status: PUBLIC

characteristic: ENA first public

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: External Id

text: CENTER FOR GENOMIC REGULATION (CRG)

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text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:CENTER FOR GENOMIC REGULATION (CRG)

characteristic: Submitter Id

text: house mouse

characteristic: common name

characteristic: description

text: Mus musculus

characteristic: organism

text: Mus musculus

characteristic: title


text: Rueda-M,N

text: public

text: Colombia

characteristic: geographic location (country and/or sea)

text: Heliconius sara

text: Heliconius sara

text: Female

characteristic: sex


text: public

tag: Namespace:Max Planck Institute for Evolutionary Anthropology

text: Donor whole saliva for inoculate

text: Netherlands

text: Leiden

characteristic: geographic location (region and locality)

text: human saliva metagenome

text: human saliva metagenome


text: Max Planck Institute for Evolutionary Anthropology

text: public

text: Donor whole saliva for inoculate

text: Netherlands

text: Leiden

text: human saliva metagenome

text: human saliva metagenome


text: public

text: In vitro oral biofilm sample

text: Netherlands

text: Leiden

text: human oral metagenome

text: human oral metagenome


text: public

text: In vitro dental calculus

text: Netherlands

text: Leiden

text: human oral metagenome

text: human oral metagenome


text: public

text: negative control library blank

text: Germany

text: Thuringia, Jena

text: blank sample

text: blank sample


text: public

tag: Namespace:Center for Research in Transplantation and Translational Immunology

text: all single viable and Cd69+ Cd44+ cells from lung

text: house mouse

text: Resident T cells expressing Cd69 and/or Cd44 were sorted from lung before or after non-lethal pneumonia

text: Cell sorting was acquired according to single and viable characteristics and the expression of Cd69 and/or Cd44

text: Mus musculus

text: Mus musculus

text: C57 black 6

characteristic: strain

text: Pulmonary resident T cells


text: Max Planck Institute for Evolutionary Biology

text: ena-SAMPLE-TAB-07-10-2023-11:34:22:380-6804

characteristic: collection date

text: house mouse

text: Male brain sample from Germany population; Reared under natural environment

text: Adult

text: Germany

text: Mus musculus

text: Mus musculus

text: M

text: M.m.dom

text: Brain


text: ena-SAMPLE-TAB-07-10-2023-11:34:22:380-6805

text: house mouse

text: Adult

text: Germany

text: Mus musculus

text: Mus musculus

text: M

text: M.m.dom

text: Brain


text: ena-SAMPLE-TAB-07-10-2023-11:34:22:380-6806

text: house mouse

text: Adult

text: Germany

text: Mus musculus

text: Mus musculus

text: M

text: M.m.dom

text: Brain


text: ena-SAMPLE-TAB-07-10-2023-11:34:22:380-6807

text: house mouse

text: Adult

text: Germany

text: Mus musculus

text: Mus musculus

text: M

text: M.m.dom

text: Brain


text: ena-SAMPLE-TAB-07-10-2023-11:34:22:380-6808

text: house mouse

text: Adult

text: Germany

text: Mus musculus

text: Mus musculus

text: M

text: M.m.dom

text: Brain


text: ena-SAMPLE-TAB-07-10-2023-11:34:22:380-6809

text: house mouse

text: Adult

text: Germany

text: Mus musculus

text: Mus musculus

text: M

text: M.m.dom

text: Brain


text: ena-SAMPLE-TAB-07-10-2023-11:34:22:380-6810

text: house mouse

text: Adult

text: Germany

text: Mus musculus

text: Mus musculus

text: M

text: M.m.dom

text: Brain


text: ena-SAMPLE-TAB-07-10-2023-11:34:22:380-6811

text: house mouse

text: Adult

text: Germany

text: Mus musculus

text: Mus musculus

text: M

text: M.m.dom

text: Brain


text: ena-SAMPLE-TAB-07-10-2023-11:34:22:380-6812

text: house mouse

text: Adult

text: Germany

text: Mus musculus

text: Mus musculus

text: M

text: M.m.dom

text: Brain


text: ena-SAMPLE-TAB-07-10-2023-11:34:22:380-6813

text: house mouse

text: Adult

text: Germany

text: Mus musculus

text: Mus musculus

text: M

text: M.m.dom

text: Brain


characteristic: ENA first public

text: public

tag: Namespace:Zurich University of Applied Sciences (ZHAW), School of Life Sciences and Facility Management, Institute of Natural Resource Sciences

text: Commercial soil

characteristic: broad-scale environmental context

text: Chitin, week 2, replica 1

text: Peat substrate

characteristic: environmental medium

text: Belgium

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Greenhouse

characteristic: local environmental context

text: metagenome

text: V3, V4 region from Klindworth et al.

characteristic: pcr primers

text: Chitinomix, Soil metabaracoding data for 16S and ITS regions of lettuce rhizosphere grown in potting substrate and greenhouse soil with or withouth chitin amendment

characteristic: project name

text: metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: 16S rRNA gene

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text: V3, V4

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characteristic: ENA-CHECKLIST

characteristic: External Id

text: Zurich University of Applied Sciences (ZHAW), School of Life Sciences and Facility Management, Institute of Natural Resource Sciences

characteristic: INSDC center name

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characteristic: SRA accession

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text: Commercial soil

text: Chitin, week 2, replica 2

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characteristic: organism

text: V3, V4 region from Klindworth et al.

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text: Illumina MiSeq

text: 16S rRNA gene

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characteristic: title


characteristic: ENA first public

text: public

text: Commercial soil

characteristic: broad-scale environmental context

characteristic: collection date

text: Chitin, week 2, replica 3

text: Peat substrate

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Greenhouse

text: metagenome

text: V3, V4 region from Klindworth et al.

text: metagenome

text: Illumina MiSeq

text: 16S rRNA gene

text: V3, V4


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text: public

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text: Chitin, week 4, replica 1

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text: V3, V4 region from Klindworth et al.

characteristic: pcr primers

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text: Commercial soil

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text: V3, V4 region from Klindworth et al.

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text: V3, V4


characteristic: ENA first public

text: public

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characteristic: collection date

text: Chitin, week 4, replica 1

text: Greenhouse soil

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characteristic: geographic location (country and/or sea)

text: Greenhouse

text: metagenome

characteristic: organism

text: V3, V4 region from Klindworth et al.

