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text: FAIR Data Station

characteristic: Metadata submission software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biosafety level

characteristic: collection date

text: Air

characteristic: condition 1

text: 10% O2

text: Air

text: Netherlands

text: Wageningen

text: Chemostat with air, 10% O2 and air

characteristic: observation_unit identifier

text: Bioreactir A3 Run 3

characteristic: observation_unit name

text: Pseudomonas putida KT2440

characteristic: organism

text: default

characteristic: packageName

text: Steady state sample with air as gas in

text: RNA sample Bioreactor A3, Run 3, air

text: Pseudomonas putida KT2440

text: Pseudomonas putida KT2440

text: Steady state sample with air as gas in


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: not applicable

characteristic: altitude

text: 2018-09-04 13:08

text: Peru

characteristic: country

text: plant nectar

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Plant (saline)

text: Plant secretion (saline)

text: tropical broadleaf forest biome

text: plant-associated habitat

text: plant nectar

text: plant-associated

text: Peru:Loreto:Fernando Lores

text: Peru

characteristic: height

text: Marcgravia

characteristic: host scientific name

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

characteristic: latitude

characteristic: longitude

text: plant metagenome

text: Philipps university of Marburg

text: TRUE

text: nectar

text: nectar

text: plant metagenome

text: not applicable

characteristic: sex

characteristic: title

text: Vertically Stratified Interactions Of Nectarivores And Nectar-Inhabiting Bacteria In A Liana Flowering Across Forest Strata - ID 15418


characteristic: ENA-LAST-UPDATE

text: UCSDMI

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not applicable

characteristic: collection date

text: 2018-08-28 17:53

text: Peru

text: plant nectar

text: TRUE

text: Host-associated

text: Host-associated (saline)

text: Plant (saline)

text: Plant secretion (saline)

text: tropical broadleaf forest biome

text: plant-associated habitat

text: plant nectar

text: plant-associated

text: Peru:Loreto:Fernando Lores

text: Peru

characteristic: geographic location (country and/or sea)

text: Marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: plant metagenome

characteristic: organism

text: Philipps university of Marburg

text: TRUE

text: nectar

text: nectar

text: plant metagenome

text: not applicable


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: not applicable

characteristic: altitude

text: 2018-08-28 17:56

text: Peru

text: plant nectar

text: TRUE

text: Host-associated

text: Host-associated (saline)

text: Plant (saline)

text: Plant secretion (saline)

text: tropical broadleaf forest biome

text: plant-associated habitat

text: plant nectar

text: plant-associated

text: Peru:Loreto:Fernando Lores

text: Peru

text: Marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: plant metagenome

text: Philipps university of Marburg

text: TRUE

text: nectar

text: nectar

text: plant metagenome

text: not applicable


text: UCSDMI

text: public

text: not applicable

text: 2018-08-30 14:04

text: Peru

characteristic: country

text: plant nectar

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Plant (saline)

text: Plant secretion (saline)

text: tropical broadleaf forest biome

text: plant-associated habitat

text: plant nectar

text: plant-associated

text: Peru:Loreto:Fernando Lores

text: Peru

characteristic: height

text: Marcgravia

characteristic: host scientific name

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

characteristic: latitude

characteristic: longitude

text: plant metagenome

text: Philipps university of Marburg

text: TRUE

text: nectar

text: nectar

text: plant metagenome

text: not applicable


characteristic: ENA-LAST-UPDATE

text: UCSDMI

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not applicable

characteristic: collection date

text: 2018-09-04 13:12

text: Peru

text: plant nectar

text: TRUE

text: Host-associated

text: Host-associated (saline)

text: Plant (saline)

text: Plant secretion (saline)

text: tropical broadleaf forest biome

text: plant-associated habitat

text: plant nectar

text: plant-associated

text: Peru:Loreto:Fernando Lores

text: Peru

text: Marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: plant metagenome

text: Philipps university of Marburg

text: TRUE

text: nectar

text: nectar

text: plant metagenome

text: not applicable

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: not applicable

text: 2018-08-27 17:00

text: Peru

text: plant nectar

text: TRUE

text: Host-associated

text: Host-associated (saline)

text: Plant (saline)

text: Plant secretion (saline)

text: tropical broadleaf forest biome

text: plant-associated habitat

text: plant nectar

text: plant-associated

text: Peru:Loreto:Fernando Lores

text: Peru

characteristic: geographic location (country and/or sea)

text: Marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: plant metagenome

characteristic: organism

text: Philipps university of Marburg

text: TRUE

text: nectar

text: nectar

text: plant metagenome

text: not applicable


text: UCSDMI

characteristic: INSDC last update

text: public

text: not applicable

characteristic: altitude

text: 2018-08-29 13:04

text: Peru

characteristic: country

text: plant nectar

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Plant (saline)

text: Plant secretion (saline)

