text: public

characteristic: Submitter Id

characteristic: collection date

text: GTDB_g__Pseudomonas_E;s__Pseudomonas_E fluorescens_N;GCF_001020875.1

characteristic: description

text: Netherlands

text: Schiermonnikoog

text: Endosphere

text: Pseudomonas fluorescens

text: Pseudomonas fluorescens

text: Illumina MiSeq

text: Limonium vulgare


status: PUBLIC

characteristic: ENA first public

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Groningen Institute for Evolutionary Life Sciences, University of Groningen

unit: y-m

text: GTDB_g__Pseudomonas_E;s__Pseudomonas_E taetrolens;GCF_900475285.1

text: Netherlands

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Schiermonnikoog

characteristic: geographic location (region and locality)

text: Endosphere

characteristic: habitat

text: Pseudomonas taetrolens

characteristic: organism

text: Draft genomes of Pseudomonas from a salt marsh soil chronosequence

characteristic: project name

text: Pseudomonas taetrolens

text: Illumina MiSeq

characteristic: sequencing method

unit: year

text: Limonium vulgare

characteristic: title


text: Groningen Institute for Evolutionary Life Sciences, University of Groningen

text: public

characteristic: Submitter Id

characteristic: collection date

text: GTDB_g__Pseudomonas_E;s__Pseudomonas_E sp014207255;GCF_014207255.1

characteristic: description

text: Netherlands

text: Schiermonnikoog

text: Endosphere

text: Pseudomonas sp. JAI120

text: Pseudomonas sp. JAI120

text: Illumina MiSeq

text: Limonium vulgare


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: public

text: GTDB_g__Pseudomonas_E;s__Pseudomonas_E sivasensis;GCF_013778505.1

text: Netherlands

text: Schiermonnikoog

text: Endosphere

text: Pseudomonas sivasensis

text: Pseudomonas sivasensis

text: Illumina MiSeq

text: Limonium vulgare


characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: GTDB_g__Pseudomonas_E;s__Pseudomonas_E helleri_A;GCF_009600315.1

text: Netherlands

text: Schiermonnikoog

text: Endosphere

text: Pseudomonas helleri

text: Pseudomonas helleri

text: Illumina MiSeq

text: Limonium vulgare


text: public

characteristic: SRA accession

text: GTDB_g__Pseudomonas_E;s__Pseudomonas_E silesiensis;GCF_001661075.1

text: Netherlands

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Schiermonnikoog

text: Rhizosphere

text: Pseudomonas silesiensis

text: Pseudomonas silesiensis

text: Illumina MiSeq

text: Artemisia maritima


text: public

text: GTDB_g__Pseudomonas_E;s__Pseudomonas_E canadensis;GCF_000503215.1

text: Netherlands

characteristic: geographic location (longitude)

text: Schiermonnikoog

characteristic: geographic location (region and locality)

text: Rhizosphere

characteristic: habitat

text: Pseudomonas canadensis

text: Pseudomonas canadensis

text: Illumina MiSeq

text: Artemisia maritima


text: public

text: GTDB_g__Pseudomonas_E;s__Pseudomonas_E hunanensis;GCF_003671955.1

text: Netherlands

text: Schiermonnikoog

text: Rhizosphere

text: Pseudomonas hunanensis

characteristic: organism

characteristic: project name

text: Pseudomonas hunanensis

text: Illumina MiSeq

characteristic: sequencing method

text: Artemisia maritima


text: public

characteristic: Submitter Id

characteristic: collection date

text: GTDB_g__Pseudomonas_E;s__Pseudomonas_E proteolytica;GCF_007858275.1

text: Netherlands

text: Schiermonnikoog

text: Rhizosphere

text: Pseudomonas proteolytica

text: Pseudomonas proteolytica

text: Illumina MiSeq

text: Artemisia maritima

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: GTDB_g__Pseudomonas_E;s__Pseudomonas_E migulae_A;GCF_014076455.1

characteristic: description

text: Netherlands

text: Schiermonnikoog

text: Rhizosphere

text: Pseudomonas migulae

text: Pseudomonas migulae

text: Illumina MiSeq

text: Artemisia maritima


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: GTDB_g__Pseudomonas_E;s__Pseudomonas_E sp002843585;GCF_002843585.1

text: Netherlands

text: Schiermonnikoog

text: Rhizosphere

text: Pseudomonas rhizophila

text: Pseudomonas rhizophila

text: Illumina MiSeq

text: Artemisia maritima


text: public

characteristic: INSDC status

characteristic: SRA accession

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Schiermonnikoog

text: Rhizosphere

text: Pseudomonas proteolytica

text: Pseudomonas proteolytica

text: Illumina MiSeq

text: Limonium vulgare


text: public

text: GTDB_g__Pseudomonas_E;s__Pseudomonas_E syringae_E;GCF_001238485.1

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Schiermonnikoog

characteristic: geographic location (region and locality)

