culture

characteristic: environmental medium

text: Australia

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Arlington Reef

characteristic: geographic location (region and locality)

characteristic: habitat

text: not applicable

characteristic: host life stage

text: Symbiodinium pilosum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Paracoccaceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: Australia | Arlington Reef

characteristic: original collection location

text: ASG

characteristic: project name

characteristic: sample derived from

text: Paracoccaceae bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: ca5c29e5-2d04-4d11-8968-b8c22a4882d7-asg-MAGScoT_cleanbin_000008


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

text: aquatic biome

characteristic: broad-scale environmental context

text: Victor Beltran

text: Australian Institute of Marine Science

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: dinoflagellate culture

text: Australia

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: Arlington Reef

text: not applicable

text: Symbiodinium pilosum

text: not applicable

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Alphaproteobacteria bacterium

characteristic: organism

text: WHOLE ORGANISM

text: Australia | Arlington Reef

text: ASG

text: Alphaproteobacteria bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 26bd64c0-0f2d-4e52-a063-61ff611ccdf2-asg-MAGScoT_cleanbin_000007

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: Victor Beltran

text: Australian Institute of Marine Science

text: dinoflagellate culture

characteristic: environmental medium

text: Australia

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Arlington Reef

characteristic: geographic location (region and locality)

characteristic: habitat

text: not applicable

characteristic: host life stage

text: Symbiodinium pilosum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Spiribacter sp.

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: Australia | Arlington Reef

characteristic: original collection location

text: ASG

characteristic: project name

characteristic: sample derived from

text: Spiribacter sp.

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: e081874f-dcb2-4f7c-8211-6b2a15fb28c1-asg-MAGScoT_cleanbin_000053


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

text: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); MaxBin (version 2.7)

text: aquatic biome

characteristic: broad-scale environmental context

text: Victor Beltran

text: Australian Institute of Marine Science

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

text: checkM (version 1.2.1); checkM_DB (release 2015-01-16)

characteristic: completeness software

characteristic: contamination score

text: dinoflagellate culture

text: Australia

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: Arlington Reef

text: not applicable

text: Symbiodinium pilosum

text: not applicable

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Pseudomonadales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: Australia | Arlington Reef

text: ASG

text: Pseudomonadales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 7f94601b-d47d-4f97-bff7-5e062582eddd-asg-MAGScoT_cleanbin_000027

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: Victor Beltran

text: Australian Institute of Marine Science

text: dinoflagellate culture

characteristic: environmental medium

text: Australia

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Arlington Reef

characteristic: geographic location (region and locality)

characteristic: habitat

text: not applicable

characteristic: host life stage

text: Symbiodinium pilosum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Pseudomonadales bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: Australia | Arlington Reef

characteristic: original collection location

text: ASG

characteristic: project name

characteristic: sample derived from

text: Pseudomonadales bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: GTDB-TK (version 2.3.2); GTDB (release 214)

text: ANI

text: 926f935b-df41-466c-a5c1-31c2d9e2efa3-asg-MAGScoT_cleanbin_000002


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

text: aquatic biome

characteristic: broad-scale environmental context

text: Victor Beltran

text: Australian Institute of Marine Science

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: dinoflagellate culture

text: Australia

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: Arlington Reef

text: not applicable

text: Symbiodinium pilosum

text: not applicable

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Pseudomonadales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: Australia | Arlington Reef

text: ASG

text: Pseudomonadales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: ANI

characteristic: taxonomic identity marker

text: 53a0dcf1-8224-49ee-86b3-fa6dfe783702-asg-MAGScoT_cleanbin_000017

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: Victor Beltran

text: Australian Institute of Marine Science

text: dinoflagellate culture

characteristic: environmental medium

text: Australia

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Arlington Reef

characteristic: geographic location (region and locality)

characteristic: habitat

text: not applicable

characteristic: host life stage

text: Symbiodinium pilosum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Pseudomonadales bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: Australia | Arlington Reef

characteristic: original collection location

text: ASG

characteristic: project name

characteristic: sample derived from

text: Pseudomonadales bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: taxonomic classification defined by topology and ANI

text: 34150d0a-c55f-49b4-b82a-f2038f8a90b3-asg-MAGScoT_cleanbin_000015


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

text: aquatic biome

characteristic: broad-scale environmental context

text: Victor Beltran

text: Australian Institute of Marine Science

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: dinoflagellate culture

text: Australia

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: Arlington Reef

text: not applicable

text: Symbiodinium pilosum

text: not applicable

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Pseudohongiella sp.