text: tropical broadleaf forest biome

text: plant-associated habitat

text: plant nectar

text: plant-associated

text: Peru:Loreto:Fernando Lores

text: Peru

characteristic: height

text: Marcgravia

characteristic: host scientific name

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: plant metagenome

text: Philipps university of Marburg

text: TRUE

text: nectar

text: nectar

text: plant metagenome

text: not applicable


characteristic: ENA-LAST-UPDATE

text: UCSDMI

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not applicable

characteristic: collection date

text: 2018-08-31 10:20

text: Peru

text: plant nectar

text: TRUE

text: Host-associated

text: Host-associated (saline)

text: Plant (saline)

text: Plant secretion (saline)

text: tropical broadleaf forest biome

text: plant-associated habitat

text: plant nectar

text: plant-associated

text: Peru:Loreto:Fernando Lores

text: Peru

text: Marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

characteristic: latitude

characteristic: longitude

text: plant metagenome

text: Philipps university of Marburg

text: TRUE

text: nectar

text: nectar

text: plant metagenome

text: not applicable


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: not applicable

text: 2018-08-31 10:24

text: Peru

text: plant nectar

text: TRUE

text: Host-associated

text: Host-associated (saline)

text: Plant (saline)

text: Plant secretion (saline)

text: tropical broadleaf forest biome

text: plant-associated habitat

text: plant nectar

text: plant-associated

text: Peru:Loreto:Fernando Lores

text: Peru

text: Marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: plant metagenome

text: Philipps university of Marburg

text: TRUE

text: nectar

text: nectar

text: plant metagenome

text: not applicable

characteristic: sex

characteristic: title


text: UCSDMI

characteristic: INSDC last update

text: public

text: not applicable

characteristic: altitude

text: 2018-08-28 11:23

text: Peru

characteristic: country

text: plant nectar

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Plant (saline)

text: Plant secretion (saline)

text: tropical broadleaf forest biome

text: plant-associated habitat

text: plant nectar

text: plant-associated

text: Peru:Loreto:Fernando Lores

text: Peru

characteristic: geographic location (country and/or sea)

text: Marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: plant metagenome

characteristic: organism

text: Philipps university of Marburg

text: TRUE

text: nectar

text: nectar

text: plant metagenome

text: not applicable


characteristic: ENA-LAST-UPDATE

text: UCSDMI

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not applicable

characteristic: collection date

text: 2018-08-28 16:30

text: Peru

text: plant nectar

text: TRUE

text: Host-associated

text: Host-associated (saline)

text: Plant (saline)

text: Plant secretion (saline)

text: tropical broadleaf forest biome

text: plant-associated habitat

text: plant nectar

text: plant-associated

text: Peru:Loreto:Fernando Lores

text: Peru

characteristic: height

text: Marcgravia

characteristic: host scientific name

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: plant metagenome

text: Philipps university of Marburg

text: TRUE

text: nectar

text: nectar

text: plant metagenome

text: not applicable


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: not applicable

text: 2018-08-29 16:34

text: Peru

text: plant nectar

text: TRUE

text: Host-associated

text: Host-associated (saline)

text: Plant (saline)

text: Plant secretion (saline)

text: tropical broadleaf forest biome

text: plant-associated habitat

text: plant nectar

text: plant-associated

text: Peru:Loreto:Fernando Lores

text: Peru

text: Marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

characteristic: latitude

characteristic: longitude

text: plant metagenome

text: Philipps university of Marburg

text: TRUE

text: nectar

text: nectar

text: plant metagenome

text: not applicable


text: UCSDMI

characteristic: INSDC last update

text: public

text: not applicable

characteristic: altitude

text: 2018-08-28 11:16

text: Peru

characteristic: country

text: plant nectar

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Plant (saline)

text: Plant secretion (saline)

text: tropical broadleaf forest biome

text: plant-associated habitat

text: plant nectar

text: plant-associated

text: Peru:Loreto:Fernando Lores

text: Peru

text: Marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: plant metagenome

text: Philipps university of Marburg

text: TRUE

text: nectar

text: nectar

text: plant metagenome

text: not applicable

characteristic: sex

characteristic: title


characteristic: ENA-LAST-UPDATE

text: UCSDMI

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not applicable

characteristic: collection date

text: 2018-08-28 08:57

text: Peru

text: plant nectar

text: TRUE

text: Host-associated

text: Host-associated (saline)

text: Plant (saline)

text: Plant secretion (saline)

text: tropical broadleaf forest biome

text: plant-associated habitat

text: plant nectar

text: plant-associated

text: Peru:Loreto:Fernando Lores

text: Peru

characteristic: geographic location (country and/or sea)

text: Marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: plant metagenome

characteristic: organism

text: Philipps university of Marburg

text: TRUE

text: nectar

text: nectar

text: plant metagenome

text: not applicable


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: not applicable

text: 2018-08-28 09:02

text: Peru

text: plant nectar

text: TRUE

text: Host-associated

text: Host-associated (saline)

text: Plant (saline)

text: Plant secretion (saline)

