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text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-302434/2022

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2022-11-28

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-03-21

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-655581/2022

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

text: active surveillance in response to outbreak


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-452808/2022

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-20396/2020

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-215828/2021

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=3,last_infection_date=2022-07-18

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-07-11

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Human

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-540325/2022

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-366664/2022

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-378983/2022

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2022-02-07

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-400101/2022

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Human

text: n_infections=2,last_infection_date=2022-07-25

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2021-11-29

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-431574/2022

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-653561/2022

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

text: active surveillance in response to outbreak


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2022-01-31

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-613279/2022

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-508538/2022

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2020-08-17

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-01-24

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Human

text: n_infections=2,last_infection_date=2022-01-17

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-588067/2022

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-415280/2022

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2022-07-04

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-01-03

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-621745/2022

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2022-02-21

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=3,last_infection_date=2022-11-28

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Human

text: n_infections=2,last_infection_date=2022-02-28

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

text: active surveillance in response to outbreak


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=3,last_infection_date=2021-11-15

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: NIPH

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ELIXIR-Norway

characteristic: broker name

characteristic: collection date

text: N. meningitidis

characteristic: common name

text: Norway

text: not provided

text: Homo sapiens

text: Joint fluid

text: Neisseria meningitidis

text: Neisseria meningitidis


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: UCSDMI

characteristic: INSDC last update

text: public

text: COL

text: not reported

text: Blood 11/21/19- NSF, WBC 9.6k, iron 145, ALP 376. Blood June 2020 WNL. Blood July 2020 WNL.

characteristic: bloodwork

text: Yes

text: USA

characteristic: country

text: Small and medium cocci, small rods, rare medium rods

characteristic: cytology

characteristic: date

text: dolphin FMT sample SD102726

characteristic: description

text: TRUE

text: COL

text: No

characteristic: duplicate

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

text: Capelin Herring Eulachon Threadfin Squid

characteristic: fish

text: Capelin Herring Eulachon Eulachon Threadfin Squid

text: USA:CA:La Jolla

text: USA

characteristic: geographic location (country and/or sea)

text: Tursiops truncatus

characteristic: host scientific name

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: COL

text: pounds

text: Donor

characteristic: latitude

characteristic: location

characteristic: longitude

characteristic: meds

text: cetacean metagenome

characteristic: pair

text: One

characteristic: phase

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 1

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

characteristic: sex

text: Donor

characteristic: status

text: dolphin test

text: Donor

text: Donor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SPA

text: not reported

text: Blood 3/12/20 - NSF, WBC 8.7k, normal differential. Iron wnl 108, ALP 246. Blood 4/2/2020 - NSF, WBC 7.1k, mild lymphopenia. Iron wnl 163, ALP 274.

characteristic: bloodwork

characteristic: collection date

text: No

text: USA

characteristic: country

text: Yes - small cocci and rods, abundant lipid droplets, fish spines, occ diplococci, diverse bacterial population

text: dolphin FMT sample SD102728

text: TRUE

text: SPA

text: No

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

text: Capelin Herring Eulachon Silver Mullet

text: Capelin Herring Eulachon Eulachon Silver Mullet

text: USA:CA:La Jolla

text: USA

text: Tursiops truncatus

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: SPA

text: pounds

text: Donor

text: Doing well with no current medical issues.

text: cetacean metagenome

characteristic: organism

text: One

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 1

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

text: Donor

characteristic: title

text: dolphin test

text: Donor

text: Donor


text: UCSDMI

text: public

text: ECL

text: Performed 4/16- present. See excel sheet.

text: Blood 3/11/2020 - fairly unremarkable. WBC 7.8k, normal differential, 1% bands; iron 185, ALP 753

text: Yes

text: USA

text: Yes - small cocci, small fish spines, occ small rods, rare medium rods, increased diversity compared to samples in September

characteristic: cytology

characteristic: date

text: dolphin FMT sample SD102770

characteristic: description

text: TRUE

text: ECL

text: No

characteristic: duplicate

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

text: Capelin Herring Eulachon Finger Mullet Squid

characteristic: fish

text: Eulachon, Capelin, Finger Mullet, Herring, Squid

text: USA:CA:La Jolla

text: USA

characteristic: geographic location (country and/or sea)

text: Tursiops truncatus

characteristic: host scientific name

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: ECL

text: pounds

text: Recipient

characteristic: latitude

characteristic: location

characteristic: longitude

text: FMT history Aug 2019 - Dec 2-19 . Behaviorally doing well.

