E-MTAB-13645_3:Sample 1568

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: B

characteristic: Primitive Streak Portion

characteristic: SRA accession

text: E-MTAB-13645_3:Sample 1568

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: embryonic tissue

characteristic: organism part

text: primitive streak

characteristic: sampling site

text: Mus musculus

text: Not recorded

characteristic: sex

text: Sample 1568


E-MTAB-13645_3:Sample 1569

status: PUBLIC

text: EB early bud

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: B

text: E-MTAB-13645_3:Sample 1569

tag: Namespace:MRC Laboratory of Molecular Biology

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

text: Protocols: Mouse embryos were collected under the UK Home Office project licence number PP9552402. Animals used in this study were 6-16 week-old wild type females of a mixed (CBAxC57BL/6)F2 background, maintained on a lighting regime of 14h light and 10h darkness with food and water supplied ad libitum. Following timed mating crosses between transgenic mTmG (B6.129(Cg)Gt(ROSA)26Sortm4(ACTB-tdTomato,-EGFP)Luo /J [Muzumdar et al., 2007]) males and wildtype females, females were killed 7 days after a vaginal plug was observed via a Schedule 1 method. The uterine tissue and the decidua were cut away to extract the E7 embryo. The Reichert’s membrane was peeled off and embryos were staged according to [Downs and Daviers, 1993]. Early bud (EB) stage embryos were taken for further analysis. For primitive streak dissections, the extra-embryonic part of the conceptus was cut off, the anterior and posterior embryonic portions were separated, and the posterior portion flattened out, taking care not to mix up the orientation. The posterior portion containing the primitive streak was cut at the halfway point and each half was halved again creating 4 similar-sized primitive streak segments. All embryo and primitive streak dissections were performed in Dulbecco’s Phosphate Buffered Saline (PBS; with CaCl2 and MgCl2, Gibco) supplemented with 10% FCS (Gibco), 50U/ml penicillin and 50U/ml streptomycin. For scRNA-seq of primitive streak cells, individual primitive streak regions were collected in separate Eppendorf tubes in FACS buffer (PBS without CaCl2 and MgCl2 (Gibco) supplemented with 10% FCS (Gibco), 50U/ml penicillin and 50U/ml streptomycin). After centrifugation at 200G for 5 min, tissues were resuspended in 200-250ul of TrypLE Express (Life Technologies) and incubated at 37C for 7 min with regular agitation and dissociated by pipetting. Cells were washed with 1ml of FACS buffer, centrifuged at 200G for 5min and resuspended in FACS buffer with Hoechst 33358 for sorting. In order to reduce cell loss from these small cell populations, wild type adult mouse thymocytes were added to the samples and were gated out based on their typical FSC-SSC profiles and absence of tdTomato expression. Each primitive streak region yielded on average 200 cells. Cells were kept on ice throughout the procedure. Individual cells were sorted directly into 96 well plates (Starlab E14031200) into 2.3ul of lysis buffer containing SUPERase-In RNase Inhibitor 20U/ul (Ambion, AM2694 ), 10% Triton X-100 (Sigma, 93443 ) and RNAse-free water. Plates were processed using a combination of Smart-Seq2 [Picelli et al., 2014] and mcSCRB-seq [Bagnoli et al., 2018] For detailed protocol see [Sturgess et al., 2021]. Single cells were lysed in a buffer that contains free dNTPs and oligo(dT)-tailed oligonucleotides with a universal 5'-anchor sequence. Following nucleic acid extraction, RT is performed, which adds 2–5 untemplated nucleotides to the cDNA 3′ end. A template-switching oligo (TSO) is added, carrying 2 riboguanosines and a modified guanosine to produce a locked nucleic acid (LNA) as the last base at the 3′ end. After the first-strand reaction, the cDNA is amplified using a limited number of cycles. Next, tagmentation is used to construct sequencing libraries quickly and efficiently from the amplified cDNA.

