status: PUBLIC

characteristic: External Id

text: Northeast Agricultural University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

tag: attribute

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: missing

text: missing

text: missing

text: China

text: missing

text: missing

text: missing

text: Lactobacillus juensis

characteristic: organism

text: missing

text: Lactobacillus sp. F690

characteristic: strain

text: Lactobacillus sp. F690

characteristic: title

text: type strain of Lactobacillus juensis

characteristic: type-material


text: Northeast Agricultural University

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: missing

text: missing

text: missing

text: China

text: missing

text: missing

text: missing

text: Lactobacillus juensis

text: missing

text: Lactobacillus sp. F697

text: Lactobacillus sp. F697


text: Northeast Agricultural University

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: missing

text: missing

text: missing

text: China

text: missing

text: missing

text: missing

text: Lactobacillus rizhaonensis

text: missing

text: Lactobacillus sp. F769-2

text: Lactobacillus sp. F769-2


text: Northeast Agricultural University

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: missing

text: missing

text: missing

text: China

text: missing

text: missing

text: missing

text: Lactobacillus rizhaonensis

text: missing

text: Lactobacillus sp. F790

text: Lactobacillus sp. F790

text: type strain of Lactobacillus rizhaonensis


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: NTNU University Museum

text: public

tag: Namespace:NTNU University Museum

characteristic: Submitter Id

text: freshwater lake biome

characteristic: broad-scale environmental context

characteristic: collection date

text: Littoral sediment sample

text: pebble sediment

characteristic: environmental medium

text: Yes

text: Norway

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: lake sediment

characteristic: local environmental context

text: freshwater sediment metagenome

text: fwd:CCAGCASCYGCGGTAATTCC rev:ACTTTCGTTCTTGATYRA

characteristic: pcr primers

text: freshwater sediment metagenome

text: 18S rRNA gene

characteristic: target gene

characteristic: target subfragment


characteristic: External Id

text: NTNU University Museum

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: freshwater lake biome

text: Control

characteristic: description

text: pebble sediment

text: Yes

text: Norway

text: lake sediment

text: freshwater sediment metagenome

characteristic: organism

text: freshwater sediment metagenome

text: 18S rRNA gene


soil env_microbes-1

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Cape Town

text: public

text: soil env_microbes-1

tag: Namespace:University of Cape Town

characteristic: Submitter Id

text: bulk soil1

text: metagenome

text: metagenome

text: BSA

characteristic: title


soil env_microbes-2

text: University of Cape Town

text: public

text: soil env_microbes-2

text: bulk soil2

text: metagenome

text: metagenome

text: BSB


soil env_microbes-3

text: University of Cape Town

text: public

text: soil env_microbes-3

text: bulk soil3

text: metagenome

text: metagenome

text: BSC


rhizo env_microbes-1

text: University of Cape Town

text: public

text: rhizo env_microbes-1

text: metagenome

text: metagenome


rhizo env_microbes-2

text: University of Cape Town

text: public

text: rhizo env_microbes-2

text: metagenome

text: metagenome


rhizo env_microbes-3

text: University of Cape Town

text: public

text: rhizo env_microbes-3

text: metagenome

text: metagenome


rhizo env_microbes-4

text: University of Cape Town

text: public

text: rhizo env_microbes-4

text: metagenome

text: metagenome


rhizo env_microbes-5

text: University of Cape Town

text: public

text: rhizo env_microbes-5

text: metagenome

text: metagenome


root metagenome-1

text: University of Cape Town

text: public

text: root metagenome-1

text: Myrothamnus flabellifolia root1

text: metagenome

text: metagenome


root metagenome-2

text: University of Cape Town

text: public

text: root metagenome-2

text: Myrothamnus flabellifolia root2

text: metagenome

text: metagenome


root metagenome-3

text: University of Cape Town

text: public

text: root metagenome-3

text: Myrothamnus flabellifolia root3

text: metagenome

text: metagenome


root metagenome-4

text: University of Cape Town

text: public

text: root metagenome-4

text: Myrothamnus flabellifolia root4

text: metagenome

text: metagenome


root metagenome-5

text: University of Cape Town

text: public

text: root metagenome-5

text: Myrothamnus flabellifolia root5

text: metagenome

text: metagenome


text: INRAE

text: public

text: sessile oak

characteristic: common name

text: Whole-genome re-sequencing

text: France

characteristic: geographic location (country and/or sea)

text: Sillegny

characteristic: geographic location (region and locality)

