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characteristic: ENA-CHECKLIST

text: University of Helsinki

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urban biome (ENVO:01000249)

text: Stool sample from a  pregnant mother  # M1018

text: fecal material (ENVO:00002003)

text: Finland

text: feces (UBERON:0001988)

text: female

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: fecal environment (ENVO:01001029)

text: pregnant mother

text: human feces metagenome

characteristic: organism

text: human feces metagenome

text: MGI

text: adult stool sample


characteristic: ENA first public

text: University of Helsinki

characteristic: INSDC center name

text: public

text: urban biome (ENVO:01000249)

characteristic: broad-scale environmental context

characteristic: collection date

text: Stool sample from a  pregnant mother  # M1019

characteristic: description

text: fecal material (ENVO:00002003)

characteristic: environmental medium

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: feces (UBERON:0001988)

text: female

text: human-gut

text: metagenome

text: fecal environment (ENVO:01001029)

text: pregnant mother

text: human feces metagenome

text: human feces metagenome

text: MGI

text: adult stool sample


characteristic: ENA-CHECKLIST

text: University of Helsinki

text: public

characteristic: INSDC status

text: urban biome (ENVO:01000249)

text: Stool sample from a  pregnant mother  # M1021

text: fecal material (ENVO:00002003)

text: Finland

characteristic: host age

text: feces (UBERON:0001988)

characteristic: host body product

text: female

text: human-gut

text: metagenome

text: fecal environment (ENVO:01001029)

characteristic: local environmental context

text: pregnant mother

characteristic: miscellaneous parameter

text: human feces metagenome

characteristic: project name

text: human feces metagenome

text: MGI

characteristic: sequencing method

text: adult stool sample

characteristic: title


characteristic: ENA first public

text: University of Helsinki

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: urban biome (ENVO:01000249)

text: Stool sample from a  pregnant mother  # M1024

text: fecal material (ENVO:00002003)

text: Finland

text: feces (UBERON:0001988)

text: female

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: fecal environment (ENVO:01001029)

text: pregnant mother

text: human feces metagenome

characteristic: organism

text: human feces metagenome

text: MGI

text: adult stool sample


characteristic: ENA-CHECKLIST

text: University of Helsinki

text: public

characteristic: INSDC status

text: urban biome (ENVO:01000249)

characteristic: broad-scale environmental context

characteristic: collection date

text: Stool sample from a  pregnant mother  # M1025

characteristic: description

text: fecal material (ENVO:00002003)

characteristic: environmental medium

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: feces (UBERON:0001988)

text: female

text: human-gut

text: metagenome

text: fecal environment (ENVO:01001029)

text: pregnant mother

text: human feces metagenome

text: human feces metagenome

text: MGI

text: adult stool sample


characteristic: ENA first public

text: University of Helsinki

characteristic: INSDC center name

text: public

text: urban biome (ENVO:01000249)

text: Stool sample from a  pregnant mother  # M1026

text: fecal material (ENVO:00002003)

text: Finland

characteristic: host age

text: feces (UBERON:0001988)

characteristic: host body product

text: female

text: human-gut

text: metagenome

text: fecal environment (ENVO:01001029)

characteristic: local environmental context

text: pregnant mother

characteristic: miscellaneous parameter

text: human feces metagenome

characteristic: project name

text: human feces metagenome

text: MGI

characteristic: sequencing method

text: adult stool sample

characteristic: title


characteristic: ENA-CHECKLIST

text: University of Helsinki

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urban biome (ENVO:01000249)

text: Stool sample from a  pregnant mother  # M1027

text: fecal material (ENVO:00002003)

text: Finland

text: feces (UBERON:0001988)

text: female

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: fecal environment (ENVO:01001029)

text: pregnant mother

text: human feces metagenome

characteristic: organism

text: human feces metagenome

text: MGI

text: adult stool sample


characteristic: ENA first public

text: University of Helsinki

characteristic: INSDC center name

text: public

text: urban biome (ENVO:01000249)

characteristic: broad-scale environmental context

characteristic: collection date

text: Stool sample from a  pregnant mother  # M1031

characteristic: description

text: fecal material (ENVO:00002003)

characteristic: environmental medium

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: feces (UBERON:0001988)

text: female

text: human-gut

text: metagenome

text: fecal environment (ENVO:01001029)

text: pregnant mother

text: human feces metagenome

text: human feces metagenome

text: MGI

text: adult stool sample


characteristic: ENA-CHECKLIST

text: University of Helsinki

text: public

characteristic: INSDC status

text: urban biome (ENVO:01000249)