text: diazepam April 2019- 11/18/2019, ondansetron 6/2019-12/3/2019, Cerenia 3/30/2019- 11/06/2019, kaopectate 7/12-8/7/2019, ranitidine 5/20-5/25/2019, Simplicef (cefpodoxime) 7/30-8/6/2019, sucralfate 5/20-5/25/2019.

characteristic: meds

text: cetacean metagenome

characteristic: pair

text: One

characteristic: phase

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 1

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

characteristic: sex

text: Recipient

text: dolphin test

text: Recipient

text: Recipient


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: KAN

text: not reported

text: Blood 1/14/2020 - WBC 8.9k, normal differential, stable iron (212), ALP (342)

characteristic: bloodwork

characteristic: collection date

text: Yes

text: USA

characteristic: country

text: Mixed bac ++, epi +, rare fish spine

text: dolphin FMT sample SD103393

text: TRUE

text: KAN

text: No

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

text: USA:CA:La Jolla

text: USA

text: Tursiops truncatus

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: KAN

text: pounds

text: Donor

text: not reported

text: cetacean metagenome

characteristic: organism

text: One

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 1

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

text: Donor

characteristic: status

text: dolphin test

text: Donor

text: Donor


text: UCSDMI

text: public

text: ZPR

text: not reported

text: Blood 1/14/2020 - WBC 8.4k, iron mildly decreased (169).

text: Yes

text: USA

text: Small rods and cocci, abundant fish spines

characteristic: cytology

characteristic: date

text: dolphin FMT sample SD103397

characteristic: description

text: TRUE

text: ZPR

text: No

characteristic: duplicate

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Recipient _3

text: Clinical Test

characteristic: fish

text: USA:CA:La Jolla

text: USA

characteristic: geographic location (country and/or sea)

text: Tursiops truncatus

characteristic: host scientific name

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: ZPR

text: pounds

text: Recipient

characteristic: latitude

characteristic: location

characteristic: longitude

text: Probiotic 10-20 9/23/2019-2/14/20, maropitant 12/31/19 - 1/14/20, ondansetron 12/31/19-1/14/20

characteristic: meds

text: cetacean metagenome

characteristic: pair

text: One

characteristic: phase

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 1

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

text: Recipient

characteristic: title

text: dolphin test

text: Recipient

text: Recipient


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: KON

text: not reported

text: Blood 2/14/2020- NSF, WBC 6.8k, normal morph and differential, iron stable (249), ALP stable (214)

characteristic: bloodwork

characteristic: collection date

text: Yes

text: USA

characteristic: country

text: Small cocci, occassional small and medium rods, fish spines

text: dolphin FMT sample SD103417

text: TRUE

text: KON

text: No

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

text: Capelin Herring Eulachon Threadfin Squid

text: USA:CA:La Jolla

text: USA

text: Tursiops truncatus

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: KON

text: pounds

text: Donor

text: Mild hemorrhagic gastritis in February, on omeprazole and sucralfate, resolved.

text: not reported

text: cetacean metagenome

characteristic: organism

text: One

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 1

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: female

characteristic: sex

text: Donor

text: dolphin test

text: Donor

text: Donor


text: UCSDMI

text: public

text: SPA

text: not reported

text: Blood 3/12/20 - NSF, WBC 8.7k, normal differential. Iron wnl 108, ALP 246. Blood 4/2/2020 - NSF, WBC 7.1k, mild lymphopenia. Iron wnl 163, ALP 274.