characteristic: description

text: E7.5+24h static culture

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1569

characteristic: title


E-MTAB-13645_3:Sample 1570

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: B

characteristic: Primitive Streak Portion

characteristic: SRA accession

text: E-MTAB-13645_3:Sample 1570

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: embryonic tissue

characteristic: organism part

text: primitive streak

characteristic: sampling site

text: Mus musculus

text: Not recorded

characteristic: sex

text: Sample 1570


E-MTAB-13645_3:Sample 1571

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: B

text: E-MTAB-13645_3:Sample 1571

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1571


E-MTAB-13645_3:Sample 1572

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: B

characteristic: Primitive Streak Portion

text: E-MTAB-13645_3:Sample 1572

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1572

characteristic: title


E-MTAB-13645_3:Sample 1573

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: B

characteristic: SRA accession

text: E-MTAB-13645_3:Sample 1573

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: embryonic tissue

characteristic: organism part

text: primitive streak

characteristic: sampling site

text: Mus musculus

text: Not recorded

characteristic: sex

text: Sample 1573


E-MTAB-13645_3:Sample 1574

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: B

characteristic: Primitive Streak Portion

text: E-MTAB-13645_3:Sample 1574

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1574


E-MTAB-13645_3:Sample 1575

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: B

text: E-MTAB-13645_3:Sample 1575

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1575

characteristic: title


E-MTAB-13645_3:Sample 1576

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: B

characteristic: Primitive Streak Portion

characteristic: SRA accession

text: E-MTAB-13645_3:Sample 1576

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: embryonic tissue

characteristic: organism part

text: primitive streak

characteristic: sampling site

text: Mus musculus

text: Not recorded

characteristic: sex

text: Sample 1576


E-MTAB-13645_3:Sample 1577

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: C

text: E-MTAB-13645_3:Sample 1577

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1577


E-MTAB-13645_3:Sample 1578

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: C

characteristic: Primitive Streak Portion

text: E-MTAB-13645_3:Sample 1578

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1578

characteristic: title


E-MTAB-13645_3:Sample 1579

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: C

characteristic: SRA accession

text: E-MTAB-13645_3:Sample 1579

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: embryonic tissue

characteristic: organism part

text: primitive streak

characteristic: sampling site

text: Mus musculus

text: Not recorded

characteristic: sex

text: Sample 1579


E-MTAB-13645_3:Sample 1580

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: C

characteristic: Primitive Streak Portion

text: E-MTAB-13645_3:Sample 1580

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1580


E-MTAB-13645_3:Sample 1581

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: C

text: E-MTAB-13645_3:Sample 1581

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1581

characteristic: title


E-MTAB-13645_3:Sample 1582

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: C

characteristic: Primitive Streak Portion

characteristic: SRA accession

text: E-MTAB-13645_3:Sample 1582

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: embryonic tissue

characteristic: organism part

text: primitive streak

characteristic: sampling site

text: Mus musculus

text: Not recorded

characteristic: sex

text: Sample 1582


E-MTAB-13645_3:Sample 1583

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: C

text: E-MTAB-13645_3:Sample 1583

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1583


E-MTAB-13645_3:Sample 1584

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: C

characteristic: Primitive Streak Portion

text: E-MTAB-13645_3:Sample 1584

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1584

characteristic: title


E-MTAB-13645_3:Sample 1585

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: C

characteristic: SRA accession

text: E-MTAB-13645_3:Sample 1585

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: embryonic tissue

characteristic: organism part

text: primitive streak

characteristic: sampling site

text: Mus musculus

text: Not recorded

characteristic: sex

text: Sample 1585


E-MTAB-13645_3:Sample 1586

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: C

characteristic: Primitive Streak Portion

text: E-MTAB-13645_3:Sample 1586

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1586


E-MTAB-13645_3:Sample 1587

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: C

text: E-MTAB-13645_3:Sample 1587

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1587

characteristic: title


E-MTAB-13645_3:Sample 1588

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: C

characteristic: Primitive Streak Portion

characteristic: SRA accession

text: E-MTAB-13645_3:Sample 1588

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: embryonic tissue

characteristic: organism part

text: primitive streak

characteristic: sampling site

text: Mus musculus

text: Not recorded

characteristic: sex

text: Sample 1588


E-MTAB-13645_3:Sample 1589

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: C