characteristic: organism

text: WHOLE ORGANISM

text: Australia | Arlington Reef

text: ASG

text: uncultured Pseudohongiella sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 47d81073-cb36-4a01-b524-6c0a6fa7da1a-asg-MAGScoT_cleanbin_000012

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: Victor Beltran

text: Australian Institute of Marine Science

text: dinoflagellate culture

characteristic: environmental medium

text: Australia

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Arlington Reef

characteristic: geographic location (region and locality)

characteristic: habitat

text: not applicable

characteristic: host life stage

text: Symbiodinium pilosum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Gammaproteobacteria bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: Australia | Arlington Reef

characteristic: original collection location

text: ASG

characteristic: project name

characteristic: sample derived from

text: Gammaproteobacteria bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: aaa19712-8064-448f-a3ea-3039ebdaf282-asg-MAGScoT_cleanbin_000001


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

text: aquatic biome

characteristic: broad-scale environmental context

text: Victor Beltran

text: Australian Institute of Marine Science

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: dinoflagellate culture

text: Australia

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: Arlington Reef

text: not applicable

text: Symbiodinium pilosum

text: not applicable

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Gammaproteobacteria bacterium

characteristic: organism

text: WHOLE ORGANISM

text: Australia | Arlington Reef

text: ASG

text: Gammaproteobacteria bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic classification fully defined by topology

characteristic: taxonomic identity marker

text: a0eb60dd-e091-4559-a1f0-cfb53b82dda3-asg-MAGScoT_cleanbin_000021

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: Victor Beltran

text: Australian Institute of Marine Science

text: dinoflagellate culture

characteristic: environmental medium

text: Australia

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Arlington Reef

characteristic: geographic location (region and locality)

characteristic: habitat

text: not applicable

characteristic: host life stage

text: Symbiodinium pilosum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Gammaproteobacteria bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: Australia | Arlington Reef

characteristic: original collection location

text: ASG

characteristic: project name

characteristic: sample derived from

text: Gammaproteobacteria bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: 8e3bc6ce-b841-443b-bc1b-2004cf7c1c0e-asg-MAGScoT_cleanbin_000023


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

text: aquatic biome

characteristic: broad-scale environmental context

text: Victor Beltran

text: Australian Institute of Marine Science

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: dinoflagellate culture

text: Australia

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: Arlington Reef

text: not applicable

text: Symbiodinium pilosum

text: not applicable

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Gammaproteobacteria bacterium

characteristic: organism

text: WHOLE ORGANISM

text: Australia | Arlington Reef

text: ASG

text: Gammaproteobacteria bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

text: taxonomic novelty determined using RED

characteristic: taxonomic identity marker

text: 4feee3f2-ccb9-4819-93ba-1bc2e9d0c05e-asg-MAGScoT_cleanbin_000024

characteristic: title


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

text: Victor Beltran

text: Australian Institute of Marine Science

text: dinoflagellate culture

characteristic: environmental medium

text: Australia

text: not collected

characteristic: geographic location (latitude)

text: not collected

characteristic: geographic location (longitude)

text: Arlington Reef

characteristic: geographic location (region and locality)

characteristic: habitat

text: not applicable

characteristic: host life stage

text: Symbiodinium pilosum

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host taxid

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

characteristic: local environmental context

text: dinoflagellate metagenome

text: Leptospirales bacterium

text: WHOLE ORGANISM

characteristic: organism part

characteristic: original collection date

text: Australia | Arlington Reef

characteristic: original collection location

text: ASG

characteristic: project name

characteristic: sample derived from

text: Leptospirales bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.5)

