status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Oxford

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOT PROVIDED

characteristic: barcoding center

text: COPO

characteristic: broker name

text: Liam Crowley

characteristic: collected by

text: University of Oxford

characteristic: collecting institution

characteristic: collection date

unit: m

characteristic: elevation

text: United Kingdom

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Berkshire | Wytham woods

characteristic: geographic location (region and locality)

text: Woodland

characteristic: habitat

text: Liam Crowley

characteristic: identified by

text: University of Oxford

text: adult

characteristic: lifestage

text: Stylops aterrimus

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

text: Stylops aterrimus

text: FEMALE

characteristic: sex

characteristic: specimen id

text: 06e2c694-cb07-452d-883c-182e3c5941ae-DTOL-specimen

characteristic: title

characteristic: tolid

type: derived from


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Oxford

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOT PROVIDED

characteristic: barcoding center

text: COPO

characteristic: broker name

text: Liam Crowley

characteristic: collected by

text: University of Oxford

characteristic: collecting institution

text: United Kingdom

text: Berkshire | Wytham woods

text: Woodland

text: Liam Crowley

text: University of Oxford

text: adult

text: Stylops aterrimus

text: WHOLE ORGANISM

text: DTOL

text: Stylops aterrimus

text: FEMALE

text: 173c556a-3159-45b6-a8db-959799c10904-DTOL-specimen


text: University of Oxford

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: NOT PROVIDED

text: COPO

text: Liam Crowley

text: University of Oxford

characteristic: collection date

characteristic: elevation

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Berkshire | Wytham woods

characteristic: geographic location (region and locality)

text: Woodland

characteristic: habitat

text: Liam Crowley

characteristic: identified by

text: University of Oxford

text: pupa

characteristic: lifestage

text: Stylops aterrimus

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

text: Stylops aterrimus

text: MALE

characteristic: sex

characteristic: specimen id

text: 647ca673-20db-4040-b8c2-86826f0dd975-DTOL-specimen

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Oxford

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOT PROVIDED

characteristic: barcoding center

text: COPO

characteristic: broker name

text: Liam Crowley

characteristic: collected by

text: University of Oxford

text: United Kingdom

text: Oxfordshire | Dry Sandford Pit

text: Scrub

text: Liam Crowley

text: University of Oxford

text: adult

text: Stylops aterrimus

text: WHOLE ORGANISM

text: DTOL

text: Stylops aterrimus

text: FEMALE

text: b1f383a6-8b7c-4f16-a7e3-8961dcc6f312-DTOL-specimen

characteristic: tolid


text: University of Oxford

text: EarlhamInstitute

text: public

text: NOT PROVIDED

text: COPO

text: Liam Crowley

text: University of Oxford

characteristic: collecting institution

characteristic: collection date

characteristic: elevation

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Berkshire | Wytham woods

characteristic: geographic location (region and locality)

text: Woodland

characteristic: habitat

text: Liam Crowley

text: University of Oxford

text: adult

characteristic: lifestage

text: Stylops aterrimus

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

characteristic: sample same as

text: Stylops aterrimus

text: FEMALE

characteristic: sex

text: NOT APPLICABLE

text: d4ca2c2f-ad7b-4d05-9aeb-37610aff4ea6-dtol


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Oxford

characteristic: GAL

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOT PROVIDED

characteristic: barcoding center

text: COPO

characteristic: broker name

text: Liam Crowley

text: University of Oxford

text: United Kingdom

text: Berkshire | Wytham woods

text: Woodland

text: Liam Crowley

text: University of Oxford

text: adult

text: Stylops aterrimus

text: WHOLE ORGANISM

text: DTOL

text: Stylops aterrimus

text: FEMALE

text: NOT APPLICABLE

text: 46e93524-5659-4fd1-bf1e-45a6c8b98351-dtol

characteristic: title


text: University of Oxford

text: EarlhamInstitute

text: public

text: NOT PROVIDED

text: COPO

text: Liam Crowley

text: University of Oxford

characteristic: collecting institution

characteristic: collection date

characteristic: elevation

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Berkshire | Wytham woods

characteristic: geographic location (region and locality)

text: Woodland

characteristic: habitat

text: Liam Crowley

text: University of Oxford

text: pupa

characteristic: lifestage

text: Stylops aterrimus

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

text: Stylops aterrimus

text: MALE

text: NOT APPLICABLE

text: 318ee498-2a90-4d05-b790-2839c783addb-dtol

characteristic: tolid


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Oxford

characteristic: GAL

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOT PROVIDED

text: COPO

text: Liam Crowley

text: University of Oxford

text: United Kingdom

text: Oxfordshire | Dry Sandford Pit

text: Scrub

text: Liam Crowley

text: University of Oxford

text: adult

text: Stylops aterrimus

text: WHOLE ORGANISM

text: DTOL

characteristic: sample same as

text: Stylops aterrimus

text: FEMALE

characteristic: sex

text: NOT APPLICABLE

text: fb05c947-58d5-469a-9bd3-bcf87cfda482-dtol


text: CAM

text: public

characteristic: collection date

text: Raised on Passiflora biflora

characteristic: description

text: Early larva

characteristic: dev stage

text: Heliconius erato demophoon

characteristic: organism

text: Heliconius erato demophoon

text: Whole body

characteristic: tissue type

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: CAM

text: public

text: Raised on Passiflora biflora

text: Late larva

text: Heliconius erato demophoon

text: Heliconius erato demophoon

text: Whole body


characteristic: External Id

text: CAM

characteristic: INSDC center name

text: public

text: Raised on Passiflora biflora

text: Pupa

text: Heliconius erato demophoon

text: Heliconius erato demophoon

text: Whole body


text: CAM

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Rasied on Passiflora auriculata

text: Late larva

text: Heliconius erato demophoon

text: Heliconius erato demophoon

text: Whole body


text: CAM

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Rasied on Passiflora auriculata

text: Pupa

text: Heliconius erato demophoon

text: Heliconius erato demophoon

text: Whole body


text: CAM

text: public

characteristic: Submitter Id

text: Raised on Passiflora biflora painted with P.auriculata extract

text: Late larva

text: Heliconius erato demophoon

text: Heliconius erato demophoon

text: Whole body


text: CAM

text: public

text: Pupa

text: Heliconius erato demophoon

text: Heliconius erato demophoon

text: Whole body


text: public

tag: Namespace:MMPU - Molecular Medicine Partnership Unit

unit: week

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: Protocols: Mice have been euthanized via CO2 inhalation. Hearts have been explanted, grinded in liquid nitrogen and frozen at -80C RNA has been obtained via the qiagen miRNAeasy mini kit with in column DNAse digestion. mRNA-Seq libraries were created according to the standard Illumina TruSeq protocol.