text: tropical broadleaf forest biome

text: plant-associated habitat

text: plant nectar

text: plant-associated

text: Peru:Loreto:Fernando Lores

text: Peru

characteristic: height

text: Marcgravia

characteristic: host scientific name

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: plant metagenome

text: Philipps university of Marburg

text: TRUE

text: nectar

text: nectar

text: plant metagenome

text: not applicable


text: UCSDMI

characteristic: INSDC last update

text: public

text: not applicable

characteristic: altitude

text: 2018-08-30 13:58

text: Peru

characteristic: country

text: plant nectar

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Plant (saline)

text: Plant secretion (saline)

text: tropical broadleaf forest biome

text: plant-associated habitat

text: plant nectar

text: plant-associated

text: Peru:Loreto:Fernando Lores

text: Peru

text: Marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

characteristic: latitude

characteristic: longitude

text: plant metagenome

text: Philipps university of Marburg

text: TRUE

text: nectar

text: nectar

text: plant metagenome

text: not applicable


characteristic: ENA-LAST-UPDATE

text: UCSDMI

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not applicable

characteristic: collection date

text: 2018-08-29 16:38

text: Peru

text: plant nectar

text: TRUE

text: Host-associated

text: Host-associated (saline)

text: Plant (saline)

text: Plant secretion (saline)

text: tropical broadleaf forest biome

text: plant-associated habitat

text: plant nectar

text: plant-associated

text: Peru:Loreto:Fernando Lores

text: Peru

text: Marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: plant metagenome

text: Philipps university of Marburg

text: TRUE

text: nectar

text: nectar

text: plant metagenome

text: not applicable

characteristic: sex

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: not applicable

text: 2018-08-29 16:39

text: Peru

text: control blank

text: TRUE

text: Control

text: Negative

text: sterile water

text: Blank lysis solution

text: tropical broadleaf forest biome

text: research facility

text: sterile water

text: misc environment

text: Peru:Loreto:Fernando Lores

text: Peru

characteristic: geographic location (country and/or sea)

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: metagenome

characteristic: organism

text: Philipps university of Marburg

text: TRUE

text: control blank

text: control blank DNA extraction

text: metagenome

text: not applicable


text: UCSDMI

characteristic: INSDC last update

text: public

text: not applicable

characteristic: altitude

text: 2018-08-29 13:00

text: Peru

characteristic: country

text: plant nectar

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Plant (saline)

text: Plant secretion (saline)

text: tropical broadleaf forest biome

text: plant-associated habitat

text: plant nectar

text: plant-associated

text: Peru:Loreto:Fernando Lores

text: Peru

characteristic: height

text: Marcgravia

characteristic: host scientific name

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: plant metagenome

text: Philipps university of Marburg

text: TRUE

text: nectar

text: nectar

text: plant metagenome

text: not applicable


characteristic: ENA-LAST-UPDATE

text: UCSDMI

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not applicable

characteristic: collection date

text: 2018-08-23 16:15

text: Peru

text: plant nectar

text: TRUE

text: Host-associated

text: Host-associated (saline)

text: Plant (saline)

text: Plant secretion (saline)

text: tropical broadleaf forest biome

text: plant-associated habitat

text: plant nectar

text: plant-associated

text: Peru:Loreto:Fernando Lores

text: Peru

text: Marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

characteristic: latitude

characteristic: longitude

text: plant metagenome

text: Philipps university of Marburg

text: TRUE

text: nectar

text: nectar

text: plant metagenome

text: not applicable


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: not applicable

text: 2018-08-28 17:49

text: Peru

text: plant nectar

text: TRUE

text: Host-associated

text: Host-associated (saline)

text: Plant (saline)

text: Plant secretion (saline)

text: tropical broadleaf forest biome

text: plant-associated habitat

text: plant nectar

text: plant-associated

text: Peru:Loreto:Fernando Lores

text: Peru

text: Marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: plant metagenome

text: Philipps university of Marburg

text: TRUE

text: nectar

text: nectar

text: plant metagenome

text: not applicable

characteristic: sex

characteristic: title


text: UCSDMI

characteristic: INSDC last update

text: public

text: not applicable

characteristic: altitude

text: 2018-08-31 10:28

text: Peru

characteristic: country

text: plant nectar

characteristic: description

text: TRUE

characteristic: elevation

text: Host-associated

text: Host-associated (saline)

text: Plant (saline)

text: Plant secretion (saline)

text: tropical broadleaf forest biome

text: plant-associated habitat

text: plant nectar

text: plant-associated

text: Peru:Loreto:Fernando Lores

text: Peru

characteristic: geographic location (country and/or sea)

text: Marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: plant metagenome

characteristic: organism

text: Philipps university of Marburg

text: TRUE

text: nectar

text: nectar

text: plant metagenome

text: not applicable


characteristic: ENA-LAST-UPDATE

text: UCSDMI

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: not applicable

characteristic: collection date

text: 2018-08-30 14:01

text: Peru

text: plant nectar

text: TRUE

text: Host-associated

text: Host-associated (saline)

text: Plant (saline)

text: Plant secretion (saline)