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text: Illumina MiSeq

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characteristic: ENA-CHECKLIST

text: public

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text: metagenome

text: V3, V4 region from Klindworth et al.

characteristic: pcr primers

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text: Commercial soil

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text: V3, V4 region from Klindworth et al.

text: metagenome

text: Illumina MiSeq

text: 16S rRNA gene

characteristic: target gene

text: V3, V4

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characteristic: ENA first public

text: public

characteristic: Submitter Id

text: Commercial soil

characteristic: broad-scale environmental context

characteristic: collection date

text: Chitin, week 6, replica 3

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text: Peat substrate

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

text: Greenhouse

text: metagenome

text: V3, V4 region from Klindworth et al.

text: metagenome

text: Illumina MiSeq

text: 16S rRNA gene

text: V3, V4


characteristic: ENA-CHECKLIST

text: public

text: Commercial soil

text: Chitin, week 6, replica 1

text: Greenhouse soil

text: Belgium

characteristic: geographic location (latitude)

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text: Greenhouse

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text: metagenome

characteristic: organism

text: V3, V4 region from Klindworth et al.

characteristic: pcr primers

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text: Illumina MiSeq

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text: V3, V4

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text: V3, V4 region from Klindworth et al.

characteristic: project name

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characteristic: sequencing method

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characteristic: ENA first public

text: public

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text: Commercial soil

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text: Chitin, week 8, replica 1

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text: V3, V4 region from Klindworth et al.

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text: Illumina MiSeq

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characteristic: target gene

text: V3, V4

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characteristic: environmental medium

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

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text: Greenhouse

characteristic: local environmental context

text: metagenome

characteristic: organism

text: V3, V4 region from Klindworth et al.

text: metagenome

text: Illumina MiSeq

text: 16S rRNA gene

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characteristic: External Id

characteristic: INSDC center name

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characteristic: pcr primers

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text: Illumina MiSeq

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text: Commercial soil

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characteristic: project name

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characteristic: ENA-CHECKLIST

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text: Chitin, week 4, replica 2

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characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Greenhouse

text: metagenome

text: V3, V4 region from Klindworth et al.

text: metagenome

text: Illumina MiSeq

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characteristic: target gene

text: V3, V4

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characteristic: External Id

characteristic: INSDC center name

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text: V3, V4 region from Klindworth et al.

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text: Illumina MiSeq

text: 16S rRNA gene

text: V3, V4


characteristic: ENA first public

text: public

characteristic: Submitter Id

text: Commercial soil

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text: Chitin, week 6, replica 2

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text: Peat substrate

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text: Greenhouse

text: metagenome

text: V3, V4 region from Klindworth et al.

characteristic: pcr primers

text: metagenome

text: Illumina MiSeq

text: 16S rRNA gene

text: V3, V4

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characteristic: ENA-CHECKLIST

text: public

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characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Greenhouse

text: metagenome

text: V3, V4 region from Klindworth et al.

characteristic: project name

text: metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: 16S rRNA gene

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characteristic: External Id

characteristic: INSDC center name

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text: Belgium

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text: V3, V4 region from Klindworth et al.

text: metagenome

text: Illumina MiSeq

text: 16S rRNA gene

characteristic: target gene

text: V3, V4

characteristic: target subfragment


characteristic: ENA first public

text: public

characteristic: Submitter Id

text: Commercial soil

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characteristic: collection date

text: Chitin, week 8, replica 2

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text: Greenhouse soil

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characteristic: local environmental context

text: metagenome

characteristic: organism

text: V3, V4 region from Klindworth et al.

text: metagenome

text: Illumina MiSeq

text: 16S rRNA gene

text: V3, V4


characteristic: ENA-CHECKLIST

text: public

text: Commercial soil

text: Untreated, week 2, replica 2

text: Peat substrate

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Greenhouse

text: metagenome

text: V3, V4 region from Klindworth et al.

characteristic: pcr primers

text: metagenome

text: Illumina MiSeq

text: 16S rRNA gene

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characteristic: External Id

characteristic: INSDC center name

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text: Commercial soil

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text: metagenome

text: V3, V4 region from Klindworth et al.

characteristic: project name

text: metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: 16S rRNA gene

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characteristic: ENA first public

text: public

characteristic: Submitter Id

text: Commercial soil

characteristic: broad-scale environmental context

characteristic: collection date

text: Untreated, week 2, replica 1

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text: Greenhouse soil

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text: metagenome

text: V3, V4 region from Klindworth et al.

text: metagenome

text: Illumina MiSeq

text: 16S rRNA gene

characteristic: target gene

text: V3, V4

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characteristic: ENA-CHECKLIST

text: public

text: Commercial soil

text: Untreated, week 2, replica 2

text: Greenhouse soil

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Greenhouse

characteristic: local environmental context

text: metagenome

characteristic: organism

text: V3, V4 region from Klindworth et al.

text: metagenome

text: Illumina MiSeq

text: 16S rRNA gene

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characteristic: External Id

characteristic: INSDC center name

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characteristic: SRA accession

text: Commercial soil

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text: Greenhouse soil

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text: metagenome

text: V3, V4 region from Klindworth et al.

characteristic: pcr primers

text: metagenome

text: Illumina MiSeq

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characteristic: ENA first public

text: public

characteristic: Submitter Id

text: Commercial soil

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characteristic: collection date

text: Untreated, week 4, replica 3

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text: Peat substrate

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text: V3, V4 region from Klindworth et al.

characteristic: project name

text: metagenome

text: Illumina MiSeq

characteristic: sequencing method

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characteristic: ENA-CHECKLIST

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text: Commercial soil

text: Untreated, week 4, replica 1

text: Greenhouse soil

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Greenhouse

text: metagenome

text: V3, V4 region from Klindworth et al.

text: metagenome

text: Illumina MiSeq

text: 16S rRNA gene

characteristic: target gene

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characteristic: INSDC center name

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characteristic: INSDC status

characteristic: SRA accession

text: Commercial soil

text: Untreated, week 4, replica 2

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characteristic: local environmental context

text: metagenome

characteristic: organism

text: V3, V4 region from Klindworth et al.

text: metagenome

text: Illumina MiSeq

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characteristic: ENA first public

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characteristic: Submitter Id

text: Commercial soil

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text: Untreated, week 4, replica 3

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text: metagenome

text: V3, V4 region from Klindworth et al.

characteristic: pcr primers

text: metagenome

text: Illumina MiSeq

text: 16S rRNA gene

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characteristic: ENA-CHECKLIST

text: public

text: Commercial soil

text: Untreated, week 6, replica 1

text: Peat substrate

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Greenhouse

text: metagenome

text: V3, V4 region from Klindworth et al.

characteristic: project name

text: metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: 16S rRNA gene

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characteristic: External Id

characteristic: INSDC center name

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characteristic: INSDC status

characteristic: SRA accession

text: Commercial soil

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text: Peat substrate

text: Belgium

text: Greenhouse

text: metagenome

text: V3, V4 region from Klindworth et al.