text: Rhizosphere

text: Pseudomonas proteolytica

text: Pseudomonas proteolytica

text: Illumina MiSeq

text: Limonium vulgare


text: public

text: Netherlands

text: Schiermonnikoog

text: Rhizosphere

characteristic: habitat

text: Pseudomonas sivasensis

characteristic: organism

characteristic: project name

text: Pseudomonas sivasensis

text: Illumina MiSeq

text: Limonium vulgare


text: public

characteristic: Submitter Id

characteristic: collection date

text: Netherlands

text: Schiermonnikoog

text: Rhizosphere

text: Pseudomonas rhizophila

text: Pseudomonas rhizophila

text: Illumina MiSeq

characteristic: sequencing method

text: Limonium vulgare


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: GTDB_g__Pseudomonas_E;s__Pseudomonas_E capeferrum;GCF_000731675.1

text: Netherlands

text: Schiermonnikoog

text: Rhizosphere

text: Pseudomonas capeferrum

text: Pseudomonas capeferrum

text: Illumina MiSeq

text: Limonium vulgare

characteristic: title


characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: description

text: Netherlands

text: Schiermonnikoog

text: Rhizosphere

text: Pseudomonas hunanensis

text: Pseudomonas hunanensis

text: Illumina MiSeq

text: Limonium vulgare


text: LSHTM

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Sample 1 ONT

text: Thailand

text: diseased

characteristic: host health state

text: Homo Sapiens

characteristic: host scientific name

text: not provided

characteristic: isolate

text: human sputum

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: S1 ONT


text: LSHTM

text: public

text: Thailand

characteristic: geographic location (country and/or sea)

text: diseased

text: Homo Sapiens

text: not provided

text: human sputum

text: Mycobacterium tuberculosis

characteristic: organism

text: Mycobacterium tuberculosis


text: public

tag: Namespace:TRON - TRANSLATIONAL ONCOLOGY AT THE JOHANNES GUTENBERG-UNIVERSITY MAINZ

characteristic: Submitter Id

text: human

characteristic: common name

text: mock-transfected HeLa cells (purchased from DMSZ, Germany) harvested 6h post transfection (biological replicate 1)

text: Germany

text: Homo sapiens

text: Homo sapiens


text: TRON - TRANSLATIONAL ONCOLOGY AT THE JOHANNES GUTENBERG-UNIVERSITY MAINZ

text: public

characteristic: collection date

text: human

text: mock-transfected HeLa cells (purchased from DMSZ, Germany) harvested 6h post transfection (biological replicate 2)

text: Germany

text: Homo sapiens

text: Homo sapiens


characteristic: ENA first public

text: public

text: human

text: mock-transfected HeLa cells (purchased from DMSZ, Germany) harvested 6h post transfection (biological replicate 3)

text: Germany

text: Homo sapiens

text: Homo sapiens


characteristic: ENA-CHECKLIST

text: public

text: human

text: mock-transfected HeLa cells (purchased from DMSZ, Germany) harvested 24h post transfection (biological replicate 1)

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: mock-transfected HeLa cells (purchased from DMSZ, Germany) harvested 24h post transfection (biological replicate 2)

text: Germany

text: Homo sapiens

text: Homo sapiens

characteristic: title


characteristic: External Id

text: public

text: human

text: mock-transfected HeLa cells (purchased from DMSZ, Germany) harvested 24h post transfection (biological replicate 3)

text: Germany

text: Homo sapiens

text: Homo sapiens


characteristic: INSDC center name

text: public

text: human

text: HeLa cells (purchased from DMSZ, Germany) transfected with synthetic nucleoside-modified mRNA encoding human MYPOP (NM_001012643) harvested 6h post transfection (biological replicate 1)

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: HeLa cells (purchased from DMSZ, Germany) transfected with synthetic nucleoside-modified mRNA encoding human MYPOP (NM_001012643) harvested 6h post transfection (biological replicate 2)

characteristic: description

text: Germany

text: Homo sapiens

text: Homo sapiens


characteristic: INSDC last update

text: public

text: human

text: HeLa cells (purchased from DMSZ, Germany) transfected with synthetic nucleoside-modified mRNA encoding human MYPOP (NM_001012643) harvested 6h post transfection (biological replicate 3)

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

characteristic: INSDC status

text: human

text: HeLa cells (purchased from DMSZ, Germany) transfected with synthetic nucleoside-modified mRNA encoding human MYPOP (NM_001012643) harvested 24h post transfection (biological replicate 1)

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

characteristic: SRA accession

text: human

text: HeLa cells (purchased from DMSZ, Germany) transfected with synthetic nucleoside-modified mRNA encoding human MYPOP (NM_001012643) harvested 24h post transfection (biological replicate 2)

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: HeLa cells (purchased from DMSZ, Germany) transfected with synthetic nucleoside-modified mRNA encoding human MYPOP (NM_001012643) harvested 24h post transfection (biological replicate 3)