text: E-MTAB-13645_3:Sample 1589

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1589


E-MTAB-13645_3:Sample 1590

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: C

characteristic: Primitive Streak Portion

text: E-MTAB-13645_3:Sample 1590

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1590

characteristic: title


E-MTAB-13645_3:Sample 1591

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: C

characteristic: SRA accession

text: E-MTAB-13645_3:Sample 1591

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: embryonic tissue

characteristic: organism part

text: primitive streak

characteristic: sampling site

text: Mus musculus

text: Not recorded

characteristic: sex

text: Sample 1591


E-MTAB-13645_3:Sample 1592

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: C

characteristic: Primitive Streak Portion

text: E-MTAB-13645_3:Sample 1592

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1592


E-MTAB-13645_3:Sample 1593

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: C

text: E-MTAB-13645_3:Sample 1593

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1593

characteristic: title


E-MTAB-13645_3:Sample 1594

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: C

characteristic: Primitive Streak Portion

characteristic: SRA accession

text: E-MTAB-13645_3:Sample 1594

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: embryonic tissue

characteristic: organism part

text: primitive streak

characteristic: sampling site

text: Mus musculus

text: Not recorded

characteristic: sex

text: Sample 1594


E-MTAB-13645_3:Sample 1595

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: C

text: E-MTAB-13645_3:Sample 1595

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1595


E-MTAB-13645_3:Sample 1596

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: C

characteristic: Primitive Streak Portion

text: E-MTAB-13645_3:Sample 1596

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1596

characteristic: title


E-MTAB-13645_3:Sample 1597

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: C

characteristic: SRA accession

text: E-MTAB-13645_3:Sample 1597

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: embryonic tissue

characteristic: organism part

text: primitive streak

characteristic: sampling site

text: Mus musculus

text: Not recorded

characteristic: sex

text: Sample 1597


E-MTAB-13645_3:Sample 1598

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: C

characteristic: Primitive Streak Portion

text: E-MTAB-13645_3:Sample 1598

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1598


E-MTAB-13645_3:Sample 1599

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: C

text: E-MTAB-13645_3:Sample 1599

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1599

characteristic: title


E-MTAB-13645_3:Sample 1600

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: C

characteristic: Primitive Streak Portion

characteristic: SRA accession

text: E-MTAB-13645_3:Sample 1600

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: embryonic tissue

characteristic: organism part

text: primitive streak

characteristic: sampling site

text: Mus musculus

text: Not recorded

characteristic: sex

text: Sample 1600


E-MTAB-13645_3:Sample 1601

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: C

text: E-MTAB-13645_3:Sample 1601

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1601


E-MTAB-13645_3:Sample 1602

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: C

characteristic: Primitive Streak Portion

text: E-MTAB-13645_3:Sample 1602

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1602

characteristic: title


E-MTAB-13645_3:Sample 1603

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: C

characteristic: SRA accession

text: E-MTAB-13645_3:Sample 1603

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: embryonic tissue

characteristic: organism part

text: primitive streak

characteristic: sampling site

text: Mus musculus

text: Not recorded

characteristic: sex

text: Sample 1603


E-MTAB-13645_3:Sample 1604

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: C

characteristic: Primitive Streak Portion

text: E-MTAB-13645_3:Sample 1604

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1604


E-MTAB-13645_3:Sample 1605

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: C

text: E-MTAB-13645_3:Sample 1605

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1605

characteristic: title


E-MTAB-13645_3:Sample 1606

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: C

characteristic: Primitive Streak Portion

characteristic: SRA accession

text: E-MTAB-13645_3:Sample 1606

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: embryonic tissue

characteristic: organism part

text: primitive streak

characteristic: sampling site

text: Mus musculus

text: Not recorded

characteristic: sex

text: Sample 1606


E-MTAB-13645_3:Sample 1607

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: C

text: E-MTAB-13645_3:Sample 1607

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1607


E-MTAB-13645_3:Sample 1608

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: C

characteristic: Primitive Streak Portion

text: E-MTAB-13645_3:Sample 1608

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1608

characteristic: title


E-MTAB-13645_3:Sample 1609

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: C

characteristic: SRA accession

text: E-MTAB-13645_3:Sample 1609

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: embryonic tissue

characteristic: organism part

text: primitive streak