text: tropical broadleaf forest biome

text: plant-associated habitat

text: plant nectar

text: plant-associated

text: Peru:Loreto:Fernando Lores

text: Peru

characteristic: height

text: Marcgravia

characteristic: host scientific name

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: plant metagenome

text: Philipps university of Marburg

text: TRUE

text: nectar

text: nectar

text: plant metagenome

text: not applicable


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UCSDMI

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: not applicable

text: 2018-08-29 13:08

text: Peru

text: plant nectar

text: TRUE

text: Host-associated

text: Host-associated (saline)

text: Plant (saline)

text: Plant secretion (saline)

text: tropical broadleaf forest biome

text: plant-associated habitat

text: plant nectar

text: plant-associated

text: Peru:Loreto:Fernando Lores

text: Peru

text: Marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: marcgravia

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

characteristic: latitude

characteristic: longitude

text: plant metagenome

text: Philipps university of Marburg

text: TRUE

text: nectar

text: nectar

text: plant metagenome

text: not applicable


characteristic: INSDC last update

text: public

tag: Namespace:Institute of Medical Virology, Zürich, Switzerland

text: SIB

characteristic: broker name

text: Universität Zürich, Zürich, Switzerland

characteristic: collecting institution

text: Verena Kufner, Maryam Zaheri, Stefan Schmutz, Kevin Steiner, Annette Audigé, Guido Bloemberg, Michael Huber, Alexandra Trkola

characteristic: collector name

text: Switzerland

text: ZH

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/ZH-UZH-IMV-47ff62cb/2024

characteristic: isolate

text: active surveillance not initiated by an outbreak

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Institute of Medical Virology, Zürich, Switzerland

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characteristic: INSDC status

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text: Universitäts-Kinderspital Zürich, Zürich, Switzerland

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: ZH

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c77d/2024

characteristic: organism


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

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text: SIB

characteristic: broker name

text: Universität Zürich, Zürich, Switzerland

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: ZH

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-47f91672/2024


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: SIB

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c847/2024

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

text: public

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characteristic: collection date

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characteristic: geographic location (country and/or sea)

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text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-47fb7346/2024

characteristic: organism


characteristic: ENA-CHECKLIST

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characteristic: INSDC last update

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characteristic: broker name

characteristic: collecting institution

characteristic: collector name

text: Switzerland

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characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

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text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c689/2024


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

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text: Switzerland

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text: Human

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characteristic: host sex

text: restricted access

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characteristic: isolate

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characteristic: collection date

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characteristic: geographic location (country and/or sea)

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text: Human

text: restricted access

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characteristic: host scientific name

text: restricted access

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characteristic: organism


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characteristic: broker name

characteristic: collecting institution

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characteristic: geographic location (region and locality)

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text: restricted access

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text: restricted access

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text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c659/2024


characteristic: ENA-CHECKLIST

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text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c643/2024

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text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c642/2024


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text: Verena Kufner, Maryam Zaheri, Stefan Schmutz, Kevin Steiner, Annette Audigé, Guido Bloemberg, Michael Huber, Alexandra Trkola

text: Switzerland

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text: restricted access

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text: restricted access

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text: hCoV-19/Switzerland/ZH-UZH-IMV-480363dd/2024

characteristic: organism

text: active surveillance not initiated by an outbreak


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text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c664/2024


characteristic: ENA-CHECKLIST

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text: restricted access

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text: restricted access

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text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c6c0/2024

characteristic: isolate

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characteristic: External Id

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text: SIB

text: Universität Zürich, Zürich, Switzerland

characteristic: collection date

text: Switzerland

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text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

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text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c97a/2024

text: Severe acute respiratory syndrome coronavirus 2

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text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c919/2024


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text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c76c/2024

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text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c680/2024


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text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c918/2024

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text: Human

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text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c72f/2024

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text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c63c/2024


characteristic: ENA-LAST-UPDATE

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text: public

text: SIB

text: UniversitätsSpital Zürich, Zürich, Switzerland

text: Verena Kufner, Maryam Zaheri, Stefan Schmutz, Kevin Steiner, Annette Audigé, Guido Bloemberg, Michael Huber, Alexandra Trkola

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

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text: hCoV-19/Switzerland/ZH-UZH-IMV-4801ae62/2024

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text: Universität Zürich, Zürich, Switzerland

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text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c93d/2024

characteristic: organism

text: active surveillance not initiated by an outbreak


characteristic: ENA-LAST-UPDATE

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text: Institute of Medical Virology, Zürich, Switzerland

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text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c70e/2024


characteristic: ENA-CHECKLIST

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text: Switzerland

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text: Human

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text: restricted access

characteristic: host sex

text: restricted access

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text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c6bf/2024

characteristic: isolate

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text: public

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characteristic: Submitter Id

text: SIB

text: Universität Zürich, Zürich, Switzerland

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: ZH

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c6e3/2024

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism


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characteristic: INSDC last update

text: public

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characteristic: broker name

text: Universität Zürich, Zürich, Switzerland

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characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

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text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-47f9d7a2/2024


