E-MTAB-12808_4:Sample 93

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12808_4:Sample 93

characteristic: Submitter Id

characteristic: age

characteristic: aspartate aminotransferase measurement

characteristic: ballooning

characteristic: body weight

text: ArrayExpress

characteristic: broker name

characteristic: cholesterol

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: comparison group name

characteristic: description

characteristic: developmental stage

characteristic: diet group

text: non-alcoholic fatty liver disease

characteristic: disease

text: NAFLD

text: GA

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Liver

text: Mus musculus

text: male

text: ob/ob

text: Sample 93

characteristic: title


E-MTAB-12808_4:Sample 94

status: PUBLIC

characteristic: ENA first public

tag: attribute

characteristic: ENA-CHECKLIST

text: TVP Lab, WT/MRC Institute of Metabolic Science, University of Cambridge, United Kingdom

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12808_4:Sample 94

characteristic: Submitter Id

unit: week

unit: milli-International Unit per milliliter

unit: gram

text: ArrayExpress

text: not collected

text: house mouse

text: Protocols: Murine tissues for protein or RNA extraction were frozen at the time of collection and stored at -80. Since the murine data are derived from multiple partners, different RNA extraction methods have been used (miRNAeasy Mini Kits; Qiagen, RNeasy, Trizol; Qiagen, STAT-60, Trizol reagent; thermofisher, LifeTech Magmax-96) according to the manufacturer’s instructions. All reagents, plastic ware, and supplies used were nuclease-free, sterile, and of molecular biology grade. RNA Integrity Number (RIN) of 8 was considered the lowest cut-off for RNA sequencing. RNA from tissues (1 ug RNA) were used to generate barcoded sequencing libraries using Illumina TruSeq® Stranded mRNA Library Preparation Kit (Illumina) following manufacturer’s instructions.

text: non-alcoholic fatty liver disease

text: NAFLD

characteristic: disease staging

characteristic: duration of experimental diet

characteristic: fibrosis

text: GA

characteristic: genotype

text: not collected

characteristic: individual

characteristic: inflammation

text: not applicable

characteristic: isolate

characteristic: liver weight to body weight (%)

characteristic: model name

characteristic: nas score

text: Mus musculus

text: Mus musculus

text: Liver

characteristic: organism part

text: Mus musculus

characteristic: serum alanine aminotransferase measurement

text: male

characteristic: sex

characteristic: steatosis

text: ob/ob

characteristic: strain

text: Sample 94

characteristic: triglyceride


E-MTAB-12808_4:Sample 95

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12808_4:Sample 95

characteristic: Submitter Id

characteristic: age

characteristic: aspartate aminotransferase measurement

characteristic: ballooning

characteristic: body weight

text: ArrayExpress

characteristic: broker name

characteristic: cholesterol

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: comparison group name

characteristic: description

characteristic: developmental stage

characteristic: diet group

text: non-alcoholic fatty liver disease

characteristic: disease

text: NAFLD

text: GA

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Liver

text: Mus musculus

text: male

text: ob/ob

text: Sample 95

characteristic: title


E-MTAB-12808_4:Sample 96

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12808_4:Sample 96

characteristic: Submitter Id

text: ArrayExpress

text: not collected

text: house mouse

text: non-alcoholic fatty liver disease

text: NAFLD

characteristic: disease staging

characteristic: duration of experimental diet

characteristic: fibrosis

text: GA

characteristic: genotype

text: not collected

characteristic: individual

characteristic: inflammation

text: not applicable

characteristic: isolate

characteristic: liver weight to body weight (%)

characteristic: model name

characteristic: nas score

text: Mus musculus

text: Mus musculus

text: Liver

characteristic: organism part

text: Mus musculus

characteristic: serum alanine aminotransferase measurement

text: male

characteristic: sex

characteristic: steatosis

text: ob/ob

characteristic: strain

text: Sample 96

characteristic: triglyceride


E-MTAB-12808_4:Sample 97

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12808_4:Sample 97

characteristic: Submitter Id

characteristic: age

characteristic: aspartate aminotransferase measurement

characteristic: ballooning

characteristic: body weight

text: ArrayExpress

characteristic: broker name

characteristic: cholesterol

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

characteristic: comparison group name

characteristic: description

characteristic: developmental stage

characteristic: diet group

text: non-alcoholic fatty liver disease

characteristic: disease

text: NAFLD

text: GA

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: Liver

text: Mus musculus

text: male

text: ob/ob

text: Sample 97

characteristic: title


E-MTAB-12808_4:Sample 98

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12808_4:Sample 98

characteristic: Submitter Id

text: ArrayExpress

text: not collected

text: house mouse

text: non-alcoholic fatty liver disease

text: NAFLD

characteristic: disease staging

characteristic: duration of experimental diet

characteristic: fibrosis

text: GA

characteristic: genotype

text: not collected

characteristic: individual

characteristic: inflammation

text: not applicable

characteristic: isolate

characteristic: liver weight to body weight (%)

characteristic: model name

characteristic: nas score

text: Mus musculus

text: Mus musculus

text: Liver

characteristic: organism part

text: Mus musculus

characteristic: serum alanine aminotransferase measurement

text: male

characteristic: sex

characteristic: steatosis

text: ob/ob

characteristic: strain

text: Sample 98

characteristic: triglyceride


E-MTAB-12808_4:Sample 99

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-12808_4:Sample 99

characteristic: Submitter Id

characteristic: age

characteristic: aspartate aminotransferase measurement

characteristic: ballooning

characteristic: body weight

text: ArrayExpress

characteristic: broker name

characteristic: cholesterol

text: not collected

characteristic: collection date

text: Norway rat

characteristic: common name

text: R-CDAA-4W, R-CDAA-C2-4W

characteristic: comparison group name

characteristic: description

characteristic: developmental stage

text: CTRL

characteristic: diet group

text: Healthy

characteristic: disease

text: CTRL

text: WT

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: Liver

text: Rattus norvegicus

text: male

text: RjHan:Wi

text: Sample 99

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Lorraine University

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:247-83235

characteristic: Submitter Id

text: not provided

text: Alkaline Fragmentation,Oxo8G 38mer,Untreated,Technical replicate 6

text: France

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G untreated repl 6


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:247-83236

text: not provided

text: Mg2+ Fragmentation,Oxo8G 38mer,Untreated,Technical replicate 6

text: France

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G Mg2+ frag untreated repl 6