text: Quercus petraea

text: Lappwald

characteristic: provenance

text: Quercus petraea

text: leaf

text: Quercus petraea-GWAS


text: INRAE

text: public

text: sessile oak

text: Whole-genome re-sequencing

text: France

text: Sillegny

text: Quercus petraea

text: Quercus petraea

text: leaf

text: Quercus petraea-GWAS


text: INRAE

text: public

text: sessile oak

text: Whole-genome re-sequencing

text: France

text: Sillegny

text: Quercus petraea

text: Göhrde

text: Quercus petraea

text: leaf

text: Quercus petraea-GWAS


text: INRAE

text: public

text: sessile oak

text: Whole-genome re-sequencing

text: France

text: Sillegny

text: Quercus petraea

text: Bézanges

text: Quercus petraea

text: leaf

text: Quercus petraea-GWAS


text: INRAE

text: public

text: sessile oak

text: Whole-genome re-sequencing

text: France

text: Sillegny

text: Quercus petraea

text: Grésigne

text: Quercus petraea

text: leaf

text: Quercus petraea-GWAS


text: INRAE

text: public

text: sessile oak

text: Whole-genome re-sequencing

text: France

text: Sillegny

text: Quercus petraea

text: Tronçais

text: Quercus petraea

text: leaf

text: Quercus petraea-GWAS


text: INRAE

text: public

text: sessile oak

text: Whole-genome re-sequencing

text: France

text: Sillegny

text: Quercus petraea

text: Longchamp

text: Quercus petraea

text: leaf

text: Quercus petraea-GWAS


text: INRAE

text: public

text: sessile oak

text: Whole-genome re-sequencing

text: France

text: Sillegny

text: Quercus petraea

text: Vachères

text: Quercus petraea

text: leaf

text: Quercus petraea-GWAS


text: INRAE

text: public

text: sessile oak

text: Whole-genome re-sequencing

text: France

text: Sillegny

text: Quercus petraea

text: Bercé

text: Quercus petraea

text: leaf

text: Quercus petraea-GWAS


text: HOSPITAL UNIVERSITARIO 12 DE OCTUBRE

text: public

tag: Namespace:HOSPITAL UNIVERSITARIO 12 DE OCTUBRE

characteristic: collection date

text: BIOPSY

text: Spain

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: klebsiella pneumoniae

characteristic: isolate

text: HUMAN

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

characteristic: strain

text: BIOPSY


characteristic: External Id

text: HOSPITAL UNIVERSITARIO 12 DE OCTUBRE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: RECTAL SWAB

text: Spain

text: diseased

text: Homo sapiens

text: klebsiella pneumoniae

text: HUMAN

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: RECTAL SWAB


characteristic: ENA first public

text: HOSPITAL UNIVERSITARIO 12 DE OCTUBRE

text: public

characteristic: SRA accession

text: WOUND SWAB

characteristic: description

text: Spain

text: diseased

text: Homo sapiens

text: klebsiella pneumoniae

text: HUMAN

text: Klebsiella pneumoniae

characteristic: organism

text: Klebsiella pneumoniae

text: WOUND SWAB


characteristic: ENA-CHECKLIST

text: HOSPITAL UNIVERSITARIO 12 DE OCTUBRE

text: public

characteristic: Submitter Id

text: URINE

text: Spain

text: diseased

text: Homo sapiens

text: klebsiella pneumoniae

text: HUMAN

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: URINE

characteristic: title


text: HOSPITAL UNIVERSITARIO 12 DE OCTUBRE

text: public

text: SPUTUM

text: Spain

characteristic: geographic location (country and/or sea)

text: diseased

text: Homo sapiens

text: klebsiella pneumoniae

text: HUMAN

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: SPUTUM


characteristic: DNAconcentration

text: m

characteristic: Gender

text: University of Lubeck

text: public

text: AD

characteristic: Skin

text: Feces

characteristic: Source

text: INITIAL

characteristic: Status

tag: Namespace:University of Lubeck

characteristic: Time

text: human

characteristic: common name

text: microbiome

characteristic: environmental package

text: FALSE

text: Homo sapiens

text: Homo sapiens

text: MiSeq

characteristic: sequencing method


characteristic: ENA first public

characteristic: External Id

text: f

text: University of Lubeck

characteristic: INSDC center name

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text: public

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text: INITIAL

text: human

text: microbiome

text: FALSE

text: Homo sapiens

text: Homo sapiens

text: MiSeq


characteristic: ENA-CHECKLIST

text: w

text: University of Lubeck

text: public

characteristic: SRA accession

text: AD

text: Feces

text: INITIAL

characteristic: Submitter Id

text: human

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text: FALSE

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text: Homo sapiens

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characteristic: DNAconcentration

text: m

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text: University of Lubeck

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characteristic: Skin

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text: human

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characteristic: title


text: f

text: University of Lubeck

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characteristic: Source

characteristic: Status

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text: human

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text: microbiome

text: FALSE

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text: MiSeq


characteristic: ENA first public

characteristic: External Id

text: m

text: University of Lubeck

text: public

text: keratosis pilaris

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text: FALSE

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text: MiSeq

characteristic: sequencing method


characteristic: ENA-CHECKLIST

text: w

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text: public

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text: human

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text: FALSE

text: Homo sapiens

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text: MiSeq


text: m

text: University of Lubeck

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characteristic: SRA accession

text: keratosis pilaris

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text: INITIAL

characteristic: Submitter Id

text: human

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text: FALSE

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characteristic: organism

text: Homo sapiens

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characteristic: DNAconcentration

text: University of Lubeck

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text: human

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characteristic: title


text: m

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text: University of Lubeck

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text: Elbow

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text: L

text: Skin

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text: INITIAL

characteristic: Status

text: human

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text: FALSE

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text: Homo sapiens

text: MiSeq


characteristic: ENA first public

characteristic: External Id

text: m

text: University of Lubeck

text: public

text: Forearm

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text: NL

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text: INITIAL

characteristic: Time

text: human

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text: microbiome

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text: FALSE

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characteristic: ENA-CHECKLIST

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text: public

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characteristic: DNAconcentration

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text: human

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text: f

characteristic: Gender

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text: human

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characteristic: title


characteristic: ENA first public

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text: f

text: University of Lubeck

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text: human

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text: microbiome

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characteristic: ENA-CHECKLIST

text: m

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characteristic: DNAconcentration

