characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured Acidimicrobiales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Acidimicrobiales bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522971_concoct_56_1705335396


status: PUBLIC

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR1514963 of study SRP044326.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

unit: DD

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured Rhizobium sp.

characteristic: organism

text: Illumina HiSeq 2500 sequencing: Metagenomic analysis from lakes in Amazon river

text: uncultured Rhizobium sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1514963_binner13_1_1705335396

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: Acinetobacter junii

characteristic: project name

characteristic: sample derived from

text: Acinetobacter junii

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1514963_binner12_72_1705335396


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1514963_binner13_67_1705335396

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR1522964 of study SRP044326.

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522964_binner23_30_1705335396


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR1522971 of study SRP044326.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured Rickettsiales bacterium

characteristic: organism

text: uncultured Rickettsiales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522971_concoct_105_1705335397

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522971_concoct_110_1705335397


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured Holophagaceae bacterium

characteristic: organism

text: uncultured Holophagaceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1514963_metabat2_37_1705335398

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured Thermoleophilia bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Thermoleophilia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522971_binner13_102_1705335398


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured Planctomycetaceae bacterium

characteristic: organism

text: uncultured Planctomycetaceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522971_binner23_134_1705335398

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522971_metabat2_101_1705335399


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured Methylocucumis sp.

characteristic: organism

text: uncultured Methylocucumis sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522971_concoct_76_1705335399

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1514963_concoct_106_1705335399


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured Hyphomicrobiales bacterium

characteristic: organism

text: Illumina HiSeq 2500 sequencing: Metagenomic analysis from lakes in Amazon river

text: uncultured Hyphomicrobiales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522971_concoct_121_1705335400

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522964_binner123_21_1705335400


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR1514963 of study SRP044326.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1514963_concoct_65_1705335401

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured Limnohabitans sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Limnohabitans sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522971_binner12_34_1705335401


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR1522964 of study SRP044326.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522964_concoct_4_1705335401

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured Methylophilaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Methylophilaceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522964_concoct_72_1705335402


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR1522971 of study SRP044326.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured Thiotrichales bacterium

characteristic: organism

text: uncultured Thiotrichales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522971_concoct_148_1705335402

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured Methylocystaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Methylocystaceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522971_metabat2_5_1705335402


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR1515032 of study SRP044326.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured archaeon

characteristic: organism

text: uncultured archaeon

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1515032_metabat2_1_1705335402

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522971_concoct_181_1705335403


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured Methylococcaceae bacterium

characteristic: organism

text: uncultured Methylococcaceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1514963_concoct_40_1705335403

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured Novosphingobium sp.

text: Illumina HiSeq 2500 sequencing: Metagenomic analysis from lakes in Amazon river

characteristic: project name

characteristic: sample derived from

text: uncultured Novosphingobium sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522964_concoct_73_1705335403


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR1522973 of study SRP044326.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522973_binner13_1_1705335404

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522973_binner123_12_1705335404


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522973_binner13_99_1705335405

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR1522964 of study SRP044326.

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured Hyphomicrobiales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Hyphomicrobiales bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522964_metabat2_25_1705335405


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR1522971 of study SRP044326.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured Singulisphaera sp.

characteristic: organism

text: uncultured Singulisphaera sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522971_concoct_179_1705335405

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522964_concoct_30_1705335406


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured Rhodoluna sp.

characteristic: organism

text: uncultured Rhodoluna sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522971_binner12_82_1705335406

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR1518285 of study SRP044326.

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured Cyanobium sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Cyanobium sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1518285_concoct_31_1705335406


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured Methylocystis sp.

characteristic: organism

text: uncultured Methylocystis sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522971_metabat2_12_1705335406

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522973_binner13_6_1705335406


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR1522974 of study SRP044326.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured bacterium

characteristic: organism

text: Illumina HiSeq 2500 sequencing: Metagenomic analysis from lakes in Amazon river

text: uncultured bacterium

text: Illumina HiSeq 1000

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522974_concoct_74_1705335407

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR1522973 of study SRP044326.

