text: Exp S11

text: OMM

text: [05] 5dpi

text: MK01 WT

characteristic: External Id

text: Helmholtz Center for Infection Research

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Internal_Experiment: Exp S11; Treatment: MK01 WT; Timepoint: [05] 5dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome


status: PUBLIC

text: Exp S11

tag: attribute

text: OMM

characteristic: *Mikrobiota

text: [05] 5dpi

characteristic: *Timepoint

text: MK01 sKO

characteristic: *Treatment

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Helmholtz Center for Infection Research

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Helmholtz Center for Infection Research

characteristic: collection date

text: Internal_Experiment: Exp S11; Treatment: MK01 sKO; Timepoint: [05] 5dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

characteristic: description

text: feces

text: Yes

text: Germany

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host

text: mouse gut metagenome

characteristic: organism

text: mouse gut metagenome

characteristic: title


text: Exp S11

text: OMM

text: [01] D-1

text: PBS

characteristic: External Id

text: Helmholtz Center for Infection Research

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Internal_Experiment: Exp S11; Treatment: PBS; Timepoint: [01] D-1; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S11

text: OMM

characteristic: *Mikrobiota

text: [01] D-1

characteristic: *Timepoint

text: MK01 WT

characteristic: *Treatment

text: Helmholtz Center for Infection Research

text: public

text: Internal_Experiment: Exp S11; Treatment: MK01 WT; Timepoint: [01] D-1; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S11

text: OMM

text: [02] D0

text: MK01 WT

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Helmholtz Center for Infection Research

text: public

text: Internal_Experiment: Exp S11; Treatment: MK01 WT; Timepoint: [02] D0; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S11

text: OMM

text: [02] D0

text: MK01 sKO

text: Helmholtz Center for Infection Research

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Internal_Experiment: Exp S11; Treatment: MK01 sKO; Timepoint: [02] D0; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S11

text: OMM

text: [03] 1dpi

text: PBS

text: Helmholtz Center for Infection Research

text: public

characteristic: INSDC status

characteristic: collection date

text: Internal_Experiment: Exp S11; Treatment: PBS; Timepoint: [03] 1dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

characteristic: description

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S11

text: OMM

text: [03] 1dpi

text: MK01 WT

text: Helmholtz Center for Infection Research

text: public

text: Internal_Experiment: Exp S11; Treatment: MK01 WT; Timepoint: [03] 1dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host

text: mouse gut metagenome

characteristic: organism

text: mouse gut metagenome


text: Exp S11

text: OMM

text: [03] 1dpi

text: MK01 sKO

characteristic: External Id

text: Helmholtz Center for Infection Research

text: public

characteristic: SRA accession

text: Internal_Experiment: Exp S11; Treatment: MK01 sKO; Timepoint: [03] 1dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome

characteristic: title


text: Exp S11

text: OMM

characteristic: *Mikrobiota

text: [04] 3dpi

characteristic: *Timepoint

text: PBS

text: Helmholtz Center for Infection Research

text: public

characteristic: Submitter Id

text: Internal_Experiment: Exp S11; Treatment: PBS; Timepoint: [04] 3dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S11

text: OMM

text: [04] 3dpi

text: MK01 WT

characteristic: *Treatment

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Helmholtz Center for Infection Research

text: public

text: Internal_Experiment: Exp S11; Treatment: MK01 WT; Timepoint: [04] 3dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S11

text: OMM

text: [04] 3dpi

text: MK01 sKO

characteristic: ENA-LAST-UPDATE

text: Helmholtz Center for Infection Research

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Internal_Experiment: Exp S11; Treatment: MK01 sKO; Timepoint: [04] 3dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S3

text: OMM

text: [03] 1dpi

text: PBS

text: Helmholtz Center for Infection Research

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: Internal_Experiment: Exp S3; Treatment: PBS; Timepoint: [03] 1dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S3

text: OMM

text: [03] 1dpi

text: MK01 WT

text: Helmholtz Center for Infection Research

text: public

text: Internal_Experiment: Exp S3; Treatment: MK01 WT; Timepoint: [03] 1dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