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text: w

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text: University of Lubeck

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text: human

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characteristic: ENA first public

characteristic: External Id

text: w

text: University of Lubeck

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text: human

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text: FALSE

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characteristic: title


characteristic: ENA-CHECKLIST

text: w

text: University of Lubeck

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text: public

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characteristic: common name

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characteristic: DNAconcentration

text: m

text: University of Lubeck

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characteristic: SRA accession

text: AD

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text: human

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text: TRUE

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text: m

characteristic: Gender

text: University of Lubeck

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characteristic: Site

text: keratosis pilaris

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characteristic: sequencing method


characteristic: ENA first public

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text: m

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characteristic: Status

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text: human

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text: FALSE

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text: Homo sapiens

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characteristic: ENA-CHECKLIST

text: m

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characteristic: INSDC center name

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text: public

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text: keratosis pilaris

text: Air

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characteristic: title


characteristic: DNAconcentration

text: f

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text: human

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text: f

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characteristic: ENA first public

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text: f

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characteristic: Status

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text: human

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characteristic: sequencing method


characteristic: ENA-CHECKLIST

text: m

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characteristic: DNAconcentration

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characteristic: SRA accession

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characteristic: Submitter Id

text: human

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characteristic: title


text: w

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text: L

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text: MiSeq


characteristic: ENA first public

characteristic: External Id

text: w

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characteristic: Status

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text: human

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characteristic: ENA-CHECKLIST

text: w

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characteristic: sequencing method


characteristic: DNAconcentration

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characteristic: SRA accession

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characteristic: Submitter Id

text: human

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text: m

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text: Forearm

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text: human

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characteristic: title


characteristic: ENA first public

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text: m

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characteristic: Time

text: human

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text: microbiome

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text: MiSeq


characteristic: ENA-CHECKLIST

text: f

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characteristic: DNAconcentration

text: f

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text: Forearm

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characteristic: Submitter Id

text: human

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text: MiSeq

characteristic: sequencing method


text: f

characteristic: Gender

text: University of Lubeck

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characteristic: Skin

text: Air

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text: human

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characteristic: organism

text: Homo sapiens

text: MiSeq


characteristic: ENA first public

characteristic: External Id

text: m

text: University of Lubeck

text: public

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text: keratosis pilaris

text: L

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text: human

text: microbiome

text: FALSE

text: Homo sapiens

text: Homo sapiens

text: MiSeq

characteristic: title


characteristic: ENA-CHECKLIST

text: m

text: University of Lubeck

characteristic: INSDC center name

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text: public

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text: keratosis pilaris

text: NL

text: Skin

characteristic: Time

text: human

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text: FALSE

text: Homo sapiens

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text: MiSeq


characteristic: DNAconcentration

text: m

text: University of Lubeck

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characteristic: INSDC status

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characteristic: Submitter Id

text: human

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characteristic: environmental package

text: TRUE

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text: Homo sapiens

text: MiSeq


text: Sorbonne University

text: public

tag: Namespace:Sorbonne University

characteristic: collection date

text: tropical clawed frog

characteristic: common name

text: MOct

text: France

characteristic: geographic location (country and/or sea)

text: Xenopus tropicalis

text: Xenopus tropicalis


characteristic: ENA first public

characteristic: External Id

text: Sorbonne University

text: public

text: tropical clawed frog

text: France

text: Xenopus tropicalis

characteristic: organism

text: Xenopus tropicalis


text: public

text: Newberry_1_1536_209_AGAACTCTAA_GTTCTA_S575

tag: Namespace:Washington University School of Medicine

text: house mouse

text: 528DRE MyD88 colon content Ln D3

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing

characteristic: title


characteristic: ENA-CHECKLIST

text: Washington University School of Medicine

text: public

text: Newberry_2_1538_209_GACCGAGTCA_GTTCTA_S576

text: house mouse

text: 581LE MyD88 colon content Ln D3

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


characteristic: INSDC center name

text: public

text: Newberry_3_1537_209_CACGGGCATA_GTTCTA_S577

text: house mouse

text: 583BE MyD88 colon content Ob D3

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


characteristic: INSDC last update

text: public

text: Newberry_5_1539_209_GTGGACCGCA_GTTCTA_S578

text: house mouse

text: 1_BL6 colon content Ob D3

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_6_1540_209_CAACCAGCGA_GTTCTA_S579

text: house mouse

text: 2_BL6 colon content Ob D3

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_7_1541_209_GCAGCATGGA_GTTCTA_S580

text: house mouse

text: 3_BL6 colon content Ob D3

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_8_1542_209_TGAACAGTAA_GTTCTA_S581

text: house mouse

text: 4_BL6 colon content Ln D3

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_9_1543_209_GCGACCGTTA_GTTCTA_S582

text: house mouse

text: 5_BL6 colon content Ln D3

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_10_1544_209_CCTTTGACGA_GTTCTA_S583

text: house mouse

text: 6_BL6 colon content Ln D3

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_14_1545_209_ACAGCTCCGA_GTTCTA_S584

text: house mouse

text: BL6 RE colon content Ob D3

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_23_1546_209_TTAGAAGGAA_GTTCTA_S585

text: house mouse

text: BL6NE colon content Ob D3

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_24_1547_209_ATCGCCGGGA_GTTCTA_S586

text: house mouse

text: 3BE colon content Control

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_25_1548_209_TGATTATCCA_GTTCTA_S587

text: house mouse

text: 3LE colon content Control

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_26_1549_209_GCTCAACCGA_GTTCTA_S588

text: house mouse

text: 3DRE colon content Ob D2

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_27_1550_209_GAACACCCTA_GTTCTA_S589

text: house mouse

text: 898DRE colon content Ob D2

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_28_1551_209_GTCACCTCGA_GTTCTA_S590

