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text: not provided

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text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


characteristic: ENA-FIRST-PUBLIC

text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:850-44188

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:850-44189

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


characteristic: INSDC first public

text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:850-44190

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


characteristic: INSDC last update

text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:850-44191

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:850-44192

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:851-44193

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:851-44194

characteristic: Submitter Id

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:851-44195

text: not provided

text: Clinical sample isolation

characteristic: description

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


characteristic: ENA-LAST-UPDATE

text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:851-44196

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


characteristic: External Id

text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:851-44197

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:851-44198

text: not provided

characteristic: collection date

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:851-44199

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

characteristic: geographic location (country and/or sea)

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


text: King Abdullah University of Science and Technology

text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:851-44200

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

characteristic: organism

text: Staphylococcus aureus


text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:851-44201

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus

characteristic: title


text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:851-44202

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

characteristic: host health state

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:851-44203

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

characteristic: host scientific name

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


characteristic: ENA-CHECKLIST

text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:851-44204

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


characteristic: ENA-FIRST-PUBLIC

text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:851-44205

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:851-44206

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


characteristic: INSDC first public

text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:851-44207

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


characteristic: INSDC last update

text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:851-44208

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:851-44209

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:851-44210

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:851-44211

characteristic: Submitter Id

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:852-44212

text: not provided

text: Clinical sample isolation

characteristic: description

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


characteristic: ENA-LAST-UPDATE

text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:852-44213

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


characteristic: External Id

text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:852-44214

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:852-44215

text: not provided

characteristic: collection date

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


text: King Abdullah University of Science and Technology

text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:852-44216

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

characteristic: geographic location (country and/or sea)

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:852-44217

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

characteristic: organism

text: Staphylococcus aureus


text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:852-44218

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus

characteristic: title


text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:852-44219

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

characteristic: host health state

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:852-44220

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

characteristic: host scientific name

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


characteristic: ENA-CHECKLIST

text: public

text: ena-SAMPLE-TAB-25-01-2024-11:01:09:852-44221

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


characteristic: ENA-FIRST-PUBLIC

text: PYH

text: public

text: In vitro community

text: not applicable

text: synthetic metagenome

text: synthetic metagenome


text: UMCG

characteristic: INSDC center name

text: public

text: not provided

text: Netherlands

text: human

characteristic: host

text: Yes

text: nose/throat swab

text: Human respirovirus 3

text: Human respirovirus 3


text: SC

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: SC

characteristic: broker name

text: Rosalind Franklin Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Samples prepared at Rosalind Franklin Laboratory by Donald Fraser, Suki Lee, Rob Howes, The Rosalind Franklin Laboratory and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: SC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SC

text: Rosalind Franklin Laboratory

characteristic: collection date

text: not provided

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

text: Human

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:CIIMAR - Interdisciplinary Centre of Marine and Environmental Research

text: marine biome

characteristic: broad-scale environmental context

unit: year-month-day

unit: m

characteristic: depth

text: Amplicon sequencing of the V4-V5 16S rRNA gene from seawater collected in the station HG-I of Kongsfjorden, at 5m depth

text: sea water

characteristic: environmental medium

text: Arctic Ocean

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: oceanic epipelagic zone biome

characteristic: local environmental context

text: marine metagenome

characteristic: project name

text: marine metagenome


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: CIIMAR - Interdisciplinary Centre of Marine and Environmental Research

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: marine biome

characteristic: collection date

text: Amplicon sequencing of the V4-V5 16S rRNA gene from seawater collected in the station HG-I of Kongsfjorden, at 25m depth

characteristic: description

text: sea water

text: Arctic Ocean

text: oceanic epipelagic zone biome

text: marine metagenome

text: marine metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

text: public

text: marine biome

text: Amplicon sequencing of the V4-V5 16S rRNA gene from seawater collected in the station HG-I of Kongsfjorden, at 1220m depth