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: mock-transfected NHEK cells (purchased from PromoCell, Germany) harvested 6h post transfection (biological replicate 1)

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: mock-transfected NHEK cells (purchased from PromoCell, Germany) harvested 6h post transfection (biological replicate 2)

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: mock-transfected NHEK cells (purchased from PromoCell, Germany) harvested 6h post transfection (biological replicate 3)

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: mock-transfected NHEK cells (purchased from PromoCell, Germany) harvested 24h post transfection (biological replicate 1)

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: mock-transfected NHEK cells (purchased from PromoCell, Germany) harvested 24h post transfection (biological replicate 2)

text: Germany

text: Homo sapiens

text: Homo sapiens


text: TRON - TRANSLATIONAL ONCOLOGY AT THE JOHANNES GUTENBERG-UNIVERSITY MAINZ

text: public

text: human

text: mock-transfected NHEK cells (purchased from PromoCell, Germany) harvested 24h post transfection (biological replicate 3)

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: NHEK cells (purchased from PromoCell, Germany) transfected with synthetic nucleoside-modified mRNA encoding human MYPOP (NM_001012643) harvested 6h post transfection (biological replicate 1)

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: NHEK cells (purchased from PromoCell, Germany) transfected with synthetic nucleoside-modified mRNA encoding human MYPOP (NM_001012643) harvested 6h post transfection (biological replicate 2)

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: NHEK cells (purchased from PromoCell, Germany) transfected with synthetic nucleoside-modified mRNA encoding human MYPOP (NM_001012643) harvested 6h post transfection (biological replicate 3)

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: NHEK cells (purchased from PromoCell, Germany) transfected with synthetic nucleoside-modified mRNA encoding human MYPOP (NM_001012643) harvested 24h post transfection (biological replicate 1)

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: NHEK cells (purchased from PromoCell, Germany) transfected with synthetic nucleoside-modified mRNA encoding human MYPOP (NM_001012643) harvested 24h post transfection (biological replicate 2)

text: Germany

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: NHEK cells (purchased from PromoCell, Germany) transfected with synthetic nucleoside-modified mRNA encoding human MYPOP (NM_001012643) harvested 24h post transfection (biological replicate 3)

text: Germany

text: Homo sapiens

text: Homo sapiens


text: Groningen Institute for Evolutionary Life Sciences, University of Groningen

text: public

text: d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E;s__

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Schiermonnikoog

characteristic: geographic location (region and locality)

text: Endosphere

characteristic: habitat

text: Pseudomonas sp. EA_105y_Pfl2_R69

text: Draft genomes of Pseudomonas from a salt marsh soil chronosequence

characteristic: project name

text: Pseudomonas sp. EA_105y_Pfl2_R69

text: Illumina MiSeq

characteristic: sequencing method

text: Artemisia maritima


text: public

characteristic: Submitter Id

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Schiermonnikoog

text: Endosphere

text: Pseudomonas sp. EA_15y_Pfl1_P101

characteristic: organism

text: Pseudomonas sp. EA_15y_Pfl1_P101

text: Illumina MiSeq

text: Artemisia maritima


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

characteristic: collection date

text: Netherlands

text: Schiermonnikoog

text: Endosphere

text: Pseudomonas sp. EA_15y_Pfl1_P102

text: Pseudomonas sp. EA_15y_Pfl1_P102

text: Illumina MiSeq

text: Artemisia maritima


characteristic: External Id

characteristic: INSDC center name

text: public

text: Netherlands

text: Schiermonnikoog

text: Endosphere

text: Pseudomonas sp. EA_15y_Pfl1_P104

text: Pseudomonas sp. EA_15y_Pfl1_P104

text: Illumina MiSeq

text: Artemisia maritima

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: description

text: Netherlands

text: Schiermonnikoog

text: Endosphere

text: Pseudomonas sp. EA_15y_Pfl2_R67

text: Pseudomonas sp. EA_15y_Pfl2_R67

text: Illumina MiSeq

text: Artemisia maritima


text: public

characteristic: SRA accession

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Schiermonnikoog

text: Endosphere

text: Pseudomonas sp. EA_35y_Pfl1_P108

text: Pseudomonas sp. EA_35y_Pfl1_P108

text: Illumina MiSeq

text: Artemisia maritima


text: public

text: Netherlands

text: Schiermonnikoog

characteristic: geographic location (region and locality)