characteristic: description

text: feces

text: Yes

text: Germany

characteristic: geographic location (country and/or sea)

text: Mus musculus

characteristic: host

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S3

text: OMM

text: [03] 1dpi

text: MK01 sKO

characteristic: External Id

text: Helmholtz Center for Infection Research

text: public

characteristic: SRA accession

text: Internal_Experiment: Exp S3; Treatment: MK01 sKO; Timepoint: [03] 1dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

characteristic: organism

text: mouse gut metagenome


text: Exp S3

text: OMM

characteristic: *Mikrobiota

text: [04] 3dpi

characteristic: *Timepoint

text: PBS

text: Helmholtz Center for Infection Research

text: public

text: Internal_Experiment: Exp S3; Treatment: PBS; Timepoint: [04] 3dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome

characteristic: title


text: Exp S3

text: OMM

text: [04] 3dpi

text: MK01 WT

characteristic: *Treatment

characteristic: ENA-CHECKLIST

text: Helmholtz Center for Infection Research

text: public

characteristic: Submitter Id

text: Internal_Experiment: Exp S3; Treatment: MK01 WT; Timepoint: [04] 3dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S3

text: OMM

text: [04] 3dpi

text: MK01 sKO

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Helmholtz Center for Infection Research

characteristic: INSDC center name

text: public

text: Internal_Experiment: Exp S3; Treatment: MK01 sKO; Timepoint: [04] 3dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S3

text: OMM

text: [05] 5dpi

text: PBS

text: Helmholtz Center for Infection Research

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Internal_Experiment: Exp S3; Treatment: PBS; Timepoint: [05] 5dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S3

text: OMM

text: [05] 5dpi

text: MK01 WT

text: Helmholtz Center for Infection Research

text: public

characteristic: collection date

text: Internal_Experiment: Exp S3; Treatment: MK01 WT; Timepoint: [05] 5dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

characteristic: description

text: feces

text: Yes

text: Germany

characteristic: geographic location (country and/or sea)

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S3

text: OMM

text: [05] 5dpi

text: MK01 sKO

characteristic: External Id

text: Helmholtz Center for Infection Research

text: public

characteristic: SRA accession

text: Internal_Experiment: Exp S3; Treatment: MK01 sKO; Timepoint: [05] 5dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

characteristic: host

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S6

text: OMM

characteristic: *Mikrobiota

text: [01] D-1

characteristic: *Timepoint

text: MK01 WT

text: Helmholtz Center for Infection Research

text: public

text: Internal_Experiment: Exp S6; Treatment: MK01 WT; Timepoint: [01] D-1; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

characteristic: organism

text: mouse gut metagenome


text: Exp S6

text: OMM

text: [01] D-1

text: MK01 sKO

characteristic: *Treatment

characteristic: ENA-CHECKLIST

text: Helmholtz Center for Infection Research

text: public

text: Internal_Experiment: Exp S6; Treatment: MK01 sKO; Timepoint: [01] D-1; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome

characteristic: title


text: Exp S6

text: OMM

text: [02] D0

text: PBS

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Helmholtz Center for Infection Research

text: public

characteristic: Submitter Id

text: Internal_Experiment: Exp S6; Treatment: PBS; Timepoint: [02] D0; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S6

text: OMM

text: [02] D0

text: MK01 WT

text: Helmholtz Center for Infection Research

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Internal_Experiment: Exp S6; Treatment: MK01 WT; Timepoint: [02] D0; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S6

text: OMM

text: [02] D0

text: MK01 sKO

text: Helmholtz Center for Infection Research

text: public

characteristic: INSDC status

characteristic: collection date

text: Internal_Experiment: Exp S6; Treatment: MK01 sKO; Timepoint: [02] D0; Mikrobiota: OMM; Related_figure: Ext.Fig.7

characteristic: description

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S6

text: OMM

text: [03] 1dpi

text: PBS

characteristic: External Id

text: Helmholtz Center for Infection Research

text: public

characteristic: SRA accession

text: Internal_Experiment: Exp S6; Treatment: PBS; Timepoint: [03] 1dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

characteristic: geographic location (country and/or sea)