characteristic: sampling site

text: Mus musculus

text: Not recorded

characteristic: sex

text: Sample 1609


E-MTAB-13645_3:Sample 1610

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: C

characteristic: Primitive Streak Portion

text: E-MTAB-13645_3:Sample 1610

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1610


E-MTAB-13645_3:Sample 1611

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: C

text: E-MTAB-13645_3:Sample 1611

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1611

characteristic: title


E-MTAB-13645_3:Sample 1612

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: C

characteristic: Primitive Streak Portion

characteristic: SRA accession

text: E-MTAB-13645_3:Sample 1612

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: embryonic tissue

characteristic: organism part

text: primitive streak

characteristic: sampling site

text: Mus musculus

text: Not recorded

characteristic: sex

text: Sample 1612


E-MTAB-13645_3:Sample 1613

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: C

text: E-MTAB-13645_3:Sample 1613

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1613


E-MTAB-13645_3:Sample 1614

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: C

characteristic: Primitive Streak Portion

text: E-MTAB-13645_3:Sample 1614

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1614

characteristic: title


E-MTAB-13645_3:Sample 1615

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: C

characteristic: SRA accession

text: E-MTAB-13645_3:Sample 1615

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: embryonic tissue

characteristic: organism part

text: primitive streak

characteristic: sampling site

text: Mus musculus

text: Not recorded

characteristic: sex

text: Sample 1615


E-MTAB-13645_3:Sample 1616

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: C

characteristic: Primitive Streak Portion

text: E-MTAB-13645_3:Sample 1616

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: description

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1616


E-MTAB-13645_3:Sample 1617

text: EB early bud

characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: MRC Laboratory of Molecular Biology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Pool

text: C

text: E-MTAB-13645_3:Sample 1617

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: embryonic tissue

text: primitive streak

text: Mus musculus

text: Not recorded

text: Sample 1617

characteristic: title


E-MTAB-13645_3:Sample 1618

text: EB early bud

characteristic: Anatomical region in static culture

characteristic: Batch

characteristic: ENA-FIRST-PUBLIC

text: MRC Laboratory of Molecular Biology

text: public

characteristic: INSDC status

text: Pool

characteristic: Individual

text: C

characteristic: Primitive Streak Portion

characteristic: SRA accession

text: E-MTAB-13645_3:Sample 1618

text: ArrayExpress

text: not collected

text: house mouse

text: E7.5+24h static culture

text: wild type genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: embryonic tissue

characteristic: organism part

text: primitive streak

characteristic: sampling site

text: Mus musculus

text: Not recorded

characteristic: sex

text: Sample 1618


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

tag: Namespace:Latvian Biomedical Research and Study Centre

characteristic: Submitter Id

text: blood

characteristic: collection date

text: sheep

characteristic: common name

text: Latvian local darkhead sheep

characteristic: description

text: Latvia

text: Ovis aries

text: Ovis aries

text: female

text: Latvian local darkhead sheep

characteristic: variety


characteristic: ENA-FIRST-PUBLIC

text: Latvian Biomedical Research and Study Centre

text: public

characteristic: INSDC status

text: blood

text: sheep

text: Latvian local darkhead sheep

text: Latvia

characteristic: geographic location (country and/or sea)

text: Ovis aries

characteristic: organism

text: Ovis aries

text: female

characteristic: title

text: Latvian local darkhead sheep


text: public

characteristic: SRA accession

text: blood

text: sheep

text: Latvian local darkhead sheep

text: Latvia

text: Ovis aries

text: Ovis aries

text: male

characteristic: sex

text: Latvian local darkhead sheep


characteristic: ENA-CHECKLIST

characteristic: ENA-LAST-UPDATE

text: UNIVERSITY OF OXFORD

text: public

tag: Namespace:UNIVERSITY OF OXFORD

text: University of Oxford

characteristic: collecting institution

text: Modernising Medical Microbiology

characteristic: collector name

text: United Kingdom

text: human

characteristic: host common name

text: not collected

characteristic: host health state

text: Homo sapien

characteristic: host scientific name

text: not collected

characteristic: host sex

text: not collected

characteristic: host subject id

text: RT-PCR

characteristic: influenza test method

text: P

characteristic: influenza test result

text: A

characteristic: influenza virus type

text: Influenza A virus

text: not applicable

characteristic: other pathogens test result

characteristic: other pathogens tested

text: Influenza A virus

characteristic: serotype (required for a seropositive sample)

text: Influenza genome sequencing


characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SC

characteristic: broker name

text: Rosalind Franklin Laboratory

characteristic: collection date

text: not provided

text: Samples prepared at Rosalind Franklin Laboratory by Donald Fraser, Suki Lee, Rob Howes, The Rosalind Franklin Laboratory and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: Human