text: Stool sample from a  pregnant mother  # M150

text: fecal material (ENVO:00002003)

text: Finland

characteristic: host age

text: feces (UBERON:0001988)

characteristic: host body product

text: female

text: human-gut

text: metagenome

text: fecal environment (ENVO:01001029)

characteristic: local environmental context

text: pregnant mother

characteristic: miscellaneous parameter

text: human feces metagenome

characteristic: project name

text: human feces metagenome

text: MGI

characteristic: sequencing method

text: adult stool sample

characteristic: title


characteristic: ENA first public

text: University of Helsinki

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: urban biome (ENVO:01000249)

text: Stool sample from a  pregnant mother  # M1034

text: fecal material (ENVO:00002003)

text: Finland

text: feces (UBERON:0001988)

text: female

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: fecal environment (ENVO:01001029)

text: pregnant mother

text: human feces metagenome

characteristic: organism

text: human feces metagenome

text: MGI

text: adult stool sample


characteristic: ENA-CHECKLIST

text: University of Helsinki

text: public

characteristic: INSDC status

text: urban biome (ENVO:01000249)

characteristic: broad-scale environmental context

characteristic: collection date

text: Stool sample from a  pregnant mother  # M1036

characteristic: description

text: fecal material (ENVO:00002003)

characteristic: environmental medium

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: feces (UBERON:0001988)

text: female

text: human-gut

text: metagenome

text: fecal environment (ENVO:01001029)

text: pregnant mother

text: human feces metagenome

text: human feces metagenome

text: MGI

text: adult stool sample


characteristic: ENA first public

text: University of Helsinki

characteristic: INSDC center name

text: public

text: urban biome (ENVO:01000249)

text: Stool sample from a  pregnant mother  # M1037

text: fecal material (ENVO:00002003)

text: Finland

characteristic: host age

text: feces (UBERON:0001988)

characteristic: host body product

text: female

text: human-gut

text: metagenome

text: fecal environment (ENVO:01001029)

characteristic: local environmental context

text: pregnant mother

characteristic: miscellaneous parameter

text: human feces metagenome

characteristic: project name

text: human feces metagenome

text: MGI

characteristic: sequencing method

text: adult stool sample

characteristic: title


characteristic: ENA-CHECKLIST

text: University of Helsinki

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: urban biome (ENVO:01000249)

text: Stool sample from a  pregnant mother  # M1038

text: fecal material (ENVO:00002003)

text: Finland

text: feces (UBERON:0001988)

text: female

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: fecal environment (ENVO:01001029)

text: pregnant mother

text: human feces metagenome

characteristic: organism

text: human feces metagenome

text: MGI

text: adult stool sample


characteristic: ENA first public

text: University of Helsinki

characteristic: INSDC center name

text: public

text: urban biome (ENVO:01000249)

characteristic: broad-scale environmental context

characteristic: collection date

text: Stool sample from a  pregnant mother  # M1043

characteristic: description

text: fecal material (ENVO:00002003)

characteristic: environmental medium

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: feces (UBERON:0001988)

text: female

text: human-gut

text: metagenome

text: fecal environment (ENVO:01001029)

text: pregnant mother

text: human feces metagenome

text: human feces metagenome

text: MGI

text: adult stool sample


characteristic: ENA-CHECKLIST

text: University of Helsinki

text: public

characteristic: INSDC status

text: urban biome (ENVO:01000249)

text: Stool sample from a  pregnant mother  # M1045

text: fecal material (ENVO:00002003)

text: Finland

characteristic: host age

text: feces (UBERON:0001988)

characteristic: host body product

text: female

text: human-gut

text: metagenome

text: fecal environment (ENVO:01001029)

characteristic: local environmental context

text: pregnant mother

characteristic: miscellaneous parameter

text: human feces metagenome

characteristic: project name

text: human feces metagenome

text: MGI

characteristic: sequencing method

text: adult stool sample

characteristic: title


characteristic: ENA first public

text: University of Helsinki

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: urban biome (ENVO:01000249)

text: Stool sample from a  pregnant mother  # M1048

text: fecal material (ENVO:00002003)

text: Finland

text: feces (UBERON:0001988)

text: female

characteristic: host sex

characteristic: host subject id

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: fecal environment (ENVO:01001029)

text: pregnant mother

text: human feces metagenome

characteristic: organism

text: human feces metagenome

text: MGI

text: adult stool sample


characteristic: ENA-CHECKLIST

text: University of Helsinki

text: public

characteristic: INSDC status

text: urban biome (ENVO:01000249)