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:247-83237

text: not provided

text: Alkaline Fragmentation,Oxo8G 38mer,Untreated,Technical replicate 4

text: France

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G untreated repl 4


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:247-83238

text: not provided

text: Mg2+ Fragmentation,Oxo8G 38mer,Untreated,Technical replicate 4

text: France

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G Mg2+ frag untreated repl 4


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:247-83239

text: not provided

text: Alkaline Fragmentation,Oxo8G 38mer,Untreated,Technical replicate 5

text: France

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G untreated repl 5


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:247-83240

text: not provided

text: Mg2+ Fragmentation,Oxo8G 38mer,Untreated,Technical replicate 5

text: France

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G Mg2+ frag untreated repl 5


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:247-83241

text: not provided

text: human

text: Mg2+ Fragmentation,IVT tRNA Asp,0 uM Cl2,Experimental replicate 1

text: France

text: Homo sapiens

text: Homo sapiens

text: H.sapiens IVT tRNAAsp Mg2+ frag 0 uM Cl2 repl 1


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:247-83242

text: not provided

text: human

text: Mg2+ Fragmentation,IVT tRNA Asp,25 uM Cl2,Experimental replicate 1

text: France

text: Homo sapiens

text: Homo sapiens

text: H.sapiens IVT tRNAAsp Mg2+ frag 25 uM Cl2 repl 1


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:247-83243

text: not provided

text: human

text: Mg2+ Fragmentation,IVT tRNA Asp,50 uM Cl2,Experimental replicate 1

text: France

text: Homo sapiens

text: Homo sapiens

text: H.sapiens IVT tRNAAsp Mg2+ frag 50 uM Cl2 repl 1


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:247-83244

text: not provided

text: human

text: Mg2+ Fragmentation,IVT tRNA Asp,0 uM Cl2,Experimental replicate 2

text: France

text: Homo sapiens

text: Homo sapiens

text: H.sapiens IVT tRNAAsp Mg2+ frag 0 uM Cl2 repl 2


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:247-83245

text: not provided

text: human

text: Mg2+ Fragmentation,IVT tRNA Asp,25 uM Cl2,Experimental replicate 2

text: France

text: Homo sapiens

text: Homo sapiens

text: H.sapiens IVT tRNAAsp Mg2+ frag 25 uM Cl2 repl 2


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:247-83246

text: not provided

text: human

text: Mg2+ Fragmentation,IVT tRNA Asp,50 uM Cl2,Experimental replicate 2

text: France

text: Homo sapiens

text: Homo sapiens

text: H.sapiens IVT tRNAAsp Mg2+ frag 50 uM Cl2 repl 2


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:247-83247

text: not provided

text: human

text: Mg2+ Fragmentation,IVT tRNA Asp,0 uM Cl2,Experimental replicate 3

text: France

text: Homo sapiens

text: Homo sapiens

text: H.sapiens IVT tRNAAsp Mg2+ frag 0 uM Cl2 repl 3


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:247-83248

text: not provided

text: human

text: Mg2+ Fragmentation,IVT tRNA Asp,25 uM Cl2,Experimental replicate 3

text: France

text: Homo sapiens

text: Homo sapiens

text: H.sapiens IVT tRNAAsp Mg2+ frag 25 uM Cl2 repl 3


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:247-83249

text: not provided

text: human

text: Mg2+ Fragmentation,IVT tRNA Asp,50 uM Cl2,Experimental replicate 3

text: France

text: Homo sapiens

text: Homo sapiens

text: H.sapiens IVT tRNAAsp Mg2+ frag 50 uM Cl2 repl 3


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:247-83250

text: not provided

text: brewer's yeast

text: Alkaline Fragmentation,invivo treated yeast rRNA,0 uM Cl2,Biological replicate 1

text: France

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: S.cerevisiae in vivo rRNA 0 uM Cl2 repl 1


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:247-83251

text: not provided

text: brewer's yeast

text: Alkaline Fragmentation,invivo treated yeast rRNA,1000 uM Cl2,Biological replicate 1

text: France

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: S.cerevisiae in vivo rRNA 1000 uM Cl2 repl 1


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:247-83252

text: not provided

text: brewer's yeast

text: Alkaline Fragmentation,invivo treated yeast rRNA,0 uM Cl2,Biological replicate 2

text: France

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: S.cerevisiae in vivo rRNA 0 uM Cl2 repl 2


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:247-83253

text: not provided

text: brewer's yeast

text: Alkaline Fragmentation,invivo treated yeast rRNA,1000 uM Cl2,Biological replicate 2

text: France

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: S.cerevisiae in vivo rRNA 1000 uM Cl2 repl 2


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:247-83254

text: not provided

text: brewer's yeast

text: Alkaline Fragmentation,invivo treated yeast rRNA,0 uM Cl2,Biological replicate 3

text: France

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: S.cerevisiae in vivo rRNA 0 uM Cl2 repl 3


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83255

text: not provided

text: brewer's yeast

text: Alkaline Fragmentation,invivo treated yeast rRNA,1000 uM Cl2,Biological replicate 3

text: France

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: S.cerevisiae in vivo rRNA 1000 uM Cl2 repl 3


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83256

text: not provided

text: Mg2+ Fragmentation,Unmodified 38mer,Untreated,Techinical replicate 1

text: France

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo unmodified Mg2+ frag untreated repl 1


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83257

text: not provided

text: Mg2+ Fragmentation,Unmodified 38mer,Untreated,Techinical replicate 2

text: France

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo unmodified Mg2+ frag untreated repl 2


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83258

text: not provided

text: Mg2+ Fragmentation,Unmodified 38mer,Untreated,Techinical replicate 3

text: France

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo unmodified Mg2+ frag untreated repl 3


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83259

text: not provided

text: Mg2+ Fragmentation,Oxo8G 38mer,Untreated,Technical replicate 1

text: France

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G Mg2+ frag untreated repl 1


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83260

text: not provided

text: Mg2+ Fragmentation,Oxo8G 38mer,Untreated,Technical replicate 2

text: France

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G Mg2+ frag untreated repl 2


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83261

text: not provided

text: Mg2+ Fragmentation,Oxo8G 38mer,Untreated,Technical replicate 3

text: France

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G Mg2+ frag untreated repl 3