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured Ilumatobacteraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Ilumatobacteraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522973_binner13_69_1705335407


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured Actinomycetales bacterium

characteristic: organism

text: uncultured Actinomycetales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522973_binner13_2_1705335408

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured Actinomycetales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Actinomycetales bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522973_concoct_24_1705335408


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Illumina HiSeq 1000

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522974_binner123_28_1705335408

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured Methylococcaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Methylococcaceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522973_concoct_192_1705335409


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR1522971 of study SRP044326.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522971_concoct_158_1705335409

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured Alphaproteobacteria bacterium

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522973_concoct_19_1705335409


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522973_concoct_194_1705335410

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured Streptomycetaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Streptomycetaceae bacterium

text: Illumina HiSeq 1000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522974_metabat2_38_1705335410


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522973_concoct_13_1705335410

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured Gammaproteobacteria bacterium

text: Illumina HiSeq 2500 sequencing: Metagenomic analysis from lakes in Amazon river

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522973_binner13_7_1705335411


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR1522973 of study SRP044326.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured Hyphomicrobiaceae bacterium

characteristic: organism

text: uncultured Hyphomicrobiaceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522973_concoct_181_1705335411

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured Roseomonas sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Roseomonas sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522971_metabat2_62_1705335412


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522971_metabat2_128_1705335412

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522973_binner12_21_1705335412


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR1522974 of study SRP044326.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium

text: Illumina HiSeq 1000

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522974_concoct_51_1705335413

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured Limnohabitans sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Limnohabitans sp.

text: Illumina HiSeq 1000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522974_binner13_8_1705335413


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured Burkholderiales bacterium

characteristic: organism

text: uncultured Burkholderiales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522973_binner12_123_1705335414

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR1522971 of study SRP044326.

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured Verrucomicrobiales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Verrucomicrobiales bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522971_concoct_94_1705335414


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured Gemmataceae bacterium

characteristic: organism

text: uncultured Gemmataceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522973_metabat2_110_1705335414

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522973_binner123_17_1705335414


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured Opitutae bacterium

characteristic: organism

text: Illumina HiSeq 2500 sequencing: Metagenomic analysis from lakes in Amazon river

text: uncultured Opitutae bacterium

text: Illumina HiSeq 1000

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522974_binner123_3_1705335415

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR1522973 of study SRP044326.

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured Oxalobacteraceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Oxalobacteraceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522973_binner13_33_1705335415


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured Hyphomicrobiales bacterium

characteristic: organism

text: uncultured Hyphomicrobiales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522973_concoct_123_1705335416

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: freshwater metagenome

text: river

characteristic: local environmental context

text: freshwater metagenome

characteristic: metagenomic source

text: uncultured Thermoleophilia bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Thermoleophilia bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1522973_binner13_68_1705335416


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: collection date

characteristic: common name

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: freshwater metagenome

text: river

text: freshwater metagenome

text: uncultured Alphaproteobacteria bacterium

characteristic: organism

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1522973_binner12_24_1705335416