characteristic: broad-scale environmental context

characteristic: collection date

text: Stool sample from a  pregnant mother  # M1050

characteristic: description

text: fecal material (ENVO:00002003)

characteristic: environmental medium

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: feces (UBERON:0001988)

text: female

text: human-gut

text: metagenome

text: fecal environment (ENVO:01001029)

text: pregnant mother

text: human feces metagenome

text: human feces metagenome

text: MGI

text: adult stool sample


characteristic: ENA first public

text: University of Helsinki

characteristic: INSDC center name

text: public

text: urban biome (ENVO:01000249)

text: Stool sample from a  pregnant mother  # M1051

text: fecal material (ENVO:00002003)

text: Finland

characteristic: host age

text: feces (UBERON:0001988)

characteristic: host body product

text: female

text: human-gut

text: metagenome

text: fecal environment (ENVO:01001029)

characteristic: local environmental context

text: pregnant mother

characteristic: miscellaneous parameter

text: human feces metagenome

characteristic: project name

text: human feces metagenome

text: MGI

characteristic: sequencing method

text: adult stool sample

characteristic: title


characteristic: ENA-CHECKLIST

text: WASHINGTON UNIVERSITY SCHOOL OF MEDICINE

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Terai region

text: human

characteristic: common name

text: Non-Japanese encephalitis CSF

text: CSF

text: Nepal

text: Rupandehi district, Nepal

characteristic: geographic location (region and locality)

characteristic: host subject id

text: Nextera DNA library construction (Illumina)

characteristic: library construction method

characteristic: library reads sequenced

text: Fecal specimens were diluted in phosphate-buffered saline (PBS) at a 1:6 ratio and filtered through a 0.45-_m-pore-size membrane to enrich viruses

characteristic: library screening strategy

text: subtropical savanna biome

text: sequence independent DNA and RNA amplification (SIA) was performed on the total nucleic acid with primers consisting of a base-balanced 16 nucleotide (nt) specific sequence upstream of a random 15-mer (15 Ns) for random priming Finkbeiner, S.R. et al. Metagenomic analysis of human diarrhea: viral detection and discovery. PLoS Pathog. 4, e1000011 (2008).

characteristic: nucleic acid amplification

text: COBAS Ampliprep instrument (Roche)

characteristic: nucleic acid extraction

text: Homo sapiens

characteristic: organism

text: Gemykibivirus detection in acute encephalitis patients from Nepal

text: 200 mg stool

unit: g

characteristic: sample volume or weight for DNA extraction

text: Homo sapiens

text: MiSeq 2 _ 250 paired-end

text: M817_I10288_37940_Manandhar_N0000051_2020_NEB_26_ATGAGCATCT_S3


characteristic: ENA first public

characteristic: INSDC center name

text: public

text: Terai region

characteristic: broad-scale environmental context

characteristic: collection date

text: human

text: Non-Japanese encephalitis CSF

characteristic: description

text: CSF

characteristic: environmental medium

text: Nepal

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Rupandehi district, Nepal

text: subtropical savanna biome

characteristic: local environmental context

text: COBAS Ampliprep instrument (Roche)

text: Homo sapiens

characteristic: project name

text: 200 mg stool

text: Homo sapiens

text: MiSeq 2 _ 250 paired-end

text: M842_I10637_37940_Manandhar_N0000051_2020_I10288_NEB26_ATGAGC_S2


characteristic: ENA-CHECKLIST

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Terai region

text: human

characteristic: common name

text: Non-Japanese encephalitis CSF

text: CSF

text: Nepal

text: Rupandehi district, Nepal

characteristic: geographic location (region and locality)

characteristic: host subject id

characteristic: library construction method

characteristic: library reads sequenced

text: subtropical savanna biome

text: COBAS Ampliprep instrument (Roche)

text: Homo sapiens

text: 200 mg stool

text: Homo sapiens

text: MiSeq 2 _ 250 paired-end

characteristic: sequencing method

text: M842_I10640_37940_Manandhar_N0000051_2020_NEB14_AGTTCC_S5

characteristic: title


characteristic: ENA first public

text: PNRI

characteristic: INSDC center name

text: public

characteristic: collection date

text: brewer's yeast

text: Low coverage WGS of CYClones segregants

characteristic: description

text: USA

text: Saccharomyces cerevisiae

characteristic: organism

text: Saccharomyces cerevisiae