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83262

text: not provided

text: brewer's yeast

text: Alkaline Fragmentation,invitro treated naked yeast rRNA,0 uM Cl2,Biological replicate 1

text: France

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: S.cerevisiae rRNA 0 uM Cl2 repl 1


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83263

text: not provided

text: brewer's yeast

text: Alkaline Fragmentation,invitro treated naked yeast rRNA,10 uM Cl2,Biological replicate 1

text: France

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: S.cerevisiae rRNA 10 uM Cl2 repl 1


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83264

text: not provided

text: brewer's yeast

text: Alkaline Fragmentation,invitro treated naked yeast rRNA,0 uM Cl2,Biological replicate 2

text: France

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: S.cerevisiae rRNA 0 uM Cl2 repl 2


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83265

text: not provided

text: brewer's yeast

text: Alkaline Fragmentation,invitro treated naked yeast rRNA,10 uM Cl2,Biological replicate 2

text: France

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: S.cerevisiae rRNA 10 uM Cl2 repl 2


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83266

text: not provided

text: brewer's yeast

text: Alkaline Fragmentation,invitro treated naked yeast rRNA,0 uM Cl2,Biological replicate 3

text: France

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: S.cerevisiae rRNA 0 uM Cl2 repl 3


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83267

text: not provided

text: brewer's yeast

text: Alkaline Fragmentation,invitro treated naked yeast rRNA,10 uM Cl2,Biological replicate 3

text: France

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: S.cerevisiae rRNA 10 uM Cl2 repl 3


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83268

text: not provided

text: brewer's yeast

text: Alkaline Fragmentation,invitro treated yeast ribosomes,0 uM Cl2,Biological replicate 1

text: France

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: S.cerevisiae ribosomes 0 uM Cl2 repl 1


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83269

text: not provided

text: brewer's yeast

text: Alkaline Fragmentation,invitro treated yeast ribosomes,25 uM Cl2,Biological replicate 1

text: France

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: S.cerevisiae ribosomes 25 uM Cl2 repl 1


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83270

text: not provided

text: brewer's yeast

text: Alkaline Fragmentation,invitro treated yeast ribosomes,0 uM Cl2,Biological replicate 2

text: France

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: S.cerevisiae ribosomes 0 uM Cl2 repl 2


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83271

text: not provided

text: brewer's yeast

text: Alkaline Fragmentation,invitro treated yeast ribosomes,25 uM Cl2,Biological replicate 2

text: France

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae

text: S.cerevisiae ribosomes 25 uM Cl2 repl 2


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83272

text: not provided

text: Mg2+ Fragmentation,Oxo8G Oligo,0 uM Cl2,Experimental replicate 1

text: France

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G Mg2+ frag 0 uM Cl2 repl 1


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83273

text: not provided

text: Mg2+ Fragmentation,Oxo8G Oligo,25 uM Cl2,Experimental replicate 1

text: France

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G Mg2+ frag 25 uM Cl2 repl 1


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83274

text: not provided

text: Mg2+ Fragmentation,Oxo8G Oligo,50 uM Cl2,Experimental replicate 1

text: France

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G Mg2+ frag 50 uM Cl2 repl 1


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83275

text: not provided

text: Mg2+ Fragmentation,Oxo8G Oligo,0 uM Cl2,Experimental replicate 2

text: France

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G Mg2+ frag 0 uM Cl2 repl 2


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83276

text: not provided

text: Mg2+ Fragmentation,Oxo8G Oligo,25 uM Cl2,Experimental replicate 2

text: France

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G Mg2+ frag 25 uM Cl2 repl 2


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83277

text: not provided

text: Mg2+ Fragmentation,Oxo8G Oligo,50 uM Cl2,Experimental replicate 2

text: France

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G Mg2+ frag 50 uM Cl2 repl 2


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83278

text: not provided

text: Mg2+ Fragmentation,Oxo8G Oligo,25 uM Cl2,Experimental replicate 3

text: France

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G Mg2+ frag 25 uM Cl2 repl 3


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83279

text: not provided

text: Mg2+ Fragmentation,Oxo8G Oligo,0 uM Cl2,Experimental replicate 3

text: France

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G Mg2+ frag 0 uM Cl2 repl 3


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83280

text: not provided

text: Mg2+ Fragmentation,Oxo8G Oligo,50 uM Cl2,Experimental replicate 3

text: France

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G Mg2+ frag 50 uM Cl2 repl 3


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83281

text: not provided

text: Alkaline Fragmentation,Unmodified 38mer,Untreated,Technical replicate 1

text: Germany

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo unmodified untreated repl 1


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:248-83282

text: not provided

text: Alkaline Fragmentation,Unmodified 38mer,Untreated,Technical replicate 2

text: Germany

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo unmodified untreated repl 2


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:249-83283

text: not provided

text: Alkaline Fragmentation,Unmodified 38mer,Untreated,Technical replicate 3

text: Germany

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo unmodified untreated repl 3