text: c8770d22-4079-4951-b12b-76a941e02df6-asg-MAGScoT_cleanbin_000051


text: Yes

characteristic: 16S recovered

text: PROKKA (version 1.14.5)

characteristic: 16S recovery software

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Derby

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: metaMDBG

characteristic: assembly software

text: UNIVERSITY OF DERBY

characteristic: barcoding center

text: coverage; graph

characteristic: binning parameters

text: aquatic biome

characteristic: broad-scale environmental context

text: Victor Beltran

text: Australian Institute of Marine Science

characteristic: collecting institution

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: dinoflagellate culture

text: Australia

characteristic: geographic location (country and/or sea)

text: not collected

text: not collected

text: Arlington Reef

text: not applicable

text: Symbiodinium pilosum

text: not applicable

text: Carlos Alvarez Roa

text: Australian Insitute of Marine Science

text: metagenome-assembled genome

characteristic: investigation type

text: Dinoflagellate: Symbiodinium pilosum

text: marine biome

text: dinoflagellate metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Alkalispirochaeta sp.

characteristic: organism

text: WHOLE ORGANISM

text: Australia | Arlington Reef

text: ASG

text: Alkalispirochaeta sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.5)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 52462b18-c26b-428b-be18-86563201c1c0-asg-MAGScoT_cleanbin_000054