text: house mouse

text: 3RE (BE) colon content Ob D2

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_29_1552_209_GCGTGACGTA_GTTCTA_S591

text: house mouse

text: 900 NE colon content Ob D2

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: Washington University School of Medicine

text: public

text: Newberry_30_1553_209_TGATTGGACA_GTTCTA_S592

text: house mouse

text: 893 LE colon content Ob D2

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_31_1554_209_GCCGGTGAGA_GTTCTA_S593

text: house mouse

text: 892 RE colon content Ob D2

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_32_1555_209_GACTGTGGAA_GTTCTA_S594

text: house mouse

text: 894 LE + DRE colon content Ln D1

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_34_6A1_209_CTAGAGCTAT_GTTCTA_S595

text: house mouse

text: 896LE colon content Ln D1

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_35_6B1_209_TCGTTGCTAT_GTTCTA_S596

text: house mouse

text: 898BE colon content Ln D1

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_36_6C1_209_GATCCTAGAT_GTTCTA_S597

text: house mouse

text: 3NE colon content Ln D1

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_37_6D1_209_CTAGACCAAT_GTTCTA_S598

text: house mouse

text: 5_7 colon content Control

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_38_6E1_209_TCGATCCTAT_GTTCTA_S599

text: house mouse

text: RE colon content Control

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_39_6F1_209_GAGATGACAT_GTTCTA_S600

text: house mouse

text: NE colon content Control

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_40_6G1_209_GATGTCCAAT_GTTCTA_S601

text: house mouse

text: 5_1 colon content Ob D2

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_41_6H1_209_TATAGCCGAT_GTTCTA_S602

text: house mouse

text: 5_2 colon content Ob D2

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_42_6A2_209_CTGTGTGAAT_GTTCTA_S603

text: house mouse

text: 5_3 colon content Ob D2

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_43_6B2_209_CTTGACGAAT_GTTCTA_S604

text: house mouse

text: 5_4 colon content Ln D2

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_44_6C2_209_CACATCAGAT_GTTCTA_S605

text: house mouse

text: 5_5 colon content Ln D2

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_45_6A4_209_CTAGTCCTAT_GTTCTA_S606

text: house mouse

text: 5_6 colon content Ln D2

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_56_6E4_210_TGAGACTCAT_TTACGA_S614

text: human

text: Ln D2 Fecal samples Ln D2

text: USA

text: Homo sapiens

text: Homo sapiens

text: Fecal samples

text: 16S rRNA Sequencing


text: Washington University School of Medicine

text: public

text: Newberry_57_6D2_209_TGACGACTAT_GTTCTA_S615

text: house mouse

text: 16 RE colon content Control

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_58_6F2_209_TGCTACGAAT_GTTCTA_S616

text: house mouse

text: 16 DLE colon content Control

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_59_6G2_209_TGCTCTTGAT_GTTCTA_S617

text: house mouse

text: 16 NE colon content Control

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_60_6H2_209_TCCAGTAGAT_GTTCTA_S618

text: house mouse

text: 16 BE colon content Control

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_61_6B3_209_GCATCGTAAT_GTTCTA_S619

text: house mouse

text: 16 LE colon content Control

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_62_6C3_209_GTGTTCAGAT_GTTCTA_S620

text: house mouse

text: 15 LE colon content Ob D5

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_63_6D3_209_TGCTAGCAAT_GTTCTA_S621

text: house mouse

text: 15 RE colon content Ob D5

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_64_6E3_209_GTCTGAGTAT_GTTCTA_S622

text: house mouse

text: 15 DLE colon content Ob D5

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_65_6G3_209_CTGTGAGTAT_GTTCTA_S623

text: house mouse

text: 15 BE colon content Ob D5

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_66_6H3_209_CATCTGCTAT_GTTCTA_S624

text: house mouse

text: 15 NE colon content Ob D5

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_74_1543_210_GCGACCGTTA_TTACGA_S632

text: house mouse

text: 1 RE colon content Control

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_75_1544_210_CCTTTGACGA_TTACGA_S633

text: house mouse

text: 1 LE colon content Ob D1

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_76_1545_210_ACAGCTCCGA_TTACGA_S634

text: house mouse

text: 1 BE colon content Ob D1

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_77_1546_210_TTAGAAGGAA_TTACGA_S635

text: house mouse

text: 2 DRE colon content Ln D1

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_78_1547_210_ATCGCCGGGA_TTACGA_S636

text: house mouse

text: 2 NE colon content Ln D1

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_79_1548_210_TGATTATCCA_TTACGA_S637

text: house mouse

text: 1 DRE colon content Ob D1

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: Washington University School of Medicine

text: public

text: Newberry_80_1549_210_GCTCAACCGA_TTACGA_S638

text: house mouse

text: 1 NE colon content Ob D1

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_81_1550_210_GAACACCCTA_TTACGA_S639

text: house mouse

text: 2 RE colon content Ln D1

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_82_1551_210_GTCACCTCGA_TTACGA_S640

text: house mouse

text: 2 LE colon content Ln D1

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_83_1552_210_GCGTGACGTA_TTACGA_S641

text: house mouse

text: 2 BE colon content Control

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_88_6C4_210_CTACAGGTAT_TTACGA_S645

text: human

text: Ob D1 Fecal samples Ob D1

text: USA

text: Homo sapiens

text: Homo sapiens

text: Fecal samples

text: 16S rRNA Sequencing


text: public

text: Newberry_102_6E4_209_TGAGACTCAT_GTTCTA_S657

text: house mouse

text: 42 LE colon content Control

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_103_6F4_209_GAGTACAGAT_GTTCTA_S658