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:249-83284

text: not provided

text: Alkaline Fragmentation,Oxo8G 38mer,Untreated,Technical replicate 1

text: Germany

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G untreated repl 1


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:249-83285

text: not provided

text: Alkaline Fragmentation,Oxo8G 38mer,Untreated,Technical replicate 2

text: Germany

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G untreated repl 2


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:249-83286

text: not provided

text: Alkaline Fragmentation,Oxo8G 38mer,Untreated,Technical replicate 3

text: Germany

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G untreated repl 3


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:249-83287

text: not provided

text: Alkaline Fragmentation,Oxo8G Oligo,0 uM Cl2,Experimental replicate 1

text: Germany

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G 0 uM Cl2 repl 1


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:249-83288

text: not provided

text: Alkaline Fragmentation,Oxo8G Oligo,25 uM Cl2,Experimental replicate 1

text: Germany

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G 25 uM Cl2 repl 1


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:249-83289

text: not provided

text: Alkaline Fragmentation,Oxo8G Oligo,50 uM Cl2,Experimental replicate 1

text: Germany

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G 50 uM Cl2 repl 1


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:249-83290

text: not provided

text: Alkaline Fragmentation,Oxo8G Oligo,0 uM Cl2,Experimental replicate 2

text: Germany

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G 0 uM Cl2 repl 2


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:249-83291

text: not provided

text: Alkaline Fragmentation,Oxo8G Oligo,25 uM Cl2,Experimental replicate 2

text: Germany

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G 25 uM Cl2 repl 2


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:249-83292

text: not provided

text: Alkaline Fragmentation,Oxo8G Oligo,50 uM Cl2,Experimental replicate 2

text: Germany

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G 50 uM Cl2 repl 2


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:249-83293

text: not provided

text: Alkaline Fragmentation,Oxo8G Oligo,25 uM Cl2,Experimental replicate 3

text: Germany

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G 25 uM Cl2 repl 3


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:249-83294

text: not provided

text: Alkaline Fragmentation,Oxo8G Oligo,0 uM Cl2,Experimental replicate 3

text: Germany

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G 0 uM Cl2 repl 3


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:249-83295

text: not provided

text: Alkaline Fragmentation,Oxo8G Oligo,50 uM Cl2,Experimental replicate 3

text: Germany

text: synthetic RNA

text: synthetic RNA

text: Synthetic RNA oligo oxo8G 50 uM Cl2 repl 3


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:249-83296

text: not provided

text: human

text: Alkaline Fragmentation,IVT human tRNA Asp,0 uM Cl2,Experimental replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens

text: H.sapiens IVT tRNAAsp  0 uM Cl2 repl 1


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:249-83297

text: not provided

text: human

text: Alkaline Fragmentation,IVT human tRNA Asp,25 uM Cl2,Experimental replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens

text: H.sapiens IVT tRNAAsp  25 uM Cl2 repl 1


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:249-83298

text: not provided

text: human

text: Alkaline Fragmentation,IVT human tRNA Asp,50 uM Cl2,Experimental replicate 1

text: Germany

text: Homo sapiens

text: Homo sapiens

text: H.sapiens IVT tRNAAsp  50 uM Cl2 repl 1


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:249-83299

text: not provided

text: human

text: Alkaline Fragmentation,IVT human tRNA Asp,0 uM Cl2,Experimental replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens

text: H.sapiens IVT tRNAAsp  0 uM Cl2 repl 2


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:249-83300

text: not provided

text: human

text: Alkaline Fragmentation,IVT human tRNA Asp,25 uM Cl2,Experimental replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens

text: H.sapiens IVT tRNAAsp  25 uM Cl2 repl 2


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:249-83301

text: not provided

text: human

text: Alkaline Fragmentation,IVT human tRNA Asp,50 uM Cl2,Experimental replicate 2

text: Germany

text: Homo sapiens

text: Homo sapiens

text: H.sapiens IVT tRNAAsp  50 uM Cl2 repl 2


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:249-83302

text: not provided

text: human

text: Alkaline Fragmentation,IVT human tRNA Asp,0 uM Cl2,Experimental replicate 3

text: Germany

text: Homo sapiens

text: Homo sapiens

text: H.sapiens IVT tRNAAsp  0 uM Cl2 repl 3


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:249-83303

text: not provided

text: human

text: Alkaline Fragmentation,IVT human tRNA Asp,25 uM Cl2,Experimental replicate 3

text: Germany

text: Homo sapiens

text: Homo sapiens

text: H.sapiens IVT tRNAAsp  25 uM Cl2 repl 3


text: Lorraine University

text: public

text: ena-SAMPLE-TAB-15-03-2024-18:57:27:249-83304

text: not provided

text: human

text: Alkaline Fragmentation,IVT human tRNA Asp,50 uM Cl2,Experimental replicate 3

text: Germany

text: Homo sapiens

text: Homo sapiens

text: H.sapiens IVT tRNAAsp  50 uM Cl2 repl 3


characteristic: GISAID Accession ID

text: Dutch COVID-19 response team

text: public

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

characteristic: broker name

text: not provided

characteristic: collecting institution

text: Dutch COVID-19 response team

characteristic: collector name

text: Human coronavirus 2019

text: A SARS-CoV-2 specfic multiplex PCR for Nanopore sequencing was performed, similar to amplicon-based approaches as previously described. In short, primers for 86 overlapping amplicons spanning the entire genome were designed using primal. The amplicon length was set to 500bp with 75bp overlap between the different amplicons. The libraries were generated using the native barcode kits from Nanopore (EXP-NBD104 and EXP-NBD114 and SQK-LSK109) and sequenced on a R9.4 flow cell multiplexing up to 24 samples per sequence run. Raw data was demultiplexed, amplicon primers were trimmed and human data was removed by mapping against the human reference genome.

text: Netherlands

text: Zuid-Holland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: restricted access

characteristic: host subject id

characteristic: isolate

text: Throat/Nasal

characteristic: isolation source host-associated

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: Dutch COVID-19 response sample sequencing


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Dutch COVID-19 response team

characteristic: INSDC center name

text: public

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: not provided

characteristic: collection date

text: Dutch COVID-19 response team

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Zeeland

text: Human

text: not collected

text: Homo sapiens

text: not provided

text: restricted access

text: Throat/Nasal

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

text: Dutch COVID-19 response team

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

characteristic: broker name

text: not provided

characteristic: collecting institution

text: Dutch COVID-19 response team

characteristic: collector name

text: Human coronavirus 2019

text: Netherlands

text: Noord-Brabant

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not collected

text: Homo sapiens

text: not provided

text: restricted access

text: Throat/Nasal


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Dutch COVID-19 response team

text: public

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: not provided

text: Dutch COVID-19 response team

text: Human coronavirus 2019

text: Netherlands

text: Zuid-Holland

text: Human

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: restricted access

characteristic: host subject id

characteristic: isolate

text: Lysis

characteristic: isolation source host-associated

characteristic: sample capture status


characteristic: GISAID Accession ID

text: Dutch COVID-19 response team

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: not provided

characteristic: collection date

text: Dutch COVID-19 response team

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Friesland

text: Human

text: not collected

text: Homo sapiens

text: not provided

text: restricted access

text: Throat/Nasal

characteristic: organism

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Dutch COVID-19 response team