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: UOB

text: public

text: zebrafish

text: 24 hpf embryo collected at 1118 from a cross with a fed father

text: Sweden

text: Danio rerio

text: Danio rerio


characteristic: External Id

text: UOB

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: zebrafish

text: 24 hpf embryo collected at 1118 from a cross with a starved father

text: Sweden

text: Danio rerio

text: Danio rerio


text: UOB

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: zebrafish

text: 24 hpf embryo collected at 1203 from a cross with a fed father

text: Sweden

text: Danio rerio

text: Danio rerio


text: UOB

text: public

characteristic: Submitter Id

text: zebrafish

text: 24 hpf embryo collected at 1203 from a cross with a starved father

text: Sweden

text: Danio rerio

text: Danio rerio


text: UOB

text: public

text: zebrafish

text: 24 hpf embryo collected at 1210 from a cross with a fed father

text: Sweden

text: Danio rerio

text: Danio rerio


text: UOB

text: public

text: zebrafish

text: 24 hpf embryo collected at 1210 from a cross with a starved father

text: Sweden

text: Danio rerio

text: Danio rerio


text: UOB

text: public

text: zebrafish

text: 24 hpf embryo collected at 1219 from a cross with a fed father

text: Sweden

text: Danio rerio

text: Danio rerio


text: UOB

text: public

text: zebrafish

text: 24 hpf embryo collected at 1219 from a cross with a starved father

text: Sweden

text: Danio rerio

text: Danio rerio


text: UOB

text: public

text: zebrafish

text: 24 hpf embryo collected at 1242 from a cross with a fed father

text: Sweden

text: Danio rerio

text: Danio rerio


text: UOB

text: public

text: zebrafish

text: 24 hpf embryo collected at 1242 from a cross with a starved father

text: Sweden

text: Danio rerio

text: Danio rerio


text: public

tag: Namespace:Fundacion Instituto de Investigacion Fundacion Jimenez Diaz

text: Fundación Instituto de Investigación Sanitaria Fundación Jiménez Díaz, Madrid, Spain

characteristic: collecting institution

text: Celia Perales

characteristic: collector name

text: SARS-CoV-2 sequence obtained from patient Pt454

text: Spain

text: Madrid area

characteristic: geographic location (region and locality)

text: Homo sapiens

characteristic: host common name

text: diseased

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: drag and drop uploader tool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Fundacion Instituto de Investigacion Fundacion Jimenez Diaz

text: public

characteristic: collection date

text: Celia Perales

text: SARS-CoV-2 sequence obtained from patient Pt455

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

text: Madrid area

text: Homo sapiens

text: diseased

text: homo sapiens

text: male

characteristic: organism

text: drag and drop uploader tool

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Celia Perales

characteristic: collector name

text: SARS-CoV-2 sequence obtained from patient Pt456

text: Spain

text: Madrid area

characteristic: geographic location (region and locality)

text: Homo sapiens

text: diseased

text: homo sapiens

text: male

text: drag and drop uploader tool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: public

text: Celia Perales

text: SARS-CoV-2 sequence obtained from patient Pt457

text: Spain

text: Madrid area

text: Homo sapiens

characteristic: host common name

text: diseased

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

characteristic: host subject id

characteristic: isolate

characteristic: sample capture status

text: drag and drop uploader tool


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: collection date

text: Celia Perales

text: SARS-CoV-2 sequence obtained from patient Pt458

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

text: Madrid area

text: Homo sapiens

text: diseased

text: homo sapiens

text: female

characteristic: organism

text: drag and drop uploader tool

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Department of Biomedicine (DBM)

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Department of Biomedicine (DBM)

characteristic: Submitter Id

text: human

characteristic: common name

text: IGLext

text: Germany

text: Homo sapiens

text: Homo sapiens


text: Department of Biomedicine (DBM)

text: public

text: human

text: IGH

text: Germany

text: Homo sapiens

text: Homo sapiens


text: Anthony Smith, NICD

text: public

tag: Namespace:Anthony Smith, NICD

text: EnteroBase

characteristic: broker name

text: EnteroBase

text: A. Smith, National Institute for Communicable Diseases

text: Whole genome sequencing data uploaded by EnteroBase user

text: South Africa

text: Western Cape

characteristic: geographic location (region and locality)

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Typhi

characteristic: serovar

characteristic: strain


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Anthony Smith, NICD

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: EnteroBase

text: EnteroBase

text: South Africa

text: Western Cape

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Typhi


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

characteristic: collection date

characteristic: description

text: South Africa

characteristic: geographic location (country and/or sea)

text: Gauteng

text: Human, Blood culture

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Typhi


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

tag: Namespace:Karolinska Institutet, Department of Microbiology, Tumor and Cell Biology and Science for Life Laboratory