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S6

text: OMM

characteristic: *Mikrobiota

text: [03] 1dpi

characteristic: *Timepoint

text: MK01 WT

text: Helmholtz Center for Infection Research

text: public

text: Internal_Experiment: Exp S6; Treatment: MK01 WT; Timepoint: [03] 1dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

characteristic: host

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S6

text: OMM

text: [03] 1dpi

text: MK01 sKO

characteristic: *Treatment

characteristic: ENA-CHECKLIST

text: Helmholtz Center for Infection Research

text: public

text: Internal_Experiment: Exp S6; Treatment: MK01 sKO; Timepoint: [03] 1dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

characteristic: organism

text: mouse gut metagenome


text: Exp S6

text: OMM

text: [04] 3dpi

text: PBS

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Helmholtz Center for Infection Research

text: public

text: Internal_Experiment: Exp S6; Treatment: PBS; Timepoint: [04] 3dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome

characteristic: title


text: Exp S6

text: OMM

text: [04] 3dpi

text: MK01 WT

text: Helmholtz Center for Infection Research

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: Internal_Experiment: Exp S6; Treatment: MK01 WT; Timepoint: [04] 3dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S6

text: OMM

text: [04] 3dpi

text: MK01 sKO

text: Helmholtz Center for Infection Research

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: Internal_Experiment: Exp S6; Treatment: MK01 sKO; Timepoint: [04] 3dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S6

text: OMM

text: [05] 5dpi

text: PBS

characteristic: External Id

text: Helmholtz Center for Infection Research

text: public

characteristic: SRA accession

text: Internal_Experiment: Exp S6; Treatment: PBS; Timepoint: [05] 5dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

characteristic: description

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S6

text: OMM

characteristic: *Mikrobiota

text: [05] 5dpi

characteristic: *Timepoint

text: MK01 WT

text: Helmholtz Center for Infection Research

text: public

text: Internal_Experiment: Exp S6; Treatment: MK01 WT; Timepoint: [05] 5dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

characteristic: geographic location (country and/or sea)

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S6

text: OMM

text: [05] 5dpi

text: MK01 sKO

characteristic: *Treatment

characteristic: ENA-CHECKLIST

text: Helmholtz Center for Infection Research

text: public

text: Internal_Experiment: Exp S6; Treatment: MK01 sKO; Timepoint: [05] 5dpi; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

characteristic: host

text: mouse gut metagenome

text: mouse gut metagenome


text: Exp S3

text: OMM

text: [01] D-1

text: PBS

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: Helmholtz Center for Infection Research

text: public

text: Internal_Experiment: Exp S3; Treatment: PBS; Timepoint: [01] D-1; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

characteristic: organism

text: mouse gut metagenome


text: Exp S3

text: OMM

text: [01] D-1

text: MK01 sKO

text: Helmholtz Center for Infection Research

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Internal_Experiment: Exp S3; Treatment: MK01 sKO; Timepoint: [01] D-1; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome

characteristic: title


text: Exp S3

text: OMM

text: [01] D-1

text: MK01 WT

text: Helmholtz Center for Infection Research

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Internal_Experiment: Exp S3; Treatment: MK01 WT; Timepoint: [01] D-1; Mikrobiota: OMM; Related_figure: Ext.Fig.7

text: feces

text: Yes

text: Germany

text: Mus musculus

text: mouse gut metagenome

text: mouse gut metagenome


characteristic: External Id

text: YUHS

text: public

characteristic: SRA accession

characteristic: collection date

text: human

characteristic: common name

text: YF1 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF2 sample RNA sequencing

characteristic: description

text: South Korea

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-CHECKLIST

text: YUHS

text: public

text: human

text: YF5 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF6 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF7 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF8 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF9 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF10 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF11 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF12 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF13 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF14 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF15 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF16 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF17 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF18 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF19 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF20 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF21 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF22 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: S4 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF26 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: Y1 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: Y3 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: Y5 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: Y8 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF4 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF23 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF24 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF25 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: YUHS

text: public

text: human

text: YF27 sample RNA sequencing

text: South Korea

text: Homo sapiens

text: Homo sapiens


text: public

tag: Namespace:Respiratory Virus Unit, Microbiology Services Colindale, Public Health England