text: metagenome

text: Illumina MiSeq

text: 16S rRNA gene

characteristic: target gene

text: V3, V4

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characteristic: ENA first public

text: public

characteristic: Submitter Id

text: Commercial soil

characteristic: broad-scale environmental context

characteristic: collection date

text: Untreated, week 6, replica 3

characteristic: description

text: Peat substrate

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characteristic: local environmental context

text: metagenome

characteristic: organism

text: V3, V4 region from Klindworth et al.

text: metagenome

text: Illumina MiSeq

text: 16S rRNA gene

text: V3, V4


characteristic: ENA-CHECKLIST

text: public

text: Commercial soil

text: Untreated, week 6, replica 1

text: Greenhouse soil

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Greenhouse

text: metagenome

text: V3, V4 region from Klindworth et al.

characteristic: pcr primers

text: metagenome

text: Illumina MiSeq

text: 16S rRNA gene

text: V3, V4

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Commercial soil

text: Untreated, week 6, replica 2

text: Greenhouse soil

text: Belgium

text: Greenhouse

text: metagenome

text: V3, V4 region from Klindworth et al.

characteristic: project name

text: metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: 16S rRNA gene

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characteristic: ENA first public

text: public

characteristic: Submitter Id

text: Commercial soil

characteristic: broad-scale environmental context

characteristic: collection date

text: Untreated, week 6, replica 3

characteristic: description

text: Greenhouse soil

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text: Greenhouse

text: metagenome

text: V3, V4 region from Klindworth et al.

text: metagenome

text: Illumina MiSeq

text: 16S rRNA gene

characteristic: target gene

text: V3, V4

characteristic: target subfragment


characteristic: ENA-CHECKLIST

text: public

text: Commercial soil

text: Untreated, week 8, replica 1

text: Peat substrate

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Greenhouse

characteristic: local environmental context

text: metagenome

characteristic: organism

text: V3, V4 region from Klindworth et al.

text: metagenome

text: Illumina MiSeq

text: 16S rRNA gene

text: V3, V4


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

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characteristic: INSDC status

characteristic: SRA accession

text: Commercial soil

text: Untreated, week 8, replica 2

text: Peat substrate

text: Belgium

text: Greenhouse

text: metagenome

text: V3, V4 region from Klindworth et al.

characteristic: pcr primers

text: metagenome

text: Illumina MiSeq

text: 16S rRNA gene

text: V3, V4

characteristic: title


characteristic: ENA first public

text: public

characteristic: Submitter Id

text: Commercial soil

characteristic: broad-scale environmental context

characteristic: collection date

text: Untreated, week 8, replica 3

characteristic: description

text: Peat substrate

text: Belgium

text: Greenhouse

text: metagenome

text: V3, V4 region from Klindworth et al.

characteristic: project name

text: metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: 16S rRNA gene

text: V3, V4


characteristic: ENA-CHECKLIST

text: public

text: Commercial soil

text: Untreated, week 8, replica 1

text: Greenhouse soil

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Greenhouse

text: metagenome

text: V3, V4 region from Klindworth et al.

text: metagenome

text: Illumina MiSeq

text: 16S rRNA gene

characteristic: target gene

text: V3, V4

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characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Commercial soil

text: Untreated, week 8, replica 2

text: Greenhouse soil

text: Belgium

text: Greenhouse

characteristic: local environmental context

text: metagenome

characteristic: organism

text: V3, V4 region from Klindworth et al.

text: metagenome

text: Illumina MiSeq

text: 16S rRNA gene

text: V3, V4


characteristic: ENA first public

text: public

characteristic: Submitter Id

text: Commercial soil

characteristic: broad-scale environmental context

characteristic: collection date

text: Untreated, week 8, replica 3

characteristic: description

text: Greenhouse soil

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text: Greenhouse

text: metagenome

text: V3, V4 region from Klindworth et al.

characteristic: pcr primers

text: metagenome

text: Illumina MiSeq

text: 16S rRNA gene

text: V3, V4

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: Commercial soil

text: Untreated, week 4, replica 2

text: Peat substrate

characteristic: environmental medium

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text: ITS1-F and ITS2 primers from Bellemain et al.

characteristic: project name

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characteristic: External Id

characteristic: INSDC center name

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text: Internal Transcribed Spacer


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text: public

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text: Chitin, week 2, replica 2

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text: Greenhouse

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text: Internal Transcribed Spacer


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text: public

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text: Commercial soil

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text: Untreated, week 2, replica 1

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text: Internal Transcribed Spacer

characteristic: target gene

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text: public

text: Commercial soil

text: Untreated, week 2, replica 2

text: Greenhouse soil

characteristic: environmental medium

text: Belgium

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Greenhouse

characteristic: local environmental context

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characteristic: organism

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text: Internal Transcribed Spacer


characteristic: External Id

characteristic: INSDC center name

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text: Commercial soil

text: Untreated, week 2, replica 3

text: Greenhouse soil

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characteristic: pcr primers

text: metagenome

text: Illumina MiSeq

text: Internal Transcribed Spacer

characteristic: title


characteristic: ENA first public

text: Ifremer

text: public

characteristic: Submitter Id

text: 16S rRNA

text: 5'-CTTTCCCTACACGACGCTCTTCCGATCT-3' ; 5'-GGAGTTCAGACGTGTGCTCTTCCGATCT-3'

characteristic: adapters

text: hydrothermal vent

characteristic: broad-scale environmental context

text: SeBiMER

characteristic: broker name

text: ifremer

characteristic: collecting institution

characteristic: collection date

text: crustacean metagenome

characteristic: common name

unit: m

characteristic: depth

text: adult

text: organ

text: host-associated

characteristic: environmental package

text: yes

text: Atlantic Ocean

text: Mid-Atlantic Ridge

characteristic: geographic location (region and locality)

characteristic: investigation type

characteristic: isolate

text: hydrothermal vent

text: arthropoda

text: CGGGAG

characteristic: multiplex identifiers

text: crustacean metagenome

text: WHOI341 : 5'-CCTACGGGNGGCWGCAG-3 ; WHOI785 : 5-GACTACHVGGGTATCTAATCC-3

characteristic: project name

text: 16S partial rRNA (V3-V4) of Rimicaris chacei gonad symbionts, adult from Snake Pit, amplified by Direct PCR.