unit: week

characteristic: age

text: ArrayExpress

text: not collected

text: house mouse

text: Protocols: Mouse livers were perfused and washed with PBS. Livers were then fixed in 1% formaldehyde, the reaction quenced with 2.5M Glycine and kept at -80°C until use. Livers were homogenized using a douncer and washed twice with ice-cold PBS. 5 to 6-week old male mice were fed a control or high-fat diet for 13 weeks. A subset of mice fed a high-fat diet was additionally injected intra-peritoneally with the estrogen receptor agonists 17-beta estradiol (E2) or Diarylproprionitrile (DPN) every other day for the last three weeks of the diet. Control animals underwent sham-injections in the same period. Sample numbers indicate individual mice. Matching RNAseq data for the same mice is available under E-MTAB-11833. Raw sequencing output was demultiplexed and converted to fastq files by the inbuilt Illumina bcl2fastq tool. Individual lanes were contatenated to one fastq file per sample (cat file1.fastq file2.fastq file3.fastq file4.fastq > file5.fastq). Files were trimmed using trimmomatic v0.36. Crosslinked cells were lysed and nuclei extracted as described in detail in Schmidt et al., Methods, 2009. 10.1016/j.ymeth.2009.03.001 Chromatin was sonicated using a Sonics Vibra cell VCX 750 set to 32% duty cycle for 30 cycles (30s on, 59s off).ChIP was performed using antibodies against H3K27ac (Abcam, #4729, lot: GR3211959-1, 5µg) and H3K4me3 (monoclonal, Merck 05-1339, lot: 3305923, 5µg) as previously described in detail in Schmidt et al, Methods, 2009. Sequencing libraries were generated using the Thruplex DNA-Seq Kit (TakaraBio), size-selected and the quality assessed using Bioanalyzer DNA High Sensitivity chips (Agilent Technologies) according to manufacturer’s protocols. Libraries were quantified using KAPA quantification kit (Roche).

text: adult

characteristic: developmental stage

text: control diet

characteristic: diet

text: wild type genotype

characteristic: genotype

text: not collected

text: Sample 9 - CD2

characteristic: individual

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: liver

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Karolinska Institutet, Department of Microbiology, Tumor and Cell Biology and Science for Life Laboratory

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

text: house mouse

characteristic: common name

text: adult

text: control diet

text: wild type genotype

text: not collected

text: Sample 9 - CD2

text: not applicable

text: Mus musculus

text: Mus musculus

text: liver

text: Mus musculus

text: male

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: age

text: ArrayExpress

text: not collected

characteristic: collection date

text: house mouse

characteristic: description

text: adult

characteristic: developmental stage

text: control diet

characteristic: diet

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: Sample 11 - CD6

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: liver

text: Mus musculus

text: male


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: not collected

text: house mouse

text: adult

text: control diet

text: wild type genotype

characteristic: genotype

text: not collected

text: Sample 12 - CD9

characteristic: individual

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: liver

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: not collected

text: house mouse

characteristic: common name

text: adult

text: high-fat diet

text: wild type genotype

text: not collected

text: Sample 14 - HFD3

text: not applicable

text: Mus musculus

text: Mus musculus

text: liver

text: Mus musculus

text: male

characteristic: strain


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: ArrayExpress

text: not collected

characteristic: collection date

text: house mouse

characteristic: description

text: adult

characteristic: developmental stage

text: high-fat diet

characteristic: diet

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: Sample 13 - HFD4

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: liver

text: Mus musculus

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ArrayExpress

text: not collected

text: house mouse

text: adult

text: high-fat diet

text: wild type genotype

characteristic: genotype

text: not collected

text: Sample 16 - HFD6

characteristic: individual

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: liver

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-11929_2:HFD_DIP10_Sample20_H3K27ac

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: not collected

text: house mouse

characteristic: common name

text: adult

text: high-fat diet

text: wild type genotype

text: not collected

text: Sample 20 - DIP10

text: not applicable

text: Mus musculus

text: Mus musculus

text: liver

text: Mus musculus

text: male

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11929_2:HFD_DIP3_Sample17_H3K27ac

text: ArrayExpress

text: not collected

characteristic: collection date

text: house mouse

characteristic: description

text: adult

characteristic: developmental stage

text: high-fat diet

characteristic: diet

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: Sample 17 - DIP3

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: liver

text: Mus musculus

text: male


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11929_2:HFD_DIP6_Sample19_H3K27ac

text: ArrayExpress

text: not collected

text: house mouse

text: adult

text: high-fat diet

text: wild type genotype

characteristic: genotype

text: not collected

text: Sample 19 - DIP6

characteristic: individual

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: liver

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11929_2:HFD_DPN2_Sample21_H3K27ac