text: Hereditary hemochromatosis type 2

characteristic: disease

text: hepcidin knockout (Hamp-ko)

characteristic: genotype

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: Heart

characteristic: organism part

text: Mus musculus

text: Female

characteristic: sex

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: MMPU - Molecular Medicine Partnership Unit

text: public

text: ArrayExpress

text: house mouse

characteristic: description

text: Hereditary hemochromatosis type 2

text: hepcidin knockout (Hamp-ko)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Heart

text: Mus musculus

text: Female

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: house mouse

text: wild type

text: not applicable

text: Mus musculus

text: Mus musculus

text: Heart

text: Mus musculus

text: Female


text: public

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: house mouse

characteristic: common name

text: Hereditary hemochromatosis type 4

characteristic: disease

characteristic: genotype

text: not applicable

text: Mus musculus

text: Mus musculus

text: Heart.

text: Mus musculus

text: Female


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: ArrayExpress

text: house mouse

text: Hereditary hemochromatosis type 4

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: Heart

characteristic: organism part

text: Mus musculus

text: Female

characteristic: sex

characteristic: strain


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF CAMBRIDGE

characteristic: INSDC center name

text: public

tag: Namespace:UNIVERSITY OF CAMBRIDGE

text: house mouse

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Group 2 innate lymphoid cells prevent endotoxin-induced fetal demise

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

unit: psu

characteristic: Salinity

tag: Namespace:COLLEGE OF ENVIRONMENTAL SCIENCES AND ENGINEERING, OCEAN UNIVERSITY OF CHINA

characteristic: Submitter Id

characteristic: collection date

text: uncultured eukaryote

characteristic: depth

text: Diel sampling of plankton collected by net tow at C6 station of Taiwan strait.

characteristic: description

text: marine

characteristic: environment (biome)

text: pelagic

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Yes

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: uncultured eukaryote

text: MPL18ScomV4 F1:CAGCASCYGCGGTAATTC; MPL18ScomV4 R3:CTWACTTTCGTTCTTGATYAA

characteristic: pcr primers

text: 200um-mesh plankton net tow

characteristic: sampling method

text: uncultured eukaryote

characteristic: size fraction

characteristic: target gene

characteristic: target subfragment

characteristic: temperature


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: COLLEGE OF ENVIRONMENTAL SCIENCES AND ENGINEERING, OCEAN UNIVERSITY OF CHINA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Salinity

text: uncultured eukaryote

characteristic: common name

text: marine

text: pelagic

text: water

text: Yes

text: China

text: uncultured eukaryote

characteristic: organism

text: 200um-mesh plankton net tow

text: uncultured eukaryote

characteristic: title


text: public

characteristic: Submitter Id

characteristic: collection date

text: uncultured eukaryote

characteristic: depth

text: Diel sampling of plankton collected by net tow at C9 station of Taiwan strait.

characteristic: description

text: marine

characteristic: environment (biome)

text: pelagic

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Yes

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: uncultured eukaryote

characteristic: pcr primers

text: 200um-mesh plankton net tow

characteristic: sampling method

text: uncultured eukaryote

characteristic: size fraction


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Salinity

text: uncultured eukaryote

text: Plankton collected by seawater filtration at station A4 of Northwest Pacific Ocean

text: marine

text: pelagic

text: water

text: Yes

text: Pacific Ocean

text: uncultured eukaryote

text: MPL18ScomV4_F1:CAGCASCYGCGGTAATTC; MPL18ScomV4_R3:CTWACTTTCGTTCTTGATYAA

text: 0.45um and 5um Polycarbonate membrane filter

text: uncultured eukaryote

characteristic: target gene

characteristic: target subfragment

characteristic: temperature


text: public

characteristic: Submitter Id

characteristic: collection date

text: uncultured eukaryote

characteristic: common name

characteristic: depth

text: Plankton collected by seawater filtration at station A5 of Northwest Pacific Ocean

characteristic: description

text: marine

characteristic: environment (biome)

text: pelagic

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Yes

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: uncultured eukaryote

characteristic: organism

text: uncultured eukaryote

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Salinity

text: uncultured eukaryote

text: Plankton collected by seawater filtration at station A6 of Northwest Pacific Ocean

text: marine

text: pelagic

text: water

text: Yes

text: Pacific Ocean

text: uncultured eukaryote

characteristic: pcr primers

characteristic: sampling method

text: uncultured eukaryote

characteristic: size fraction


text: public

characteristic: Submitter Id

characteristic: collection date

text: uncultured eukaryote

characteristic: common name

characteristic: depth

text: Plankton collected by seawater filtration at station A8 of Northwest Pacific Ocean

characteristic: description

text: marine

characteristic: environment (biome)

text: pelagic

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Yes

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: uncultured eukaryote

text: uncultured eukaryote

characteristic: target gene

characteristic: target subfragment

characteristic: temperature


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Salinity

text: uncultured eukaryote

text: Plankton collected by seawater filtration at station B1 of Northwest Pacific Ocean

text: marine

text: pelagic

text: water

text: Yes

text: Pacific Ocean

characteristic: geographic location (longitude)

text: uncultured eukaryote

characteristic: organism

text: uncultured eukaryote

characteristic: title


text: public

characteristic: Submitter Id

characteristic: collection date

text: uncultured eukaryote

characteristic: common name

characteristic: depth

text: Plankton collected by seawater filtration at station B3 of Northwest Pacific Ocean

characteristic: description

text: marine

characteristic: environment (biome)

text: pelagic

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Yes

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: uncultured eukaryote

characteristic: pcr primers

characteristic: sampling method

text: uncultured eukaryote

characteristic: size fraction


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Salinity

text: uncultured eukaryote

text: Plankton collected by seawater filtration at station B4 of Northwest Pacific Ocean

text: marine

text: pelagic

text: water

text: Yes

text: Pacific Ocean

text: uncultured eukaryote

text: uncultured eukaryote

characteristic: target gene

characteristic: target subfragment

characteristic: temperature


text: public

characteristic: Submitter Id

characteristic: collection date

text: uncultured eukaryote

characteristic: common name

characteristic: depth

text: Plankton collected by seawater filtration at station B5 of Northwest Pacific Ocean

characteristic: description

text: marine

characteristic: environment (biome)

text: pelagic

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Yes

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: uncultured eukaryote

characteristic: organism

text: uncultured eukaryote

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Salinity

text: uncultured eukaryote

text: Plankton collected by seawater filtration at station A2 of Northwest Pacific Ocean