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

characteristic: broker name

text: not provided

characteristic: collecting institution

text: Dutch COVID-19 response team

characteristic: collector name

text: Human coronavirus 2019

text: Netherlands

text: Gelderland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not collected

text: Homo sapiens

text: not provided

text: restricted access

text: Throat/Nasal


characteristic: GISAID Accession ID

text: Dutch COVID-19 response team

characteristic: INSDC center name

text: public

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: not provided

text: Dutch COVID-19 response team

text: Human coronavirus 2019

text: Netherlands

text: Noord-Holland

text: Human

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: restricted access

characteristic: host subject id

characteristic: isolate

text: Throat/Nasal

characteristic: isolation source host-associated

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Dutch COVID-19 response team

text: public

characteristic: INSDC status

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: not provided

characteristic: collection date

text: Dutch COVID-19 response team

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Noord-Brabant

text: Human

text: not collected

text: Homo sapiens

text: not provided

text: restricted access

text: not provided

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

text: Dutch COVID-19 response team

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

characteristic: broker name

text: not provided

characteristic: collecting institution

text: Dutch COVID-19 response team

characteristic: collector name

text: Human coronavirus 2019

text: Netherlands

text: Zuid-Holland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not collected

text: Homo sapiens

text: not provided

text: restricted access

text: not provided


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Dutch COVID-19 response team

text: public

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: not provided

text: Dutch COVID-19 response team

text: Human coronavirus 2019

text: Netherlands

text: Noord-Holland

text: Human

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: restricted access

characteristic: host subject id

characteristic: isolate

text: not provided

characteristic: isolation source host-associated

characteristic: sample capture status


characteristic: GISAID Accession ID

text: Dutch COVID-19 response team

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: ERASMUS MC, UNIVERISTY MEDICAL CENTER

text: not provided

characteristic: collection date

text: Dutch COVID-19 response team

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Noord-Brabant

text: Human

text: not collected

text: Homo sapiens

text: not provided

text: restricted access

text: Lysis

characteristic: organism

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: UNIBE-IG

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: domestic cat

text: Domestic Shorthair - female

text: Switzerland

text: Felis catus

text: Felis catus


text: UNIBE-IG

text: public

text: domestic cat

text: Bengal-female

text: Switzerland

text: Felis catus

text: Felis catus


text: UNIBE-IG

text: public

text: domestic cat

text: European cat - male

text: Switzerland

text: Felis catus

text: Felis catus


text: UNIBE-IG

text: public

text: domestic cat

text: Ragdoll - female

text: Switzerland

text: Felis catus

text: Felis catus


text: UNIBE-IG

text: public

text: domestic cat

text: not purebred (European Domestic Longhair) - male

text: Switzerland

text: Felis catus

text: Felis catus


text: UNIBE-IG

text: public

text: domestic cat

text: Maine Coon - female

text: Switzerland

text: Felis catus

text: Felis catus


text: UNIBE-IG

text: public

text: domestic cat

text: Bengal - female

text: Switzerland

text: Felis catus

text: Felis catus


text: UNIBE-IG

text: public

text: domestic cat

text: Domestic Mediumhair - male

text: Switzerland

text: Felis catus

text: Felis catus


text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run ERR594339 of study ERP001737.

text: tara

characteristic: environmental medium

text: not provided

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

text: Seawater was filtered from different depths to retain small cell sizes. The DNA was extracted and submitted to high throughput sequencing.

characteristic: project name

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR594339_concoct_102


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Respiratory Virus Unit, Microbiology Services Colindale, Public Health England

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: receipt date

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

characteristic: title

text: not provided

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Originating lab: Wales Specialist Virology Centre Sequencing lab: Pathogen Genomics Unit

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

text: not provided

text: United Kingdom

text: Wales

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

text: not provided

text: not provided


text: SC

text: public

text: SC

text: Rosalind Franklin Laboratory

text: not provided

characteristic: collector name

text: Samples prepared at Rosalind Franklin Laboratory by Donald Fraser, Suki Lee, Rob Howes, The Rosalind Franklin Laboratory and Alex Alderton, Roberto Amato, Jeffrey Barrett, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

text: public

text: Erna King/Oleksandr Holovachov

text: SANGER INSTITUTE

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Cambridgeshire | Hinxton

text: Soil under beech tree

characteristic: habitat

text: Oleksandr Holovachov

text: Swedish Museum of Natural History

text: adult

characteristic: lifestage

text: Mylonchulus obliquus

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

characteristic: project name

text: Mylonchulus obliquus

text: FEMALE

characteristic: sex

text: NOT PROVIDED

text: N

characteristic: symbiont

characteristic: title

characteristic: tolid


text: Sanger Institute

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Erna King/Oleksandr Holovachov

text: SANGER INSTITUTE

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Cambridgeshire | Hinxton

characteristic: geographic location (region and locality)

text: Soil under beech tree

text: Oleksandr Holovachov

text: Swedish Museum of Natural History

text: adult

text: Mylonchulus obliquus

text: WHOLE ORGANISM

characteristic: sample same as

text: Mylonchulus obliquus

text: FEMALE

text: NOT PROVIDED

text: N


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: BSC (Barcelona Supercomputing Center)

text: public

text: CNAG-CRG

characteristic: broker name

text: Neiker

text: Neiker

text: brown spot needle blight

characteristic: common name

text: Spain

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: ohianberri

text: Pine tree forest

characteristic: habitat

characteristic: lifestage

text: Lecanosticta acicola

characteristic: original collection date

text: Lecanosticta acicola

text: Lecanosticta acicola DNA sample


text: BSC (Barcelona Supercomputing Center)

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: CNAG-CRG

text: Neiker

text: Neiker

text: brown spot needle blight

text: Spain

text: amoroto

text: Pine tree forest

text: Lecanosticta acicola

characteristic: organism

characteristic: organism part

text: Lecanosticta acicola

characteristic: sex

text: Lecanosticta acicola DNA sample

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: BSC (Barcelona Supercomputing Center)

text: public

text: CNAG-CRG

characteristic: broker name

text: Neiker

text: Neiker

characteristic: collecting institution

characteristic: collection date

text: brown spot needle blight

text: Spain

characteristic: geographic location (country and/or sea)

text: Pine tree forest

text: Lecanosticta acicola

text: Lecanosticta acicola

text: Lecanosticta acicola DNA sample


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Wellcome Sanger Institute | Insectary

characteristic: geographic location (region and locality)

text: Terrestrial

characteristic: habitat

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

text: WHOLE ORGANISM

text: ToL

characteristic: project name

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N

characteristic: symbiont

characteristic: tolid


text: Sanger Institute

text: MB DNA 1

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

characteristic: lifestage

text: Anopheles coluzzii

characteristic: organism

text: POSTERIOR BODY

characteristic: organism part

characteristic: sample derived from

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: MB DNA 10

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

text: POSTERIOR BODY

text: Anopheles coluzzii

text: NOT COLLECTED

characteristic: sex

text: NOT APPLICABLE

text: N

characteristic: title


text: Sanger Institute

characteristic: GAL

text: MB DNA 11

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Wellcome Sanger Institute | Insectary