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

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text: public

text: SIB

text: Universität Zürich, Zürich, Switzerland

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/ZH-UZH-IMV-47fbbdd6/2024

characteristic: isolate

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characteristic: ENA-FIRST-PUBLIC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: ZH

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c848/2024

characteristic: organism


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characteristic: collecting institution

characteristic: collector name

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text: SG

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characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/SG-UZH-IMV-3ba6c688/2024


characteristic: ENA-CHECKLIST

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text: public

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text: Universität Zürich, Zürich, Switzerland

text: Switzerland

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text: Human

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c644/2024

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text: public

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characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: ZH

text: Human

text: restricted access

text: Homo sapiens

characteristic: host scientific name

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c97b/2024

characteristic: organism


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characteristic: broker name

text: Universität Zürich, Zürich, Switzerland

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: ZH

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/ZH-UZH-IMV-3ba6c82f/2024


characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: SIB

text: Universität Zürich, Zürich, Switzerland

text: Verena Kufner, Maryam Zaheri, Stefan Schmutz, Kevin Steiner, Annette Audigé, Guido Bloemberg, Michael Huber, Alexandra Trkola

text: Switzerland

text: ZH

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/ZH-UZH-IMV-47f88883/2024

characteristic: isolate

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Anthony Smith, NICD

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Anthony Smith, NICD

characteristic: Submitter Id

text: EnteroBase

text: EnteroBase

text: A. Smith, National Institute for Communicable Diseases

characteristic: collection date

text: Whole genome sequencing data uploaded by EnteroBase user

characteristic: description

text: South Africa

characteristic: geographic location (country and/or sea)

text: Mpumalanga

text: Human, Blood culture

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Typhi

characteristic: serovar

characteristic: strain


characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: Anthony Smith, NICD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: EnteroBase

characteristic: broker name

text: EnteroBase

text: South Africa

text: Gauteng

characteristic: geographic location (region and locality)

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Typhi


E-MTAB-13737:Mouse 1 PBS Read 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