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not collected

text: cheek swab

text: Mauritius

characteristic: country

characteristic: description

text: TRUE

characteristic: elevation

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Mauritius

text: Homo sapiens

characteristic: host scientific name

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: not provided

text: kg

text: not provided

text: not provided

characteristic: latitude

text: Decimal degrees

text: Adult

characteristic: longitude

text: Decimal degrees

text: TRUE

characteristic: menopaused

text: human skin metagenome

text: not applicable

text: FALSE

text: skin

text: skin of cheek

text: human skin metagenome

text: female

characteristic: sex

text: not applicable

text: L'oreal study 2

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

characteristic: collection date

text: not collected

text: cheek swab

text: Mauritius

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Mauritius

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: not provided

text: kg

text: not provided

text: not provided

text: Decimal degrees

text: Adult

text: Decimal degrees

text: TRUE

text: human skin metagenome

characteristic: organism

text: not applicable

text: FALSE

text: skin

text: skin of cheek

text: human skin metagenome

text: female

text: not applicable

text: L'oreal study 2

characteristic: title

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: not collected

text: cheek swab

text: Singapore

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Singapore:Singapore

text: Singapore

text: Homo sapiens

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

text: Decimal degrees

text: Adult

text: Decimal degrees

text: Yes

text: human skin metagenome

text: not applicable

text: FALSE

text: skin

text: skin of cheek

text: human skin metagenome

text: female

text: not applicable

text: L'oreal study 3

text: not provided


text: UCSDMI

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: not collected

text: cheek swab

text: Singapore

characteristic: country

characteristic: description

text: TRUE

characteristic: elevation

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Singapore:Singapore

text: Singapore

text: Homo sapiens

characteristic: host scientific name

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

text: Decimal degrees

text: Adult

text: Decimal degrees

text: Yes

text: human skin metagenome

text: not applicable

text: FALSE

text: skin

text: skin of cheek

text: human skin metagenome

text: female

text: not applicable

text: L'oreal study 3

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: left

characteristic: cheek

text: not collected

text: cheek swab

text: Japan

text: 5001 left cheek

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

text: Homo sapiens

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

characteristic: latitude

text: Decimal degrees

text: Adult

characteristic: longitude

text: Decimal degrees

text: Yes

characteristic: menopaused

text: human skin metagenome

text: not applicable

text: FALSE

text: skin

text: run 2

characteristic: run

text: skin of cheek

text: human skin metagenome

text: female

characteristic: sex

text: not applicable

text: L'oreal study 5

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: left

characteristic: collection date

text: not collected

text: cheek swab

text: Japan

text: 5003 left cheek

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

text: Decimal degrees

text: Adult

text: Decimal degrees

text: Yes

text: human skin metagenome

characteristic: organism

text: not applicable

text: FALSE

text: skin

text: run 2

text: skin of cheek

text: human skin metagenome

text: female

text: not applicable

characteristic: title

text: L'oreal study 5

text: not provided


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: left

text: not collected

text: cheek swab

text: Japan

characteristic: country

text: 5005 left cheek

characteristic: description

text: TRUE

characteristic: elevation

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

text: Homo sapiens

characteristic: host scientific name

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

text: Decimal degrees

text: Adult

text: Decimal degrees

text: Yes

text: human skin metagenome

text: not applicable

text: FALSE

text: skin

text: run 3

text: skin of cheek

text: human skin metagenome

text: female

text: not applicable

text: L'oreal study 5

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: left

characteristic: cheek

text: not collected

text: cheek swab

text: Japan

text: 5007 left cheek

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

text: Homo sapiens

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

characteristic: latitude

text: Decimal degrees

text: Adult

characteristic: longitude

text: Decimal degrees

text: Yes

characteristic: menopaused

text: human skin metagenome

text: not applicable

text: FALSE

text: skin

text: run 3

characteristic: run

text: skin of cheek

text: human skin metagenome

text: female

characteristic: sex

text: not applicable

text: L'oreal study 5

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: left

characteristic: collection date

text: not collected

text: cheek swab

text: Japan

text: 5009 left cheek

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

text: Decimal degrees

text: Adult

text: Decimal degrees

text: Yes

text: human skin metagenome

characteristic: organism

text: not applicable

text: FALSE

text: skin

text: run 3

text: skin of cheek

text: human skin metagenome

text: female

text: not applicable

characteristic: title

text: L'oreal study 5

text: not provided


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: left

text: not collected

text: cheek swab

text: Japan

characteristic: country

text: 5010 left cheek

characteristic: description

text: TRUE

characteristic: elevation

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

text: Homo sapiens

characteristic: host scientific name

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

text: Decimal degrees

text: Adult

text: Decimal degrees

text: Yes

text: human skin metagenome

text: not applicable

text: FALSE

text: skin

text: run 3

text: skin of cheek

text: human skin metagenome

text: female

text: not applicable

text: L'oreal study 5

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: left

characteristic: cheek

text: not collected

text: cheek swab

text: Japan

text: 5013 left cheek

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

text: Homo sapiens