text: No

text: USA

text: Small rods and cocci, occassional fish spine

characteristic: cytology

characteristic: date

text: dolphin FMT sample SD103421

characteristic: description

text: TRUE

text: SPA

text: No

characteristic: duplicate

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

text: Capelin Herring Eulachon Silver Mullet

characteristic: fish

text: Capelin Herring Eulachon Eulachon Silver Mullet

text: USA:CA:La Jolla

text: USA

characteristic: geographic location (country and/or sea)

text: Tursiops truncatus

characteristic: host scientific name

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: SPA

text: pounds

text: Donor

characteristic: latitude

characteristic: location

characteristic: longitude

characteristic: meds

text: cetacean metagenome

characteristic: pair

text: One

characteristic: phase

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 2

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

text: Donor

characteristic: status

text: dolphin test

text: Donor

text: Donor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not applicable

text: not applicable

text: not applicable

text: not applicable

characteristic: bloodwork

characteristic: collection date

text: not applicable

text: USA

characteristic: country

text: not applicable

text: not applicable

text: dolphin FMT sample SD103581

text: TRUE

text: Control

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Control

text: Controls

text: not applicable

text: not applicable

text: USA:CA:La Jolla

text: USA

text: Tursiops truncatus

text: not applicable

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: not applicable

text: not applicable

text: pounds

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: cetacean metagenome

characteristic: organism

text: not applicable

text: not applicable

text: not applicable

text: UCSD

text: FALSE

text: dolphin fecal material

text: not applicable

text: not applicable

text: dolphin fecal material

text: cetacean metagenome

text: not applicable

text: not applicable

characteristic: title

text: dolphin test

text: not applicable

text: not applicable


text: UCSDMI

text: public

text: KON

text: not reported

text: Yes

text: USA

text: 2+ bacteria (more rods than cocci), abundant fish spine, epithelial cells

characteristic: cytology

characteristic: date

text: dolphin FMT sample SD103842

characteristic: description

text: TRUE

text: KON

text: No

characteristic: duplicate

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

characteristic: fish

text: Capelin Herring Eulachon Eulachon Threadfin Squid

text: USA:CA:La Jolla

text: USA

characteristic: geographic location (country and/or sea)

text: Tursiops truncatus

characteristic: host scientific name

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: KON

text: pounds

text: Donor

characteristic: latitude

characteristic: location

characteristic: longitude

text: sucalfrate (2/13-3/31/20), omeprazole (2/14-4/8/20)

characteristic: meds

text: cetacean metagenome

characteristic: pair

text: One

characteristic: phase

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 2

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: female

characteristic: sex

text: Donor

text: dolphin test

text: Donor

text: Donor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COH

text: not reported

text: Blood 4/22/2020 - mild mature neutrophilia (WBC 12.2, 9k neutrophils and 2% bands); normocytic, normochromic anemia PCV 32%.

characteristic: bloodwork

characteristic: collection date

text: No

text: USA

characteristic: country

text: Rare epithelial cells, fish spines, very rare rods

text: dolphin FMT sample SD103847

text: TRUE

text: COH

text: No

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

text: USA:CA:La Jolla

text: USA

text: Tursiops truncatus

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: COH

text: pounds

text: Recipient

text: 302N/ NAB

text: altrenogest (1/31/2020 - present). Previous meds: maropitant (1/4-2/14), omeprazole (1/28-2/4), ondansetron (1/24-2/14), tramadol (1/28-2/5).

text: cetacean metagenome

characteristic: organism

text: One

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 1

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: female

text: Recipient

characteristic: status

text: dolphin test

text: Recipient

text: Recipient


text: UCSDMI

text: public

text: AUS

text: not reported

text: Blood 1/2/2020- WBC 5.9k, normal differential, PCV 40%, stable ALP (390) and iron (184)

text: Yes

text: USA

text: small cocci, occassional small & medium rods, rare fish spines

characteristic: cytology

characteristic: date

text: dolphin FMT sample SD103856

characteristic: description

text: TRUE

text: AUS

text: No

characteristic: duplicate

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

characteristic: fish

text: USA:CA:La Jolla

text: USA

characteristic: geographic location (country and/or sea)

text: Tursiops truncatus

characteristic: host scientific name

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: AUS

text: pounds

text: Donor

characteristic: latitude

characteristic: location

characteristic: longitude

text: none currently. Previous meds: ciprofloxacin eye drops (6/26-7/15/20), NPG eye drops (6/8-7/15/20), tacrolimus eye drops (7/1-8/26/20), ketolorac eye drops (6/8 - 6/26/20), tramadol (5/15-7/15/20)

characteristic: meds

text: cetacean metagenome

characteristic: pair

text: One

characteristic: phase

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 1

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

text: Donor

text: dolphin test

characteristic: title

text: Donor

text: Donor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COL

text: not reported

text: Blood 11/21/19- NSF, WBC 9.6k, iron 145, ALP 376. Blood June 2020 WNL. Blood July 2020 WNL.