text: Endosphere

characteristic: habitat

text: Pseudomonas sp. EA_35y_Pfl2_R111

characteristic: project name

text: Pseudomonas sp. EA_35y_Pfl2_R111

text: Illumina MiSeq

text: Artemisia maritima


text: public

characteristic: Submitter Id

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Schiermonnikoog

text: Endosphere

text: Pseudomonas sp. EA_35y_Pfl2_R5

text: Pseudomonas sp. EA_35y_Pfl2_R5

text: Illumina MiSeq

characteristic: sequencing method

text: Artemisia maritima


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: Netherlands

text: Schiermonnikoog

text: Endosphere

text: Pseudomonas sp. EA_5y_Pfl2_R50

characteristic: organism

text: Pseudomonas sp. EA_5y_Pfl2_R50

text: Illumina MiSeq

text: Artemisia maritima


characteristic: External Id

characteristic: INSDC center name

text: public

characteristic: collection date

text: Netherlands

text: Schiermonnikoog

text: Endosphere

text: Pseudomonas sp. EA_65y_Pfl1_P113

text: Pseudomonas sp. EA_65y_Pfl1_P113

text: Illumina MiSeq

text: Artemisia maritima


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Netherlands

text: Schiermonnikoog

text: Endosphere

text: Pseudomonas sp. EA_65y_Pfl1_P120

text: Pseudomonas sp. EA_65y_Pfl1_P120

text: Illumina MiSeq

text: Artemisia maritima

characteristic: title


text: public

characteristic: SRA accession

characteristic: description

text: Netherlands

characteristic: geographic location (latitude)

text: Schiermonnikoog

text: Endosphere

text: Pseudomonas sp. EA_65y_Pfl2_P74

text: Pseudomonas sp. EA_65y_Pfl2_P74

text: Illumina MiSeq

text: Artemisia maritima


text: public

text: Netherlands

characteristic: geographic location (longitude)

text: Schiermonnikoog

characteristic: geographic location (region and locality)

text: Endosphere

characteristic: habitat

text: Pseudomonas sp. EA_65y_Pfl2_P78

text: Pseudomonas sp. EA_65y_Pfl2_P78

text: Illumina MiSeq

text: Artemisia maritima


text: public

characteristic: Submitter Id

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Schiermonnikoog

text: Endosphere

text: Pseudomonas sp. EL_65y_Pfl1_R32

characteristic: project name

text: Pseudomonas sp. EL_65y_Pfl1_R32

text: Illumina MiSeq

text: Limonium vulgare


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: Netherlands

text: Schiermonnikoog

text: Endosphere

text: Pseudomonas sp. EL_65y_Pfl1_R83

text: Pseudomonas sp. EL_65y_Pfl1_R83

text: Illumina MiSeq

characteristic: sequencing method

text: Limonium vulgare


characteristic: External Id

characteristic: INSDC center name

text: public

text: Netherlands

text: Schiermonnikoog

text: Endosphere

text: Pseudomonas sp. EL_65y_Pfl2_R95

characteristic: organism

text: Pseudomonas sp. EL_65y_Pfl2_R95

text: Illumina MiSeq

text: Limonium vulgare


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: collection date

text: Netherlands

text: Schiermonnikoog

text: Endosphere

text: Pseudomonas sp. EL_65y_Pfl2_R96

text: Pseudomonas sp. EL_65y_Pfl2_R96

text: Illumina MiSeq

text: Limonium vulgare


text: public

characteristic: SRA accession

characteristic: description

text: Netherlands

text: Schiermonnikoog

text: Rhizosphere

text: Pseudomonas sp. RA_105y_Pfl1_P41

text: Pseudomonas sp. RA_105y_Pfl1_P41

text: Illumina MiSeq

text: Artemisia maritima

characteristic: title


text: public

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Schiermonnikoog

characteristic: geographic location (region and locality)

text: Rhizosphere

text: Pseudomonas sp. RA_105y_Pfl2_P56

text: Pseudomonas sp. RA_105y_Pfl2_P56

text: Illumina MiSeq

text: Artemisia maritima


text: public

characteristic: Submitter Id

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Schiermonnikoog

text: Rhizosphere

characteristic: habitat

text: Pseudomonas sp. RA_15y_Pfl1_P11

text: Pseudomonas sp. RA_15y_Pfl1_P11

text: Illumina MiSeq

text: Artemisia maritima


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: Netherlands

text: Schiermonnikoog

text: Rhizosphere

text: Pseudomonas sp. RA_15y_Pfl1_P12

characteristic: project name

text: Pseudomonas sp. RA_15y_Pfl1_P12

text: Illumina MiSeq

text: Artemisia maritima


characteristic: External Id

characteristic: INSDC center name

text: public

text: Netherlands

text: Schiermonnikoog

text: Rhizosphere

text: Pseudomonas sp. RA_15y_Pfl2_54

text: Pseudomonas sp. RA_15y_Pfl2_54

text: Illumina MiSeq

characteristic: sequencing method

text: Artemisia maritima


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Netherlands

text: Schiermonnikoog

text: Rhizosphere

text: Pseudomonas sp. RA_35y_Pfl2_P32

characteristic: organism

text: Pseudomonas sp. RA_35y_Pfl2_P32

text: Illumina MiSeq

text: Artemisia maritima


text: public

characteristic: SRA accession

characteristic: collection date

characteristic: description

text: Netherlands

text: Schiermonnikoog

text: Rhizosphere

text: Pseudomonas sp. RA_5y_Pfl1_P24

text: Pseudomonas sp. RA_5y_Pfl1_P24

text: Illumina MiSeq

text: Artemisia maritima


text: public

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Schiermonnikoog

text: Rhizosphere

text: Pseudomonas sp. RL_105y_Pfl1_103

text: Pseudomonas sp. RL_105y_Pfl1_103

text: Illumina MiSeq

text: Limonium vulgare

characteristic: title


text: public

characteristic: Submitter Id

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Schiermonnikoog

characteristic: geographic location (region and locality)