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

characteristic: latitude

text: Decimal degrees

text: Adult

characteristic: longitude

text: Decimal degrees

text: Yes

characteristic: menopaused

text: human skin metagenome

text: not applicable

text: FALSE

text: skin

text: run 1

characteristic: run

text: skin of cheek

text: human skin metagenome

text: female

characteristic: sex

text: not applicable

text: L'oreal study 5

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: left

characteristic: collection date

text: not collected

text: cheek swab

text: Japan

text: 5014 left cheek

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

text: Decimal degrees

text: Adult

text: Decimal degrees

text: Yes

text: human skin metagenome

characteristic: organism

text: not applicable

text: FALSE

text: skin

text: run 2

text: skin of cheek

text: human skin metagenome

text: female

text: not applicable

characteristic: title

text: L'oreal study 5

text: not provided


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: left

text: not collected

text: cheek swab

text: Japan

characteristic: country

text: 5016 left cheek

characteristic: description

text: TRUE

characteristic: elevation

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

text: Homo sapiens

characteristic: host scientific name

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

text: Decimal degrees

text: Adult

text: Decimal degrees

text: Yes

text: human skin metagenome

text: not applicable

text: FALSE

text: skin

text: run 1

text: skin of cheek

text: human skin metagenome

text: female

text: not applicable

text: L'oreal study 5

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: left

characteristic: cheek

text: not collected

text: cheek swab

text: Japan

text: 5017 left cheek

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

text: Homo sapiens

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

characteristic: latitude

text: Decimal degrees

text: Adult

characteristic: longitude

text: Decimal degrees

text: Yes

characteristic: menopaused

text: human skin metagenome

text: not applicable

text: FALSE

text: skin

text: run 3

characteristic: run

text: skin of cheek

text: human skin metagenome

text: female

characteristic: sex

text: not applicable

text: L'oreal study 5

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: left

characteristic: collection date

text: not collected

text: cheek swab

text: Japan

text: 5018 left cheek

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

text: Decimal degrees

text: Adult

text: Decimal degrees

text: Yes

text: human skin metagenome

characteristic: organism

text: not applicable

text: FALSE

text: skin

text: run 2

text: skin of cheek

text: human skin metagenome

text: female

text: not applicable

text: L'oreal study 5

characteristic: title

text: not provided


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: left

text: not collected

text: cheek swab

text: Japan

characteristic: country

text: 5020 left cheek

characteristic: description

text: TRUE

characteristic: elevation

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

text: Homo sapiens

characteristic: host scientific name

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

text: Decimal degrees

text: Adult

text: Decimal degrees

text: Yes

text: human skin metagenome

text: not applicable

text: FALSE

text: skin

text: run 1

text: skin of cheek

text: human skin metagenome

text: female

text: not applicable

text: L'oreal study 5

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: left

characteristic: cheek

text: not collected

text: cheek swab

text: Japan

text: 5021 left cheek

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

text: Homo sapiens

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

characteristic: latitude

text: Decimal degrees

text: Adult

characteristic: longitude

text: Decimal degrees

text: Yes

characteristic: menopaused

text: human skin metagenome

text: not applicable

text: FALSE

text: skin

text: run 1

characteristic: run

text: skin of cheek

text: human skin metagenome

text: female

characteristic: sex

text: not applicable

text: L'oreal study 5

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: left

characteristic: collection date

text: not collected

text: cheek swab

text: Japan

text: 5023 left cheek

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

text: Decimal degrees

text: Adult

text: Decimal degrees

text: Yes

text: human skin metagenome

characteristic: organism

text: not applicable

text: FALSE

text: skin

text: run 2

text: skin of cheek

text: human skin metagenome

text: female

text: not applicable

characteristic: title

text: L'oreal study 5

text: not provided


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: left

text: not collected

text: cheek swab

text: Japan

characteristic: country

text: 5024 left cheek

characteristic: description

text: TRUE

characteristic: elevation

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

text: Homo sapiens

characteristic: host scientific name

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

text: Decimal degrees

text: Adult

text: Decimal degrees

text: Yes

text: human skin metagenome

text: not applicable

text: FALSE

text: skin

text: run 3

text: skin of cheek

text: human skin metagenome

text: female

text: not applicable

text: L'oreal study 5

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: left

characteristic: cheek

text: not collected

text: cheek swab

text: Japan

text: 5025 left cheek

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

text: Homo sapiens

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

characteristic: latitude

text: Decimal degrees

text: Adult

characteristic: longitude

text: Decimal degrees

text: Yes

characteristic: menopaused

text: human skin metagenome

text: not applicable

text: FALSE

text: skin

text: run 2

characteristic: run

text: skin of cheek

text: human skin metagenome

text: female

characteristic: sex

text: not applicable

text: L'oreal study 5

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: left

characteristic: collection date

text: not collected

text: cheek swab

text: Japan

text: 5027 left cheek

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

text: Decimal degrees

text: Adult

text: Decimal degrees

text: Yes

text: human skin metagenome

characteristic: organism

text: not applicable

text: FALSE

text: skin

text: run 1

text: skin of cheek

text: human skin metagenome

text: female

text: not applicable

text: L'oreal study 5

characteristic: title