text: marine

text: pelagic

text: water

text: Yes

text: Pacific Ocean

text: uncultured eukaryote

characteristic: pcr primers

characteristic: sampling method

text: uncultured eukaryote

characteristic: size fraction


text: public

characteristic: Submitter Id

characteristic: collection date

text: uncultured eukaryote

characteristic: common name

characteristic: depth

text: Plankton collected by seawater filtration at station A7 of Northwest Pacific Ocean

characteristic: description

text: marine

characteristic: environment (biome)

text: pelagic

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Yes

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: uncultured eukaryote

text: uncultured eukaryote

characteristic: target gene

characteristic: target subfragment

characteristic: temperature


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Salinity

text: uncultured eukaryote

text: Plankton collected by seawater filtration at station B6 of Northwest Pacific Ocean

text: marine

text: pelagic

text: water

text: Yes

text: Pacific Ocean

characteristic: geographic location (longitude)

text: uncultured eukaryote

characteristic: organism

text: uncultured eukaryote

characteristic: title


text: public

characteristic: Submitter Id

characteristic: collection date

text: uncultured eukaryote

characteristic: common name

characteristic: depth

text: Plankton collected by seawater filtration at station B7 of Northwest Pacific Ocean

characteristic: description

text: marine

characteristic: environment (biome)

text: pelagic

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: Yes

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: uncultured eukaryote

characteristic: pcr primers

characteristic: sampling method

text: uncultured eukaryote

characteristic: size fraction


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EAWAG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Shower hoses

text: Plumbing systems

text: Water

text: Switzerland

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

text: metagenome

characteristic: investigation type

text: microbial mat/biofilm

characteristic: microbial mat/biofilm environmental package

text: biofilm metagenome

text: Correlations between shower hoses biofilm microbiome and its functions and the presence of Legionella spp.

characteristic: project name

text: biofilm metagenome

text: Illumina

characteristic: sequencing method

text: Shower hoses biofilm


text: University of Zurich

text: public

tag: Namespace:University of Zurich

characteristic: Submitter Id

characteristic: collection date

text: blood

characteristic: description

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: clinical sample

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: AmpC study

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Zurich

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: clinical sample

text: Switzerland

text: not collected

text: Homo sapiens

text: clinical sample

text: Escherichia coli

text: Escherichia coli

text: AmpC study


text: University of Zurich

text: public

characteristic: Submitter Id

characteristic: collection date

text: urine

characteristic: description

text: Switzerland

text: not collected

text: Homo sapiens

text: clinical sample

text: Escherichia coli

text: Escherichia coli

text: AmpC study


text: University of Zurich

text: public

text: wound swab

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: clinical sample

text: Escherichia coli

text: Escherichia coli

text: AmpC study


text: University of Zurich

text: public

text: respiratory sample

text: Switzerland

text: not collected

text: Homo sapiens

characteristic: isolate

text: clinical sample

characteristic: isolation source

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: AmpC study


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: University of Zurich

text: public

text: deep wound swab

text: Switzerland

text: not collected

text: Homo sapiens

text: clinical sample

text: Escherichia coli

text: Escherichia coli

text: AmpC study

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Zurich

characteristic: INSDC center name

text: public

text: abscess

text: Switzerland

text: not collected

text: Homo sapiens

text: clinical sample

text: Escherichia coli

text: Escherichia coli

text: AmpC study


text: University of Zurich

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: rectal swab

text: Switzerland

text: not collected

text: Homo sapiens

text: clinical sample

text: Escherichia coli

text: Escherichia coli

text: AmpC study


text: University of Zurich

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: clinical sample

text: Switzerland

text: not collected

text: Homo sapiens

text: clinical sample

text: Klebsiella oxytoca

text: Klebsiella oxytoca

text: AmpC study


text: University of Zurich

text: public

text: urine

characteristic: description

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: host health state

text: Homo sapiens

text: clinical sample

text: Klebsiella oxytoca

text: Klebsiella oxytoca

text: AmpC study


text: University of Zurich

text: public

text: blood

text: Switzerland

text: not collected

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: clinical sample

characteristic: isolation source

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: AmpC study


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: University of Zurich

text: public

text: clinical sample

text: Switzerland

text: not collected

text: Homo sapiens

text: clinical sample

text: Klebsiella pneumoniae

characteristic: organism

text: Klebsiella pneumoniae

text: AmpC study


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Zurich

text: public

text: respiratory sample

text: Switzerland

text: not collected

text: Homo sapiens

text: clinical sample

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: AmpC study

characteristic: title


text: University of Zurich

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: abscess

text: Switzerland

text: not collected

text: Homo sapiens

text: clinical sample

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: AmpC study


text: University of Zurich

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: deep wound swab

text: Switzerland

text: not collected

text: Homo sapiens

text: clinical sample

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: AmpC study


text: University of Zurich

text: public

characteristic: collection date

text: urine

characteristic: description

text: Switzerland

characteristic: geographic location (country and/or sea)

text: not collected

text: Homo sapiens

text: clinical sample

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: AmpC study


text: University of Zurich

text: public

text: rectal swab

text: Switzerland

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: clinical sample

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: AmpC study


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: University of Zurich

text: public

text: clinical sample

text: Switzerland

text: not collected

text: Homo sapiens

text: clinical sample

characteristic: isolation source

text: Proteus mirabilis

text: Proteus mirabilis

text: AmpC study


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: University of Zurich

text: public

text: drainage fluid

text: Switzerland

text: not collected

text: Homo sapiens

text: clinical sample

text: Proteus mirabilis

characteristic: organism

text: Proteus mirabilis

text: AmpC study


text: University of Zurich

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: urine

text: Switzerland

text: not collected

text: Homo sapiens

text: clinical sample

text: Proteus mirabilis

text: Proteus mirabilis

text: AmpC study

characteristic: title


text: Moraxella_catarrhalis (BBH18)

characteristic: ArrayExpress-SPECIES

text: Unknown

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Moraxella_catarrhalis (BBH18)