characteristic: geographic location (region and locality)

text: Terrestrial

characteristic: habitat

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

text: POSTERIOR BODY

characteristic: project name

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N

characteristic: symbiont


text: Sanger Institute

text: MB DNA 12

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

characteristic: lifestage

text: Anopheles coluzzii

characteristic: organism

text: POSTERIOR BODY

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N

characteristic: tolid


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: MB DNA 13

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

text: POSTERIOR BODY

characteristic: organism part

characteristic: sample derived from

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N


text: Sanger Institute

characteristic: GAL

text: MB DNA 14

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Wellcome Sanger Institute | Insectary

characteristic: geographic location (region and locality)

text: Terrestrial

characteristic: habitat

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

text: POSTERIOR BODY

text: Anopheles coluzzii

text: NOT COLLECTED

characteristic: sex

text: NOT APPLICABLE

text: N

characteristic: title


text: Sanger Institute

text: MB DNA 15

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

characteristic: lifestage

text: Anopheles coluzzii

text: POSTERIOR BODY

characteristic: project name

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N

characteristic: symbiont


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: MB DNA 16

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

characteristic: organism

text: POSTERIOR BODY

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N

characteristic: tolid


text: Sanger Institute

characteristic: GAL

text: MB DNA 17

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Wellcome Sanger Institute | Insectary

characteristic: geographic location (region and locality)

text: Terrestrial

characteristic: habitat

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

text: POSTERIOR BODY

characteristic: organism part

characteristic: sample derived from

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N


text: Sanger Institute

text: MB DNA 18

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

characteristic: lifestage

text: Anopheles coluzzii

text: POSTERIOR BODY

text: Anopheles coluzzii

text: NOT COLLECTED

characteristic: sex

text: NOT APPLICABLE

text: N

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: MB DNA 19

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

text: POSTERIOR BODY

characteristic: project name

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N

characteristic: symbiont


text: Sanger Institute

characteristic: GAL

text: MB DNA 2

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Wellcome Sanger Institute | Insectary

characteristic: geographic location (region and locality)

text: Terrestrial

characteristic: habitat

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

characteristic: organism

text: POSTERIOR BODY

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N

characteristic: tolid


text: Sanger Institute

text: MB DNA 20

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

characteristic: lifestage

text: Anopheles coluzzii

text: POSTERIOR BODY

characteristic: organism part

characteristic: sample derived from

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: MB DNA 3

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

text: POSTERIOR BODY

text: Anopheles coluzzii

text: NOT COLLECTED

characteristic: sex

text: NOT APPLICABLE

text: N

characteristic: title


text: Sanger Institute

characteristic: GAL

text: MB DNA 4

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Wellcome Sanger Institute | Insectary

characteristic: geographic location (region and locality)

text: Terrestrial

characteristic: habitat

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

text: POSTERIOR BODY

characteristic: project name

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N

characteristic: symbiont


text: Sanger Institute

text: MB DNA 5

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

characteristic: lifestage

text: Anopheles coluzzii

characteristic: organism

text: POSTERIOR BODY

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N

characteristic: tolid


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: MB DNA 6

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

text: POSTERIOR BODY

characteristic: organism part

characteristic: sample derived from

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N


text: Sanger Institute

characteristic: GAL

text: MB DNA 7

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Wellcome Sanger Institute | Insectary

characteristic: geographic location (region and locality)

text: Terrestrial

characteristic: habitat

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

text: POSTERIOR BODY

text: Anopheles coluzzii

text: NOT COLLECTED

characteristic: sex

text: NOT APPLICABLE

text: N

characteristic: title


text: Sanger Institute

text: MB DNA 8

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

characteristic: lifestage

text: Anopheles coluzzii

text: POSTERIOR BODY

characteristic: project name

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N

characteristic: symbiont


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: MB DNA 9

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

characteristic: organism

text: POSTERIOR BODY

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N

characteristic: tolid


text: Sanger Institute

characteristic: GAL

text: MB HiC 1

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Wellcome Sanger Institute | Insectary

characteristic: geographic location (region and locality)

text: Terrestrial

characteristic: habitat

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

text: ANTERIOR BODY

characteristic: organism part

characteristic: sample derived from

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N


text: Sanger Institute

text: MB HiC 10

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

characteristic: lifestage

text: Anopheles coluzzii

text: ANTERIOR BODY

text: Anopheles coluzzii

text: NOT COLLECTED

characteristic: sex

text: NOT APPLICABLE

text: N

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: MB HiC 11

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

text: ANTERIOR BODY

characteristic: project name

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N

characteristic: symbiont


text: Sanger Institute

characteristic: GAL

text: MB HiC 12

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Wellcome Sanger Institute | Insectary

characteristic: geographic location (region and locality)

text: Terrestrial

characteristic: habitat

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

characteristic: organism

text: ANTERIOR BODY

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N

characteristic: tolid


text: Sanger Institute

text: MB HiC 13

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

characteristic: lifestage

text: Anopheles coluzzii

text: ANTERIOR BODY

characteristic: organism part

characteristic: sample derived from

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: MB HiC 14

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

text: ANTERIOR BODY

text: Anopheles coluzzii

text: NOT COLLECTED

characteristic: sex

text: NOT APPLICABLE

text: N

characteristic: title


text: Sanger Institute

characteristic: GAL

text: MB HiC 15

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Wellcome Sanger Institute | Insectary

characteristic: geographic location (region and locality)

text: Terrestrial

characteristic: habitat

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

text: ANTERIOR BODY

characteristic: project name

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N

characteristic: symbiont


text: Sanger Institute

text: MB HiC 16

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

characteristic: lifestage

text: Anopheles coluzzii

characteristic: organism

text: ANTERIOR BODY

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N

characteristic: tolid


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: MB HiC 17

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

text: ANTERIOR BODY

characteristic: organism part

characteristic: sample derived from

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N


text: Sanger Institute

characteristic: GAL

text: MB HiC 18

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Wellcome Sanger Institute | Insectary

characteristic: geographic location (region and locality)