text: not provided


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: left

text: not collected

text: cheek swab

text: Japan

characteristic: country

text: 5028 left cheek

characteristic: description

text: TRUE

characteristic: elevation

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

text: Homo sapiens

characteristic: host scientific name

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

text: Decimal degrees

text: Adult

text: Decimal degrees

text: Yes

text: human skin metagenome

text: not applicable

text: FALSE

text: skin

text: run 2

text: skin of cheek

text: human skin metagenome

text: female

text: not applicable

text: L'oreal study 5

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: left

characteristic: cheek

text: not collected

text: cheek swab

text: Japan

text: 5033 left cheek

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

text: Homo sapiens

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

characteristic: latitude

text: Decimal degrees

text: Adult

characteristic: longitude

text: Decimal degrees

text: Yes

characteristic: menopaused

text: human skin metagenome

text: not applicable

text: FALSE

text: skin

text: run 1

characteristic: run

text: skin of cheek

text: human skin metagenome

text: female

characteristic: sex

text: not applicable

text: L'oreal study 5

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: left

characteristic: collection date

text: not collected

text: cheek swab

text: Japan

text: 5034 left cheek

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

text: Decimal degrees

text: Adult

text: Decimal degrees

text: Yes

text: human skin metagenome

characteristic: organism

text: not applicable

text: FALSE

text: skin

text: run 3

text: skin of cheek

text: human skin metagenome

text: female

text: not applicable

characteristic: title

text: L'oreal study 5

text: not provided


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: left

text: not collected

text: cheek swab

text: Japan

characteristic: country

text: 5035 left cheek

characteristic: description

text: TRUE

characteristic: elevation

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

text: Homo sapiens

characteristic: host scientific name

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

text: Decimal degrees

text: Adult

text: Decimal degrees

text: Yes

text: human skin metagenome

text: not applicable

text: FALSE

text: skin

text: run 1

text: skin of cheek

text: human skin metagenome

text: female

text: not applicable

text: L'oreal study 5

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: left

characteristic: cheek

text: not collected

text: cheek swab

text: Japan

text: 5036 left cheek

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

text: Homo sapiens

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

characteristic: latitude

text: Decimal degrees

text: Adult

characteristic: longitude

text: Decimal degrees

text: Yes

characteristic: menopaused

text: human skin metagenome

text: not applicable

text: FALSE

text: skin

text: run 3

characteristic: run

text: skin of cheek

text: human skin metagenome

text: female

characteristic: sex

text: not applicable

text: L'oreal study 5

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: left

characteristic: collection date

text: not collected

text: cheek swab

text: Japan

text: 5037 left cheek

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

text: Decimal degrees

text: Adult

text: Decimal degrees

text: Yes

text: human skin metagenome

characteristic: organism

text: not applicable

text: FALSE

text: skin

text: run 2

text: skin of cheek

text: human skin metagenome

text: female

text: not applicable

characteristic: title

text: L'oreal study 5

text: not provided


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: left

text: not collected

text: cheek swab

text: Japan

characteristic: country

text: 5038 left cheek

characteristic: description

text: TRUE

characteristic: elevation

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

text: Homo sapiens

characteristic: host scientific name

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

text: Decimal degrees

text: Adult

text: Decimal degrees

text: Yes

text: human skin metagenome

text: not applicable

text: FALSE

text: skin

text: run 3

text: skin of cheek

text: human skin metagenome

text: female

text: not applicable

text: L'oreal study 5

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: left

characteristic: cheek

text: not collected

text: cheek swab

text: Japan

text: 5039 left cheek

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

text: Homo sapiens

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

characteristic: latitude

text: Decimal degrees

text: Adult

characteristic: longitude

text: Decimal degrees

text: Yes

characteristic: menopaused

text: human skin metagenome

text: not applicable

text: FALSE

text: skin

text: run 1

characteristic: run

text: skin of cheek

text: human skin metagenome

text: female

characteristic: sex

text: not applicable

text: L'oreal study 5

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: left

characteristic: collection date

text: not collected

text: cheek swab

text: Japan

text: 5042 left cheek

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

text: Decimal degrees

text: Adult

text: Decimal degrees

text: Yes

text: human skin metagenome

characteristic: organism

text: not applicable

text: FALSE

text: skin

text: run 3

text: skin of cheek

text: human skin metagenome

text: female

text: not applicable

characteristic: title

text: L'oreal study 5

text: not provided


text: UCSDMI

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: left

text: not collected

text: cheek swab

text: Japan

characteristic: country

text: 5044 left cheek

characteristic: description

text: TRUE

characteristic: elevation

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

text: Homo sapiens

characteristic: host scientific name

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

text: Decimal degrees

text: Adult

text: Decimal degrees

text: Yes

text: human skin metagenome

text: not applicable

text: FALSE

text: skin

text: run 1

text: skin of cheek

text: human skin metagenome

text: female

text: not applicable

text: L'oreal study 5

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

text: public

text: left

characteristic: cheek

text: not collected

text: cheek swab

text: Japan

text: 5045 left cheek

text: TRUE

text: meters

text: Host-associated

text: Host-associated (non-saline)