characteristic: common name

text: Moraxella catarrhalis

text: Moraxella catarrhalis


text: Haemophilus influenzae

text: Unknown

text: SC

text: public

characteristic: Submitter Id

text: Haemophilus influenzae

text: Haemophilus influenzae

text: Haemophilus influenzae


text: MSB-SCUT

text: public

text: baker's yeast

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae


characteristic: ENA first public

text: UMR 261

text: public

tag: Namespace:UMR 261

text: CARESP

characteristic: collecting institution

characteristic: collection date

text: Didier Ekouevi

characteristic: collector name

text: HPV from patient 01, cervical

characteristic: description

text: Togo

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host subject id

text: HPV

text: cervical swab

characteristic: isolation source host-associated

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UMR 261

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: CARESP

text: Didier Ekouevi

text: HPV from patient 01, anal

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

characteristic: isolate

text: anal swab

text: Human papillomavirus

characteristic: organism

text: Human papillomavirus

text: HPV

characteristic: title


characteristic: ENA first public

text: UMR 261

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: CARESP

characteristic: collecting institution

characteristic: collection date

text: Didier Ekouevi

text: HPV from patient 02, cervical

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

text: cervical swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


text: UMR 261

text: public

text: CARESP

text: Didier Ekouevi

characteristic: collector name

text: HPV from patient 02, anal

characteristic: description

text: Togo

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: female

text: HPV

text: anal swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UMR 261

characteristic: INSDC center name

text: public

text: CARESP

text: Didier Ekouevi

text: HPV from patient 03, cervical

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

text: HPV

text: cervical swab

characteristic: isolation source host-associated

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA first public

text: UMR 261

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: CARESP

text: Didier Ekouevi

text: HPV from patient 03, anal

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

characteristic: isolate

text: anal swab

text: Human papillomavirus

characteristic: organism

text: Human papillomavirus

text: HPV

characteristic: title


text: UMR 261

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: CARESP

characteristic: collecting institution

characteristic: collection date

text: Didier Ekouevi

characteristic: collector name

text: HPV from patient 04, cervical

characteristic: description

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

text: cervical swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UMR 261

text: public

text: CARESP

text: Didier Ekouevi

text: HPV from patient 04, anal

text: Togo

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: female

text: HPV

text: anal swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA first public

text: UMR 261

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: CARESP

text: Didier Ekouevi

text: HPV from patient 05, cervical

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

text: HPV

text: cervical swab

characteristic: isolation source host-associated

text: Human papillomavirus

text: Human papillomavirus

text: HPV


text: UMR 261

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: CARESP

text: Didier Ekouevi

text: HPV from patient 05, anal

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

characteristic: isolate

text: anal swab

text: Human papillomavirus

characteristic: organism

text: Human papillomavirus

text: HPV

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UMR 261

text: public

text: CARESP

characteristic: collecting institution

characteristic: collection date

text: Didier Ekouevi

characteristic: collector name

text: HPV from patient 06, cervical

characteristic: description

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

text: cervical swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA first public

text: UMR 261

characteristic: INSDC center name

text: public

text: CARESP

text: Didier Ekouevi

text: HPV from patient 06, anal

text: Togo

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: female

text: HPV

text: anal swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


text: UMR 261

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: CARESP

text: Didier Ekouevi

text: HPV from patient 07, cervical

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

text: HPV

text: cervical swab

characteristic: isolation source host-associated

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UMR 261

text: public

characteristic: Submitter Id

text: CARESP

text: Didier Ekouevi

text: HPV from patient 07, anal

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

characteristic: isolate

text: anal swab

text: Human papillomavirus

characteristic: organism

text: Human papillomavirus

text: HPV

characteristic: title


characteristic: ENA first public

text: UMR 261

characteristic: INSDC center name

text: public

text: CARESP

characteristic: collecting institution

characteristic: collection date

text: Didier Ekouevi

characteristic: collector name

text: HPV from patient 08, cervical

characteristic: description

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

text: cervical swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


text: UMR 261

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: CARESP

text: Didier Ekouevi

text: HPV from patient 08, anal

text: Togo

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: female

text: HPV

text: anal swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UMR 261

text: public

characteristic: SRA accession

text: CARESP

text: Didier Ekouevi

text: HPV from patient 09, cervical

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

text: HPV

text: cervical swab

characteristic: isolation source host-associated

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA first public

text: UMR 261

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: CARESP

text: Didier Ekouevi

text: HPV from patient 09, anal

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

characteristic: isolate

text: anal swab

text: Human papillomavirus

characteristic: organism

text: Human papillomavirus

text: HPV

characteristic: title


text: UMR 261

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: CARESP

characteristic: collecting institution

characteristic: collection date

text: Didier Ekouevi

characteristic: collector name

text: HPV from patient 10, cervical

characteristic: description

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

text: cervical swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UMR 261

text: public

text: CARESP

text: Didier Ekouevi

text: HPV from patient 10, anal

text: Togo

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: female

text: HPV

text: anal swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA first public

text: UMR 261

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: CARESP

text: Didier Ekouevi

text: HPV from patient 11, cervical

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

text: HPV

text: cervical swab

characteristic: isolation source host-associated

text: Human papillomavirus

text: Human papillomavirus

text: HPV


text: UMR 261

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: CARESP

text: Didier Ekouevi

text: HPV from patient 11, anal

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

characteristic: isolate

text: anal swab

text: Human papillomavirus

characteristic: organism

text: Human papillomavirus

text: HPV

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UMR 261

text: public

text: CARESP

characteristic: collecting institution

characteristic: collection date

text: Didier Ekouevi

characteristic: collector name

text: HPV from patient 12, cervical

characteristic: description

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

text: cervical swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA first public

text: UMR 261

characteristic: INSDC center name

text: public

text: CARESP

text: Didier Ekouevi

text: HPV from patient 12, anal

text: Togo

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: female

text: HPV

text: anal swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


text: UMR 261

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: CARESP

text: Didier Ekouevi

text: HPV from patient 13, cervical

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

text: HPV

text: cervical swab

characteristic: isolation source host-associated

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UMR 261

text: public

characteristic: Submitter Id

text: CARESP

text: Didier Ekouevi

text: HPV from patient 13, anal

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

characteristic: isolate

text: anal swab

text: Human papillomavirus

characteristic: organism

text: Human papillomavirus

text: HPV

characteristic: title


characteristic: ENA first public

text: UMR 261

characteristic: INSDC center name

text: public

text: CARESP

characteristic: collecting institution

characteristic: collection date

text: Didier Ekouevi

characteristic: collector name

text: HPV from patient 14, cervical

characteristic: description

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

text: cervical swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


text: UMR 261

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: CARESP

text: Didier Ekouevi

text: HPV from patient 14, anal

text: Togo

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: female

text: HPV

text: anal swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UMR 261

text: public

characteristic: SRA accession

text: CARESP

text: Didier Ekouevi

text: HPV from patient 15, cervical

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

text: HPV

text: cervical swab

characteristic: isolation source host-associated

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA first public

text: UMR 261

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: CARESP

text: Didier Ekouevi

text: HPV from patient 15, anal

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

characteristic: isolate

text: anal swab

text: Human papillomavirus

characteristic: organism

text: Human papillomavirus

text: HPV

characteristic: title


text: UMR 261

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: CARESP

characteristic: collecting institution

characteristic: collection date

text: Didier Ekouevi

characteristic: collector name

text: HPV from patient 16, cervical

characteristic: description

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

text: cervical swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UMR 261

text: public

text: CARESP

text: Didier Ekouevi

text: HPV from patient 16, anal

text: Togo

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: female

text: HPV

text: anal swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA first public

text: UMR 261

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: CARESP

text: Didier Ekouevi

text: HPV from patient 17, cervical

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

text: HPV

text: cervical swab

characteristic: isolation source host-associated

text: Human papillomavirus

text: Human papillomavirus

text: HPV


text: UMR 261

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: CARESP

text: Didier Ekouevi

text: HPV from patient 17, anal

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

characteristic: isolate

text: anal swab

text: Human papillomavirus

characteristic: organism

text: Human papillomavirus

text: HPV

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UMR 261

text: public

text: CARESP

characteristic: collecting institution

characteristic: collection date

text: Didier Ekouevi

characteristic: collector name

text: HPV from patient 18, cervical

characteristic: description

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

text: cervical swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA first public