text: Terrestrial

characteristic: habitat

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

text: ANTERIOR BODY

text: Anopheles coluzzii

text: NOT COLLECTED

characteristic: sex

text: NOT APPLICABLE

text: N

characteristic: title


text: Sanger Institute

text: MB HiC 19

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

characteristic: lifestage

text: Anopheles coluzzii

text: ANTERIOR BODY

characteristic: project name

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N

characteristic: symbiont


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: MB HiC 2

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

characteristic: organism

text: ANTERIOR BODY

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N

characteristic: tolid


text: Sanger Institute

characteristic: GAL

text: MB HiC 20

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Wellcome Sanger Institute | Insectary

characteristic: geographic location (region and locality)

text: Terrestrial

characteristic: habitat

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

text: ANTERIOR BODY

characteristic: organism part

characteristic: sample derived from

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N


text: Sanger Institute

text: MB HiC 3

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

characteristic: lifestage

text: Anopheles coluzzii

text: ANTERIOR BODY

text: Anopheles coluzzii

text: NOT COLLECTED

characteristic: sex

text: NOT APPLICABLE

text: N

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: MB HiC 4

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

text: ANTERIOR BODY

characteristic: project name

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N

characteristic: symbiont


text: Sanger Institute

characteristic: GAL

text: MB HiC 5

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Wellcome Sanger Institute | Insectary

characteristic: geographic location (region and locality)

text: Terrestrial

characteristic: habitat

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

characteristic: organism

text: ANTERIOR BODY

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N

characteristic: tolid


text: Sanger Institute

text: MB HiC 6

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

characteristic: lifestage

text: Anopheles coluzzii

text: ANTERIOR BODY

characteristic: organism part

characteristic: sample derived from

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: MB HiC 7

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

text: ANTERIOR BODY

text: Anopheles coluzzii

text: NOT COLLECTED

characteristic: sex

text: NOT APPLICABLE

text: N

characteristic: title


text: Sanger Institute

characteristic: GAL

text: MB HiC 8

text: Tree of Life Programme

text: public

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Wellcome Sanger Institute | Insectary

characteristic: geographic location (region and locality)

text: Terrestrial

characteristic: habitat

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

text: Anopheles coluzzii

text: ANTERIOR BODY

characteristic: project name

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N

characteristic: symbiont


text: Sanger Institute

text: MB HiC 9

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: United Kingdom

text: Wellcome Sanger Institute | Insectary

text: Terrestrial

text: Amjad Khalaf

text: Wellcome Sanger Institute

text: adult

characteristic: lifestage

text: Anopheles coluzzii

characteristic: organism

text: ANTERIOR BODY

text: Anopheles coluzzii

text: NOT COLLECTED

text: NOT APPLICABLE

text: N

characteristic: tolid


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC last update

text: public

tag: Namespace:Department of Dermatology and Venereology, Nanfang Hospital, Southern Medical University

characteristic: collection date

text: Fresh skin tissue

characteristic: description

text: human-associated habitat

characteristic: environment (biome)

text: Microbial

characteristic: environment (feature)

text: Skin

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

text: human-skin

characteristic: human skin environmental package

text: metagenome

characteristic: investigation type

text: skin metagenome

text: skin metagenome

text: Metagenomics Next Generation Sequencing

characteristic: sequencing method

text: Patient 2 chronic wounds biopsy


text: EBI-TEST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: RNA sequencing HepG2NTCP cells infected with HBV 7dpi. No Cas9 treatment.

text: Hepatitis B virus

text: Hepatitis B virus

text: Protocol 1 Control RNA seq

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EBI-TEST

text: public

text: RNA sequencing HepG2NTCP cells infected with HBV 7dpi. Sp5-Cas9 treatment.

text: Hepatitis B virus

characteristic: organism

text: Hepatitis B virus

text: Protocol 1 Sp5 RNA seq


characteristic: External Id

text: EBI-TEST

characteristic: INSDC last update

text: public

text: RNA sequencing HepG2NTCP cells infected with HBV 7dpi. Sp7- Cas9 treatment.

text: Hepatitis B virus

text: Hepatitis B virus

text: Protocol 1 Sp7 RNA seq


text: EBI-TEST

text: public

text: RNA sequencing HepG2NTCP cells infected with HBV 7dpi. Sp5Sp7-Cas9 treatment.

characteristic: description

text: Hepatitis B virus

text: Hepatitis B virus

text: Protocol 1 Sp5+Sp7 RNA seq


text: EBI-TEST

text: public

text: RNA sequencing HepG2NTCP cells infected with HBV 10dpi. No Cas9 treatment.

text: Hepatitis B virus

text: Hepatitis B virus

text: Protocol 2 Control RNA seq


text: EBI-TEST

text: public

text: RNA sequencing HepG2NTCP cells infected with HBV 10dpi. Sp5-Cas9 treatment.

text: Hepatitis B virus

text: Hepatitis B virus

text: Protocol 2 Sp5 RNA seq


text: EBI-TEST

text: public

text: RNA sequencing HepG2NTCP cells infected with HBV 10dpi. Sp7- Cas9 treatment.

text: Hepatitis B virus

text: Hepatitis B virus

text: Protocol 2 Sp7 RNA seq


text: EBI-TEST

text: public

text: RNA sequencing HepG2NTCP cells infected with HBV 10dpi. Sp5Sp7-Cas9 treatment.

text: Hepatitis B virus

text: Hepatitis B virus

text: Protocol 2 Sp5+Sp7 RNA seq


text: EBI-TEST

text: public

text: RNA sequencing HepG2NTCP cells infected with HBV 10dpi. No Cas9 treatment with Lamivudine

text: Hepatitis B virus

text: Hepatitis B virus

text: Protocol 2 + LAM Control RNA seq


text: EBI-TEST

text: public

text: RNA sequencing HepG2NTCP cells infected with HBV 10dpi. Sp5-Cas9 treatment with Lamivudine

text: Hepatitis B virus

text: Hepatitis B virus

text: Protocol 2 +LAM Sp5 RNA seq


text: EBI-TEST

text: public

text: RNA sequencing HepG2NTCP cells infected with HBV 10dpi. Sp7- Cas9 treatment with Lamivudine

text: Hepatitis B virus

text: Hepatitis B virus

text: Protocol 2 +LAM Sp7 RNA seq


text: EBI-TEST

text: public

text: RNA sequencing HepG2NTCP cells infected with HBV 10dpi. Sp5Sp7-Cas9 treatment with Lamivudine

text: Hepatitis B virus

text: Hepatitis B virus

text: Protocol 2 +LAM Sp5+Sp7 RNA seq


text: EBI-TEST

text: public

text: DNA amplicons sequencing HepG2NTCP cells infected with HBV 7dpi. No Cas9 treatment.