text: Animal (non-saline)

text: Animal surface (non-saline)

text: urban biome

text: human-associated habitat

text: sebum material

text: human-skin

text: Japan:Tokyo

text: Japan

text: Homo sapiens

text: years

text: UBERON:skin

text: UBERON:sebum

text: UBERON:skin of cheek

text: human

text: not provided

text: cm

text: adult

text: not provided

text: kg

text: not provided

text: not provided

characteristic: latitude

text: Decimal degrees

text: Adult

characteristic: longitude

text: Decimal degrees

text: Yes

characteristic: menopaused

text: human skin metagenome

text: not applicable

text: FALSE

text: skin

text: run 1

characteristic: run

text: skin of cheek

text: human skin metagenome

text: female

characteristic: sex

text: not applicable

text: L'oreal study 5

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: HY YES

characteristic: INSDC center name

characteristic: INSDC first public

text: public

tag: Namespace:HY YES

characteristic: collection date

text: Isolated from a rectal screening specimen of a horse.

text: Finland

characteristic: geographic location (country and/or sea)

text: not provided

characteristic: host health state

text: Equus caballus

characteristic: isolate

text: Rectum

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: Escherichia coli ST1079

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: HY YES

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: description

text: Finland

text: not provided

text: Equus caballus

characteristic: host scientific name

text: Rectum

text: Escherichia coli

text: Escherichia coli

text: Escherichia coli ST1245


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBP Norway

text: public

tag: Namespace:EBP Norway

text: ELIXIR-Norway

characteristic: broker name

text: A. Lovisa S. Gustafsson

text: Natural History Museum, University of Oslo

characteristic: collecting institution

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: U.S.A., Alaska, Seward Peninsula: Wooly Lagoon (on the stony coast of the lagoon)

characteristic: geographic location (region and locality)

text: Sea coast (envo:00000303)

characteristic: habitat

text: Adult

characteristic: lifestage

text: Cochlearia groenlandica

text: Leaf

characteristic: organism part

text: Cochlearia groenlandica (Danish scurvygrass) genome assembly, ddCocGroe1

characteristic: project name

text: Cochlearia groenlandica

text: Hermaphrodite

characteristic: sex

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: NORWEGIAN UNIVERSITY OF LIFE SCIENCES

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:NORWEGIAN UNIVERSITY OF LIFE SCIENCES

characteristic: altitude

text: Siw Turid Killengreen (Universitet i Tromsø)

characteristic: collection date

text: Pooled data from Northern Norway (2F-Adult,6M-Adult,3F-Juvenile,1M-Juvenile)

text: Norway

characteristic: geographic location (country and/or sea)

text: Ifjordfjellet Finnmark

text: Alexandromys oeconomus

characteristic: organism

text: Alexandromys oeconomus

text: Muscle

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NORWEGIAN UNIVERSITY OF LIFE SCIENCES

text: public

characteristic: Submitter Id

text: Karol Zub (Mammalian Research Institute PAS)

text: Pooled data from Eastern Poland (4F-Adult,4M-Adult,4F-Juvenile,1M-Juvenile)

characteristic: description

text: Poland

text: Białowieża

characteristic: geographic location (region and locality)

text: Alexandromys oeconomus

text: Alexandromys oeconomus

text: Tail tip


characteristic: ENA-CHECKLIST

text: The Milner Therapeutics Institute

text: public

tag: Namespace:The Milner Therapeutics Institute

text: human

characteristic: common name

text: total RNA from human MOLM-13 treated with vehicle (DMSO) rep A

text: United Kingdom

text: Homo sapiens

text: Homo sapiens

text: Input WT A


characteristic: ENA-FIRST-PUBLIC

text: The Milner Therapeutics Institute

characteristic: INSDC center name

text: public

text: human

text: total RNA from human MOLM-13 treated with vehicle (DMSO) rep B

text: United Kingdom

text: Homo sapiens

text: Homo sapiens

text: Input WT B


text: The Milner Therapeutics Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: human