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: not collected

text: house mouse

characteristic: common name

text: adult

text: high-fat diet

text: wild type genotype

text: not collected

text: Sample 21 - DPN2

text: not applicable

text: Mus musculus

text: Mus musculus

text: liver

text: Mus musculus

text: male

characteristic: strain


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11929_2:HFD_DPN3_Sample22_H3K27ac

text: ArrayExpress

text: not collected

characteristic: collection date

text: house mouse

characteristic: description

text: adult

characteristic: developmental stage

text: high-fat diet

characteristic: diet

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: Sample 22 - DPN3

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: liver

text: Mus musculus

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11929_2:HFD_DPN6_Sample23_H3K27ac

text: ArrayExpress

text: not collected

text: house mouse

text: adult

text: high-fat diet

text: wild type genotype

characteristic: genotype

text: not collected

text: Sample 23 - DPN6

characteristic: individual

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: liver

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: E-MTAB-11929_2:HFD_E2_2_Sample26_H3K27ac

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: not collected

text: house mouse

characteristic: common name

text: adult

text: high-fat diet

text: wild type genotype

text: not collected

text: Sample 26 - E2_2

text: not applicable

text: Mus musculus

text: Mus musculus

text: liver

text: Mus musculus

text: male

characteristic: strain


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11929_2:HFD_E2_8_Sample27_H3K27ac

text: ArrayExpress

text: not collected

characteristic: collection date

text: house mouse

characteristic: description

text: adult

characteristic: developmental stage

text: high-fat diet

characteristic: diet

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: Sample 27 - E2_8

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: liver

text: Mus musculus

text: male


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11929_2:HFD_E2_9_Sample28_H3K27ac

text: ArrayExpress

text: not collected

text: house mouse

text: adult

text: high-fat diet

text: wild type genotype

characteristic: genotype

text: not collected

text: Sample 28 - E2_9

characteristic: individual

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: liver

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-11929_2:HFD_PPT1_Sample29_H3K27ac

characteristic: Submitter Id

characteristic: age

text: ArrayExpress

characteristic: broker name

text: not collected

text: house mouse

characteristic: common name

text: adult

text: high-fat diet

text: wild type genotype

text: not collected

text: Sample 29 - PPT1

text: not applicable

text: Mus musculus

text: Mus musculus

text: liver

text: Mus musculus

text: male

characteristic: strain


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: E-MTAB-11929_2:HFD_PPT2_Sample30_H3K27ac

text: ArrayExpress

text: not collected

characteristic: collection date

text: house mouse

characteristic: description

text: adult

characteristic: developmental stage

text: high-fat diet

characteristic: diet

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: Sample 30 - PPT2

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: liver

text: Mus musculus

text: male


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: E-MTAB-11929_2:HFD_PPT3_Sample31_H3K27ac

text: ArrayExpress

text: not collected

text: house mouse

text: adult

text: high-fat diet

text: wild type genotype

characteristic: genotype

text: not collected

text: Sample 31 - PPT3

characteristic: individual

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: liver

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: title


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: IOC/Fiocruz

characteristic: INSDC center name

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-15-01-2024-18:56:45:445-250809

characteristic: Submitter Id

text: Conforlab

text: Isolate obtained from water sample for genotyping by SBT

text: Yes

text: Brazil

text: not applicable

characteristic: host health state

text: Homo sapiens and Acanthamoeba spp.

characteristic: host scientific name

text: Hotel faucet

text: 23� 36' 11.422 S 46� 40' 26.058 W

text: Legionella pneumophila

text: Legionella pneumophila


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: IOC/Fiocruz

text: public

text: ena-SAMPLE-TAB-15-01-2024-18:56:45:446-250810

text: Conforlab

characteristic: collection date

characteristic: description

text: Yes

text: Brazil

characteristic: geographic location (country and/or sea)

text: not applicable

text: Homo sapiens and Acanthamoeba spp.

text: Hotel faucet

text: 16� 41' 23.608 S 49� 15' 22.404 W

text: Legionella pneumophila

characteristic: organism

text: Legionella pneumophila


text: IOC/Fiocruz

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-15-01-2024-18:56:45:446-250811

text: Conforlab

text: Yes

text: Brazil

text: not applicable

text: Homo sapiens and Acanthamoeba spp.