text: Graduate student

text: public

text: E-MTAB-13737:Mouse 1 PBS Read 1

tag: Namespace:Graduate student

text: ArrayExpress

text: melanoma cell

text: not collected

text: house mouse

characteristic: common name

text: Protocols: Before the experiment, the mice were adapted to the conditions of the vivarium, the period of adaptation was at least 2 weeks. The average weight of mice at the beginning of the experiment was 16.0 g.B16 melanoma cells were kindly provided by the Research Institute of Fundamental and Clinical Immunology (Novosibirsk, Russia).A melanoma model in the form of a subcutaneously growing node was created in 2 stages. Briefly, the first stage involved subcutaneous implantation of B16 melanoma cells into two mice. Then, having obtained tumor growth in the form of nodes in these mice, tumor nodes were isolated and crushed into cells, and then these melanoma cells were transplanted into all other animals. For subcutaneous implantation, thawed melanoma cells B16 in a concentration of 1x107 in a volume of 0.5 ml were injected subcutaneously in the form of a papule into the right side of the abdomen. After 2-3 weeks, the animals were sacrificed, and tumor nodes, the diameter of which was close to 2 cm, were removed under sterile conditions. Primary melanoma nodes were freed from stroma and other tissues, and then crushed with scalpels to a homogeneous suspension, adding Hanks’ medium (PanEko, Russia) to the tumor tissue in the final concentration 1:10. Cell transplantation consisted of subcutaneous injection of 0.5 ml of the resulting homogenate from the tumor in Hanks' solution into the right lateral surface of the abdomen of each mouse. Poly-A RNA Control Stock diluted with Poly-A RNA Control Dil Buffer from the GeneChip™ Poly-A RNA Control Kit (Applied Biosystems by Termo Fisher Scientific, Vilnius, Latvia) was used as an exogenous positive control. The required concentration of RNA, 250 ng/µl, was prepared on ice. A diluted Poly-A RNA Control Stock solution and nuclease-free water were added to the RNA. Next, the synthesis of the first strand of cDNA was performed, for which a mix for the synthesis of the first strand of DNA was added to the samples, consisting of First-Strand Buffer (Applied Biosystems by Termo Fisher Scientific, Vilnius, Latvia) and First-Strand Enzyme (Applied Biosystems by Termo Fisher Scientific, Vilnius, Latvia). The resulting solution was incubated in a thermal cycler for 1 hour at 25°C, then for 1 hour at 42°C, then 2 minutes at 4°C. The resulting single-stranded cDNA was converted to double-stranded cDNA by adding a second-strand synthesis mix consisting of Second-Strand Buffer (Applied Biosystems by Termo Fisher Scientific, Vilnius, Latvia) and Second-Strand Enzyme (Applied Biosystems by Termo Fisher Scientific, Vilnius) on ice. , Latvia). The resulting solution was incubated in a thermal cycler for 1 hour at 16°C, then for 10 minutes at 65°C, then 2 minutes at 4°C. After that, synthesis and amplification of cRNA were performed on a double-stranded DNA template at room temperature using IVT Buffer (Applied Biosystems by Termo Fisher Scientific, Vilnius, Latvia) and IVT Enzyme (Applied Biosystems by Termo Fisher Scientific, Vilnius, Latvia). The resulting solution was incubated in a thermal cycler for 16 hours at 40°C. The amplified cRNA was purified using magnetic beads (Purification Beads) (Applied Biosystems by Termo Fisher Scientific, Vilnius, Latvia) and a three-step wash with 80% ethanol. Magnetic particles were added to the test samples, which bind RNA and settle when placed on a magnetic plate. The settled magnetic particles were washed three times with 80% alcohol, after which the cRNA was eluted with nuclease-free water heated to 65°C. The concentration of isolated RNA was measured on a NanoDrop spectrophotometer. The cRNA samples were diluted to the required concentration (625 ng/µl) with nuclease-free water. 2nd-Cycle Primers (Applied Biosystems by Termo Fisher Scientific, Vilnius, Latvia) were added to the test samples, with which they were incubated in a thermal cycler for 5 minutes at 70°C, then for 5 minutes at 25°C, then 2 minutes at 4 °C. using reverse transcription reaction, cRNA was converted into cDNA using a mix for the synthesis of single-stranded cDNA of the 2nd cycle, which includes 2nd-Cycle ss-cDNA Buffer (Applied Biosystems by Termo Fisher Scientific, Vilnius, Latvia) and 2nd-Cycle ss-cDNA Enzyme (Applied Biosystems by Termo Fisher Scientific, Vilnius, Latvia). The resulting solution was incubated in a thermal cycler for 10 minutes at 25°C, then for 90 minutes at 42°C, then for 10 minutes at 70°C, then 2 minutes at 4°C. For hydrolysis of the cRNA, RNase H (Applied Biosystems by Termo Fisher Scientific, Vilnius, Latvia) was added to the resulting cDNA, with which the samples were incubated in a thermal cycler for 45 minutes at 37°C, then 5 minutes at 95°C, then 2 minutes at 4 °C After digestion, cycle 2 single strand cDNA was purified using magnetic beads and a three-step wash with 80% ethanol. Purified cDNA was fragmented with a fragmentation mix containing Nuclease Free Water, 10x cDNA Fragmentation Buffer, UDG, 10 U/μL, APE 1, 1,000 U/μL from the GeneChip™ WT Terminal Labeling Kit (Applied Biosystems by Termo Fisher Scientific, Vilnius , Latvia). The resulting solution was incubated in a thermal cycler for 1 hour at 37°C, then for 2 minutes at 93°C, then 2 minutes at 4°C. For transcriptome sequencing, library construction was carried out in several stages. First, to enrich the mRNA fraction according to the poly-A principle, particles with poly-T tails were used, to which 200 ng of total RNA was added. Next, the mRNA molecules were fragmented to small sizes. Reverse transcription was performed on these fragments using random primers. The second strand cDNA was synthesized with dUTP instead of dTTP. The resulting double-stranded cDNA was subjected to end repair and 3'-end polyadenylation. Adapter ligation was then performed. The next step was cleavage of the uracil-labeled second strand using the enzyme uracil DNA glycosylase (UDG), followed by PCR amplification.

text: adult

characteristic: developmental stage

text: melanoma

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: skin

characteristic: organism part

text: tumor

characteristic: sampling site

text: Mus musculus

text: Mouse 1 PBS Read 1

characteristic: title


E-MTAB-13737:Mouse 1 PBS Read 2

characteristic: ENA-LAST-UPDATE

text: Graduate student

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13737:Mouse 1 PBS Read 2

characteristic: Submitter Id

text: ArrayExpress

text: melanoma cell

text: not collected

characteristic: collection date

text: house mouse

characteristic: description

text: adult

text: melanoma

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: skin

text: tumor

text: Mus musculus

characteristic: strain

text: Mouse 1 PBS Read 2


E-MTAB-13737:Mouse 10 DTIC Read 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: Graduate student

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-13737:Mouse 10 DTIC Read 1

text: ArrayExpress

characteristic: broker name

text: melanoma cell

text: not collected

text: house mouse

characteristic: common name

text: adult

text: melanoma

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: skin

text: tumor

text: Mus musculus

text: Mouse 10 DTIC Read 1


E-MTAB-13737:Mouse 10 DTIC Read 2

characteristic: ENA-LAST-UPDATE

text: Graduate student

text: public

text: E-MTAB-13737:Mouse 10 DTIC Read 2

text: ArrayExpress

text: melanoma cell

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: melanoma

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: skin

characteristic: organism part

text: tumor

characteristic: sampling site

text: Mus musculus

text: Mouse 10 DTIC Read 2

characteristic: title


E-MTAB-13737:Mouse 2 PBS Read 1

text: Graduate student

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13737:Mouse 2 PBS Read 1

characteristic: Submitter Id

text: ArrayExpress

text: melanoma cell

text: not collected

characteristic: collection date

text: house mouse

characteristic: description

text: adult

text: melanoma

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: skin

text: tumor

text: Mus musculus

characteristic: strain

text: Mouse 2 PBS Read 1


E-MTAB-13737:Mouse 2 PBS Read 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: Graduate student