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: receipt date

text: active surveillance in response to outbreak

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Respiratory Virus Unit, Microbiology Services Colindale, Public Health England

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: collection date

text: not provided

text: not provided

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

text: not provided

characteristic: title

text: not provided


characteristic: ENA-CHECKLIST

text: GHENT UNIVERSITY

text: public

tag: Namespace:GHENT UNIVERSITY

text: Digestive tract environment

characteristic: broad-scale environmental context

text: Sample number 0; Donor 1; Faecal sample; Faecal sample; Day 0; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 0; Donor 1; FS; FS; Day 0


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 37; Donor 1; Standardised pattern; Proximal colon; Day 10; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 37; Donor 1; ST; P; Day 10


characteristic: ENA-CHECKLIST

text: GHENT UNIVERSITY

text: public

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 38; Donor 1; Standardised pattern; Distal colon; Day 10; Luminal sample

characteristic: description

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 38; Donor 1; ST; D; Day 10

characteristic: title


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 39; Donor 1; Western pattern; Proximal colon; Day 10; Luminal sample

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 39; Donor 1; RG; P; Day 10


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 40; Donor 1; Western pattern; Distal colon; Day 10; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 40; Donor 1; RG; D; Day 10


characteristic: ENA-CHECKLIST

text: GHENT UNIVERSITY

text: public

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 41; Donor 1; Time-restricted pattern; Proximal colon; Day 10; Luminal sample

characteristic: description

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 41; Donor 1; SM; P; Day 10

characteristic: title


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 42; Donor 1; Time-restricted pattern; Distal colon; Day 10; Luminal sample

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 42; Donor 1; SM; D; Day 10


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 43; Donor 1; Standardised pattern; Proximal colon; Day 11; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 43; Donor 1; ST; P; Day 11


characteristic: ENA-CHECKLIST

text: GHENT UNIVERSITY

text: public

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 44; Donor 1; Standardised pattern; Distal colon; Day 11; Luminal sample

characteristic: description

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 44; Donor 1; ST; D; Day 11

characteristic: title


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 45; Donor 1; Western pattern; Proximal colon; Day 11; Luminal sample

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 45; Donor 1; RG; P; Day 11


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 46; Donor 1; Western pattern; Distal colon; Day 11; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 46; Donor 1; RG; D; Day 11


characteristic: ENA-CHECKLIST

text: GHENT UNIVERSITY

text: public

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 47; Donor 1; Time-restricted pattern; Proximal colon; Day 11; Luminal sample

characteristic: description

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 47; Donor 1; SM; P; Day 11

characteristic: title


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 48; Donor 1; Time-restricted pattern; Distal colon; Day 11; Luminal sample

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 48; Donor 1; SM; D; Day 11


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 49; Donor 1; Standardised pattern; Proximal colon; Day 11; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 49; Donor 1; ST; P; Day 11


characteristic: ENA-CHECKLIST

text: GHENT UNIVERSITY

text: public

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 50; Donor 1; Standardised pattern; Distal colon; Day 11; Luminal sample

characteristic: description

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 50; Donor 1; ST; D; Day 11

characteristic: title


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 51; Donor 1; Western pattern; Proximal colon; Day 11; Luminal sample

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 51; Donor 1; RG; P; Day 11


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 52; Donor 1; Western pattern; Distal colon; Day 11; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 52; Donor 1; RG; D; Day 11


characteristic: ENA-CHECKLIST

text: GHENT UNIVERSITY

text: public

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 53; Donor 1; Time-restricted pattern; Proximal colon; Day 11; Luminal sample

characteristic: description

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 53; Donor 1; SM; P; Day 11

characteristic: title


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 54; Donor 1; Time-restricted pattern; Distal colon; Day 11; Luminal sample