text: total RNA from human MOLM-13 treated with 1 �M STM2457 for 48h replicate A

text: United Kingdom

text: Homo sapiens

text: Homo sapiens

text: Input STM2457 A


text: The Milner Therapeutics Institute

text: public

characteristic: INSDC status

characteristic: SRA accession

text: human

text: total RNA from human MOLM-13 treated with 1 �M STM2457 for 48h replicate B

text: United Kingdom

text: Homo sapiens

text: Homo sapiens

text: Input STM2457 B


text: University of Strasbourg

text: public

tag: Namespace:University of Strasbourg

unit: week

characteristic: age

text: ArrayExpress

characteristic: broker name

text: CD4-positive, alpha-beta T cell

text: not collected

characteristic: collection date

text: house mouse

text: Protocols: Mouse splenocytes from STING GOF mice (n=5) and WT littermate controls (n=5) were stained as described above with anti-CD3e FITC (clone 145–2 C11, BD Biosciences), anti-CD4 AF700 (RM4-5, BD Pharmingen), anti-CD8a PE (53-6 .7, BD Pharmingen) and DAPI (1 μM/mL, Sigma) before positive sorting of living CD3+CD4+ or CD3+CD8+ T cells using a BD FACSAria™ Fusion flow cytometer (IGBMC Flow Cytometry Facility, Strasbourg, France). Isolated cells were at least 95% pure. Total RNA was extracted using RNeasy® Plus Micro Kit (Qiagen) according to the manufacturer’s instructions. Libraries were prepared from 10 ng RNA using SMARTer Stranded Total RNA-Seq Kit, Pico Input Mammalian (Takara) following the manufacturer’s instructions. Briefly, random primers were used for first-strand synthesis, and ribosomal cDNA was cleaved by ZapR V.2 in the presence of mammalian R-probes V.2.

text: adult

characteristic: developmental stage

text: SCID

characteristic: disease

characteristic: genotype

text: not collected

characteristic: individual

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: blood

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Strasbourg

text: public

characteristic: Submitter Id

text: ArrayExpress

text: CD4-positive, alpha-beta T cell

text: not collected

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: normal

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: blood

text: Mus musculus

text: male

characteristic: title


text: University of Strasbourg

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: age

text: ArrayExpress

characteristic: broker name

text: CD8-positive, alpha-beta T cell

text: not collected

characteristic: collection date

text: house mouse

text: adult

characteristic: developmental stage

text: SCID

characteristic: disease

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: blood

text: Mus musculus

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Strasbourg

text: public

text: ArrayExpress

text: CD8-positive, alpha-beta T cell

text: not collected

text: house mouse

text: adult

text: normal

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: individual

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: blood

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain


text: Queen Mary University of London

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: QUEEN MARY UNIVERSITY OF LONDON

characteristic: barcoding center

text: aquatic biome

characteristic: broad-scale environmental context

text: Kate Mortimer

text: Department of Natural Sciences, Amgueddfa Cymru - National Museum Wales, Cardiff, United Kingdom

characteristic: collecting institution

unit: m

characteristic: depth

text: adult annelid tissue

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Plymouth|Cawsands Bay

characteristic: geographic location (region and locality)

text: low water (0.5m) in muddy sand sediments

characteristic: habitat

text: adult

characteristic: host life stage

text: Magelona johnstoni

characteristic: host scientific name

text: not provided

characteristic: host sex

characteristic: host taxid

text: Kate Mortimer

text: marine mud

characteristic: local environmental context

text: annelid metagenome

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: asymbiotic, outgroup taxon

characteristic: relationship

text: collected by hand (forceps and water bottle) after digging to approximately 15 cm

characteristic: sample collection device or method

characteristic: sample derived from

text: annelid metagenome

text: c57f1d0f-8609-4581-9e58-2945bf3e7b7d-asg-metagenome

characteristic: title

characteristic: tolid