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EBI

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: common name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458609 of study SRP349508.

text: plastisphere

characteristic: environmental medium

text: USA

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: plastisphere metagenome

text: sea

characteristic: local environmental context

text: plastisphere metagenome

characteristic: metagenomic source

text: uncultured Thalassobacter sp.

text: NextSeq 500 sequencing: Metagenomic analyses of Mature Plastic Biofilm

characteristic: project name

characteristic: sample derived from

text: uncultured Thalassobacter sp.

text: NextSeq 500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17458609_metabat2_12_1705322952


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

characteristic: collection date

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458618 of study SRP349508.

characteristic: description

text: plastisphere

text: USA

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: plastisphere metagenome

text: sea

text: plastisphere metagenome

text: uncultured Serratia sp.

characteristic: organism

text: uncultured Serratia sp.

text: NextSeq 500

text: multi-marker approach

text: Metagenome-assembled genome: SRR17458618_metabat2_14_1705322952

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EBI

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: common name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458623 of study SRP349508.

text: plastisphere

characteristic: environmental medium

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: plastisphere metagenome

text: sea

characteristic: local environmental context

text: plastisphere metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured bacterium

text: NextSeq 500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17458623_binner23_7_1705322952


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: description

text: plastisphere

text: USA

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: plastisphere metagenome

text: sea

text: plastisphere metagenome

text: uncultured Gammaproteobacteria bacterium

characteristic: organism

text: NextSeq 500

text: multi-marker approach

text: Metagenome-assembled genome: SRR17458623_binner12_27_1705322952

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EBI

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: common name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458603 of study SRP349508.

text: plastisphere

characteristic: environmental medium

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: plastisphere metagenome

text: sea

characteristic: local environmental context

text: plastisphere metagenome

characteristic: metagenomic source

text: uncultured Dokdonia sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Dokdonia sp.

text: NextSeq 500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17458603_concoct_1_1705322953


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

characteristic: collection date

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458625 of study SRP349508.

characteristic: description

text: plastisphere

text: USA

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: plastisphere metagenome

text: sea

text: plastisphere metagenome

text: Thalassolituus oleivorans

characteristic: organism

text: Thalassolituus oleivorans

text: NextSeq 500

text: multi-marker approach

text: Metagenome-assembled genome: SRR17458625_maxbin2_1_1705322953

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EBI

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: common name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458630 of study SRP349508.

text: plastisphere

characteristic: environmental medium

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: plastisphere metagenome

text: sea

characteristic: local environmental context

text: plastisphere metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured bacterium

text: NextSeq 500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17458630_binner123_3_1705322953


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

characteristic: collection date

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458628 of study SRP349508.

characteristic: description

text: plastisphere

text: USA

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: plastisphere metagenome

text: sea

text: plastisphere metagenome

text: uncultured Nonlabens sp.

characteristic: organism

text: uncultured Nonlabens sp.

text: NextSeq 500

text: multi-marker approach

text: Metagenome-assembled genome: SRR17458628_binner12_1_1705322953

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EBI

text: public

text: default

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: common name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: plastisphere

characteristic: environmental medium

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: plastisphere metagenome

text: sea

characteristic: local environmental context

text: plastisphere metagenome

characteristic: metagenomic source

text: uncultured Hydrogenophaga sp.

text: NextSeq 500 sequencing: Metagenomic analyses of Mature Plastic Biofilm

characteristic: project name

characteristic: sample derived from

text: uncultured Hydrogenophaga sp.

text: NextSeq 500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17458625_concoct_24_1705322954


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

characteristic: collection date

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458614 of study SRP349508.

characteristic: description

text: plastisphere

text: USA

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: plastisphere metagenome

text: sea

text: plastisphere metagenome

text: uncultured Altererythrobacter sp.

characteristic: organism

text: uncultured Altererythrobacter sp.

text: NextSeq 500

text: multi-marker approach

text: Metagenome-assembled genome: SRR17458614_concoct_62_1705322954

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EBI

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: common name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458632 of study SRP349508.