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 54; Donor 1; SM; D; Day 11


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 61; Donor 1; Standardised pattern; Proximal colon; Day 13; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 61; Donor 1; ST; P; Day 13


characteristic: ENA-CHECKLIST

text: GHENT UNIVERSITY

text: public

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 62; Donor 1; Standardised pattern; Distal colon; Day 13; Luminal sample

characteristic: description

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 62; Donor 1; ST; D; Day 13

characteristic: title


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 63; Donor 1; Western pattern; Proximal colon; Day 13; Luminal sample

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 63; Donor 1; RG; P; Day 13


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 64; Donor 1; Western pattern; Distal colon; Day 13; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 64; Donor 1; RG; D; Day 13


characteristic: ENA-CHECKLIST

text: GHENT UNIVERSITY

text: public

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 65; Donor 1; Time-restricted pattern; Proximal colon; Day 13; Luminal sample

characteristic: description

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 65; Donor 1; SM; P; Day 13

characteristic: title


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 66; Donor 1; Time-restricted pattern; Distal colon; Day 13; Luminal sample

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 66; Donor 1; SM; D; Day 13


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 67; Donor 1; Standardised pattern; Proximal colon; Day 13; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 67; Donor 1; ST; P; Day 13


characteristic: ENA-CHECKLIST

text: GHENT UNIVERSITY

text: public

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 68; Donor 1; Standardised pattern; Distal colon; Day 13; Luminal sample

characteristic: description

text: SHIME environment

text: Belgium

characteristic: geographic location (country and/or sea)

text: human-gut

text: City

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 68; Donor 1; ST; D; Day 13

characteristic: title


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 69; Donor 1; Western pattern; Proximal colon; Day 13; Luminal sample

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 69; Donor 1; RG; P; Day 13


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Respiratory Virus Unit, Microbiology Services Colindale, Public Health England

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: receipt date

text: active surveillance in response to outbreak

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 70; Donor 1; Western pattern; Distal colon; Day 13; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 70; Donor 1; RG; D; Day 13

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 71; Donor 1; Time-restricted pattern; Proximal colon; Day 13; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 71; Donor 1; SM; P; Day 13


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 72; Donor 1; Time-restricted pattern; Distal colon; Day 13; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 72; Donor 1; SM; D; Day 13


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 73; Donor 1; Standardised pattern; Proximal colon; Day 13; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 73; Donor 1; ST; P; Day 13

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 74; Donor 1; Standardised pattern; Distal colon; Day 13; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 74; Donor 1; ST; D; Day 13


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 75; Donor 1; Western pattern; Proximal colon; Day 13; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 75; Donor 1; RG; P; Day 13


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 76; Donor 1; Western pattern; Distal colon; Day 13; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 76; Donor 1; RG; D; Day 13

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 77; Donor 1; Time-restricted pattern; Proximal colon; Day 13; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 77; Donor 1; SM; P; Day 13


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 78; Donor 1; Time-restricted pattern; Distal colon; Day 13; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 78; Donor 1; SM; D; Day 13


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 79; Donor 1; Standardised pattern; Proximal colon; Day 14; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 79; Donor 1; ST; P; Day 14

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 80; Donor 1; Standardised pattern; Distal colon; Day 14; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 80; Donor 1; ST; D; Day 14


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 81; Donor 1; Western pattern; Proximal colon; Day 14; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 81; Donor 1; RG; P; Day 14


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 82; Donor 1; Western pattern; Distal colon; Day 14; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 82; Donor 1; RG; D; Day 14

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 83; Donor 1; Time-restricted pattern; Proximal colon; Day 14; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 83; Donor 1; SM; P; Day 14


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 84; Donor 1; Time-restricted pattern; Distal colon; Day 14; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 84; Donor 1; SM; D; Day 14


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 85; Donor 1; Standardised pattern; Proximal colon; Day 14; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 85; Donor 1; ST; P; Day 14

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 86; Donor 1; Standardised pattern; Distal colon; Day 14; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 86; Donor 1; ST; D; Day 14


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 87; Donor 1; Western pattern; Proximal colon; Day 14; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 87; Donor 1; RG; P; Day 14


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 88; Donor 1; Western pattern; Distal colon; Day 14; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 88; Donor 1; RG; D; Day 14