characteristic: bloodwork

characteristic: collection date

text: Yes

text: USA

characteristic: country

text: Small and medium rods, small cocci, rare algae

text: dolphin FMT sample SD103875

text: TRUE

text: COL

text: No

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

text: USA:CA:La Jolla

text: USA

text: Tursiops truncatus

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: COL

text: pounds

text: Donor

text: cetacean metagenome

characteristic: organism

text: One

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 2

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

characteristic: sex

text: Donor

text: dolphin test

text: Donor

text: Donor


text: UCSDMI

text: public

text: ECL

text: Performed 4/16- present. See excel sheet.

text: Blood 3/11/2020 - fairly unremarkable. WBC 7.8k, normal differential, 1% bands; iron 185, ALP 753

text: Yes

text: USA

text: small rods and cocci, rare medium rod

characteristic: cytology

characteristic: date

text: dolphin FMT sample SD103979

characteristic: description

text: TRUE

text: ECL

text: No

characteristic: duplicate

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

text: Capelin Herring Eulachon Finger Mullet Squid

characteristic: fish

text: Eulachon, Capelin, Finger Mullet, Herring, Squid

text: USA:CA:La Jolla

text: USA

characteristic: geographic location (country and/or sea)

text: Tursiops truncatus

characteristic: host scientific name

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: ECL

text: pounds

text: Recipient

characteristic: latitude

characteristic: location

characteristic: longitude

text: FMT history Aug 2019 - Dec 2-19 . Behaviorally doing well.

text: diazepam April 2019- 11/18/2019, ondansetron 6/2019-12/3/2019, Cerenia 3/30/2019- 11/06/2019, kaopectate 7/12-8/7/2019, ranitidine 5/20-5/25/2019, Simplicef (cefpodoxime) 7/30-8/6/2019, sucralfate 5/20-5/25/2019.

characteristic: meds

text: cetacean metagenome

characteristic: pair

text: One

characteristic: phase

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 2

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

text: Recipient

characteristic: status

text: dolphin test

text: Recipient

text: Recipient


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: AUS

text: not reported

characteristic: bloodwork

characteristic: collection date

text: Yes

text: USA

characteristic: country

text: small and medium rods and cocci, 1-5 epithelial cells/100x

text: dolphin FMT sample SD103993

text: TRUE

text: AUS

text: No

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

text: Capelin Herring Eulachon Threadfin Squid

text: USA:CA:La Jolla

text: USA

text: Tursiops truncatus

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: AUS

text: pounds

text: Donor

text: cetacean metagenome

characteristic: organism

text: One

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 2

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

text: Donor

characteristic: title

text: dolphin test

text: Donor

text: Donor


text: UCSDMI

text: public

text: CKT

text: not reported

text: Blood 2/4/2020- WBC 7.7 normal morph and differential, RBC indices WNL, ALP decreased (247), serum iron mildly decreased (187), otherwise normal bloodwork

text: Yes

text: USA

text: Abundant small and medium rods and cocci, fish spines

characteristic: cytology

characteristic: date

text: dolphin FMT sample SD103997

characteristic: description

text: TRUE

text: CKT

text: No

characteristic: duplicate

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

text: Capelin Herring Eulachon Threadfin

characteristic: fish

text: Capelin Herring Eulachon Eulachon Threadfin

text: USA:CA:La Jolla

text: USA

characteristic: geographic location (country and/or sea)

text: Tursiops truncatus

characteristic: host scientific name

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: CKT

text: pounds

text: Recipient

characteristic: latitude

characteristic: location

characteristic: longitude

text: Dec 2019 - weaned off of diazepam, bloodwork NSF. February 4, 2020- intermittently refusing to beach. Previous meds: ondansetron (1/8-2/17), NPG eye drops (2/20-2/24 and 5/16-5/21)