text: UMR 261

characteristic: INSDC center name

text: public

text: CARESP

text: Didier Ekouevi

text: HPV from patient 18, anal

text: Togo

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: female

text: HPV

text: anal swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


text: UMR 261

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: CARESP

text: Didier Ekouevi

text: HPV from patient 19, cervical

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

text: HPV

text: cervical swab

characteristic: isolation source host-associated

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UMR 261

text: public

characteristic: Submitter Id

text: CARESP

text: Didier Ekouevi

text: HPV from patient 19, anal

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

characteristic: isolate

text: anal swab

text: Human papillomavirus

characteristic: organism

text: Human papillomavirus

text: HPV

characteristic: title


characteristic: ENA first public

text: UMR 261

characteristic: INSDC center name

text: public

text: CARESP

characteristic: collecting institution

characteristic: collection date

text: Didier Ekouevi

characteristic: collector name

text: HPV from patient 20, cervical

characteristic: description

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

text: cervical swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


text: UMR 261

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: CARESP

text: Didier Ekouevi

text: HPV from patient 20, anal

text: Togo

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: female

text: HPV

text: anal swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UMR 261

text: public

characteristic: SRA accession

text: CARESP

text: Didier Ekouevi

text: HPV from patient 21, cervical

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

text: HPV

text: cervical swab

characteristic: isolation source host-associated

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA first public

text: UMR 261

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: CARESP

text: Didier Ekouevi

text: HPV from patient 21, anal

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

characteristic: isolate

text: anal swab

text: Human papillomavirus

characteristic: organism

text: Human papillomavirus

text: HPV

characteristic: title


text: UMR 261

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: CARESP

characteristic: collecting institution

characteristic: collection date

text: Didier Ekouevi

characteristic: collector name

text: HPV from patient 22, cervical

characteristic: description

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

text: cervical swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UMR 261

text: public

text: CARESP

text: Didier Ekouevi

text: HPV from patient 22, anal

text: Togo

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: female

text: HPV

text: anal swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA first public

text: UMR 261

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: CARESP

text: Didier Ekouevi

text: HPV from patient 23, cervical

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

text: HPV

text: cervical swab

characteristic: isolation source host-associated

text: Human papillomavirus

text: Human papillomavirus

text: HPV


text: UMR 261

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: CARESP

text: Didier Ekouevi

text: HPV from patient 23, anal

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

characteristic: isolate

text: anal swab

text: Human papillomavirus

characteristic: organism

text: Human papillomavirus

text: HPV

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UMR 261

text: public

text: CARESP

characteristic: collecting institution

characteristic: collection date

text: Didier Ekouevi

characteristic: collector name

text: HPV from patient 24, cervical

characteristic: description

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

text: cervical swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA first public

text: UMR 261

characteristic: INSDC center name

text: public

text: CARESP

text: Didier Ekouevi

text: HPV from patient 24, anal

text: Togo

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: female

text: HPV

text: anal swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


text: UMR 261

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: CARESP

text: Didier Ekouevi

text: HPV from patient 25, cervical

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

text: HPV

text: cervical swab

characteristic: isolation source host-associated

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UMR 261

text: public

characteristic: Submitter Id

text: CARESP

text: Didier Ekouevi

text: HPV from patient 25, anal

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

characteristic: isolate

text: anal swab

text: Human papillomavirus

characteristic: organism

text: Human papillomavirus

text: HPV

characteristic: title


characteristic: ENA first public

text: UMR 261

characteristic: INSDC center name

text: public

text: CARESP

characteristic: collecting institution

characteristic: collection date

text: Didier Ekouevi

characteristic: collector name

text: HPV from patient 26, cervical

characteristic: description

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

text: cervical swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


text: UMR 261

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: CARESP

text: Didier Ekouevi

text: HPV from patient 26, anal

text: Togo

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: female

text: HPV

text: anal swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UMR 261

text: public

characteristic: SRA accession

text: CARESP

text: Didier Ekouevi

text: HPV from patient 27, cervical

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

text: HPV

text: cervical swab

characteristic: isolation source host-associated

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA first public

text: UMR 261

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: CARESP

text: Didier Ekouevi

text: HPV from patient 27, anal

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

characteristic: isolate

text: anal swab

text: Human papillomavirus

characteristic: organism

text: Human papillomavirus

text: HPV

characteristic: title


text: UMR 261

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: CARESP

characteristic: collecting institution

characteristic: collection date

text: Didier Ekouevi

characteristic: collector name

text: HPV from patient 28, cervical

characteristic: description

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

text: cervical swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UMR 261

text: public

text: CARESP

text: Didier Ekouevi

text: HPV from patient 28, anal

text: Togo

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: female

text: HPV

text: anal swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA first public

text: UMR 261

characteristic: INSDC center name

text: public

characteristic: SRA accession

text: CARESP

text: Didier Ekouevi

text: HPV from patient 29, cervical

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

characteristic: host sex

characteristic: host subject id

text: HPV

text: cervical swab

characteristic: isolation source host-associated

text: Human papillomavirus

text: Human papillomavirus

text: HPV


text: UMR 261

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: CARESP

text: Didier Ekouevi

text: HPV from patient 29, anal

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

characteristic: isolate

text: anal swab

text: Human papillomavirus

characteristic: organism

text: Human papillomavirus

text: HPV

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UMR 261

text: public

text: CARESP

characteristic: collecting institution

characteristic: collection date

text: Didier Ekouevi

characteristic: collector name

text: HPV from patient 30, cervical

characteristic: description

text: Togo

text: human

text: diseased

text: homo sapiens

text: female

text: HPV

text: cervical swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA first public

text: UMR 261

characteristic: INSDC center name

text: public

text: CARESP

text: Didier Ekouevi

text: HPV from patient 30, anal

text: Togo

characteristic: geographic location (country and/or sea)