text: sea water

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

text: oceanic bathypelagic zone biome

text: marine metagenome

characteristic: organism

text: marine metagenome

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: marine biome

characteristic: broad-scale environmental context

characteristic: depth

text: Amplicon sequencing of the V4-V5 16S rRNA gene from seawater collected in the station KB7 of Kongsfjorden, at 1m depth

text: sea water

characteristic: environmental medium

text: Arctic Ocean

characteristic: geographic location (latitude)

text: oceanic epipelagic zone biome

text: marine metagenome

text: marine metagenome


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

text: marine biome

text: Amplicon sequencingthe V4-V5 16S rRNA gene from seawater collected in the station KB7 Kongsfjorden, at 5m depth

text: sea water

text: Arctic Ocean

characteristic: geographic location (longitude)

text: oceanic epipelagic zone biome

characteristic: local environmental context

text: marine metagenome

characteristic: project name

text: marine metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine biome

characteristic: collection date

text: Amplicon sequencingthe V4-V5 16S rRNA gene from seawater collected in the station KB7 Kongsfjorden, at 61m depth

characteristic: description

text: sea water

text: Arctic Ocean

text: oceanic epipelagic zone biome

text: marine metagenome

text: marine metagenome


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: marine biome

text: Amplicon sequencingthe V4-V5 16S rRNA gene from seawater collected in the station KB5 Kongsfjorden, at 1m depth

text: sea water

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

text: oceanic epipelagic zone biome

text: marine metagenome

characteristic: organism

text: marine metagenome

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: marine biome

characteristic: broad-scale environmental context

characteristic: depth

text: Amplicon sequencingthe V4-V5 16S rRNA gene from seawater collected in the station KB5 Kongsfjorden, at 12m depth

text: sea water

characteristic: environmental medium

text: Arctic Ocean

characteristic: geographic location (latitude)

text: oceanic epipelagic zone biome

text: marine metagenome

text: marine metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: INSDC status

text: marine biome

text: Amplicon sequencingthe V4-V5 16S rRNA gene from seawater collected in the station KB5 Kongsfjorden, at 65m depth

text: sea water

text: Arctic Ocean

characteristic: geographic location (longitude)

text: oceanic epipelagic zone biome

characteristic: local environmental context

text: marine metagenome

characteristic: project name

text: marine metagenome


characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine biome

characteristic: collection date

text: Amplicon sequencingthe V4-V5 16S rRNA gene from seawater collected in the station KB2 Kongsfjorden, at 1m depth

characteristic: description

text: sea water

text: Arctic Ocean

text: oceanic epipelagic zone biome

text: marine metagenome

text: marine metagenome


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC last update

text: public

text: marine biome

text: Amplicon sequencingthe V4-V5 16S rRNA gene from seawater collected in the station KB2 Kongsfjorden, at 13m depth

text: sea water

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

text: oceanic epipelagic zone biome

text: marine metagenome

characteristic: organism

text: marine metagenome

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: marine biome

characteristic: broad-scale environmental context

characteristic: depth

text: Amplicon sequencingthe V4-V5 16S rRNA gene from seawater collected in the station KB2 Kongsfjorden, at 290m depth

text: sea water

characteristic: environmental medium

text: Arctic Ocean

characteristic: geographic location (latitude)

text: oceanic mesopelagic zone biome

text: marine metagenome

text: marine metagenome


characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

text: marine biome

text: Amplicon sequencingthe V4-V5 16S rRNA gene from seawater collected in the station KB1 Kongsfjorden, at 1m depth

text: sea water

text: Arctic Ocean

characteristic: geographic location (longitude)

text: oceanic epipelagic zone biome

characteristic: local environmental context

text: marine metagenome

characteristic: project name

text: marine metagenome


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine biome

characteristic: collection date

text: Amplicon sequencingthe V4-V5 16S rRNA gene from seawater collected in the station KB1 Kongsfjorden, at 14m depth

characteristic: description

text: sea water

text: Arctic Ocean

text: oceanic epipelagic zone biome

text: marine metagenome

text: marine metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

text: marine biome

text: Amplicon sequencingthe V4-V5 16S rRNA gene from seawater collected in the station KB1 Kongsfjorden, at 340m depth