text: none currently. Previous meds: ondansetron (1/8-2/17), NPG eye drops (2/20-2/24 and 5/16-5/21)

characteristic: meds

text: cetacean metagenome

characteristic: pair

text: One

characteristic: phase

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 1

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

characteristic: sex

text: Recipient

text: dolphin test

text: Recipient

text: Recipient


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: KAN

text: not reported

text: Blood 1/14/2020 - WBC 8.9k, normal differential, stable iron (212), ALP (342)

characteristic: bloodwork

characteristic: collection date

text: Yes

text: USA

characteristic: country

text: small and medium size cocci, rare small rods

text: dolphin FMT sample SD103999

text: TRUE

text: KAN

text: No

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

text: Capelin Herring Eulachon Eulachon Threadfin Squid

text: USA:CA:La Jolla

text: USA

text: Tursiops truncatus

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: KAN

text: pounds

text: Donor

text: not reported

text: cetacean metagenome

characteristic: organism

text: One

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 2

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

text: Donor

characteristic: status

text: dolphin test

text: Donor

text: Donor


text: UCSDMI

text: public

text: CKT

text: not reported

text: Yes

text: USA

text: Small and medium rods and cocci, abundant fish spines

characteristic: cytology

characteristic: date

text: dolphin FMT sample SD104044

characteristic: description

text: TRUE

text: CKT

text: No

characteristic: duplicate

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

text: Capelin Herring Eulachon Threadfin

characteristic: fish

text: USA:CA:La Jolla

text: USA

characteristic: geographic location (country and/or sea)

text: Tursiops truncatus

characteristic: host scientific name

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: CKT

text: pounds

text: Recipient

characteristic: latitude

characteristic: location

characteristic: longitude

characteristic: meds

text: cetacean metagenome

characteristic: pair

text: One

characteristic: phase

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 2

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

text: Recipient

text: dolphin test

characteristic: title

text: Recipient

text: Recipient


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ZPR

text: not reported

text: Blood 1/14/2020 - WBC 8.4k, iron mildly decreased (169).

characteristic: bloodwork

characteristic: collection date

text: Yes

text: USA

characteristic: country

text: Abundant small and medim cocci, rare small rods, rare epithelial cells

text: dolphin FMT sample SD104064

text: TRUE

text: ZPR

text: No

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Recipient _3

text: Clinical Test

text: USA:CA:La Jolla

text: USA

text: Tursiops truncatus

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: ZPR

text: pounds

text: Recipient

text: Probiotic 10-20 9/23/2019-2/14/20, maropitant 12/31/19 - 1/14/20, ondansetron 12/31/19-1/14/20

text: cetacean metagenome

characteristic: organism

text: One

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 2

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

characteristic: sex

text: Recipient

text: dolphin test

text: Recipient

text: Recipient


text: UCSDMI

text: public

text: KNG

text: not reported

text: Blood 3/3/2020 - WBC 6.7k, eosinophilia (1.74k), iron mildly high 369, AST mildly high 401, otherwise NSF. Blood 6/10/20 - WNL, WBC 7.1k, iron mildly high 382.

text: Yes

text: USA

text: Abundant small and medium rods and cocci, abundant fish spines

characteristic: cytology

characteristic: date

text: dolphin FMT sample SD104067

characteristic: description

text: TRUE

text: KNG

text: No

characteristic: duplicate

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

characteristic: fish

text: USA:CA:La Jolla

text: USA

characteristic: geographic location (country and/or sea)

text: Tursiops truncatus

characteristic: host scientific name

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: KNG

text: pounds

text: Donor

characteristic: latitude

characteristic: location

characteristic: longitude

text: Doing well with no current medical issues.

text: Denamarin (s-adenosylmethionine + silybin). Previous: ketolorac eye drops 4/23-5/1/20, 7/10-7/15), NPG eye drops (4/23-5/1, 7/10-7/15/20).