text: plastisphere

characteristic: environmental medium

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: plastisphere metagenome

text: sea

characteristic: local environmental context

text: plastisphere metagenome

characteristic: metagenomic source

text: uncultured Spongiivirga sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Spongiivirga sp.

text: NextSeq 500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17458632_concoct_26_1705322954


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

characteristic: collection date

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458624 of study SRP349508.

characteristic: description

text: plastisphere

text: USA

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: plastisphere metagenome

text: sea

text: plastisphere metagenome

text: uncultured Pirellulales bacterium

characteristic: organism

text: uncultured Pirellulales bacterium

text: NextSeq 500

text: multi-marker approach

text: Metagenome-assembled genome: SRR17458624_concoct_12_1705322954

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EBI

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: common name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458605 of study SRP349508.

text: plastisphere

characteristic: environmental medium

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: plastisphere metagenome

text: sea

characteristic: local environmental context

text: plastisphere metagenome

characteristic: metagenomic source

text: uncultured Leptolyngbya sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Leptolyngbya sp.

text: NextSeq 500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17458605_binner13_20_1705322954


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

characteristic: collection date

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458609 of study SRP349508.

characteristic: description

text: plastisphere

text: USA

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: plastisphere metagenome

text: sea

text: plastisphere metagenome

text: uncultured Parvularcula sp.

characteristic: organism

text: uncultured Parvularcula sp.

text: NextSeq 500

text: multi-marker approach

text: Metagenome-assembled genome: SRR17458609_metabat2_5_1705322954

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EBI

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: common name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: plastisphere

characteristic: environmental medium

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: plastisphere metagenome

text: sea

characteristic: local environmental context

text: plastisphere metagenome

characteristic: metagenomic source

text: uncultured Hyphomicrobiaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Hyphomicrobiaceae bacterium

text: NextSeq 500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17458632_concoct_43_1705322954


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

characteristic: collection date

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458613 of study SRP349508.

characteristic: description

text: plastisphere

text: USA

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: plastisphere metagenome

text: sea

text: plastisphere metagenome

text: uncultured Hyphomonadaceae bacterium

characteristic: organism

text: uncultured Hyphomonadaceae bacterium

text: NextSeq 500

text: multi-marker approach

text: Metagenome-assembled genome: SRR17458613_binner23_7_1705322956

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EBI

text: public

text: default

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: common name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458634 of study SRP349508.

text: plastisphere

characteristic: environmental medium

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: plastisphere metagenome

text: sea

characteristic: local environmental context

text: plastisphere metagenome

characteristic: metagenomic source

text: uncultured Microscillaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Microscillaceae bacterium

text: NextSeq 500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17458634_maxbin2_7_1705322956


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

characteristic: collection date

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458639 of study SRP349508.

characteristic: description

text: plastisphere

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: plastisphere metagenome

text: sea

text: plastisphere metagenome

text: uncultured Saccharospirillaceae bacterium

characteristic: organism

text: NextSeq 500 sequencing: Metagenomic analyses of Mature Plastic Biofilm

text: NextSeq 500

text: multi-marker approach

text: Metagenome-assembled genome: SRR17458639_binner12_1_1705322956

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EBI

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: common name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458630 of study SRP349508.

text: plastisphere

characteristic: environmental medium

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: plastisphere metagenome

text: sea

characteristic: local environmental context

text: plastisphere metagenome

characteristic: metagenomic source

text: uncultured Hyphomicrobiaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Hyphomicrobiaceae bacterium

text: NextSeq 500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17458630_binner13_5_1705322957


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

characteristic: collection date

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458612 of study SRP349508.

characteristic: description

text: plastisphere

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: plastisphere metagenome

text: sea

text: plastisphere metagenome

text: uncultured Gammaproteobacteria bacterium

characteristic: organism

text: NextSeq 500

text: multi-marker approach

text: Metagenome-assembled genome: SRR17458612_concoct_29_1705322957

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EBI

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: common name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458621 of study SRP349508.

text: plastisphere

characteristic: environmental medium

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: plastisphere metagenome

text: sea

characteristic: local environmental context

text: plastisphere metagenome

characteristic: metagenomic source

text: uncultured Marinobacter sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Marinobacter sp.

text: NextSeq 500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17458621_binner123_1_1705322957