text: sea water

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

text: oceanic mesopelagic zone biome

text: marine metagenome

characteristic: organism

text: marine metagenome

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: marine biome

characteristic: broad-scale environmental context

characteristic: depth

text: Amplicon sequencingthe V4-V5 16S rRNA gene from seawater collected in the station V10 Kongsfjorden, at 5m depth

text: sea water

characteristic: environmental medium

text: Arctic Ocean

characteristic: geographic location (latitude)

text: oceanic epipelagic zone biome

text: marine metagenome

text: marine metagenome


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

text: marine biome

text: Amplicon sequencingthe V4-V5 16S rRNA gene from seawater collected in the station V10 Kongsfjorden, at 25m depth

text: sea water

text: Arctic Ocean

characteristic: geographic location (longitude)

text: oceanic epipelagic zone biome

characteristic: local environmental context

text: marine metagenome

characteristic: project name

text: marine metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: CIIMAR - Interdisciplinary Centre of Marine and Environmental Research

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: marine biome

characteristic: collection date

text: Amplicon sequencingthe V4-V5 16S rRNA gene from seawater collected in the station V10 Kongsfjorden, at 260m depth

characteristic: description

text: sea water

text: Arctic Ocean

text: oceanic mesopelagic zone biome

text: marine metagenome

text: marine metagenome


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: marine biome

text: Amplicon sequencingthe V4-V5 16S rRNA gene from seawater collected in the station KH Kongsfjorden, at 5m depth

text: sea water

text: Arctic Ocean

characteristic: geographic location (country and/or sea)

text: oceanic epipelagic zone biome

text: marine metagenome

characteristic: organism

text: marine metagenome

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: marine biome

characteristic: broad-scale environmental context

characteristic: depth

text: Amplicon sequencingthe V4-V5 16S rRNA gene from seawater collected in the station KH Kongsfjorden, at 25m depth

text: sea water

characteristic: environmental medium

text: Arctic Ocean

characteristic: geographic location (latitude)

text: oceanic epipelagic zone biome

text: marine metagenome

text: marine metagenome


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: INSDC status

text: marine biome

text: Amplicon sequencingthe V4-V5 16S rRNA gene from seawater collected in the station KH Kongsfjorden, at 1300m depth

text: sea water

text: Arctic Ocean

characteristic: geographic location (longitude)

text: oceanic bathypelagic zone biome

characteristic: local environmental context

text: marine metagenome

characteristic: project name

text: marine metagenome


text: Human Technopole

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

tag: Namespace:Human Technopole

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: induced pluripotent stem cell

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: Protocols: H9 ES commercial line from WiCell Cat#WA09; RRID:CVCL_9773 were used. Mutation where made by CRISPR/Cas9 and were directly taken from patients. Enzymatic dissociation of organoids into single cells as described in doi: 10.1073/pnas.1520760112 Chromium Next GEM Single Cell 3′ GEM, Library & Gel Bead Kit v2 Chromium Next GEM Single Cell 3′ GEM, Library & Gel Bead Kit v2

characteristic: description

text: normal

characteristic: disease

text: CTL

characteristic: genetic modification

text: not collected

text: organoid culture

characteristic: growth condition

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: brain

characteristic: organism part

text: Homo sapiens

text: female

characteristic: sex

unit: day

characteristic: time


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Human Technopole

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: induced pluripotent stem cell

text: not collected

text: human

text: normal

text: not collected

characteristic: geographic location (country and/or sea)

text: organoid culture

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: brain

text: Homo sapiens

text: female

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

tag: Namespace:MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 10

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

text: This sample represents a manually-refined metagenome-assembled genome recovered a metagenome from an Illumina paired-end read metagenome of a surface seawater sample collected around Herschel Island, Canada. The metagenome sample and related assembly can be found under ERS16475400, ERR12120021

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Pseudomonadales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Pseudomonadales bacterium

text: Illumina HiSeq3000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER19_SIP_2000_bin_10_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 11