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: female

text: HPV

text: anal swab

text: Human papillomavirus

text: Human papillomavirus

text: HPV


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Unit of Animal Genomics, GIGA Institute, University of Liege

unit: month

characteristic: age

text: ArrayExpress

characteristic: broker name

text: cattle

characteristic: common name

text: Protocols: Blood samples were collected from jugular vein using K2-EDTA blood collection tubes. DNA was isolated from a blood sample using Quick-DNA Miniprep Plus kit (Zymo research) following manufacturer's instructions. Genomic DNA library was prepared using 50 ng of DNA (for a sample with a word, gDNA, in a file name) - 100 ng (gDNA2X) isolated from a Holstein male (HOL1_m) by following Nextera DNA Sample Preparation Guide (Illumina). The tagmented DNA was purified and eluted in 21 ul elution buffer using the MinElute PCR purification kit. The DNA was amplified using NEBNext High-Fidelity 2X PCR Master Mix with Ad1 and Ad2 primers (Buenrostro et al., 2013) for 5 PCR-cycles. The amplified libraries were purified and eluted in 51 ul elution buffer using the MinElute PCR purification kit. Library size distribution was monitored using 10 ul of the library by QIAxcel capillary electrophoresis (Qiagen). Large DNA fragments were eliminated using AMPure XP magnetic beads (Beckman Coulter, Brea, CA) by a right-side size selection using 0.55 x followed by 1.5 x ratio of beads to sample. Library concentration was estimated using KAPA Library Quantification kit (Kapa Biosystems, Wilmington, MA).

text: juvenile stage

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

characteristic: individual

text: not applicable

text: Bos taurus

text: Bos taurus

text: blood

characteristic: organism part

text: Bos taurus

text: male

characteristic: sex

text: Holstein

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Unit of Animal Genomics, GIGA Institute, University of Liege

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: ArrayExpress

text: cattle

characteristic: description

text: juvenile stage

text: wild type genotype

text: not applicable

characteristic: isolate

text: Bos taurus

characteristic: organism

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Holstein

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: TEL-AVIV UNIVERSITY

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:TEL-AVIV UNIVERSITY

text: Whole genome sequencing of Myxobolus shantungensis

text: Myxobolus shantungensis

text: Myxobolus shantungensis

text: Myxobolus shantungensis


text: TEL-AVIV UNIVERSITY

text: public

text: Whole genome sequencing of Myxobolus wulii

text: Myxobolus wulii

text: Myxobolus wulii

text: Myxobolus wulii


text: TEL-AVIV UNIVERSITY

text: public

text: Whole genome sequencing of Thelohanellus kitauei

text: Thelohanellus kitauei

text: Thelohanellus kitauei

text: Thelohanellus kitauei


text: TEL-AVIV UNIVERSITY

text: public

text: Whole genome sequencing of Sphaeromyxa zaharoni

text: Sphaeromyxa zaharoni

text: Sphaeromyxa zaharoni

text: Sphaeromyxa zaharoni


text: GHENT UNIVERSITY

text: public

tag: Namespace:GHENT UNIVERSITY

characteristic: collection date

text: Donor 1, Archaeal primers

text: Digestive tract environment

characteristic: environment (biome)

text: City

characteristic: environment (feature)

text: Faeces

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: Donor 1, Archaeal primers


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Donor 1, Archaeal primers, duplicate

characteristic: description

text: Digestive tract environment

text: City

text: Faeces

text: Belgium

text: human-gut

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: Donor 1, Archaeal primers, duplicate

characteristic: title


characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: Donor 2, Archaeal primers

text: Digestive tract environment

characteristic: environment (biome)

text: City

characteristic: environment (feature)

text: Faeces

text: Belgium

text: human-gut

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: Donor 2, Archaeal primers


text: GHENT UNIVERSITY

text: public

text: Donor 3, Archaeal primers

text: Digestive tract environment

text: City

text: Faeces

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: Donor 3, Archaeal primers


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Donor 4, Archaeal primers

characteristic: description

text: Digestive tract environment

text: City

text: Faeces

text: Belgium

text: human-gut

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: Donor 4, Archaeal primers

characteristic: title


characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC first public

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: Donor 5, Archaeal primers

text: Digestive tract environment

characteristic: environment (biome)

text: City

characteristic: environment (feature)

text: Faeces

text: Belgium

text: human-gut

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: Donor 5, Archaeal primers


text: GHENT UNIVERSITY

text: public

text: Donor 6, Archaeal primers

text: Digestive tract environment

text: City

text: Faeces

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: Donor 6, Archaeal primers


characteristic: ENA-CHECKLIST

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text: GHENT UNIVERSITY

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Donor 7, Archaeal primers

characteristic: description

text: Digestive tract environment

text: City

text: Faeces

text: Belgium

text: human-gut

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: Donor 7, Archaeal primers

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text: Donor 8, Archaeal primers

text: Digestive tract environment

characteristic: environment (biome)

text: City

characteristic: environment (feature)

text: Faeces

text: Belgium

text: human-gut

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: Donor 8, Archaeal primers


text: GHENT UNIVERSITY

text: public

text: Donor 9, Archaeal primers

text: Digestive tract environment

text: City

text: Faeces

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: Donor 9, Archaeal primers


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Donor 10, Archaeal primers

characteristic: description

text: Digestive tract environment

text: City

text: Faeces

text: Belgium

text: human-gut

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: Donor 10, Archaeal primers

characteristic: title


characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: Donor 1, Universal primers

text: Digestive tract environment

characteristic: environment (biome)

text: City

characteristic: environment (feature)

text: Faeces

text: Belgium

text: human-gut

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: Donor 1, Universal primers


text: GHENT UNIVERSITY

text: public

text: Donor 1, Universal primers, duplicate

text: Digestive tract environment

text: City

text: Faeces

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: Donor 1, Universal primers, duplicate


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Donor 2, Universal primers

characteristic: description

text: Digestive tract environment

text: City

text: Faeces

text: Belgium

text: human-gut

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: Donor 2, Universal primers

characteristic: title


characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: Donor 3, Universal primers

text: Digestive tract environment

characteristic: environment (biome)

text: City

characteristic: environment (feature)

text: Faeces

text: Belgium

text: human-gut

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: Donor 3, Universal primers


text: GHENT UNIVERSITY

text: public

text: Donor 4, Universal primers

text: Digestive tract environment

text: City

text: Faeces

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: Donor 4, Universal primers


characteristic: ENA-CHECKLIST

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characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Donor 5, Universal primers

characteristic: description

text: Digestive tract environment

text: City

text: Faeces

text: Belgium

text: human-gut

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: Donor 5, Universal primers

characteristic: title


characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: Donor 6, Universal primers

text: Digestive tract environment

characteristic: environment (biome)

text: City

characteristic: environment (feature)

text: Faeces

text: Belgium

text: human-gut

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: Donor 6, Universal primers


text: GHENT UNIVERSITY

text: public

text: Donor 7, Universal primers

text: Digestive tract environment

text: City

text: Faeces

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: Donor 7, Universal primers