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: gonad

text: 16S partial rRNA (V3-V4) of Rimicaris chacei gonad symbionts, specimen choro01


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA

text: hydrothermal vent

text: SeBiMER

text: ifremer

text: crustacean metagenome

text: adult

text: organ

characteristic: environmental medium

text: host-associated

text: yes

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mid-Atlantic Ridge

text: hydrothermal vent

text: arthropoda

characteristic: local environmental context

text: TGGTAG

text: crustacean metagenome

characteristic: organism

characteristic: pcr primers

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: gonad

text: 16S partial rRNA (V3-V4) of Rimicaris chacei gonad symbionts, specimen choro02

characteristic: title


characteristic: ENA first public

text: Ifremer

text: public

characteristic: Submitter Id

text: 16S rRNA

characteristic: adapters

text: hydrothermal vent

characteristic: broad-scale environmental context

text: SeBiMER

characteristic: broker name

text: ifremer

characteristic: collecting institution

characteristic: collection date

text: crustacean metagenome

characteristic: common name

characteristic: depth

text: adult

text: organ

text: host-associated

characteristic: environmental package

text: yes

text: Atlantic Ocean

text: Mid-Atlantic Ridge

characteristic: geographic location (region and locality)

characteristic: investigation type

characteristic: isolate

text: hydrothermal vent

text: arthropoda

text: CACCCA

characteristic: multiplex identifiers

text: crustacean metagenome

characteristic: project name

text: 16S partial rRNA (V3-V4) of Rimicaris chacei gonad symbionts, adult from TAG, amplified by Direct PCR.

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: gonad

text: 16S partial rRNA (V3-V4) of Rimicaris chacei gonad symbionts, specimen choro08


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA

text: hydrothermal vent

text: SeBiMER

text: ifremer

text: crustacean metagenome

text: adult

text: organ

characteristic: environmental medium

text: host-associated

text: yes

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mid-Atlantic Ridge

text: hydrothermal vent

text: arthropoda

characteristic: local environmental context

text: GGTGTT

text: crustacean metagenome

characteristic: organism

characteristic: pcr primers

text: 16S partial rRNA (V3-V4) of Rimicaris chacei hepatopancreas symbionts, adult from Snake Pit, amplified by Direct PCR.

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: hepatopancreas

text: 16S partial rRNA (V3-V4) of Rimicaris chacei hepatopancreas symbionts, specimen Cr023

characteristic: title


characteristic: ENA first public

text: Ifremer

text: public

characteristic: Submitter Id

text: 16S rRNA

characteristic: adapters

text: hydrothermal vent

characteristic: broad-scale environmental context

text: SeBiMER

characteristic: broker name

text: ifremer

characteristic: collecting institution

characteristic: collection date

text: crustacean metagenome

characteristic: common name

characteristic: depth

text: adult

text: organ

text: host-associated

characteristic: environmental package

text: yes

text: Atlantic Ocean

text: Mid-Atlantic Ridge

characteristic: geographic location (region and locality)

characteristic: investigation type

characteristic: isolate

text: hydrothermal vent

text: arthropoda

text: GTTTCT

characteristic: multiplex identifiers

text: crustacean metagenome

characteristic: project name

text: 16S partial rRNA (V3-V4) of Rimicaris chacei hepatopancreas symbionts, adult from TAG, amplified by Direct PCR.

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: hepatopancreas

text: 16S partial rRNA (V3-V4) of Rimicaris chacei hepatopancreas symbionts, specimen Cr116


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA

text: hydrothermal vent

text: SeBiMER

text: ifremer

text: crustacean metagenome

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text: organ

characteristic: environmental medium

text: host-associated

text: yes

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mid-Atlantic Ridge

text: hydrothermal vent

text: arthropoda

characteristic: local environmental context

text: GTGGGG

text: crustacean metagenome

characteristic: organism

characteristic: pcr primers

text: 16S partial rRNA (V3-V4) of Rimicaris chacei hepatopancreas symbionts, adult from TAG, amplified by Nested PCR.

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: hepatopancreas

text: 16S partial rRNA (V3-V4) of Rimicaris chacei hepatopancreas symbionts, specimen Cr118

characteristic: title


characteristic: ENA first public

text: Ifremer

text: public

characteristic: Submitter Id

text: 16S rRNA

characteristic: adapters

text: hydrothermal vent

characteristic: broad-scale environmental context

text: SeBiMER

characteristic: broker name

text: ifremer

characteristic: collecting institution

characteristic: collection date

text: crustacean metagenome

characteristic: common name

characteristic: depth

text: adult

text: organ

text: host-associated

characteristic: environmental package

text: yes

text: Atlantic Ocean

text: Mid-Atlantic Ridge

characteristic: geographic location (region and locality)

characteristic: investigation type

characteristic: isolate

text: hydrothermal vent

text: arthropoda

text: ACACGC

characteristic: multiplex identifiers

text: crustacean metagenome

characteristic: project name

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: hepatopancreas

text: 16S partial rRNA (V3-V4) of Rimicaris chacei hepatopancreas symbionts, specimen Cr120


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA

text: hydrothermal vent

text: SeBiMER

text: ifremer

text: crustacean metagenome

text: adult

text: organ

characteristic: environmental medium

text: host-associated

text: yes

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mid-Atlantic Ridge

text: hydrothermal vent

text: arthropoda

characteristic: local environmental context

text: ACAAAA

text: crustacean metagenome

characteristic: organism

characteristic: pcr primers

text: 16S partial rRNA (V3-V4) of Rimicaris chacei gills symbionts, adult from Snake Pit, amplified by Direct PCR.

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: gills

text: 16S partial rRNA (V3-V4) of Rimicaris chacei gills symbionts, specimen Cr024

characteristic: title


characteristic: ENA first public

text: Ifremer

text: public

characteristic: Submitter Id

text: 16S rRNA

characteristic: adapters

text: hydrothermal vent

characteristic: broad-scale environmental context

text: SeBiMER

characteristic: broker name

text: ifremer

characteristic: collecting institution

characteristic: collection date

text: crustacean metagenome

characteristic: common name

characteristic: depth

text: adult

text: organ

text: host-associated

characteristic: environmental package

text: yes

text: Atlantic Ocean

text: Mid-Atlantic Ridge

characteristic: geographic location (region and locality)

characteristic: investigation type

characteristic: isolate

text: hydrothermal vent

text: arthropoda

text: CTCCAG

characteristic: multiplex identifiers

text: crustacean metagenome

characteristic: project name

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: gills

text: 16S partial rRNA (V3-V4) of Rimicaris chacei gills symbionts, specimen Cr025


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA

text: 5'-CTTTCCCTACACGACGCTCTTCCGATCT-3' ; 5'-GGAGTTCAGACGTGTGCTCTTCCGATCT-3'

text: hydrothermal vent

text: SeBiMER

text: ifremer

text: crustacean metagenome

text: adult

text: organ

characteristic: environmental medium

text: host-associated

text: yes

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mid-Atlantic Ridge

text: hydrothermal vent

text: arthropoda

characteristic: local environmental context

text: AACCGA

text: crustacean metagenome

characteristic: organism

characteristic: pcr primers

text: 16S partial rRNA (V3-V4) of Rimicaris chacei gills symbionts, adult from TAG, amplified by Direct PCR.