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-13737:Mouse 2 PBS Read 2

text: ArrayExpress

characteristic: broker name

text: melanoma cell

text: not collected

text: house mouse

characteristic: common name

text: adult

text: melanoma

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: skin

text: tumor

text: Mus musculus

text: Mouse 2 PBS Read 2


E-MTAB-13737:Mouse 3 PBS Read 1

characteristic: ENA-LAST-UPDATE

text: Graduate student

text: public

text: E-MTAB-13737:Mouse 3 PBS Read 1

text: ArrayExpress

text: melanoma cell

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: melanoma

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: skin

characteristic: organism part

text: tumor

characteristic: sampling site

text: Mus musculus

text: Mouse 3 PBS Read 1

characteristic: title


E-MTAB-13737:Mouse 3 PBS Read 2

text: Graduate student

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13737:Mouse 3 PBS Read 2

characteristic: Submitter Id

text: ArrayExpress

text: melanoma cell

text: not collected

characteristic: collection date

text: house mouse

characteristic: description

text: adult

text: melanoma

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: skin

text: tumor

text: Mus musculus

characteristic: strain

text: Mouse 3 PBS Read 2


E-MTAB-13737:Mouse 4 PBS Read 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: Graduate student

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-13737:Mouse 4 PBS Read 1

text: ArrayExpress

characteristic: broker name

text: melanoma cell

text: not collected

text: house mouse

characteristic: common name

text: adult

text: melanoma

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: skin

text: tumor

text: Mus musculus

text: Mouse 4 PBS Read 1


E-MTAB-13737:Mouse 4 PBS Read 2

characteristic: ENA-LAST-UPDATE

text: Graduate student

text: public

text: E-MTAB-13737:Mouse 4 PBS Read 2

text: ArrayExpress

text: melanoma cell

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: melanoma

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: skin

characteristic: organism part

text: tumor

characteristic: sampling site

text: Mus musculus

text: Mouse 4 PBS Read 2

characteristic: title


E-MTAB-13737:Mouse 5 PBS Read 1

text: Graduate student

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13737:Mouse 5 PBS Read 1

characteristic: Submitter Id

text: ArrayExpress

text: melanoma cell

text: not collected

characteristic: collection date

text: house mouse

characteristic: description

text: adult

text: melanoma

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: skin

text: tumor

text: Mus musculus

characteristic: strain

text: Mouse 5 PBS Read 1


E-MTAB-13737:Mouse 5 PBS Read 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: Graduate student

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-13737:Mouse 5 PBS Read 2

text: ArrayExpress

characteristic: broker name

text: melanoma cell

text: not collected

text: house mouse

characteristic: common name

text: adult

text: melanoma

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: skin

text: tumor

text: Mus musculus

text: Mouse 5 PBS Read 2


E-MTAB-13737:Mouse 6 DTIC Read 1

characteristic: ENA-LAST-UPDATE

text: Graduate student

text: public

text: E-MTAB-13737:Mouse 6 DTIC Read 1

text: ArrayExpress

text: melanoma cell

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: melanoma

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: skin

characteristic: organism part

text: tumor

characteristic: sampling site

text: Mus musculus

text: Mouse 6 DTIC Read 1

characteristic: title


E-MTAB-13737:Mouse 6 DTIC Read 2

text: Graduate student

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13737:Mouse 6 DTIC Read 2

characteristic: Submitter Id

text: ArrayExpress

text: melanoma cell

text: not collected

characteristic: collection date

text: house mouse

characteristic: description

text: adult

text: melanoma

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: skin

text: tumor

text: Mus musculus

characteristic: strain

text: Mouse 6 DTIC Read 2


E-MTAB-13737:Mouse 7 DTIC Read 1

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: Graduate student

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-13737:Mouse 7 DTIC Read 1

text: ArrayExpress

characteristic: broker name

text: melanoma cell

text: not collected

text: house mouse

characteristic: common name

text: adult

text: melanoma

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: skin

text: tumor

text: Mus musculus

text: Mouse 7 DTIC Read 1


E-MTAB-13737:Mouse 7 DTIC Read 2

characteristic: ENA-LAST-UPDATE

text: Graduate student

text: public

text: E-MTAB-13737:Mouse 7 DTIC Read 2

text: ArrayExpress

text: melanoma cell

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: melanoma

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: skin

characteristic: organism part

text: tumor

characteristic: sampling site

text: Mus musculus

text: Mouse 7 DTIC Read 2

characteristic: title


E-MTAB-13737:Mouse 8 DTIC Read 1

text: Graduate student

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13737:Mouse 8 DTIC Read 1

characteristic: Submitter Id

text: ArrayExpress

text: melanoma cell

text: not collected

characteristic: collection date

text: house mouse

characteristic: description

text: adult

text: melanoma

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: skin

text: tumor

text: Mus musculus

characteristic: strain

text: Mouse 8 DTIC Read 1


E-MTAB-13737:Mouse 8 DTIC Read 2

characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: Graduate student

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: E-MTAB-13737:Mouse 8 DTIC Read 2