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: GHENT UNIVERSITY

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Donor 8, Universal primers

characteristic: description

text: Digestive tract environment

text: City

text: Faeces

text: Belgium

text: human-gut

text: human gut metagenome

characteristic: organism

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: Donor 8, Universal primers

characteristic: title


characteristic: ENA-LAST-UPDATE

text: GHENT UNIVERSITY

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: Donor 9, Universal primers

text: Digestive tract environment

characteristic: environment (biome)

text: City

characteristic: environment (feature)

text: Faeces

text: Belgium

text: human-gut

text: human gut metagenome

text: EOS-MiQuant

text: human gut metagenome

text: Illumina Miseq

text: Donor 9, Universal primers


text: GHENT UNIVERSITY

text: public

text: Donor 10, Universal primers

text: Digestive tract environment

text: City

text: Faeces

characteristic: environment (material)

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

characteristic: investigation type

text: human gut metagenome

text: EOS-MiQuant

characteristic: project name

text: human gut metagenome

text: Illumina Miseq

characteristic: sequencing method

text: Donor 10, Universal primers


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

characteristic: INSDC center name

text: public

tag: Namespace:Tata Memorial Centre - Advanced Centre for Treatment, Research and Education in Cancer

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: human

characteristic: common name

text: Protocols: Imatinib resistant K562 cells, which were established in lab, were transduced with to lentiviral particles containing shRNA 2655.2 to knockdown PLAG1 (from Sigma), and lentiviral particles containing pLKO.1-empty vectors were generated in the lab. Puromycine based selection was carried out and polyclonal populations were established for empty vector and PLAG1 knockdown. Further, with flow assisted cell sorting monoclonal populations were generated and expanded. RNA was extracted from both empty vector containing cells and PLAG1 knockdown cells. RNA was extracted from imatinib-sensitive and -resistant K562 cells, using AllPrep DNA/RNA/miRNA Universal Kit (Qiagen, MD, USA: catalogue no. 80224) according to the manufacturer's recommendations. RNA samples were subjected to the library preparation as per NEB Ultra RNA-Seq Library Prep kit protocol (Cat# E7530L).

characteristic: description

text: chronic myelogenous leukemia

characteristic: disease

text: pLKO.1-empty vector

characteristic: genotype

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: bone marrow

characteristic: organism part

text: imatinib resistant

characteristic: phenotype

text: Homo sapiens

characteristic: title


characteristic: ENA-LAST-UPDATE

text: Tata Memorial Centre - Advanced Centre for Treatment, Research and Education in Cancer

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: human

text: chronic myelogenous leukemia

text: pLKO.1-empty vector

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: imatinib resistant

text: Homo sapiens


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

characteristic: INSDC center name

text: public

text: ArrayExpress

text: human

text: chronic myelogenous leukemia

text: PLAG1 knockdown by shRNA

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: bone marrow

text: imatinib resistant

text: Homo sapiens


E-MTAB-11896:K562 R0.25

text: public

text: E-MTAB-11896:K562 R0.25

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: hematopoietic cell

text: human

characteristic: common name

text: Protocols: Gradual dose escalation protocol was used to establish imatinib-resistant K562 cell lines. K562 cells resistant to 0.25 μM, 0.5 μM, and 0.75 μM imatinib were maintained in cRPMI medium and the respective imatinib concentration and parental K562 cells were maintained in cRPMI medium only. Imatinib resistance was checked on the IC50 value for imatinib obtained from MTT assay. DNA was extracted from imatinib-sensitive and -resistant K562 cells, using AllPrep DNA/RNA/miRNA Universal Kit (Qiagen, MD, USA: catalogue no. 80224) according to the manufacturer's recommendations. WGS was performed on imatinib-sensitive and -resistant (to 0.25, 0.5, and 0.75 M imatinib) K562 cells. Library preparation was done by 30x WGS KAPA PCR-Free v2.1 kit, as per manufacturers instruction.

characteristic: description

text: chronic myelogenous leukemia

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: K562 R0.25


E-MTAB-11896:K562 R0.5

text: public

text: E-MTAB-11896:K562 R0.5

text: ArrayExpress

text: hematopoietic cell

text: human

text: chronic myelogenous leukemia

characteristic: disease

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

text: K562 R0.5


E-MTAB-11896:K562 R0.75

text: public

text: E-MTAB-11896:K562 R0.75

text: ArrayExpress

text: hematopoietic cell

text: human

text: chronic myelogenous leukemia

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: K562 R0.75

characteristic: title


E-MTAB-11896:K562 S

characteristic: ENA-LAST-UPDATE

text: public

text: E-MTAB-11896:K562 S

text: ArrayExpress

text: hematopoietic cell

text: human

text: chronic myelogenous leukemia

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: K562 S


text: positive

characteristic: ArrayExpress-Phenotype

text: unknown

characteristic: ArrayExpress-Sex

text: metagenome

characteristic: ArrayExpress-Species

text: SC

characteristic: INSDC first public

text: public

text: metagenome

text: metagenome

text: metagenome

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Key Laboratory of Environmental and Applied Microbiology, CAS

characteristic: collection date

text: fecal

characteristic: environment (biome)

text: fecal

characteristic: environment (feature)

text: fecal

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: gut metagenome

text: fecal

characteristic: project name

text: gut metagenome

characteristic: sequencing method

text: fecal

text: water

characteristic: water environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Key Laboratory of Environmental and Applied Microbiology, CAS