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: gills

text: 16S partial rRNA (V3-V4) of Rimicaris chacei gills symbionts, specimen Cr116

characteristic: title


characteristic: ENA first public

text: Ifremer

text: public

characteristic: Submitter Id

text: 16S rRNA

characteristic: adapters

text: hydrothermal vent

characteristic: broad-scale environmental context

text: SeBiMER

characteristic: broker name

text: ifremer

characteristic: collecting institution

characteristic: collection date

text: crustacean metagenome

characteristic: common name

characteristic: depth

text: adult

text: organ

text: host-associated

characteristic: environmental package

text: yes

text: Atlantic Ocean

text: Mid-Atlantic Ridge

characteristic: geographic location (region and locality)

characteristic: investigation type

characteristic: isolate

text: hydrothermal vent

text: arthropoda

text: GGCAAT

characteristic: multiplex identifiers

text: crustacean metagenome

text: WHOI341 : 5'-CCTACGGGNGGCWGCAG-3 ; WHOI785 : 5-GACTACHVGGGTATCTAATCC-3

characteristic: project name

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: gills

text: 16S partial rRNA (V3-V4) of Rimicaris chacei gills symbionts, specimen Cr118


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA

text: hydrothermal vent

text: SeBiMER

text: ifremer

text: crustacean metagenome

text: adult

text: organ

characteristic: environmental medium

text: host-associated

text: yes

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mid-Atlantic Ridge

text: hydrothermal vent

text: arthropoda

characteristic: local environmental context

text: TGCGGG

text: crustacean metagenome

characteristic: organism

characteristic: pcr primers

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata gills symbionts, adult from Snake Pit, amplified by Direct PCR.

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: gills

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata gills symbionts, specimen MG8

characteristic: title


characteristic: ENA first public

text: Ifremer

text: public

characteristic: Submitter Id

text: 16S rRNA

characteristic: adapters

text: hydrothermal vent

characteristic: broad-scale environmental context

text: SeBiMER

characteristic: broker name

text: ifremer

characteristic: collecting institution

characteristic: collection date

text: crustacean metagenome

characteristic: common name

characteristic: depth

text: adult

text: organ

text: host-associated

characteristic: environmental package

text: yes

text: Atlantic Ocean

text: Mid-Atlantic Ridge

characteristic: geographic location (region and locality)

characteristic: investigation type

characteristic: isolate

text: hydrothermal vent

text: arthropoda

text: AGAGGG

characteristic: multiplex identifiers

text: crustacean metagenome

characteristic: project name

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata hepatopancreas symbionts, adult from Snake Pit, amplified by Direct PCR.

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: hepatopancreas

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata hepatopancreas symbionts, specimen MG8


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA

text: hydrothermal vent

text: SeBiMER

text: ifremer

text: crustacean metagenome

text: adult

text: organ

characteristic: environmental medium

text: host-associated

text: yes

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mid-Atlantic Ridge

text: hydrothermal vent

text: arthropoda

characteristic: local environmental context

text: TCTATG

text: crustacean metagenome

characteristic: organism

characteristic: pcr primers

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: gills

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata gills symbionts, specimen MG7

characteristic: title


characteristic: ENA first public

text: Ifremer

text: public

characteristic: Submitter Id

text: 16S rRNA

characteristic: adapters

text: hydrothermal vent

characteristic: broad-scale environmental context

text: SeBiMER

characteristic: broker name

text: ifremer

characteristic: collecting institution

characteristic: collection date

text: crustacean metagenome

characteristic: common name

characteristic: depth

text: adult

text: organ

text: host-associated

characteristic: environmental package

text: yes

text: Atlantic Ocean

text: Mid-Atlantic Ridge

characteristic: geographic location (region and locality)

characteristic: investigation type

characteristic: isolate

text: hydrothermal vent

text: arthropoda

text: ATGAAC

characteristic: multiplex identifiers

text: crustacean metagenome

characteristic: project name

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: hepatopancreas

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata hepatopancreas symbionts, specimen MG7


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA

text: hydrothermal vent

text: SeBiMER

text: ifremer

text: crustacean metagenome

text: subadult

text: organ

characteristic: environmental medium

text: host-associated

text: yes

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mid-Atlantic Ridge

text: hydrothermal vent

text: arthropoda

characteristic: local environmental context

text: GAACAC

text: crustacean metagenome

characteristic: organism

characteristic: pcr primers

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata cephalothoracic cavity symbionts, subadult from TAG, amplified by Direct PCR.

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: cephalothorax

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata cephalothoracic cavity symbionts, specimen Juv3D

characteristic: title


characteristic: ENA first public

text: Ifremer

text: public

characteristic: Submitter Id

text: 16S rRNA

characteristic: adapters

text: hydrothermal vent

characteristic: broad-scale environmental context

text: SeBiMER

characteristic: broker name

text: ifremer

characteristic: collecting institution

characteristic: collection date

text: crustacean metagenome

characteristic: common name

characteristic: depth

text: subadult

text: organ

text: host-associated

characteristic: environmental package

text: yes

text: Atlantic Ocean

text: Mid-Atlantic Ridge

characteristic: geographic location (region and locality)

characteristic: investigation type

characteristic: isolate

text: hydrothermal vent

text: arthropoda

text: CTCATA

characteristic: multiplex identifiers

text: crustacean metagenome

characteristic: project name

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata gills symbionts, subadult from TAG, amplified by Direct PCR.

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: gills

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata gills symbionts, specimen Juv3D


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA

text: hydrothermal vent

text: SeBiMER

text: ifremer

text: crustacean metagenome

text: subadult

text: organ

characteristic: environmental medium

text: host-associated

text: yes

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mid-Atlantic Ridge

text: hydrothermal vent

text: arthropoda

characteristic: local environmental context

text: CTAGGA

text: crustacean metagenome

characteristic: organism

characteristic: pcr primers

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata foregut symbionts, subadult from TAG, amplified by Direct PCR.

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: foregut

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata foregut symbionts, specimen Juv3D

characteristic: title


characteristic: ENA first public

text: Ifremer

text: public

characteristic: Submitter Id

text: 16S rRNA

text: 5'-CTTTCCCTACACGACGCTCTTCCGATCT-3' ; 5'-GGAGTTCAGACGTGTGCTCTTCCGATCT-3'

characteristic: adapters

text: hydrothermal vent

characteristic: broad-scale environmental context

text: SeBiMER

characteristic: broker name

text: ifremer

characteristic: collecting institution

characteristic: collection date

text: crustacean metagenome

characteristic: common name

characteristic: depth

text: subadult

text: organ

text: host-associated

characteristic: environmental package

text: yes

text: Atlantic Ocean

text: Mid-Atlantic Ridge

characteristic: geographic location (region and locality)

characteristic: investigation type

characteristic: isolate

text: hydrothermal vent

text: arthropoda

text: TGCCAG

characteristic: multiplex identifiers

text: crustacean metagenome

characteristic: project name

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata midgut tube symbionts, subadult from TAG, amplified by Direct PCR.