text: Rhizosphere

text: Pseudomonas sp. RL_105y_Pfl2_101

text: Pseudomonas sp. RL_105y_Pfl2_101

text: Illumina MiSeq

text: Limonium vulgare


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: Netherlands

text: Schiermonnikoog

text: Rhizosphere

characteristic: habitat

text: Pseudomonas sp. RL_15y_Pfl2_60

text: Pseudomonas sp. RL_15y_Pfl2_60

text: Illumina MiSeq

text: Limonium vulgare


characteristic: External Id

characteristic: INSDC center name

text: public

text: Netherlands

text: Schiermonnikoog

text: Rhizosphere

text: Pseudomonas sp. RL_35y_Pfl2_P42

characteristic: project name

text: Pseudomonas sp. RL_35y_Pfl2_P42

text: Illumina MiSeq

text: Limonium vulgare


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Netherlands

text: Schiermonnikoog

text: Rhizosphere

text: Pseudomonas sp. RL_5y_Pfl2_69

text: Pseudomonas sp. RL_5y_Pfl2_69

text: Illumina MiSeq

characteristic: sequencing method

text: Limonium vulgare


text: public

characteristic: SRA accession

characteristic: collection date

text: Netherlands

text: Schiermonnikoog

text: Rhizosphere

text: Pseudomonas sp. RL_5y_Pfl2_70

characteristic: organism

text: Pseudomonas sp. RL_5y_Pfl2_70

text: Illumina MiSeq

text: Limonium vulgare


text: public

characteristic: description

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Schiermonnikoog

text: Rhizosphere

text: Pseudomonas sp. RL_5y_Pfl2_73

text: Pseudomonas sp. RL_5y_Pfl2_73

text: Illumina MiSeq

text: Limonium vulgare


text: CMM

text: public

characteristic: Submitter Id

text: RPE1-hTERT-DAAO^TOM20 p53KO

text: human

characteristic: common name

text: RPE1-hTERT-DAAO^TOM20 p53KO treated with L-Ala clone 2

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: Homo sapiens

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1790644 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Brazil

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured Alphaproteobacteria bacterium

text: This project focuses on the Amazon River-to-tropical Atlantic Ocean continuum because of both its immense scale and its apparent sensitivity to climate variability and anthropogenic forcing. The river’s effect on the ocean depends not only on the river hydrology, but what the river carries and how those components are modified during transit from their terrestrial or aquatic origins. We brought together limnologists and oceanographers in an integrated project to improve our understanding of carbon exchange between the atmosphere and this tropical river continuum, focusing on the lower reach, nearshore, and offshore tropical Atlantic, with the goal of improving predictive capabilities under differing climate change scenarios.

characteristic: sample derived from

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1790644_concoct_28


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1204580 of study SRP039390.

characteristic: description

text: amazon

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured Phycisphaera sp.

characteristic: organism

characteristic: project name

text: uncultured Phycisphaera sp.

text: Illumina Genome Analyzer IIx

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR1204580_concoct_5

characteristic: title


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1792674 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Brazil

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured bacterium

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1792674_binner123_Refined_3


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1786281 of study SRP039390.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1786281_concoct_30


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1793862 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Brazil

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured Moraxellaceae bacterium

text: uncultured Moraxellaceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR1793862_binner13_Refined_3

characteristic: title


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1204581 of study SRP039390.

characteristic: description

text: amazon

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured Acholeplasmataceae bacterium

characteristic: organism

characteristic: project name

text: uncultured Acholeplasmataceae bacterium

text: Illumina Genome Analyzer IIx

text: multi-marker approach

text: Metagenome-assembled genome: SRR1204581_metabat2_20


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1790646 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Brazil

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: Methanococcus maripaludis

characteristic: sample derived from

text: Methanococcus maripaludis

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1790646_concoct_42


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

text: MGnify-genomes-generation-pipeline_v1.0.0

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1796236 of study SRP039390.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured Planctomycetaceae bacterium

text: uncultured Planctomycetaceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR1796236_metabat2_27

characteristic: title


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1788318 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Brazil