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 89; Donor 1; Time-restricted pattern; Proximal colon; Day 14; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 89; Donor 1; SM; P; Day 14


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 90; Donor 1; Time-restricted pattern; Distal colon; Day 14; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 90; Donor 1; SM; D; Day 14


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 91; Donor 1; Standardised pattern; Proximal colon; Day 14; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 91; Donor 1; ST; P; Day 14

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 92; Donor 1; Standardised pattern; Distal colon; Day 14; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 92; Donor 1; ST; D; Day 14


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 93; Donor 1; Western pattern; Proximal colon; Day 14; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 93; Donor 1; RG; P; Day 14


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 94; Donor 1; Western pattern; Distal colon; Day 14; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 94; Donor 1; RG; D; Day 14

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 95; Donor 1; Time-restricted pattern; Proximal colon; Day 14; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 95; Donor 1; SM; P; Day 14


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 96; Donor 1; Time-restricted pattern; Distal colon; Day 14; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 96; Donor 1; SM; D; Day 14


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 97; Donor 1; Standardised pattern; Proximal colon; Day 15; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 97; Donor 1; ST; P; Day 15

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Respiratory Virus Unit, Microbiology Services Colindale, Public Health England

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: receipt date

text: active surveillance in response to outbreak

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 98; Donor 1; Standardised pattern; Distal colon; Day 15; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 98; Donor 1; ST; D; Day 15

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 99; Donor 1; Western pattern; Proximal colon; Day 15; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 99; Donor 1; RG; P; Day 15


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 100; Donor 1; Western pattern; Distal colon; Day 15; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 100; Donor 1; RG; D; Day 15


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 101; Donor 1; Time-restricted pattern; Proximal colon; Day 15; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 101; Donor 1; SM; P; Day 15

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 102; Donor 1; Time-restricted pattern; Distal colon; Day 15; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 102; Donor 1; SM; D; Day 15


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 103; Donor 1; Standardised pattern; Proximal colon; Day 16; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 103; Donor 1; ST; P; Day 16


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 104; Donor 1; Standardised pattern; Distal colon; Day 16; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 104; Donor 1; ST; D; Day 16

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 105; Donor 1; Western pattern; Proximal colon; Day 16; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 105; Donor 1; RG; P; Day 16


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 106; Donor 1; Western pattern; Distal colon; Day 16; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 106; Donor 1; RG; D; Day 16


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 107; Donor 1; Time-restricted pattern; Proximal colon; Day 16; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 107; Donor 1; SM; P; Day 16

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 108; Donor 1; Time-restricted pattern; Distal colon; Day 16; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 108; Donor 1; SM; D; Day 16


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 109; Donor 1; Standardised pattern; Proximal colon; Day 16; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 109; Donor 1; ST; P; Day 16


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 110; Donor 1; Standardised pattern; Distal colon; Day 16; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 110; Donor 1; ST; D; Day 16

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 111; Donor 1; Western pattern; Proximal colon; Day 16; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 111; Donor 1; RG; P; Day 16


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 112; Donor 1; Western pattern; Distal colon; Day 16; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 112; Donor 1; RG; D; Day 16


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 113; Donor 1; Time-restricted pattern; Proximal colon; Day 16; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 113; Donor 1; SM; P; Day 16

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 114; Donor 1; Time-restricted pattern; Distal colon; Day 16; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 114; Donor 1; SM; D; Day 16


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 200; Donor 2; Faecal sample; Faecal sample; Day 0; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 200; Donor 2; FS; FS; Day 0


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 237; Donor 2; Standardised pattern; Proximal colon; Day 10; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 237; Donor 2; ST; P; Day 10

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 238; Donor 2; Standardised pattern; Distal colon; Day 10; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 238; Donor 2; ST; D; Day 10


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 239; Donor 2; Western pattern; Proximal colon; Day 10; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 239; Donor 2; RG; P; Day 10


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 240; Donor 2; Western pattern; Distal colon; Day 10; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 240; Donor 2; RG; D; Day 10

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 241; Donor 2; Time-restricted pattern; Proximal colon; Day 10; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 241; Donor 2; SM; P; Day 10