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: midgut tube

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata midgut tube symbionts, specimen Juv3D


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA

text: hydrothermal vent

text: SeBiMER

text: ifremer

text: crustacean metagenome

text: adult

text: organ

characteristic: environmental medium

text: host-associated

text: yes

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mid-Atlantic Ridge

text: hydrothermal vent

text: arthropoda

characteristic: local environmental context

text: CCTCTT

text: crustacean metagenome

characteristic: organism

text: WHOI341 : 5'-CCTACGGGNGGCWGCAG-3 ; WHOI785 : 5-GACTACHVGGGTATCTAATCC-3

characteristic: pcr primers

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata gonad symbionts, adult from TAG, amplified by Direct PCR.

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: gonad

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata gonad symbionts, specimen MG1

characteristic: title


characteristic: ENA first public

text: Ifremer

text: public

characteristic: Submitter Id

text: 16S rRNA

characteristic: adapters

text: hydrothermal vent

characteristic: broad-scale environmental context

text: SeBiMER

characteristic: broker name

text: ifremer

characteristic: collecting institution

characteristic: collection date

text: crustacean metagenome

characteristic: common name

characteristic: depth

text: adult

text: organ

text: host-associated

characteristic: environmental package

text: yes

text: Atlantic Ocean

text: Mid-Atlantic Ridge

characteristic: geographic location (region and locality)

characteristic: investigation type

characteristic: isolate

text: hydrothermal vent

text: arthropoda

text: TCCCCA

characteristic: multiplex identifiers

text: crustacean metagenome

characteristic: project name

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata gonad symbionts, adult from TAG, amplified by Nested PCR.

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: gonad


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA

text: hydrothermal vent

text: SeBiMER

text: ifremer

text: crustacean metagenome

text: adult

text: organ

characteristic: environmental medium

text: host-associated

text: yes

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mid-Atlantic Ridge

text: hydrothermal vent

text: arthropoda

characteristic: local environmental context

text: CTAGAG

text: crustacean metagenome

characteristic: organism

characteristic: pcr primers

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata gills symbionts, adult from TAG, amplified by Direct PCR.

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: gills

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata gills symbionts, specimen MG1

characteristic: title


characteristic: ENA first public

text: Ifremer

text: public

characteristic: Submitter Id

text: 16S rRNA

characteristic: adapters

text: hydrothermal vent

characteristic: broad-scale environmental context

text: SeBiMER

characteristic: broker name

text: ifremer

characteristic: collecting institution

characteristic: collection date

text: crustacean metagenome

characteristic: common name

characteristic: depth

text: adult

text: organ

text: host-associated

characteristic: environmental package

text: yes

text: Atlantic Ocean

text: Mid-Atlantic Ridge

characteristic: geographic location (region and locality)

characteristic: investigation type

characteristic: isolate

text: hydrothermal vent

text: arthropoda

text: CATGTT

characteristic: multiplex identifiers

text: crustacean metagenome

characteristic: project name

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata gills symbionts, adult from TAG, amplified by Nested PCR.

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: gills


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA

text: hydrothermal vent

text: SeBiMER

text: ifremer

text: crustacean metagenome

text: adult

text: organ

characteristic: environmental medium

text: host-associated

text: yes

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mid-Atlantic Ridge

text: hydrothermal vent

text: arthropoda

characteristic: local environmental context

text: GATGCT

text: crustacean metagenome

characteristic: organism

characteristic: pcr primers

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata hepatopancreas symbionts, adult from TAG, amplified by Direct PCR.

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: hepatopancreas

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata hepatopancreas symbionts, specimen MG1

characteristic: title


characteristic: ENA first public

text: Ifremer

text: public

characteristic: Submitter Id

text: 16S rRNA

characteristic: adapters

text: hydrothermal vent

characteristic: broad-scale environmental context

text: SeBiMER

characteristic: broker name

text: ifremer

characteristic: collecting institution

characteristic: collection date

text: crustacean metagenome

characteristic: common name

characteristic: depth

text: adult

text: organ

text: host-associated

characteristic: environmental package

text: yes

text: Atlantic Ocean

text: Mid-Atlantic Ridge

characteristic: geographic location (region and locality)

characteristic: investigation type

characteristic: isolate

text: hydrothermal vent

text: arthropoda

text: TTCGAG

characteristic: multiplex identifiers

text: crustacean metagenome

characteristic: project name

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata hepatopancreas symbionts, adult from TAG, amplified by Nested PCR.

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: hepatopancreas


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA

text: hydrothermal vent

text: SeBiMER

text: ifremer

text: crustacean metagenome

text: adult

text: organ

characteristic: environmental medium

text: host-associated

text: yes

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mid-Atlantic Ridge

text: hydrothermal vent

text: arthropoda

characteristic: local environmental context

text: GTAGAA

text: crustacean metagenome

characteristic: organism

characteristic: pcr primers

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: gonad

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata gonad symbionts, specimen MG2

characteristic: title


characteristic: ENA first public

text: Ifremer

text: public

characteristic: Submitter Id

text: 16S rRNA

characteristic: adapters

text: hydrothermal vent

characteristic: broad-scale environmental context

text: SeBiMER

characteristic: broker name

text: ifremer

characteristic: collecting institution

characteristic: collection date

text: crustacean metagenome

characteristic: common name

characteristic: depth

text: adult

text: organ

text: host-associated

characteristic: environmental package

text: yes

text: Atlantic Ocean

text: Mid-Atlantic Ridge

characteristic: geographic location (region and locality)

characteristic: investigation type

characteristic: isolate

text: hydrothermal vent

text: arthropoda

text: GAGATA

characteristic: multiplex identifiers

text: crustacean metagenome

characteristic: project name

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: gills

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata gills symbionts, specimen MG2


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA

text: hydrothermal vent

text: SeBiMER

text: ifremer

text: crustacean metagenome

text: adult

text: organ

characteristic: environmental medium

text: host-associated

text: yes

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mid-Atlantic Ridge

text: hydrothermal vent

text: arthropoda

characteristic: local environmental context

text: TGGATT

text: crustacean metagenome

characteristic: organism

characteristic: pcr primers

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: gills

characteristic: title


characteristic: ENA first public

text: Ifremer

text: public

characteristic: Submitter Id

text: 16S rRNA

characteristic: adapters

text: hydrothermal vent

characteristic: broad-scale environmental context

text: SeBiMER

characteristic: broker name

text: ifremer

characteristic: collecting institution

characteristic: collection date

text: crustacean metagenome

characteristic: common name

characteristic: depth

text: adult

text: organ

text: host-associated

characteristic: environmental package

text: yes

text: Atlantic Ocean

text: Mid-Atlantic Ridge

characteristic: geographic location (region and locality)

characteristic: investigation type

characteristic: isolate

text: hydrothermal vent

text: arthropoda

text: CTACGC

characteristic: multiplex identifiers

text: crustacean metagenome

characteristic: project name

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: hepatopancreas

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata hepatopancreas symbionts, specimen MG2