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Pseudomonadales bacterium

characteristic: organism

text: uncultured Pseudomonadales bacterium

text: Illumina HiSeq3000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER19_SIP_2000_bin_23

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 12

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Pseudoalteromonas sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Pseudoalteromonas sp.

text: Illumina HiSeq3000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER19_SIP_2000_bin_25_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 13

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Pseudomonadales bacterium

characteristic: organism

text: uncultured Pseudomonadales bacterium

text: Illumina HiSeq3000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER19_SIP_2000_bin_27_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 14

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Pseudomonadales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Pseudomonadales bacterium

text: Illumina HiSeq3000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER19_SIP_2000_bin_38_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 15

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Pseudomonadales bacterium

characteristic: organism

text: uncultured Pseudomonadales bacterium

text: Illumina HiSeq3000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER19_SIP_2000_bin_43_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 16

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Rhodobacteraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Rhodobacteraceae bacterium

text: Illumina HiSeq3000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER19_SIP_2000_bin_45_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 17

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Pseudomonadales bacterium

characteristic: organism

text: uncultured Pseudomonadales bacterium

text: Illumina HiSeq3000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER19_SIP_2000_bin_47_1

characteristic: title


characteristic: ENA-CHECKLIST

text: MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 18

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

text: This sample represents a manually-refined metagenome-assembled genome recovered a metagenome from an Illumina paired-end read metagenome of a surface seawater sample collected around Herschel Island, Canada. The metagenome sample and related assembly can be found under ERS16475400, ERR12120021

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Pseudomonadales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Pseudomonadales bacterium

text: Illumina HiSeq3000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER19_SIP_2000_bin_52_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 19

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Methylophilaceae bacterium

characteristic: organism

text: uncultured Methylophilaceae bacterium

text: Illumina HiSeq3000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER19_SIP_2000_bin_54_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 20

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Amylibacter sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Amylibacter sp.

text: Illumina HiSeq3000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER19_SIP_2000_bin_65_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 21

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Sphingomonadales bacterium

characteristic: organism

text: uncultured Sphingomonadales bacterium

text: Illumina HiSeq3000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER19_SIP_2000_bin_69_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 22

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Gammaproteobacteria bacterium

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq3000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER19_SIP_2000_bin_76_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 23

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: This sample represents a manually-refined metagenome-assembled genome recovered a metagenome from an Illumina paired-end read metagenome of a surface seawater sample collected around Herschel Island, Canada. The metagenome sample and related assembly can be found under ERS16475397, ERR12120022

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Pseudomonadales bacterium

characteristic: organism

text: uncultured Pseudomonadales bacterium

text: Illumina HiSeq3000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER19_SLC_1000_bin_10_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 24

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Porticoccus sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Porticoccus sp.

text: Illumina HiSeq3000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER19_SLC_1000_bin_16_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 25

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Flavobacteriales bacterium

characteristic: organism

text: uncultured Flavobacteriales bacterium

text: Illumina HiSeq3000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER19_SLC_1000_bin_38_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 26

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Sphingorhabdus sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Sphingorhabdus sp.

text: Illumina HiSeq3000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER19_SLC_1000_bin_39


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 27

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Luteolibacter sp.

characteristic: organism

text: uncultured Luteolibacter sp.

text: Illumina HiSeq3000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER19_SLC_1000_bin_44_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 28

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Pseudomonadales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Pseudomonadales bacterium

text: Illumina HiSeq3000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER19_SLC_1000_bin_48_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 29

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Flavobacteriaceae bacterium

characteristic: organism

text: uncultured Flavobacteriaceae bacterium

text: Illumina HiSeq3000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER19_SLC_1000_bin_5_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 30

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Pseudomonadales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Pseudomonadales bacterium

text: Illumina HiSeq3000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER19_SLC_1000_bin_55_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 31

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: This sample represents a manually-refined metagenome-assembled genome recovered a metagenome from an Illumina paired-end read metagenome of a surface seawater sample collected around Herschel Island, Canada. The metagenome sample and related assembly can be found under ERS16475397, ERR12120022