characteristic: isolate

text: Hotel faucet

text: 12� 56' 59.890 S 38� 36' 48.086 W

text: Legionella pneumophila

text: Legionella pneumophila


characteristic: ENA-LAST-UPDATE

text: IOC/Fiocruz

text: public

text: ena-SAMPLE-TAB-15-01-2024-18:56:45:446-250812

text: Conforlab

text: Yes

text: Brazil

text: not applicable

text: Homo sapiens and Acanthamoeba spp.

text: Hotel faucet

text: 19� 54' 6.367 S 43� 53' 49.516 W

text: Legionella pneumophila

text: Legionella pneumophila

characteristic: title


characteristic: External Id

text: IOC/Fiocruz

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-15-01-2024-18:56:45:446-250813

text: Conforlab

text: Yes

text: Brazil

text: not applicable

text: Homo sapiens and Acanthamoeba spp.

text: Hotel faucet

text: 19� 54' 6.367 S 43� 53' 49.516 W

text: Legionella pneumophila

text: Legionella pneumophila


text: IOC/Fiocruz

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-15-01-2024-18:56:45:446-250814

text: Conforlab

text: Yes

text: Brazil

text: not applicable

text: Homo sapiens and Acanthamoeba spp.

text: Hotel drinking fountain

text: 19� 54' 6.367 S 43� 53' 49.516 W

text: Legionella pneumophila

text: Legionella pneumophila


text: IOC/Fiocruz

text: public

text: ena-SAMPLE-TAB-15-01-2024-18:56:45:446-250815

characteristic: Submitter Id

text: Conforlab

text: Yes

text: Brazil

text: not applicable

characteristic: host health state

text: Homo sapiens and Acanthamoeba spp.

text: Hotel faucet

text: 30� 4' 27.513 S 51� 11' 27.217 W

text: Legionella pneumophila

text: Legionella pneumophila


characteristic: ENA-CHECKLIST

text: IOC/Fiocruz

text: public

text: ena-SAMPLE-TAB-15-01-2024-18:56:45:446-250816

text: Conforlab

text: Yes

text: Brazil

text: not applicable

text: Homo sapiens and Acanthamoeba spp.

characteristic: host scientific name

text: Hotel faucet

text: 23� 33' 36.054 S 46� 32' 35.499 W

text: Legionella pneumophila

text: Legionella pneumophila


characteristic: ENA-FIRST-PUBLIC

text: IOC/Fiocruz

text: public

text: ena-SAMPLE-TAB-15-01-2024-18:56:45:446-250817

text: Conforlab

characteristic: collection date

text: Yes

text: Brazil

text: not applicable

text: Homo sapiens and Acanthamoeba spp.

text: Hotel faucet

text: 23� 33' 36.054 S 46� 32' 35.499 W

text: Legionella pneumophila

text: Legionella pneumophila


text: IOC/Fiocruz

text: public

text: ena-SAMPLE-TAB-15-01-2024-18:56:45:446-250818

text: Conforlab

characteristic: description

text: Yes

text: Brazil

characteristic: geographic location (country and/or sea)

text: not applicable

text: Homo sapiens and Acanthamoeba spp.

text: Hotel boiler

text: 23� 33' 36.054 S 46� 32' 35.499 W

text: Legionella pneumophila

text: Legionella pneumophila


text: IOC/Fiocruz

characteristic: INSDC last update

text: public

text: ena-SAMPLE-TAB-15-01-2024-18:56:45:446-250819

text: Conforlab

text: Yes

text: Brazil

text: not applicable

text: Homo sapiens and Acanthamoeba spp.

text: Hotel faucet

text: 23� 33' 36.054 S 46� 32' 35.499 W

text: Legionella pneumophila

characteristic: organism

text: Legionella pneumophila


text: IOC/Fiocruz

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-15-01-2024-18:56:45:446-250820

text: Conforlab

text: Yes

text: Brazil

text: not applicable

text: Homo sapiens and Acanthamoeba spp.

characteristic: isolate

text: Hotel Shower

text: 23� 43' 58.902 S 46� 34' 37.520 W

text: Legionella pneumophila

text: Legionella pneumophila


characteristic: ENA-LAST-UPDATE

text: IOC/Fiocruz

text: public

text: ena-SAMPLE-TAB-15-01-2024-18:56:45:446-250821

text: Conforlab

text: Yes

text: Brazil

text: not applicable

text: Homo sapiens and Acanthamoeba spp.