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA

text: hydrothermal vent

text: SeBiMER

text: ifremer

text: crustacean metagenome

text: adult

text: organ

characteristic: environmental medium

text: host-associated

text: yes

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mid-Atlantic Ridge

text: hydrothermal vent

text: arthropoda

characteristic: local environmental context

text: AAGCTA

text: crustacean metagenome

characteristic: organism

characteristic: pcr primers

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: hepatopancreas

characteristic: title


characteristic: ENA first public

text: Ifremer

text: public

characteristic: Submitter Id

text: 16S rRNA

characteristic: adapters

text: hydrothermal vent

characteristic: broad-scale environmental context

text: SeBiMER

characteristic: broker name

text: ifremer

characteristic: collecting institution

characteristic: collection date

text: crustacean metagenome

characteristic: common name

characteristic: depth

text: adult

text: organ

text: host-associated

characteristic: environmental package

text: yes

text: Atlantic Ocean

text: Mid-Atlantic Ridge

characteristic: geographic location (region and locality)

characteristic: investigation type

characteristic: isolate

text: hydrothermal vent

text: arthropoda

text: TGGGTA

characteristic: multiplex identifiers

text: crustacean metagenome

characteristic: project name

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: gonad

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata gonad symbionts, specimen MG3


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA

text: 5'-CTTTCCCTACACGACGCTCTTCCGATCT-3' ; 5'-GGAGTTCAGACGTGTGCTCTTCCGATCT-3'

text: hydrothermal vent

text: SeBiMER

text: ifremer

text: crustacean metagenome

text: adult

text: organ

characteristic: environmental medium

text: host-associated

text: yes

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mid-Atlantic Ridge

text: hydrothermal vent

text: arthropoda

characteristic: local environmental context

text: AACTAG

text: crustacean metagenome

characteristic: organism

characteristic: pcr primers

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: gonad

characteristic: title


characteristic: ENA first public

text: Ifremer

text: public

characteristic: Submitter Id

text: 16S rRNA

characteristic: adapters

text: hydrothermal vent

characteristic: broad-scale environmental context

text: SeBiMER

characteristic: broker name

text: ifremer

characteristic: collecting institution

characteristic: collection date

text: crustacean metagenome

characteristic: common name

characteristic: depth

text: adult

text: organ

text: host-associated

characteristic: environmental package

text: yes

text: Atlantic Ocean

text: Mid-Atlantic Ridge

characteristic: geographic location (region and locality)

characteristic: investigation type

characteristic: isolate

text: hydrothermal vent

text: arthropoda

text: ATGCTT

characteristic: multiplex identifiers

text: crustacean metagenome

characteristic: project name

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: gills

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata gills symbionts, specimen MG3


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA

text: hydrothermal vent

text: SeBiMER

text: ifremer

text: crustacean metagenome

text: adult

text: organ

characteristic: environmental medium

text: host-associated

text: yes

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mid-Atlantic Ridge

text: hydrothermal vent

text: arthropoda

characteristic: local environmental context

text: AACGCA

text: crustacean metagenome

characteristic: organism

characteristic: pcr primers

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: gills

characteristic: title


characteristic: ENA first public

text: Ifremer

text: public

characteristic: Submitter Id

text: 16S rRNA

characteristic: adapters

text: hydrothermal vent

characteristic: broad-scale environmental context

text: SeBiMER

characteristic: broker name

text: ifremer

characteristic: collecting institution

characteristic: collection date

text: crustacean metagenome

characteristic: common name

characteristic: depth

text: adult

text: organ

text: host-associated

characteristic: environmental package

text: yes

text: Atlantic Ocean

text: Mid-Atlantic Ridge

characteristic: geographic location (region and locality)

characteristic: investigation type

characteristic: isolate

text: hydrothermal vent

text: arthropoda

text: CTCTAC

characteristic: multiplex identifiers

text: crustacean metagenome

characteristic: project name

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: hepatopancreas

text: 16S partial rRNA (V3-V4) of Rimicaris exoculata hepatopancreas symbionts, specimen MG3


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA

text: hydrothermal vent

text: SeBiMER

text: ifremer

text: crustacean metagenome

text: adult

text: organ

characteristic: environmental medium

text: host-associated

text: yes

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mid-Atlantic Ridge

text: hydrothermal vent

text: arthropoda

characteristic: local environmental context

text: AGTTTG

text: crustacean metagenome

characteristic: organism

text: WHOI341 : 5'-CCTACGGGNGGCWGCAG-3 ; WHOI785 : 5-GACTACHVGGGTATCTAATCC-3

characteristic: pcr primers

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: hepatopancreas

characteristic: title


characteristic: ENA first public

text: Ifremer

text: public

characteristic: Submitter Id

text: 16S rRNA

characteristic: adapters

text: hydrothermal vent

characteristic: broad-scale environmental context

text: SeBiMER

characteristic: broker name

text: ifremer

characteristic: collecting institution

characteristic: collection date

text: crustacean metagenome

characteristic: common name

characteristic: depth

text: stage A

text: organ

text: host-associated

characteristic: environmental package

text: yes

text: Atlantic Ocean

text: Mid-Atlantic Ridge

characteristic: geographic location (region and locality)

characteristic: investigation type

characteristic: isolate

text: hydrothermal vent

text: arthropoda

text: AGAAGT

characteristic: multiplex identifiers

text: crustacean metagenome

characteristic: project name

text: 16S partial rRNA (V3-V4) of Rimicaris chacei cephalothoracic cavity symbionts, stage A from TAG, amplified by Direct PCR.

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: cephalothorax

text: 16S partial rRNA (V3-V4) of Rimicaris chacei cephalothoracic cavity symbionts, specimen bebe12A


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA

text: hydrothermal vent

text: SeBiMER

text: ifremer

text: crustacean metagenome

text: stage A

text: organ

characteristic: environmental medium

text: host-associated

text: yes

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mid-Atlantic Ridge

text: hydrothermal vent

text: arthropoda

characteristic: local environmental context

text: TGCACG

text: crustacean metagenome

characteristic: organism

characteristic: pcr primers

text: 16S partial rRNA (V3-V4) of Rimicaris chacei gills symbionts, stage A from TAG, amplified by Nested PCR.