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 242; Donor 2; Time-restricted pattern; Distal colon; Day 10; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 242; Donor 2; SM; D; Day 10


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 243; Donor 2; Standardised pattern; Proximal colon; Day 11; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 243; Donor 2; ST; P; Day 11

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 244; Donor 2; Standardised pattern; Distal colon; Day 11; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 244; Donor 2; ST; D; Day 11


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 245; Donor 2; Western pattern; Proximal colon; Day 11; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 245; Donor 2; RG; P; Day 11


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 246; Donor 2; Western pattern; Distal colon; Day 11; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 246; Donor 2; RG; D; Day 11

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Respiratory Virus Unit, Microbiology Services Colindale, Public Health England

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: receipt date

text: active surveillance in response to outbreak

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 247; Donor 2; Time-restricted pattern; Proximal colon; Day 11; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 247; Donor 2; SM; P; Day 11

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 248; Donor 2; Time-restricted pattern; Distal colon; Day 11; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 248; Donor 2; SM; D; Day 11


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 249; Donor 2; Standardised pattern; Proximal colon; Day 11; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 249; Donor 2; ST; P; Day 11


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 250; Donor 2; Standardised pattern; Distal colon; Day 11; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 250; Donor 2; ST; D; Day 11

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 251; Donor 2; Western pattern; Proximal colon; Day 11; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 251; Donor 2; RG; P; Day 11


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 252; Donor 2; Western pattern; Distal colon; Day 11; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 252; Donor 2; RG; D; Day 11


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 253; Donor 2; Time-restricted pattern; Proximal colon; Day 11; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 253; Donor 2; SM; P; Day 11

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 254; Donor 2; Time-restricted pattern; Distal colon; Day 11; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 254; Donor 2; SM; D; Day 11


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 261; Donor 2; Standardised pattern; Proximal colon; Day 13; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 261; Donor 2; ST; P; Day 13


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 262; Donor 2; Standardised pattern; Distal colon; Day 13; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 262; Donor 2; ST; D; Day 13

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 263; Donor 2; Western pattern; Proximal colon; Day 13; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 263; Donor 2; RG; P; Day 13


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 264; Donor 2; Western pattern; Distal colon; Day 13; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 264; Donor 2; RG; D; Day 13


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 265; Donor 2; Time-restricted pattern; Proximal colon; Day 13; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 265; Donor 2; SM; P; Day 13

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 266; Donor 2; Time-restricted pattern; Distal colon; Day 13; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 266; Donor 2; SM; D; Day 13


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 268; Donor 2; Standardised pattern; Distal colon; Day 13; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 268; Donor 2; ST; D; Day 13


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 269; Donor 2; Western pattern; Proximal colon; Day 13; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 269; Donor 2; RG; P; Day 13

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 270; Donor 2; Western pattern; Distal colon; Day 13; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 270; Donor 2; RG; D; Day 13


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 271; Donor 2; Time-restricted pattern; Proximal colon; Day 13; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 271; Donor 2; SM; P; Day 13


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 272; Donor 2; Time-restricted pattern; Distal colon; Day 13; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 272; Donor 2; SM; D; Day 13

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: Digestive tract environment

text: Sample number 273; Donor 2; Standardised pattern; Proximal colon; Day 13; Luminal sample

text: SHIME environment

text: Belgium

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 273; Donor 2; ST; P; Day 13


text: GHENT UNIVERSITY

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Digestive tract environment

characteristic: broad-scale environmental context

characteristic: collection date

text: Sample number 274; Donor 2; Standardised pattern; Distal colon; Day 13; Luminal sample

characteristic: description

text: SHIME environment

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: human-gut

text: City

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: 274; Donor 2; ST; D; Day 13


text: GHENT UNIVERSITY

text: public

text: Digestive tract environment

text: Sample number 275; Donor 2; Western pattern; Proximal colon; Day 13; Luminal sample

text: SHIME environment

text: Belgium

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: City

characteristic: local environmental context

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: 275; Donor 2; RG; P; Day 13

characteristic: title