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: Submitter Id

text: fecal

text: fecal

text: fecal

text: China

text: metagenome

text: gut metagenome

characteristic: organism

text: fecal

text: gut metagenome

text: fecal

characteristic: title

text: water


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: collection date

text: soil

characteristic: description

text: soil

characteristic: environment (biome)

text: soil

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: China

characteristic: geographic location (elevation)

text: single amplified genome

text: gut metagenome

text: Corpse

text: gut metagenome

text: MiSeq

text: soil

characteristic: soil environmental package

text: soil


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: KAUST, CDA, Simon Krattinger's group

text: public

text: ena-SAMPLE-TAB-06-07-2022-08:04:48:261-85188

tag: Namespace:KAUST, CDA, Simon Krattinger's group

text: Triticum monococcum

characteristic: sample alias

text: Triticum monococcum


text: KAUST, CDA, Simon Krattinger's group

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ena-SAMPLE-TAB-06-07-2022-08:04:48:261-85189

characteristic: Submitter Id

text: Triticum monococcum

characteristic: organism

text: Triticum monococcum


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Leibniz Institute of Freshwater Ecology and Inland Fisheries

text: Site 1 High rep a

text: Estuarine

text: estuarine marsh

text: soil

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: estuary metagenome

text: Metagenomes from Elbe Estuary Particles (2021-2022)

characteristic: project name

text: estuary metagenome

text: NovaSeq 6000 S4

characteristic: sequencing method

text: soil

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Leibniz Institute of Freshwater Ecology and Inland Fisheries

text: public

characteristic: SRA accession

characteristic: collection date

text: Site 1 High rep c

characteristic: description

text: Estuarine

characteristic: environment (biome)

text: estuarine marsh

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Germany

characteristic: geographic location (elevation)

text: metagenome

text: estuary metagenome

text: estuary metagenome

text: NovaSeq 6000 S4

text: soil

characteristic: soil environmental package


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: Site 1 Low rep a

text: Estuarine

text: estuarine marsh

text: soil

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: metagenome

text: estuary metagenome

characteristic: organism

text: estuary metagenome

text: NovaSeq 6000 S4

text: soil


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: collection date

text: Site 1 Low rep c

text: Estuarine

text: estuarine marsh

text: soil

text: Germany

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: estuary metagenome

characteristic: project name

text: estuary metagenome

text: NovaSeq 6000 S4

characteristic: sequencing method

text: soil

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Site 1 P zone rep a

characteristic: description

text: Estuarine

characteristic: environment (biome)

text: estuarine marsh

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Germany

characteristic: geographic location (elevation)

text: metagenome

text: estuary metagenome

text: estuary metagenome

text: NovaSeq 6000 S4

text: soil

characteristic: soil environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Site 1 p zone rep c

text: Estuarine

text: estuarine marsh

text: soil

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: metagenome

text: estuary metagenome

characteristic: organism

text: estuary metagenome

text: NovaSeq 6000 S4

text: soil


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: collection date

text: Site 2 High rep a

text: Estuarine

text: estuarine marsh

text: soil

text: Germany

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: estuary metagenome

characteristic: project name

text: estuary metagenome

text: NovaSeq 6000 S4

characteristic: sequencing method

text: soil

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

text: Site 2 High rep c

characteristic: description

text: Estuarine

characteristic: environment (biome)

text: estuarine marsh

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Germany

characteristic: geographic location (elevation)

text: metagenome

text: estuary metagenome

text: estuary metagenome

text: NovaSeq 6000 S4

text: soil

characteristic: soil environmental package


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Site 2 Low rep a

text: Estuarine

text: estuarine marsh

text: soil

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: metagenome

text: estuary metagenome

characteristic: organism

text: estuary metagenome

text: NovaSeq 6000 S4

text: soil


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: collection date

text: Site 2 Low rep c

text: Estuarine

text: estuarine marsh

text: soil

text: Germany

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: estuary metagenome

characteristic: project name

text: estuary metagenome

text: NovaSeq 6000 S4

characteristic: sequencing method

text: soil

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Site 2 P zone rep a

characteristic: description

text: Estuarine

characteristic: environment (biome)

text: estuarine marsh

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Germany

characteristic: geographic location (elevation)

text: metagenome

text: estuary metagenome

text: estuary metagenome

text: NovaSeq 6000 S4

text: soil

characteristic: soil environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Site 2 p zone rep c

text: Estuarine

text: estuarine marsh

text: soil

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: metagenome

text: estuary metagenome

characteristic: organism

text: estuary metagenome

text: NovaSeq 6000 S4

text: soil


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: collection date

text: Site 3 High rep a

text: Estuarine

text: estuarine marsh

text: soil

text: Germany

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: estuary metagenome

characteristic: project name

text: estuary metagenome

text: NovaSeq 6000 S4

characteristic: sequencing method

text: soil

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

text: Site 3 High rep c

characteristic: description

text: Estuarine

characteristic: environment (biome)

text: estuarine marsh

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Germany

characteristic: geographic location (elevation)

text: metagenome

text: estuary metagenome

text: estuary metagenome

text: NovaSeq 6000 S4

text: soil

characteristic: soil environmental package


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Site 3 Low rep a

text: Estuarine

text: estuarine marsh

text: soil

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: metagenome

text: estuary metagenome

characteristic: organism

text: estuary metagenome

text: NovaSeq 6000 S4

text: soil


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: collection date

text: Site 3 Low rep c

text: Estuarine

text: estuarine marsh

text: soil

text: Germany

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: estuary metagenome

characteristic: project name

text: estuary metagenome

text: NovaSeq 6000 S4

characteristic: sequencing method

text: soil

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Site 3 P zone rep a

characteristic: description

text: Estuarine

characteristic: environment (biome)

text: estuarine marsh

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Germany

characteristic: geographic location (elevation)

text: metagenome

text: estuary metagenome

text: estuary metagenome

text: NovaSeq 6000 S4

text: soil

characteristic: soil environmental package


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Site 3 p zone rep c

text: Estuarine

text: estuarine marsh

text: soil

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (depth)

characteristic: geographic location (latitude)

text: metagenome

text: estuary metagenome

characteristic: organism

text: estuary metagenome

text: NovaSeq 6000 S4

text: soil


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: MEGAHIT; kmer set 29,49,69,89,109,119,129,149

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater lake

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Planctomycetes assembled from Lake Attersee

text: fresh water

characteristic: environmental medium

text: Austria

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

characteristic: isolation source

text: lake

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: Phycisphaerales bacterium

characteristic: project name

characteristic: sample derived from

text: Phycisphaerales bacterium

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater lake

text: checkm

text: Planctomycetes assembled from Lake Lugano

characteristic: description

text: fresh water

text: Italy

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome-assembled genome

text: Freshwater lake

text: lake

text: freshwater metagenome

text: Phycisphaerales bacterium

characteristic: organism

text: Phycisphaerales bacterium

text: Illumina NovaSeq 6000

text: multi-marker approach


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: coverage and kmer

text: freshwater lake

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Planctomycetes assembled from Lake Medard

text: fresh water

characteristic: environmental medium

text: Czech Republic

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

characteristic: isolation source

text: lake

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: Phycisphaerales bacterium

characteristic: project name

characteristic: sample derived from

text: Phycisphaerales bacterium

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

text: freshwater lake

text: checkm

text: Planctomycetes assembled from Lake Most

characteristic: description

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome-assembled genome

text: Freshwater lake

text: lake

text: freshwater metagenome

text: Phycisphaerales bacterium

characteristic: organism

text: Phycisphaerales bacterium

text: Illumina NovaSeq 6000

text: multi-marker approach