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured bacterium

characteristic: organism

text: This project focuses on the Amazon River-to-tropical Atlantic Ocean continuum because of both its immense scale and its apparent sensitivity to climate variability and anthropogenic forcing. The river’s effect on the ocean depends not only on the river hydrology, but what the river carries and how those components are modified during transit from their terrestrial or aquatic origins. We brought together limnologists and oceanographers in an integrated project to improve our understanding of carbon exchange between the atmosphere and this tropical river continuum, focusing on the lower reach, nearshore, and offshore tropical Atlantic, with the goal of improving predictive capabilities under differing climate change scenarios.

characteristic: project name

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1788318_binner12_Refined_5


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1790679 of study SRP039390.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured Burkholderiales bacterium

characteristic: sample derived from

text: uncultured Burkholderiales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1790679_binner13_Refined_11


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1205250 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Atlantic Ocean

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured Erythrobacter sp.

text: uncultured Erythrobacter sp.

text: Illumina Genome Analyzer IIx

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR1205250_binner23_Refined_12

characteristic: title


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR4831650 of study SRP039390.

characteristic: description

text: amazon

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured Candidatus Poseidoniales archaeon

characteristic: organism

characteristic: project name

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR4831650_concoct_15


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1182512 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Atlantic Ocean

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured Opitutae bacterium

characteristic: sample derived from

text: uncultured Opitutae bacterium

text: Illumina Genome Analyzer IIx

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1182512_binner123_Refined_17


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1793862 of study SRP039390.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured bacterium

text: uncultured bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR1793862_binner23_Refined_12

characteristic: title


characteristic: ENA-CHECKLIST

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1185413 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Atlantic Ocean

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured Synechococcus sp.

characteristic: organism

characteristic: project name

text: uncultured Synechococcus sp.

text: Illumina Genome Analyzer IIx

text: multi-marker approach

text: Metagenome-assembled genome: SRR1185413_binner13_Refined_14


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1209978 of study SRP039390.

characteristic: description

text: amazon

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured bacterium

text: This project focuses on the Amazon River-to-tropical Atlantic Ocean continuum because of both its immense scale and its apparent sensitivity to climate variability and anthropogenic forcing. The river’s effect on the ocean depends not only on the river hydrology, but what the river carries and how those components are modified during transit from their terrestrial or aquatic origins. We brought together limnologists and oceanographers in an integrated project to improve our understanding of carbon exchange between the atmosphere and this tropical river continuum, focusing on the lower reach, nearshore, and offshore tropical Atlantic, with the goal of improving predictive capabilities under differing climate change scenarios.

characteristic: sample derived from

text: uncultured bacterium

text: Illumina Genome Analyzer IIx

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1209978_maxbin2_2


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured bacterium

text: uncultured bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR1793862_concoct_29

characteristic: title


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1786279 of study SRP039390.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured Derxia sp.

characteristic: organism

characteristic: project name

text: uncultured Derxia sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1786279_binner23_Refined_34


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR4831644 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Atlantic Ocean

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

characteristic: sample derived from

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR4831644_concoct_69


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1787940 of study SRP039390.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Moraxella osloensis

text: Moraxella osloensis

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR1787940_binner13_Refined_30

characteristic: title


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1790489 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Brazil

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured Burkholderiales bacterium

characteristic: organism

characteristic: project name

text: uncultured Burkholderiales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1790489_binner13_Refined_3


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1793861 of study SRP039390.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1793861_metabat2_35


characteristic: ENA-CHECKLIST

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1790678 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Brazil

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured Ignavibacteria bacterium

text: uncultured Ignavibacteria bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR1790678_binner13_Refined_15

characteristic: title


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1796118 of study SRP039390.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured Verrucomicrobiales bacterium

characteristic: organism

text: This project focuses on the Amazon River-to-tropical Atlantic Ocean continuum because of both its immense scale and its apparent sensitivity to climate variability and anthropogenic forcing. The river’s effect on the ocean depends not only on the river hydrology, but what the river carries and how those components are modified during transit from their terrestrial or aquatic origins. We brought together limnologists and oceanographers in an integrated project to improve our understanding of carbon exchange between the atmosphere and this tropical river continuum, focusing on the lower reach, nearshore, and offshore tropical Atlantic, with the goal of improving predictive capabilities under differing climate change scenarios.

characteristic: project name

text: uncultured Verrucomicrobiales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1796118_concoct_44


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1790644 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Brazil

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1790644_concoct_37


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR4831650 of study SRP039390.

characteristic: description

text: amazon

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured Gammaproteobacteria bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR4831650_binner123_Refined_4

characteristic: title


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1204581 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Atlantic Ocean

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured bacterium

characteristic: organism

characteristic: project name

text: uncultured bacterium

text: Illumina Genome Analyzer IIx

text: multi-marker approach

text: Metagenome-assembled genome: SRR1204581_concoct_70


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1790646 of study SRP039390.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1790646_binner13_Refined_13


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1182512 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Atlantic Ocean