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Rhodobacteraceae bacterium

characteristic: organism

text: uncultured Rhodobacteraceae bacterium

text: Illumina HiSeq3000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER19_SLC_1000_bin_57_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 32

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Pseudomonadales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Pseudomonadales bacterium

text: Illumina HiSeq3000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER19_SLC_1000_bin_59_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 33

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Octadecabacter sp.

characteristic: organism

text: uncultured Octadecabacter sp.

text: Illumina HiSeq3000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER19_SLC_1000_bin_65_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 34

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Pseudomonadales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Pseudomonadales bacterium

text: Illumina HiSeq3000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER19_SLC_1000_bin_68_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 35

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Opitutales bacterium

characteristic: organism

text: uncultured Opitutales bacterium

text: Illumina HiSeq3000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER19_SLC_1000_bin_70_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Flye v2.9.2

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 36

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

text: This sample represents a manually-refined metagenome-assembled genome recovered a metagenome from an PacBio HiFi read metagenome of a surface seawater sample collected around Herschel Island, Canada. The metagenome sample and related assembly can be found under ERS16475409, ERR12120029

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Pseudomonadales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Pseudomonadales bacterium

text: PacBio Sequel II

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER19_SLC_50_PacBio_bin_12_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: Flye v2.9.2

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 37

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Pseudomonadales bacterium

characteristic: organism

text: uncultured Pseudomonadales bacterium

text: PacBio Sequel II

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER19_SLC_50_PacBio_bin_15_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 38

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

text: This sample represents a manually-refined metagenome-assembled genome recovered a metagenome from an Illumina paired-end read metagenome of a surface seawater sample collected around Herschel Island, Canada. The metagenome sample and related assembly can be found under ERS16475398, ERR12120023

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: Urechidicola croceus

characteristic: project name

characteristic: sample derived from

text: Urechidicola croceus

text: Illumina HiSeq3000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER19_SLD_250_bin_11_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 39

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Alphaproteobacteria bacterium

characteristic: organism

text: Illumina HiSeq3000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER19_SLD_250_bin_12_1

characteristic: title


characteristic: ENA-CHECKLIST

text: MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 40

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Bacteroidia bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Bacteroidia bacterium

text: Illumina HiSeq3000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER19_SLD_250_bin_13_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 41

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Pseudomonadales bacterium

characteristic: organism

text: uncultured Pseudomonadales bacterium

text: Illumina HiSeq3000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER19_SLD_250_bin_17_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 42

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured PS1 clade bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured PS1 clade bacterium

text: Illumina HiSeq3000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER19_SLD_250_bin_18_1


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Megahit v1.2.9

characteristic: assembly software

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 43

characteristic: binning parameters

text: MetaWrap v1.3.2

characteristic: binning software

text: marine biome [ENVO:00000447]

text: CheckM v1.2

text: sea water [ENVO:00002149]

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome

text: sea water

text: marine photic zone [ENVO:00000209]

text: marine metagenome

text: uncultured Porticoccus sp.

characteristic: organism

text: uncultured Porticoccus sp.

text: Illumina HiSeq3000

text: Multi-marker approach

text: Herschel Island surface seawater MAG - HER19_SLD_250_bin_2_1

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Megahit v1.2.9

text: MetaWrap v1.3.2 was used with the following parameters: -m 200 -t 20 --metabat2 �maxbin2 �concoct �run-checkm ; Followed by MetaWrap bin_refinement with the following parameters: -c 50 -x 44

text: MetaWrap v1.3.2

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: CheckM v1.2

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: sea water [ENVO:00002149]

characteristic: environmental medium

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: sea water

text: marine photic zone [ENVO:00000209]

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Flavobacteriaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Flavobacteriaceae bacterium

text: Illumina HiSeq3000

characteristic: sequencing method

text: Multi-marker approach

characteristic: taxonomic identity marker

text: Herschel Island surface seawater MAG - HER19_SLD_250_bin_21_1