text: house mouse

text: 41 BE colon content Ob D1

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_104_6G4_209_GATGAGCAAT_GTTCTA_S659

text: house mouse

text: 41 RE colon content Ob D1

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_105_6H4_209_GTCAGTCAAT_GTTCTA_S660

text: house mouse

text: 43 BE colon content Ln D1

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_106_6A5_209_GAAGCTAGAT_GTTCTA_S661

text: house mouse

text: 43 NE colon content Ln D1

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_107_6B5_209_GACTACTGAT_GTTCTA_S662

text: house mouse

text: 42 RE colon content Control

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_108_6C5_209_TCGTTCGTAT_GTTCTA_S663

text: house mouse

text: 42 BE colon content Control

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_109_6D5_209_ACGTCATGAT_GTTCTA_S664

text: house mouse

text: 43 RE colon content Ln D1

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_110_6E5_209_CTCATCACAT_GTTCTA_S665

text: house mouse

text: 43 LE colon content Ln D1

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_111_6F5_209_AGACTCTGAT_GTTCTA_S666

text: house mouse

text: 41 LE colon content Ob D1

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_112_6G5_209_ATATCGCGAT_GTTCTA_S667

text: house mouse

text: 41 NE colon content Ob D1

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: Washington University School of Medicine

text: public

text: Newberry_123_6F8_209_CACTTCTGAT_GTTCTA_S678

text: house mouse

text: 2 NE colon content

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_124_6H8_209_GTGTAGAGAT_GTTCTA_S679

text: house mouse

text: 1 RE colon content Ln D4

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_1215_6A9_209_TCCTCATGAT_GTTCTA_S680

text: house mouse

text: 2 LE_DRE colon content Ln D4

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_126_6B9_209_TCACTCACAT_GTTCTA_S681

text: house mouse

text: 2 LE colon content Ob D4

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_127_6C9_209_CTCACAGAAT_GTTCTA_S682

text: house mouse

text: 2 DRE colon content Ob D4

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_128_6D9_209_CACAGACTAT_GTTCTA_S683

text: house mouse

text: 1 DRE colon content

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_129_6F9_209_GACTAGTCAT_GTTCTA_S684

text: house mouse

text: 1 LE colon content Ln D4

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_130_6A10_209_GTTGACGTAT_GTTCTA_S685

text: house mouse

text: 1 NE colon content Ln D4

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_131_6B10_209_CATGACGTAT_GTTCTA_S686

text: house mouse

text: 1 LE_ DRE colon content Ob D4

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_132_6C10_209_ACTGCAGTAT_GTTCTA_S687

text: house mouse

text: 2 BE colon content Ob D4

text: USA

text: Mus musculus

text: Mus musculus

text: colon content

text: 16S rRNA Sequencing


text: public

text: Newberry_146_6F4_210_GAGTACAGAT_TTACGA_S692

text: human

text: Ln D1 Fecal samples

text: USA

text: Homo sapiens

text: Homo sapiens

text: Fecal samples

text: 16S rRNA Sequencing


text: public

text: Newberry_147_6G4_210_GATGAGCAAT_TTACGA_S693

text: human

text: Ob D2 Fecal samples

text: USA

text: Homo sapiens

text: Homo sapiens

text: Fecal samples

text: 16S rRNA Sequencing


text: public

text: Newberry_148_6H4_210_GTCAGTCAAT_TTACGA_S694

text: human

text: Ln D4 Fecal samples

text: USA

text: Homo sapiens

text: Homo sapiens

text: Fecal samples

text: 16S rRNA Sequencing


text: public

text: Newberry_149_6A5_210_GAAGCTAGAT_TTACGA_S695

text: human

text: Ln D3 Fecal samples

text: USA

text: Homo sapiens

text: Homo sapiens

text: Fecal samples

text: 16S rRNA Sequencing


text: public

text: Newberry_150_6B5_210_GACTACTGAT_TTACGA_S696

text: human

text: Ob D3 Fecal samples

text: USA

text: Homo sapiens

text: Homo sapiens

text: Fecal samples

text: 16S rRNA Sequencing


text: public

text: Newberry_151_6C5_210_TCGTTCGTAT_TTACGA_S697

text: human

text: Ob D4 Fecal samples

text: USA

text: Homo sapiens

text: Homo sapiens

text: Fecal samples

text: 16S rRNA Sequencing


text: Washington University School of Medicine

text: public

text: Newberry_152_6D5_210_ACGTCATGAT_TTACGA_S698

text: human

text: Ob D5 Fecal samples

text: USA

text: Homo sapiens

text: Homo sapiens

text: Fecal samples

text: 16S rRNA Sequencing


text: public

tag: Namespace:Institut de recherche experimentale et clinique - IREC

text: Clinical isolate CTMA_1913

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1913


text: Institut de recherche experimentale et clinique - IREC

text: public

text: Clinical isolate CTMA_1914

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1914


text: public

text: Clinical isolate CTMA_1915

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1915


text: public

text: Clinical isolate CTMA_1916

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1916


text: STELLENBOSCH UNIVERSITY

text: public

tag: Namespace:STELLENBOSCH UNIVERSITY

text: Mycobacterium tuberculosis culture from phenotypically resistant Mtb isolates