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured Opitutae bacterium

text: uncultured Opitutae bacterium

text: Illumina Genome Analyzer IIx

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR1182512_concoct_47

characteristic: title


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

text: MGnify-genomes-generation-pipeline_v1.0.0

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1209977 of study SRP039390.

characteristic: description

text: amazon

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured Flavobacteriales bacterium

characteristic: organism

characteristic: project name

text: uncultured Flavobacteriales bacterium

text: Illumina Genome Analyzer IIx

text: multi-marker approach

text: Metagenome-assembled genome: SRR1209977_binner12_Refined_6


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1786279 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Brazil

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured bacterium

text: This project focuses on the Amazon River-to-tropical Atlantic Ocean continuum because of both its immense scale and its apparent sensitivity to climate variability and anthropogenic forcing. The river’s effect on the ocean depends not only on the river hydrology, but what the river carries and how those components are modified during transit from their terrestrial or aquatic origins. We brought together limnologists and oceanographers in an integrated project to improve our understanding of carbon exchange between the atmosphere and this tropical river continuum, focusing on the lower reach, nearshore, and offshore tropical Atlantic, with the goal of improving predictive capabilities under differing climate change scenarios.

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1786279_binner13_Refined_14


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1796236 of study SRP039390.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured Burkholderiales bacterium

text: uncultured Burkholderiales bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR1796236_concoct_17

characteristic: title


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1790644 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Brazil

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured Planctomycetaceae bacterium

characteristic: organism

characteristic: project name

text: uncultured Planctomycetaceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1790644_maxbin2_2


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR4831644 of study SRP039390.

characteristic: description

text: amazon

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured Ilumatobacteraceae bacterium

characteristic: sample derived from

text: uncultured Ilumatobacteraceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR4831644_concoct_28


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1199270 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Atlantic Ocean

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured Flavobacteriaceae bacterium

text: uncultured Flavobacteriaceae bacterium

text: Illumina MiSeq

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR1199270_metabat2_2

characteristic: title


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR4831646 of study SRP039390.

characteristic: description

text: amazon

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured Opitutales bacterium

characteristic: organism

characteristic: project name

text: uncultured Opitutales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR4831646_metabat2_20


characteristic: ENA-CHECKLIST

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1787940 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Brazil

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: Undibacterium luofuense

characteristic: sample derived from

text: Undibacterium luofuense

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1787940_metabat2_8


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: MGnify-genomes-generation-pipeline_v1.0.0

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR4831650 of study SRP039390.

characteristic: description

text: amazon

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured Flavobacteriales bacterium

text: uncultured Flavobacteriales bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR4831650_binner12_Refined_32

characteristic: title


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Atlantic Ocean

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured Flavobacteriaceae bacterium

characteristic: organism

text: This project focuses on the Amazon River-to-tropical Atlantic Ocean continuum because of both its immense scale and its apparent sensitivity to climate variability and anthropogenic forcing. The river’s effect on the ocean depends not only on the river hydrology, but what the river carries and how those components are modified during transit from their terrestrial or aquatic origins. We brought together limnologists and oceanographers in an integrated project to improve our understanding of carbon exchange between the atmosphere and this tropical river continuum, focusing on the lower reach, nearshore, and offshore tropical Atlantic, with the goal of improving predictive capabilities under differing climate change scenarios.

characteristic: project name

text: uncultured Flavobacteriaceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR4831646_binner13_Refined_21


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1793862 of study SRP039390.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured Schlesneria sp.

characteristic: sample derived from

text: uncultured Schlesneria sp.

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1793862_metabat2_18


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured bacterium

text: uncultured bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR1787940_binner12_Refined_18

characteristic: title


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1788318 of study SRP039390.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured Bordetella sp.

characteristic: organism

characteristic: project name

text: uncultured Bordetella sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1788318_concoct_82


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1790676 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Brazil

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1790676_binner12_Refined_29


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1209976 of study SRP039390.

characteristic: description

text: amazon

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Richelia intracellularis

text: Richelia intracellularis

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR1209976_binner23_Refined_3

characteristic: title


characteristic: ENA-CHECKLIST

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1793861 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Brazil

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured Sphingobacteriales bacterium

characteristic: organism

characteristic: project name

text: uncultured Sphingobacteriales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1793861_concoct_7


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: MGnify-genomes-generation-pipeline_v1.0.0

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1786281 of study SRP039390.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1786281_concoct_35


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1796236 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Brazil

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured bacterium

text: This project focuses on the Amazon River-to-tropical Atlantic Ocean continuum because of both its immense scale and its apparent sensitivity to climate variability and anthropogenic forcing. The river’s effect on the ocean depends not only on the river hydrology, but what the river carries and how those components are modified during transit from their terrestrial or aquatic origins. We brought together limnologists and oceanographers in an integrated project to improve our understanding of carbon exchange between the atmosphere and this tropical river continuum, focusing on the lower reach, nearshore, and offshore tropical Atlantic, with the goal of improving predictive capabilities under differing climate change scenarios.