characteristic: meds

text: cetacean metagenome

characteristic: pair

text: One

characteristic: phase

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 1

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

text: Donor

characteristic: status

text: dolphin test

text: Donor

text: Donor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COM

text: not reported

text: Blood 2/19/2020 - NSF, WBC 6.7k, normal differential. Normal iron (146), ALP(632)

characteristic: bloodwork

characteristic: collection date

text: Yes

text: USA

characteristic: country

text: Abundant small and medium cocci, small rods, abundant fish spines, rare epithelial cells

text: dolphin FMT sample SD104122

text: TRUE

text: COM

text: No

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

text: Capelin Herring Eulachon Squid Sardines

text: Capelin Herring Eulachon Eulachon Squid Sardines

text: USA:CA:La Jolla

text: USA

text: Tursiops truncatus

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: COM

text: pounds

text: Donor

text: not reported

text: cetacean metagenome

characteristic: organism

text: One

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 2

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

text: Donor

text: dolphin test

characteristic: title

text: Donor

text: Donor


text: UCSDMI

text: public

text: KNG

text: not reported

text: Yes

text: USA

text: missing?

characteristic: cytology

characteristic: date

text: dolphin FMT sample SD104156

characteristic: description

text: TRUE

text: KNG

text: No

characteristic: duplicate

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

text: Capelin Herring Eulachon Threadfin Squid

characteristic: fish

text: USA:CA:La Jolla

text: USA

characteristic: geographic location (country and/or sea)

text: Tursiops truncatus

characteristic: host scientific name

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: KNG

text: pounds

text: Donor

characteristic: latitude

characteristic: location

characteristic: longitude

characteristic: meds

text: cetacean metagenome

characteristic: pair

text: One

characteristic: phase

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 2

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

characteristic: sex

text: Donor

text: dolphin test

text: Donor

text: Donor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COH

text: not reported

text: Blood 4/22/2020 - mild mature neutrophilia (WBC 12.2, 9k neutrophils and 2% bands); normocytic, normochromic anemia PCV 32%.

characteristic: bloodwork

characteristic: collection date

text: No

text: USA

characteristic: country

text: Cocci +++, rare rods, rare Fat drops, fish spine +++

text: dolphin FMT sample SD105157

text: TRUE

text: COH

text: No

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

text: USA:CA:La Jolla

text: USA

text: Tursiops truncatus

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: COH

text: pounds

text: Recipient

text: 302N/ NAB

text: altrenogest (1/31/2020 - present). Previous meds: maropitant (1/4-2/14), Clavamox (4/24-5/7), omeprazole (1/28-2/4), ondansetron (1/24-2/14), tramadol (1/28-2/5).

text: cetacean metagenome

characteristic: organism

text: One

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 2

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: female

text: Recipient

characteristic: status

text: dolphin test

text: Recipient

text: Recipient


text: UCSDMI

text: public

text: CKT

text: not reported

text: Blood 2/4/2020- WBC 7.7 normal morph and differential, RBC indices WNL, ALP decreased (247), serum iron mildly decreased (187), otherwise normal bloodwork

text: Yes

text: USA

text: Fish spine ++, rare algae, cocci ++ rods +

characteristic: cytology

characteristic: date

text: dolphin FMT sample SD105189

characteristic: description

text: TRUE

text: CKT

text: No

characteristic: duplicate

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

text: Capelin Herring Eulachon Threadfin

characteristic: fish

text: Capelin Herring Eulachon Eulachon Threadfin

text: USA:CA:La Jolla

text: USA

characteristic: geographic location (country and/or sea)

text: Tursiops truncatus

characteristic: host scientific name

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: CKT

text: pounds

text: Recipient

characteristic: latitude

characteristic: location

characteristic: longitude

text: Dec 2019 - weaned off of diazepam, bloodwork NSF. February 4, 2020- intermittently refusing to beach. Previous meds: ondansetron (1/8-2/17), NPG eye drops (2/20-2/24 and 5/16-5/21)

text: none currently. Previous meds: ondansetron (1/8-2/17), NPG eye drops (2/20-2/24 and 5/16-5/21)