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

characteristic: collection date

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458646 of study SRP349508.

characteristic: description

text: plastisphere

text: USA

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: plastisphere metagenome

text: sea

text: plastisphere metagenome

text: uncultured Chromatiales bacterium

characteristic: organism

text: uncultured Chromatiales bacterium

text: NextSeq 500

text: multi-marker approach

text: Metagenome-assembled genome: SRR17458646_binner123_14_1705322957

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EBI

text: public

text: default

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: common name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458609 of study SRP349508.

text: plastisphere

characteristic: environmental medium

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: plastisphere metagenome

text: sea

characteristic: local environmental context

text: plastisphere metagenome

characteristic: metagenomic source

text: uncultured Alphaproteobacteria bacterium

characteristic: project name

characteristic: sample derived from

text: NextSeq 500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17458609_binner123_16_1705322958


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

characteristic: collection date

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458625 of study SRP349508.

characteristic: description

text: plastisphere

text: USA

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: plastisphere metagenome

text: sea

text: plastisphere metagenome

text: uncultured Sphingomonadales bacterium

characteristic: organism

text: uncultured Sphingomonadales bacterium

text: NextSeq 500

text: multi-marker approach

text: Metagenome-assembled genome: SRR17458625_concoct_31_1705322958

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EBI

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: common name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458645 of study SRP349508.

text: plastisphere

characteristic: environmental medium

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: plastisphere metagenome

text: sea

characteristic: local environmental context

text: plastisphere metagenome

characteristic: metagenomic source

text: uncultured Roseitalea sp.

text: NextSeq 500 sequencing: Metagenomic analyses of Mature Plastic Biofilm

characteristic: project name

characteristic: sample derived from

text: uncultured Roseitalea sp.

text: NextSeq 500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17458645_concoct_21_1705322958


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: description

text: plastisphere

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: plastisphere metagenome

text: sea

text: plastisphere metagenome

text: uncultured Cytophagales bacterium

characteristic: organism

text: uncultured Cytophagales bacterium

text: NextSeq 500

text: multi-marker approach

text: Metagenome-assembled genome: SRR17458645_concoct_29_1705322958

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EBI

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: common name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: plastisphere

characteristic: environmental medium

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: plastisphere metagenome

text: sea

characteristic: local environmental context

text: plastisphere metagenome

characteristic: metagenomic source

text: uncultured Parvularculaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Parvularculaceae bacterium

text: NextSeq 500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17458645_metabat2_11_1705322959


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

characteristic: collection date

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458637 of study SRP349508.

characteristic: description

text: plastisphere

text: USA

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: plastisphere metagenome

text: sea

text: plastisphere metagenome

text: uncultured Gammaproteobacteria bacterium

characteristic: organism

text: NextSeq 500

text: multi-marker approach

text: Metagenome-assembled genome: SRR17458637_binner23_1_1705322959

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EBI

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: common name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458640 of study SRP349508.

text: plastisphere

characteristic: environmental medium

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: plastisphere metagenome

text: sea

characteristic: local environmental context

text: plastisphere metagenome

characteristic: metagenomic source

text: uncultured Flavobacteriaceae bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Flavobacteriaceae bacterium

text: NextSeq 500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17458640_concoct_13_1705322959


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

text: water

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: description

text: plastisphere

text: USA

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: plastisphere metagenome

text: sea

text: plastisphere metagenome

characteristic: organism

text: NextSeq 500

text: multi-marker approach

text: Metagenome-assembled genome: SRR17458637_binner12_7_1705322959

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EBI

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: common name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458603 of study SRP349508.

text: plastisphere

characteristic: environmental medium

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: plastisphere metagenome

text: sea

characteristic: local environmental context

text: plastisphere metagenome

characteristic: metagenomic source

characteristic: project name

characteristic: sample derived from

text: NextSeq 500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17458603_binner123_17_1705322960


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

characteristic: collection date

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458623 of study SRP349508.

characteristic: description

text: plastisphere

text: USA

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: plastisphere metagenome

text: sea

text: plastisphere metagenome

text: uncultured Hyphomicrobiales bacterium

characteristic: organism

text: uncultured Hyphomicrobiales bacterium

text: NextSeq 500

text: multi-marker approach

text: Metagenome-assembled genome: SRR17458623_binner13_1_1705322960

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EBI

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: common name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458625 of study SRP349508.