text: South Africa

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: Culture

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis


E-MTAB-13418:Sample 1

text: public

characteristic: INSDC status

text: E-MTAB-13418:Sample 1

tag: Namespace:The University of New England and CSIRO Agriculture and Food

unit: month

characteristic: age

text: Black Baldy

characteristic: breed

text: ArrayExpress

characteristic: broker name

text: mononuclear cell

text: neutered (steer)

characteristic: clinical information

text: not collected

text: cattle

text: Protocols: Blood samples were collected via jugular venepuncture into sterile EDTA vacutainers. Peripheral blood mononuclear cells were isolated using a gradient and resuspended in culture media before treatment. Bovine PBMCs were cultured in complete media (high glucose DMEM, 10% foetal calf serum, 1% Penicillin/Streptomycin, 1% glutamax; Thermofisher Scientific, USA) and seeded at a concentration of 10^6 cells/mL per well. Plates/samples were incubated in an incubator at 37 degrees Celcius, 5% CO2:95% air atmosphere (InCU Safe Sanyo CO2 Incubator, USA). PBMCs in samples 1-12 were treated with media only (NT), 2ug, 5ug, 12.5ug or 31.25ug Amplimune (stimulant). RNA was extracted at 0 h, 6 h or 24 h. PBMCs in samples 13-36 were treated with media only (NT) or 31.25ug Amplimune. RNA was extracted at 0 h, 6 h or 24 h. Total RNA was stored in RNAse free water in RNAse free snap-lock tubes and sent to the AGRF (Melbourne Australia) at a concentration of 1200ng. Cells were washed twice and lysed using a lysis buffer from the Isolate II RNA Mini Kit (BioLine, Meridian LifeScience Inc, USA). The lysed cells and lysis buffer were then transferred to the shredder column supplied by the kit and the protocol of the kit was used to extract RNA as per manufacturer's instructions. Ribosomal RNA depletion was done using the Ribo-Zero Gold rRNA depletion method and 36 libraries were prepared from rRNA depleted RNA.

characteristic: description

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not collected

text: A

characteristic: individual

text: not applicable

text: Bos taurus

text: Bos taurus

text: blood

characteristic: organism part

text: Bos taurus

text: male

characteristic: sex

text: Amplimune

characteristic: stimulus

text: Sample 1


E-MTAB-13418:Sample 13

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: The University of New England and CSIRO Agriculture and Food

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: E-MTAB-13418:Sample 13

characteristic: Submitter Id

text: Black Baldy

text: ArrayExpress

text: mononuclear cell

text: neutered (steer)

text: not collected

characteristic: collection date

text: cattle

characteristic: common name

text: adult

text: normal

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: B

text: not applicable

text: Bos taurus

characteristic: organism

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 13

characteristic: title


E-MTAB-13418:Sample 14

text: public

characteristic: INSDC status

text: E-MTAB-13418:Sample 14

characteristic: age

text: Black Baldy

characteristic: breed

text: ArrayExpress

characteristic: broker name

text: mononuclear cell

text: neutered (steer)

characteristic: clinical information

text: not collected

text: cattle

characteristic: description

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not collected

text: C

text: not applicable

characteristic: isolate

text: Bos taurus

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 14


E-MTAB-13418:Sample 15

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: E-MTAB-13418:Sample 15

text: Black Baldy

text: ArrayExpress

text: mononuclear cell

text: neutered (steer)

text: not collected

text: cattle

text: adult

text: normal

text: wild type genotype

text: not collected

text: D

characteristic: individual

text: not applicable

text: Bos taurus

text: Bos taurus

text: blood

characteristic: organism part

text: Bos taurus

text: male

characteristic: sex

text: Amplimune

characteristic: stimulus

text: Sample 15


E-MTAB-13418:Sample 16

text: public

characteristic: INSDC status

text: E-MTAB-13418:Sample 16

characteristic: Submitter Id

characteristic: age

text: Black Baldy

characteristic: breed

text: ArrayExpress

characteristic: broker name

text: mononuclear cell

text: neutered (steer)

text: not collected

characteristic: collection date

text: cattle

characteristic: common name

text: adult

text: normal

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: E

text: not applicable

text: Bos taurus

characteristic: organism

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 16

characteristic: title


E-MTAB-13418:Sample 17

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-13418:Sample 17

text: Black Baldy

text: ArrayExpress

text: mononuclear cell

text: neutered (steer)

characteristic: clinical information

text: not collected

text: cattle

characteristic: description

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not collected

text: F

text: not applicable

characteristic: isolate

text: Bos taurus

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 17


E-MTAB-13418:Sample 18

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13418:Sample 18

characteristic: Submitter Id

characteristic: age

text: Black Baldy

characteristic: breed

text: ArrayExpress

text: mononuclear cell

text: neutered (steer)

text: not collected

text: cattle

text: adult

text: normal

text: wild type genotype

text: not collected

text: F

characteristic: individual

text: not applicable

text: Bos taurus

text: Bos taurus

text: blood

characteristic: organism part

text: Bos taurus

text: male

characteristic: sex

text: Amplimune

characteristic: stimulus

text: Sample 18


E-MTAB-13418:Sample 19

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-13418:Sample 19

text: Black Baldy

text: ArrayExpress

characteristic: broker name

text: mononuclear cell

text: neutered (steer)

text: not collected

characteristic: collection date

text: cattle

characteristic: common name

text: adult

text: normal

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: B

text: not applicable

text: Bos taurus

characteristic: organism

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 19

characteristic: title


E-MTAB-13418:Sample 2

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13418:Sample 2

characteristic: Submitter Id

text: Black Baldy

text: ArrayExpress

text: mononuclear cell

text: neutered (steer)