text: uncultured bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR1796236_concoct_41

characteristic: title


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR4831644 of study SRP039390.

characteristic: description

text: amazon

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured Oceanospirillaceae bacterium

characteristic: organism

characteristic: project name

text: uncultured Oceanospirillaceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR4831644_concoct_31


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Brazil

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1796236_concoct_28


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1183650 of study SRP039390.

characteristic: description

text: amazon

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured Prochlorococcus sp.

text: uncultured Prochlorococcus sp.

text: Illumina Genome Analyzer IIx

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR1183650_binner12_Refined_1

characteristic: title


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1796118 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Brazil

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured Acidimicrobiaceae bacterium

characteristic: organism

characteristic: project name

text: uncultured Acidimicrobiaceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR1796118_binner12_Refined_30


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1790644 of study SRP039390.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1790644_metabat2_1


characteristic: ENA-CHECKLIST

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1796234 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Brazil

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured Limnohabitans sp.

text: uncultured Limnohabitans sp.

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR1796234_binner12_Refined_34

characteristic: title


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: MGnify-genomes-generation-pipeline_v1.0.0

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR4831645 of study SRP039390.

characteristic: description

text: amazon

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured Sphingobacteriales bacterium

characteristic: organism

characteristic: project name

text: uncultured Sphingobacteriales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR4831645_binner123_Refined_4


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1790487 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Brazil

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured Methylophilaceae bacterium

text: This project focuses on the Amazon River-to-tropical Atlantic Ocean continuum because of both its immense scale and its apparent sensitivity to climate variability and anthropogenic forcing. The river’s effect on the ocean depends not only on the river hydrology, but what the river carries and how those components are modified during transit from their terrestrial or aquatic origins. We brought together limnologists and oceanographers in an integrated project to improve our understanding of carbon exchange between the atmosphere and this tropical river continuum, focusing on the lower reach, nearshore, and offshore tropical Atlantic, with the goal of improving predictive capabilities under differing climate change scenarios.

characteristic: sample derived from

text: uncultured Methylophilaceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1790487_concoct_47


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1790489 of study SRP039390.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured Ignavibacteriales bacterium

text: uncultured Ignavibacteriales bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR1790489_concoct_17

characteristic: title


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1205250 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Atlantic Ocean

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured Synechococcus sp.

characteristic: organism

characteristic: project name

text: uncultured Synechococcus sp.

text: Illumina Genome Analyzer IIx

text: multi-marker approach

text: Metagenome-assembled genome: SRR1205250_binner12_Refined_13


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1185413 of study SRP039390.

characteristic: description

text: amazon

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured Rhodobacterales bacterium

characteristic: sample derived from

text: uncultured Rhodobacterales bacterium

text: Illumina Genome Analyzer IIx

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1185413_concoct_48


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1788318 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Brazil

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured bacterium

text: uncultured bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR1788318_concoct_51

characteristic: title


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1209977 of study SRP039390.

characteristic: description

text: amazon

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured Candidatus Rokubacteria bacterium

characteristic: organism

characteristic: project name

text: Illumina Genome Analyzer IIx

text: multi-marker approach

text: Metagenome-assembled genome: SRR1209977_metabat2_15


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR4831650 of study SRP039390.

text: amazon

characteristic: environmental medium

text: Atlantic Ocean

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured euryarchaeote

characteristic: sample derived from

text: uncultured euryarchaeote

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR4831650_binner13_Refined_6


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1796118 of study SRP039390.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: Delftia acidovorans

text: This project focuses on the Amazon River-to-tropical Atlantic Ocean continuum because of both its immense scale and its apparent sensitivity to climate variability and anthropogenic forcing. The river’s effect on the ocean depends not only on the river hydrology, but what the river carries and how those components are modified during transit from their terrestrial or aquatic origins. We brought together limnologists and oceanographers in an integrated project to improve our understanding of carbon exchange between the atmosphere and this tropical river continuum, focusing on the lower reach, nearshore, and offshore tropical Atlantic, with the goal of improving predictive capabilities under differing climate change scenarios.

text: Delftia acidovorans

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR1796118_binner123_Refined_6

characteristic: title


characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: aqua

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: amazon

characteristic: environmental medium

text: Atlantic Ocean

text: metagenome-assembled genome

characteristic: investigation type

text: aquatic metagenome

text: water

text: aquatic metagenome

text: uncultured Flavobacteriales bacterium

characteristic: organism

characteristic: project name

text: uncultured Flavobacteriales bacterium

text: Illumina Genome Analyzer IIx

text: multi-marker approach

text: Metagenome-assembled genome: SRR1205250_binner12_Refined_6


characteristic: ENA first public

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: aqua

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR1790678 of study SRP039390.

characteristic: description

text: amazon

text: Brazil

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: aquatic metagenome

text: water

characteristic: local environmental context

text: aquatic metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR1790678_binner123_Refined_8