text: plastisphere

characteristic: environmental medium

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: plastisphere metagenome

text: sea

characteristic: local environmental context

text: plastisphere metagenome

characteristic: metagenomic source

text: Yeosuana marina

characteristic: project name

characteristic: sample derived from

text: Yeosuana marina

text: NextSeq 500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17458625_concoct_38_1705322963


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

characteristic: collection date

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458645 of study SRP349508.

characteristic: description

text: plastisphere

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: plastisphere metagenome

text: sea

text: plastisphere metagenome

text: uncultured Pirellulaceae bacterium

characteristic: organism

text: NextSeq 500 sequencing: Metagenomic analyses of Mature Plastic Biofilm

text: uncultured Pirellulaceae bacterium

text: NextSeq 500

text: multi-marker approach

text: Metagenome-assembled genome: SRR17458645_metabat2_5_1705322963

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EBI

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: common name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: plastisphere

characteristic: environmental medium

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: plastisphere metagenome

text: sea

characteristic: local environmental context

text: plastisphere metagenome

characteristic: metagenomic source

text: uncultured Pseudoalteromonas sp.

characteristic: project name

characteristic: sample derived from

text: uncultured Pseudoalteromonas sp.

text: NextSeq 500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17458603_concoct_27_1705322964


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

characteristic: collection date

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458643 of study SRP349508.

characteristic: description

text: plastisphere

text: USA

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: plastisphere metagenome

text: sea

text: plastisphere metagenome

text: uncultured Parvularculaceae bacterium

characteristic: organism

text: uncultured Parvularculaceae bacterium

text: NextSeq 500

text: multi-marker approach

text: Metagenome-assembled genome: SRR17458643_binner23_9_1705322964

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EBI

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: common name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458612 of study SRP349508.

text: plastisphere

characteristic: environmental medium

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: plastisphere metagenome

text: sea

characteristic: local environmental context

text: plastisphere metagenome

characteristic: metagenomic source

text: uncultured Cytophagales bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured Cytophagales bacterium

text: NextSeq 500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17458612_binner123_7_1705322964


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

text: water

text: EBI-EMG

characteristic: broker name

characteristic: collection date

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458605 of study SRP349508.

characteristic: description

text: plastisphere

text: USA

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: plastisphere metagenome

text: sea

text: plastisphere metagenome

text: uncultured Bacteroidia bacterium

characteristic: organism

text: uncultured Bacteroidia bacterium

text: NextSeq 500

text: multi-marker approach

text: Metagenome-assembled genome: SRR17458605_binner12_1_1705322964

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EBI

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: common name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458634 of study SRP349508.

text: plastisphere

characteristic: environmental medium

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: plastisphere metagenome

text: sea

characteristic: local environmental context

text: plastisphere metagenome

characteristic: metagenomic source

text: uncultured Alphaproteobacteria bacterium

characteristic: project name

characteristic: sample derived from

text: NextSeq 500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17458634_concoct_44_1705322965


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

characteristic: collection date

characteristic: description

text: plastisphere

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: plastisphere metagenome

text: sea

text: plastisphere metagenome

text: uncultured Gammaproteobacteria bacterium

characteristic: organism

text: NextSeq 500

text: multi-marker approach

text: Metagenome-assembled genome: SRR17458634_concoct_59_1705322965

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: EBI

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: common name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: plastisphere

characteristic: environmental medium

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: plastisphere metagenome

text: sea

characteristic: local environmental context

text: plastisphere metagenome

characteristic: metagenomic source

characteristic: project name

characteristic: sample derived from

text: NextSeq 500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR17458612_binner123_10_1705322965


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: EBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

characteristic: collection date

text: This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR17458609 of study SRP349508.

characteristic: description

text: plastisphere

text: USA

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: plastisphere metagenome

text: sea

text: plastisphere metagenome

text: uncultured Candidatus Melainabacteria bacterium

characteristic: organism

text: NextSeq 500 sequencing: Metagenomic analyses of Mature Plastic Biofilm

text: NextSeq 500

text: multi-marker approach

text: Metagenome-assembled genome: SRR17458609_binner23_13_1705322966

characteristic: title