characteristic: clinical information

text: not collected

text: cattle

characteristic: description

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not collected

text: A

text: not applicable

characteristic: isolate

text: Bos taurus

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 2


E-MTAB-13418:Sample 20

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-13418:Sample 20

characteristic: age

text: Black Baldy

characteristic: breed

text: ArrayExpress

text: mononuclear cell

text: neutered (steer)

text: not collected

text: cattle

text: adult

text: normal

text: wild type genotype

text: not collected

text: C

characteristic: individual

text: not applicable

text: Bos taurus

text: Bos taurus

text: blood

characteristic: organism part

text: Bos taurus

text: male

characteristic: sex

text: Amplimune

characteristic: stimulus

text: Sample 20


E-MTAB-13418:Sample 21

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13418:Sample 21

characteristic: Submitter Id

text: Black Baldy

text: ArrayExpress

characteristic: broker name

text: mononuclear cell

text: neutered (steer)

text: not collected

characteristic: collection date

text: cattle

characteristic: common name

text: adult

text: normal

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: D

text: not applicable

text: Bos taurus

characteristic: organism

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 21

characteristic: title


E-MTAB-13418:Sample 22

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-13418:Sample 22

text: Black Baldy

text: ArrayExpress

text: mononuclear cell

text: neutered (steer)

characteristic: clinical information

text: not collected

text: cattle

characteristic: description

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not collected

text: E

text: not applicable

characteristic: isolate

text: Bos taurus

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 22


E-MTAB-13418:Sample 23

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13418:Sample 23

characteristic: Submitter Id

characteristic: age

text: Black Baldy

characteristic: breed

text: ArrayExpress

text: mononuclear cell

text: neutered (steer)

text: not collected

text: cattle

text: adult

text: normal

text: wild type genotype

text: not collected

text: B

characteristic: individual

text: not applicable

text: Bos taurus

text: Bos taurus

text: blood

characteristic: organism part

text: Bos taurus

text: male

characteristic: sex

text: Amplimune

characteristic: stimulus

text: Sample 23


E-MTAB-13418:Sample 24

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-13418:Sample 24

text: Black Baldy

text: ArrayExpress

characteristic: broker name

text: mononuclear cell

text: neutered (steer)

text: not collected

characteristic: collection date

text: cattle

characteristic: common name

text: adult

text: normal

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: C

text: not applicable

text: Bos taurus

characteristic: organism

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 24

characteristic: title


E-MTAB-13418:Sample 25

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13418:Sample 25

characteristic: Submitter Id

text: Black Baldy

text: ArrayExpress

text: mononuclear cell

text: neutered (steer)

characteristic: clinical information

text: not collected

text: cattle

characteristic: description

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not collected

text: D

text: not applicable

characteristic: isolate

text: Bos taurus

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 25


E-MTAB-13418:Sample 26

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-13418:Sample 26

characteristic: age

text: Black Baldy

characteristic: breed

text: ArrayExpress

text: mononuclear cell

text: neutered (steer)

text: not collected

text: cattle

text: adult

text: normal

text: wild type genotype

text: not collected

text: E

characteristic: individual

text: not applicable

text: Bos taurus

text: Bos taurus

text: blood

characteristic: organism part

text: Bos taurus

text: male

characteristic: sex

text: Amplimune

characteristic: stimulus

text: Sample 26


E-MTAB-13418:Sample 3

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13418:Sample 3

characteristic: Submitter Id

text: Black Baldy

text: ArrayExpress

characteristic: broker name

text: mononuclear cell

text: neutered (steer)

text: not collected

characteristic: collection date

text: cattle

characteristic: common name

text: adult

text: normal

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: A

text: not applicable

text: Bos taurus

characteristic: organism

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 3

characteristic: title


E-MTAB-13418:Sample 4

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-13418:Sample 4

text: Black Baldy

text: ArrayExpress

text: mononuclear cell

text: neutered (steer)

characteristic: clinical information

text: not collected

text: cattle

characteristic: description

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not collected

text: A

text: not applicable

characteristic: isolate

text: Bos taurus

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 4


E-MTAB-13418:Sample 5

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13418:Sample 5

characteristic: Submitter Id

characteristic: age

text: Black Baldy

characteristic: breed

text: ArrayExpress

text: mononuclear cell

text: neutered (steer)

text: not collected

text: cattle

text: adult

text: normal

text: wild type genotype

text: not collected

text: A

characteristic: individual

text: not applicable

text: Bos taurus

text: Bos taurus

text: blood

characteristic: organism part

text: Bos taurus

text: male

characteristic: sex

text: Amplimune

characteristic: stimulus

text: Sample 5


E-MTAB-13418:Sample 6

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-13418:Sample 6

text: Black Baldy

text: ArrayExpress

characteristic: broker name

text: mononuclear cell

text: neutered (steer)

text: not collected

characteristic: collection date

text: cattle

characteristic: common name

text: adult

text: normal

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: A

text: not applicable

text: Bos taurus

characteristic: organism

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 6

characteristic: title


E-MTAB-13418:Sample 7

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13418:Sample 7

characteristic: Submitter Id

text: Black Baldy

text: ArrayExpress

text: mononuclear cell

text: neutered (steer)

characteristic: clinical information

text: not collected

text: cattle

characteristic: description

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not collected

text: A

text: not applicable

characteristic: isolate

text: Bos taurus

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 7


E-MTAB-13418:Sample 10

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-13418:Sample 10

characteristic: age

text: Black Baldy

characteristic: breed

text: ArrayExpress

text: mononuclear cell

text: neutered (steer)