text: Hepatitis B virus

text: Hepatitis B virus

text: Protocol 1 Control Amplicon


text: EBI-TEST

text: public

text: DNA amplicons sequencing HepG2NTCP cells infected with HBV 7dpi. Sp5-Cas9 treatment.

text: Hepatitis B virus

text: Hepatitis B virus

text: Protocol 1 Sp5 Amplicon


text: EBI-TEST

text: public

text: DNA amplicons sequencing HepG2NTCP cells infected with HBV 7dpi. Sp7- Cas9 treatment.

text: Hepatitis B virus

text: Hepatitis B virus

text: Protocol 1 Sp7 Amplicon


text: EBI-TEST

text: public

text: DNA amplicons sequencing HepG2NTCP cells infected with HBV 7dpi. Sp5Sp7-Cas9 treatment.

text: Hepatitis B virus

text: Hepatitis B virus

text: Protocol 1 Sp5+Sp7 Amplicon


text: EBI-TEST

text: public

text: DNA amplicons sequencing HepG2NTCP cells infected with HBV 10dpi. No Cas9 treatment.

text: Hepatitis B virus

text: Hepatitis B virus

text: Protocol 2 Control Amplicon


text: EBI-TEST

text: public

text: DNA amplicons sequencing HepG2NTCP cells infected with HBV 10dpi. Sp5-Cas9 treatment.

text: Hepatitis B virus

text: Hepatitis B virus

text: Protocol 2 Sp5 Amplicon


text: EBI-TEST

text: public

text: DNA amplicons sequencing HepG2NTCP cells infected with HBV 10dpi. Sp7- Cas9 treatment.

text: Hepatitis B virus

text: Hepatitis B virus

text: Protocol 2 Sp7 Amplicon


text: EBI-TEST

text: public

text: DNA amplicons sequencing HepG2NTCP cells infected with HBV 10dpi. Sp5Sp7-Cas9 treatment.

text: Hepatitis B virus

text: Hepatitis B virus

text: Protocol 2 Sp5+Sp7 Amplicon


text: EBI-TEST

text: public

text: DNA amplicons sequencing HepG2NTCP cells infected with HBV 10dpi. No Cas9 treatment with Lamivudine

text: Hepatitis B virus

text: Hepatitis B virus

text: Protocol 2 + LAM Control Amplicon


text: EBI-TEST

text: public

text: DNA amplicons sequencing HepG2NTCP cells infected with HBV 10dpi. Sp5-Cas9 treatment with Lamivudine

text: Hepatitis B virus

text: Hepatitis B virus

text: Protocol 2 +LAM Sp5 Amplicon


text: EBI-TEST ACCOUNT 123456

text: public

tag: Namespace:EBI-TEST ACCOUNT 123456

text: DNA amplicons sequencing HepG2NTCP cells infected with HBV 10dpi. Sp7- Cas9 treatment with Lamivudine

text: Hepatitis B virus

text: Hepatitis B virus

text: Protocol 2 +LAM Sp7Amplicon


text: EBI-TEST ACCOUNT 123456

text: public

text: DNA amplicons sequencing HepG2NTCP cells infected with HBV 10dpi. Sp5Sp7-Cas9 treatment with Lamivudine

text: Hepatitis B virus

text: Hepatitis B virus

text: Protocol 2 +LAM Sp5+Sp7 Amplicon


text: Huazhong Agricultural University

text: public

text: Schizothorax nukiangensis sampled in Lushui

text: Schizopyge nukiangensis

text: Schizopyge nukiangensis


text: Huazhong Agricultural University

text: public

text: Schizothorax nukiangensis sampled in Chawalong

text: Schizopyge nukiangensis

text: Schizopyge nukiangensis


text: Huazhong Agricultural University

text: public

text: Schizothorax nukiangensis sampled in Basu

text: Schizopyge nukiangensis

text: Schizopyge nukiangensis


text: Huazhong Agricultural University

text: public

text: Schizothorax nukiangensis sampled in Luolong

text: Schizopyge nukiangensis

text: Schizopyge nukiangensis


text: Huazhong Agricultural University

text: public

text: Schizothorax nukiangensis sampled in Bianba

text: Schizopyge nukiangensis

text: Schizopyge nukiangensis


text: Huazhong Agricultural University

text: public

text: Schizothorax nukiangensis sampled in Biru

text: Schizopyge nukiangensis

text: Schizopyge nukiangensis


text: public

tag: Namespace:WAGENINGEN UNIVERSITY, LABORATORY OF MICROBIOLOGY

text: spades

characteristic: assembly software

text: default

characteristic: binning parameters

text: Metawrap

characteristic: binning software

text: binned metagenome gb1_f_bin.1

text: Seawater

characteristic: environment (biome)

text: Seawater

characteristic: environment (feature)

text: Seawater

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Metagenome-assembled genome

text: Sponge metagenome

text: Seawater metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: project name

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq PE150


text: WAGENINGEN UNIVERSITY, LABORATORY OF MICROBIOLOGY

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: spades

text: default

text: Metawrap

text: binned metagenome Pf7_bin.66

text: Marine sponge

text: Seawater

text: Sponge tissue

characteristic: environment (material)

text: Mediterranean Sea

characteristic: geographic location (country and/or sea)

text: Metagenome-assembled genome

characteristic: investigation type

text: Sponge metagenome

text: sponge metagenome

text: uncultured bacterium

text: uncultured bacterium

text: Illumina HiSeq PE150

characteristic: sequencing method

characteristic: title


text: male

characteristic: ArrayExpress-SEX

text: Heligmosomoides polygyrus

characteristic: ArrayExpress-SPECIES

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Male

characteristic: GENDER

text: SC

characteristic: INSDC last update

text: public

text: Heligmosomoides polygyrus

characteristic: common name

text: Heligmosomoides polygyrus

characteristic: organism

text: Heligmosomoides polygyrus


text: Department of Zoology

characteristic: INSDC center name

text: public

characteristic: INSDC status

tag: Namespace:Department of Zoology

text: house mouse

characteristic: description

text: Mus musculus

text: Mus musculus