text: Hotel boiler

text: 23� 33' 36.054 S 46� 32' 35.499 W

text: Legionella pneumophila

text: Legionella pneumophila

characteristic: title


characteristic: External Id

text: IOC/Fiocruz

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-15-01-2024-18:56:45:446-250822

text: Conforlab

text: Yes

text: Brazil

text: not applicable

text: Homo sapiens and Acanthamoeba spp.

text: Hotel Shower

text: 23� 43' 58.902 S 46� 34' 37.520 W

text: Legionella pneumophila

text: Legionella pneumophila


text: IOC/Fiocruz

characteristic: INSDC first public

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-15-01-2024-18:56:45:446-250823

text: Conforlab

text: Yes

text: Brazil

text: not applicable

text: Homo sapiens and Acanthamoeba spp.

text: Hotel water tank

text: 23� 43' 58.902 S 46� 34' 37.520 W

text: Legionella pneumophila

text: Legionella pneumophila


text: IOC/Fiocruz

text: public

text: ena-SAMPLE-TAB-15-01-2024-18:56:45:446-250824

characteristic: Submitter Id

text: Conforlab

text: Yes

text: Brazil

text: not applicable

characteristic: host health state

text: Homo sapiens and Acanthamoeba spp.

text: Hotel Shower

text: 22� 53' 50.443 S 43� 21' 9.644 W

text: Legionella pneumophila

text: Legionella pneumophila


characteristic: ENA-CHECKLIST

text: IOC/Fiocruz

text: public

text: ena-SAMPLE-TAB-15-01-2024-18:56:45:446-250825

text: Conforlab

text: Yes

text: Brazil

text: not applicable

text: Homo sapiens and Acanthamoeba spp.

characteristic: host scientific name

text: Hotel boiler

text: 19� 54' 6.367 S 43� 53' 49.516 W

text: Legionella pneumophila

text: Legionella pneumophila


characteristic: ENA-FIRST-PUBLIC

text: IOC/Fiocruz

text: public

text: ena-SAMPLE-TAB-15-01-2024-18:56:45:446-250826

text: Conforlab

characteristic: collection date

text: Isolate obtained from water sample for genotyping by SBT

text: Yes

text: Brazil

text: not applicable

text: Homo sapiens and Acanthamoeba spp.

text: Hotel faucet

text: 19� 54' 6.367 S 43� 53' 49.516 W

text: Legionella pneumophila

text: Legionella pneumophila


text: IOC/Fiocruz

text: public

text: ena-SAMPLE-TAB-15-01-2024-18:56:45:447-250827

text: Conforlab

characteristic: description

text: Yes

text: Brazil

characteristic: geographic location (country and/or sea)

text: not applicable

text: Homo sapiens and Acanthamoeba spp.

text: Hotel boiler

text: 23� 33' 36.054 S 46� 32' 35.499 W

text: Legionella pneumophila

text: Legionella pneumophila


text: IOC/Fiocruz

characteristic: INSDC last update

text: public

text: ena-SAMPLE-TAB-15-01-2024-18:56:45:447-250828

text: Conforlab

text: Yes

text: Brazil

text: not applicable

text: Homo sapiens and Acanthamoeba spp.

text: Hotel faucet

text: 22� 53' 50.443 S 43� 21' 9.644 W

text: Legionella pneumophila

characteristic: organism

text: Legionella pneumophila


text: IOC/Fiocruz

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-15-01-2024-18:56:45:447-250829

text: Conforlab

text: Yes

text: Brazil

text: not applicable

text: Homo sapiens and Acanthamoeba spp.

characteristic: isolate

text: Laboratory cooling tower

text: 23� 33' 36.054 S 46� 32' 35.499 W

text: Legionella pneumophila

text: Legionella pneumophila


characteristic: ENA-LAST-UPDATE

text: IOC/Fiocruz

text: public

text: ena-SAMPLE-TAB-15-01-2024-18:56:45:447-250830

text: Conforlab

text: Yes

text: Brazil

text: not applicable

text: Homo sapiens and Acanthamoeba spp.

text: Laboratory shower

text: 23� 33' 36.054 S 46� 32' 35.499 W

text: Legionella pneumophila

text: Legionella pneumophila

characteristic: title