characteristic: meds

text: cetacean metagenome

characteristic: pair

text: One

characteristic: phase

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 3

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

text: Recipient

text: dolphin test

characteristic: title

text: Recipient

text: Recipient


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: KNG

text: not reported

characteristic: bloodwork

characteristic: collection date

text: Yes

text: USA

characteristic: country

text: fat drops ++, fish spine ++, cocci++, rare rods

text: dolphin FMT sample SD105197

text: TRUE

text: KNG

text: No

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

text: Capelin Herring Eulachon Eulachon Threadfin Squid

text: USA:CA:La Jolla

text: USA

text: Tursiops truncatus

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: KNG

text: pounds

text: Donor

text: cetacean metagenome

characteristic: organism

text: One

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 3

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

characteristic: sex

text: Donor

text: dolphin test

text: Donor

text: Donor


text: UCSDMI

text: public

text: MUU

text: not reported

text: Blood 6/22- WNL

text: No

text: USA

text: Diverse bacteria pop +++, coltridium ~ 3 per HPF, rare WBC

characteristic: cytology

characteristic: date

text: dolphin FMT sample SD105560

characteristic: description

text: TRUE

text: MUU

text: No

characteristic: duplicate

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

characteristic: fish

text: Eulachon, Capelin, Herring, Threadfin Herring, Squid

text: USA:CA:La Jolla

text: USA

characteristic: geographic location (country and/or sea)

text: Tursiops truncatus

characteristic: host scientific name

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: MUU

text: pounds

text: Donor

characteristic: latitude

characteristic: location

characteristic: longitude

text: None currently. Previous meds: NPG eye drops (9/1/2019-5/12/2020), tobramycin eye drops (12/6/19-3/17/20), omeprazole (2/10/2020-2/25/20), sucralfate (2/11-3/16/20)

characteristic: meds

text: cetacean metagenome

characteristic: pair

text: One

characteristic: phase

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 1

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: female

text: Donor

characteristic: status

text: dolphin test

text: Donor

text: Donor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: KAN

text: not reported

text: Blood 1/14/2020 - WBC 8.9k, normal differential, stable iron (212), ALP (342)

characteristic: bloodwork

characteristic: collection date

text: Yes

text: USA

characteristic: country

text: Cocci, rare small rods +, rare fish spine

text: dolphin FMT sample SD105563

text: TRUE

text: KAN

text: No

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

text: USA:CA:La Jolla

text: USA

text: Tursiops truncatus

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: KAN

text: pounds

text: Donor

text: CET oral rinse 3/30-4/15/20.

text: cetacean metagenome

characteristic: organism

text: One

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 3

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

text: Donor

text: dolphin test

characteristic: title

text: Donor

text: Donor


text: UCSDMI

text: public

text: ZPR

text: not reported

text: Blood 1/14/2020 - WBC 8.4k, iron mildly decreased (169).

text: Yes

text: USA

text: Fecal is mucoid with potenial mineral debris. cytology- Fat droplets ++++, samll cocci & rods++, mucus strains

characteristic: cytology

characteristic: date

text: dolphin FMT sample SD105567

characteristic: description

text: TRUE

text: ZPR

text: No

characteristic: duplicate

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Recipient _3

text: Clinical Test

characteristic: fish

text: USA:CA:La Jolla

text: USA

characteristic: geographic location (country and/or sea)

text: Tursiops truncatus

characteristic: host scientific name

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: ZPR

text: pounds

text: Recipient

characteristic: latitude

characteristic: location

characteristic: longitude

text: Probiotic 10-20 9/23/2019-2/14/20, maropitant 12/31/19 - 1/14/20, ondansetron 12/31/19-1/14/20

characteristic: meds

text: cetacean metagenome

characteristic: pair

text: One

characteristic: phase

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 3

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

characteristic: sex

text: Recipient

text: dolphin test

text: Recipient

text: Recipient


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: KON

text: not reported

text: Blood 2/14/2020- NSF, WBC 6.8k, normal morph and differential, iron stable (249), ALP stable (214)

characteristic: bloodwork

characteristic: collection date

text: Yes

text: USA

characteristic: country

text: Fish spine ++, cocci ++ rare rods +

text: dolphin FMT sample SD105573

text: TRUE

text: KON

text: No

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

text: Capelin Herring Eulachon Threadfin Squid

text: USA:CA:La Jolla

text: USA

text: Tursiops truncatus

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: KON

text: pounds

text: Donor

text: Mild hemorrhagic gastritis in February, on omeprazole and sucralfate, resolved.