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: gills

text: 16S partial rRNA (V3-V4) of Rimicaris chacei gills symbionts, specimen bebe12A

characteristic: title


characteristic: ENA first public

text: Ifremer

text: public

characteristic: Submitter Id

text: 16S rRNA

characteristic: adapters

text: hydrothermal vent

characteristic: broad-scale environmental context

text: SeBiMER

characteristic: broker name

text: ifremer

characteristic: collecting institution

characteristic: collection date

text: crustacean metagenome

characteristic: common name

characteristic: depth

text: stage A

text: organ

text: host-associated

characteristic: environmental package

text: yes

text: Atlantic Ocean

text: Mid-Atlantic Ridge

characteristic: geographic location (region and locality)

characteristic: investigation type

characteristic: isolate

text: hydrothermal vent

text: arthropoda

text: ATCGTT

characteristic: multiplex identifiers

text: crustacean metagenome

characteristic: project name

text: 16S partial rRNA (V3-V4) of Rimicaris chacei foregut symbionts, stage A from TAG, amplified by Nested PCR.

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: foregut

text: 16S partial rRNA (V3-V4) of Rimicaris chacei foregut symbionts, specimen bebe12A


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA

text: hydrothermal vent

text: SeBiMER

text: ifremer

text: crustacean metagenome

text: stage A

text: organ

characteristic: environmental medium

text: host-associated

text: yes

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mid-Atlantic Ridge

text: hydrothermal vent

text: arthropoda

characteristic: local environmental context

text: AGTCGG

text: crustacean metagenome

characteristic: organism

characteristic: pcr primers

text: 16S partial rRNA (V3-V4) of Rimicaris chacei midgut tube symbionts, stage A from TAG, amplified by Direct PCR.

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: midgut tube

text: 16S partial rRNA (V3-V4) of Rimicaris chacei midgut tube symbionts, specimen bebe12A

characteristic: title


characteristic: ENA first public

text: Ifremer

text: public

characteristic: Submitter Id

text: 16S rRNA

characteristic: adapters

text: hydrothermal vent

characteristic: broad-scale environmental context

text: SeBiMER

characteristic: broker name

text: ifremer

characteristic: collecting institution

characteristic: collection date

text: crustacean metagenome

characteristic: common name

characteristic: depth

text: stage A

text: organ

text: host-associated

characteristic: environmental package

text: yes

text: Atlantic Ocean

text: Mid-Atlantic Ridge

characteristic: geographic location (region and locality)

characteristic: investigation type

characteristic: isolate

text: hydrothermal vent

text: arthropoda

text: GCGCCC

characteristic: multiplex identifiers

text: crustacean metagenome

characteristic: project name

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: cephalothorax

text: 16S partial rRNA (V3-V4) of Rimicaris chacei cephalothoracic cavity symbionts, specimen R08


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA

text: hydrothermal vent

text: SeBiMER

text: ifremer

text: crustacean metagenome

text: stage A

text: organ

characteristic: environmental medium

text: host-associated

text: yes

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mid-Atlantic Ridge

text: hydrothermal vent

text: arthropoda

characteristic: local environmental context

text: CTTAAA

text: crustacean metagenome

characteristic: organism

characteristic: pcr primers

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: gills

text: 16S partial rRNA (V3-V4) of Rimicaris chacei gills symbionts, specimen R08

characteristic: title


characteristic: ENA first public

text: Ifremer

text: public

characteristic: Submitter Id

text: 16S rRNA

characteristic: adapters

text: hydrothermal vent

characteristic: broad-scale environmental context

text: SeBiMER

characteristic: broker name

text: ifremer

characteristic: collecting institution

characteristic: collection date

text: crustacean metagenome

characteristic: common name

characteristic: depth

text: stage A

text: organ

text: host-associated

characteristic: environmental package

text: yes

text: Atlantic Ocean

text: Mid-Atlantic Ridge

characteristic: geographic location (region and locality)

characteristic: investigation type

characteristic: isolate

text: hydrothermal vent

text: arthropoda

text: GGCCTC

characteristic: multiplex identifiers

text: crustacean metagenome

characteristic: project name

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: foregut

text: 16S partial rRNA (V3-V4) of Rimicaris chacei foregut symbionts, specimen R08


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA

text: hydrothermal vent

text: SeBiMER

text: ifremer

text: crustacean metagenome

text: stage A

text: organ

characteristic: environmental medium

text: host-associated

text: yes

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mid-Atlantic Ridge

text: hydrothermal vent

text: arthropoda

characteristic: local environmental context

text: GAGGGC

text: crustacean metagenome

characteristic: organism

characteristic: pcr primers

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: midgut tube

text: 16S partial rRNA (V3-V4) of Rimicaris chacei midgut tube symbionts, specimen R08

characteristic: title


characteristic: ENA first public

text: Ifremer

text: public

characteristic: Submitter Id

text: 16S rRNA

characteristic: adapters

text: hydrothermal vent

characteristic: broad-scale environmental context

text: SeBiMER

characteristic: broker name

text: ifremer

characteristic: collecting institution

characteristic: collection date

text: crustacean metagenome

characteristic: common name

characteristic: depth

text: stage A

text: organ

text: host-associated

characteristic: environmental package

text: yes

text: Atlantic Ocean

text: Mid-Atlantic Ridge

characteristic: geographic location (region and locality)

characteristic: investigation type

characteristic: isolate

text: hydrothermal vent

text: arthropoda

text: AAGGCC

characteristic: multiplex identifiers

text: crustacean metagenome

characteristic: project name

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

characteristic: sequencing method

text: 16S rRNA

text: cephalothorax

text: 16S partial rRNA (V3-V4) of Rimicaris chacei cephalothoracic cavity symbionts, specimen R32


characteristic: ENA-CHECKLIST

characteristic: External Id

text: Ifremer

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 16S rRNA

text: 5'-CTTTCCCTACACGACGCTCTTCCGATCT-3' ; 5'-GGAGTTCAGACGTGTGCTCTTCCGATCT-3'

text: hydrothermal vent

text: SeBiMER

text: ifremer

text: crustacean metagenome

text: stage A

text: organ

characteristic: environmental medium

text: host-associated

text: yes

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Mid-Atlantic Ridge

text: hydrothermal vent

text: arthropoda

characteristic: local environmental context

text: TAAGGG

text: crustacean metagenome

characteristic: organism

characteristic: pcr primers

text: crustacean metagenome

text: Sequencing by synthesis (Illumina)

text: 16S rRNA

characteristic: target gene

characteristic: target subfragment

text: gills

text: 16S partial rRNA (V3-V4) of Rimicaris chacei gills symbionts, specimen R32

characteristic: title