text: ArrayExpress

characteristic: broker name

text: melanoma cell

text: not collected

text: house mouse

characteristic: common name

text: adult

text: melanoma

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: skin

text: tumor

text: Mus musculus

text: Mouse 8 DTIC Read 2


E-MTAB-13737:Mouse 9 DTIC Read 1

characteristic: ENA-LAST-UPDATE

text: Graduate student

text: public

text: E-MTAB-13737:Mouse 9 DTIC Read 1

text: ArrayExpress

text: melanoma cell

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: melanoma

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: skin

characteristic: organism part

text: tumor

characteristic: sampling site

text: Mus musculus

text: Mouse 9 DTIC Read 1

characteristic: title


E-MTAB-13737:Mouse 9 DTIC Read 2

text: Graduate student

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13737:Mouse 9 DTIC Read 2

characteristic: Submitter Id

text: ArrayExpress

text: melanoma cell

text: not collected

characteristic: collection date

text: house mouse

characteristic: description

text: adult

text: melanoma

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: skin

text: tumor

text: Mus musculus

characteristic: strain

text: Mouse 9 DTIC Read 2


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: UNIBE-IG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: dog

characteristic: common name

text: Scottish Deerhound

text: Switzerland

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Scottish Deerhound


characteristic: ENA-LAST-UPDATE

text: UNIBE-IG

text: public

text: dog

text: Welsh Corgi (Pembroke)

text: Switzerland

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Welsh Corgi (Pembroke)


text: UNIBE-IG

text: public

text: dog

text: Dachshund

text: Switzerland

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Dachshund

characteristic: title


text: UNIBE-IG

text: public

characteristic: INSDC status

text: dog

text: Rottweiler

text: Switzerland

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Rottweiler


text: UNIBE-IG

text: public

characteristic: SRA accession

text: dog

text: Miniature Schnauzer

text: Switzerland

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Miniature Schnauzer


text: UNIBE-IG

text: public

characteristic: Submitter Id

text: dog

text: Basset Hound

text: Switzerland

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Basset Hound


text: UNIBE-IG

text: public

characteristic: collection date

text: dog

text: Welsh Corgi (Cardigan)

text: Switzerland

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Welsh Corgi (Cardigan)


text: UNIBE-IG

text: public

text: dog

text: English Mastiff

characteristic: description

text: Switzerland

text: Canis lupus familiaris

text: Canis lupus familiaris

text: English Mastiff


text: UNIBE-IG

text: public

text: dog

text: Crossbred

text: Switzerland

characteristic: geographic location (country and/or sea)

text: Canis lupus familiaris

text: Canis lupus familiaris

text: Crossbred


text: UNIBE-IG

text: public

text: dog

text: Poodle (Miniature Poodle)

text: Switzerland

text: Canis lupus familiaris

characteristic: organism

text: Canis lupus familiaris

text: Poodle (Miniature Poodle)


text: HELLENIC CENTRE FOR MARINE RESEARCH

text: public

text: BelgiumCoast-AJJBC89-20210225-20210819-MF100

tag: Namespace:HELLENIC CENTRE FOR MARINE RESEARCH

text: Sample from the motile fraction (100 um) of the ARMS plates in AJJBC89

text: Yes

text: Belgium

text: Bruges

characteristic: geographic location (region and locality)

text: 51.64971, 2.789374

text: marine metagenome

text: marine metagenome


characteristic: ENA-CHECKLIST

text: HELLENIC CENTRE FOR MARINE RESEARCH

text: public

text: BelgiumCoast-AJJBC89-20210225-20210819-MF500

text: Sample from the motile fraction (500 um) of the ARMS plates in AJJBC89

text: Yes

text: Belgium

text: Bruges

text: 51.64971, 2.789374

text: marine metagenome

text: marine metagenome


characteristic: ENA-FIRST-PUBLIC

text: HELLENIC CENTRE FOR MARINE RESEARCH

text: public

text: BelgiumCoast-AJJBC89-20210225-20210819-SF40

text: Sample from the sessile fraction (40 um) of the ARMS plates in AJJBC89

text: Yes

text: Belgium

text: Bruges

text: 51.64971, 2.789374

text: marine metagenome

text: marine metagenome


characteristic: External Id

text: HELLENIC CENTRE FOR MARINE RESEARCH

text: public

text: BelgiumCoast-AJJCD78-20200506-20201012-MF500

text: Sample from the motile fraction (500 um) of the ARMS plates in AJJCD78

text: Yes

text: Belgium

text: Bruges

text: 51.65374944, 2.79602577

text: marine metagenome

text: marine metagenome


text: HELLENIC CENTRE FOR MARINE RESEARCH

characteristic: INSDC center name

text: public

text: BelgiumCoast-AJJCD78-20210225-20210819-MF100

text: Sample from the motile fraction (100 um) of the ARMS plates in AJJCD78

text: Yes

text: Belgium

text: Bruges

text: 51.65374944, 2.79602577

text: marine metagenome

text: marine metagenome