text: sucalfrate (2/13-3/31/20), omeprazole (2/14-4/8/20)

text: cetacean metagenome

characteristic: organism

text: One

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 3

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: female

text: Donor

characteristic: status

text: dolphin test

text: Donor

text: Donor


text: UCSDMI

text: public

text: COM

text: not reported

text: Blood 2/19/2020 - NSF, WBC 6.7k, normal differential. Normal iron (146), ALP(632)

text: Yes

text: USA

text: Fat droplets ++, cocci +, fish spine ++

characteristic: cytology

characteristic: date

text: dolphin FMT sample SD105576

characteristic: description

text: TRUE

text: COM

text: No

characteristic: duplicate

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

text: Capelin Herring Eulachon Squid Sardines

characteristic: fish

text: Capelin Herring Eulachon Eulachon Squid Sardines

text: USA:CA:La Jolla

text: USA

characteristic: geographic location (country and/or sea)

text: Tursiops truncatus

characteristic: host scientific name

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: COM

text: pounds

text: Donor

characteristic: latitude

characteristic: location

characteristic: longitude

text: tramadol (5/12/20-5/16/20), NPG eye drops (5/12/20-5/16/20)

characteristic: meds

text: cetacean metagenome

characteristic: pair

text: One

characteristic: phase

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 3

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

text: Donor

characteristic: title

text: dolphin test

text: Donor

text: Donor


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ECL

text: Performed 4/16- present. See excel sheet.

text: Blood 3/11/2020 - fairly unremarkable. WBC 7.8k, normal differential, 1% bands; iron 185, ALP 753

characteristic: bloodwork

characteristic: collection date

text: Yes

text: USA

characteristic: country

text: Low Bacteria pop, very rare rods

text: dolphin FMT sample SD105579

text: TRUE

text: ECL

text: No

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

text: Capelin Herring Eulachon Finger Mullet Squid

text: Eulachon, Capelin, Finger Mullet, Herring, Squid

text: USA:CA:La Jolla

text: USA

text: Tursiops truncatus

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: ECL

text: pounds

text: Recipient

text: FMT history Aug 2019 - Dec 2-19 . Behaviorally doing well.

text: diazepam April 2019- 11/18/2019, ondansetron 6/2019-12/3/2019, Cerenia 3/30/2019- 11/06/2019, kaopectate 7/12-8/7/2019, ranitidine 5/20-5/25/2019, Simplicef (cefpodoxime) 7/30-8/6/2019, sucralfate 5/20-5/25/2019.

text: cetacean metagenome

characteristic: organism

text: One

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 3

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

characteristic: sex

text: Recipient

text: dolphin test

text: Recipient

text: Recipient


text: UCSDMI

text: public

text: COL

text: not reported

text: Blood 11/21/19- NSF, WBC 9.6k, iron 145, ALP 376. Blood June 2020 WNL. Blood July 2020 WNL.

text: Yes

text: USA

text: rods + cocci + fish spine ++

characteristic: cytology

characteristic: date

text: dolphin FMT sample SD105588

characteristic: description

text: TRUE

text: COL

text: No

characteristic: duplicate

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Animal (saline)

text: Animal distal gut (saline)

text: urban biome

text: research facility

text: fecal material

text: host-associated

text: Clinical Test

characteristic: fish

text: Capelin Herring Eulachon Eulachon Threadfin Squid

text: USA:CA:La Jolla

text: USA

characteristic: geographic location (country and/or sea)

text: Tursiops truncatus

characteristic: host scientific name

text: years

text: UBERON:feces

text: UBERON:feces

text: UBERON:feces

text: bottle-nosed dolphin

text: adult

text: COL

text: pounds

text: Donor

characteristic: latitude

characteristic: location

characteristic: longitude

characteristic: meds

text: cetacean metagenome

characteristic: pair

text: One

characteristic: phase

text: UCSD

text: FALSE

text: dolphin fecal material

text: Baseline 3

text: Baseline

text: dolphin fecal material

text: cetacean metagenome

text: male

text: Donor

characteristic: status

text: dolphin test

text: Donor

text: Donor