text: not collected

text: cattle

text: adult

text: normal

text: wild type genotype

text: not collected

text: A

characteristic: individual

text: not applicable

text: Bos taurus

text: Bos taurus

text: blood

characteristic: organism part

text: Bos taurus

text: male

characteristic: sex

text: Amplimune

characteristic: stimulus

text: Sample 10


E-MTAB-13418:Sample 11

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13418:Sample 11

characteristic: Submitter Id

text: Black Baldy

text: ArrayExpress

characteristic: broker name

text: mononuclear cell

text: neutered (steer)

text: not collected

characteristic: collection date

text: cattle

characteristic: common name

text: adult

text: normal

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: A

text: not applicable

text: Bos taurus

characteristic: organism

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 11

characteristic: title


E-MTAB-13418:Sample 12

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-13418:Sample 12

text: Black Baldy

text: ArrayExpress

text: mononuclear cell

text: neutered (steer)

characteristic: clinical information

text: not collected

text: cattle

characteristic: description

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not collected

text: A

text: not applicable

characteristic: isolate

text: Bos taurus

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 12


E-MTAB-13418:Sample 27

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13418:Sample 27

characteristic: Submitter Id

characteristic: age

text: Black Baldy

characteristic: breed

text: ArrayExpress

text: mononuclear cell

text: neutered (steer)

text: not collected

text: cattle

text: adult

text: normal

text: wild type genotype

text: not collected

text: B

characteristic: individual

text: not applicable

text: Bos taurus

text: Bos taurus

text: blood

characteristic: organism part

text: Bos taurus

text: male

characteristic: sex

text: Amplimune

characteristic: stimulus

text: Sample 27


E-MTAB-13418:Sample 28

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-13418:Sample 28

text: Black Baldy

text: ArrayExpress

characteristic: broker name

text: mononuclear cell

text: neutered (steer)

text: not collected

characteristic: collection date

text: cattle

characteristic: common name

text: adult

text: normal

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: C

text: not applicable

text: Bos taurus

characteristic: organism

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 28

characteristic: title


E-MTAB-13418:Sample 29

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13418:Sample 29

characteristic: Submitter Id

text: Black Baldy

text: ArrayExpress

text: mononuclear cell

text: neutered (steer)

characteristic: clinical information

text: not collected

text: cattle

characteristic: description

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not collected

text: D

text: not applicable

characteristic: isolate

text: Bos taurus

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 29


E-MTAB-13418:Sample 30

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-13418:Sample 30

characteristic: age

text: Black Baldy

characteristic: breed

text: ArrayExpress

text: mononuclear cell

text: neutered (steer)

text: not collected

text: cattle

text: adult

text: normal

text: wild type genotype

text: not collected

text: E

characteristic: individual

text: not applicable

text: Bos taurus

text: Bos taurus

text: blood

characteristic: organism part

text: Bos taurus

text: male

characteristic: sex

text: Amplimune

characteristic: stimulus

text: Sample 30


E-MTAB-13418:Sample 31

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13418:Sample 31

characteristic: Submitter Id

text: Black Baldy

text: ArrayExpress

characteristic: broker name

text: mononuclear cell

text: neutered (steer)

text: not collected

characteristic: collection date

text: cattle

characteristic: common name

text: adult

text: normal

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: F

text: not applicable

text: Bos taurus

characteristic: organism

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 31

characteristic: title


E-MTAB-13418:Sample 32

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-13418:Sample 32

text: Black Baldy

text: ArrayExpress

text: mononuclear cell

text: neutered (steer)

characteristic: clinical information

text: not collected

text: cattle

characteristic: description

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not collected

text: B

text: not applicable

characteristic: isolate

text: Bos taurus

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 32


E-MTAB-13418:Sample 33

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13418:Sample 33

characteristic: Submitter Id

characteristic: age

text: Black Baldy

characteristic: breed

text: ArrayExpress

text: mononuclear cell

text: neutered (steer)

text: not collected

text: cattle

text: adult

text: normal

text: wild type genotype

text: not collected

text: C

characteristic: individual

text: not applicable

text: Bos taurus

text: Bos taurus

text: blood

characteristic: organism part

text: Bos taurus

text: male

characteristic: sex

text: Amplimune

characteristic: stimulus

text: Sample 33


E-MTAB-13418:Sample 34

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-13418:Sample 34

text: Black Baldy

text: ArrayExpress

characteristic: broker name

text: mononuclear cell

text: neutered (steer)

text: not collected

characteristic: collection date

text: cattle

characteristic: common name

text: adult

text: normal

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: D

text: not applicable

text: Bos taurus

characteristic: organism

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 34

characteristic: title


E-MTAB-13418:Sample 35

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13418:Sample 35

characteristic: Submitter Id

text: Black Baldy

text: ArrayExpress

text: mononuclear cell

text: neutered (steer)

characteristic: clinical information

text: not collected

text: cattle

characteristic: description

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not collected

text: E

text: not applicable

characteristic: isolate

text: Bos taurus

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 35


E-MTAB-13418:Sample 36

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-13418:Sample 36

characteristic: age

text: Black Baldy

characteristic: breed

text: ArrayExpress

text: mononuclear cell

text: neutered (steer)

text: not collected

text: cattle

text: adult

text: normal

text: wild type genotype

text: not collected

text: F

characteristic: individual

text: not applicable

text: Bos taurus

text: Bos taurus

text: blood

characteristic: organism part

text: Bos taurus

text: male

characteristic: sex

text: Amplimune

characteristic: stimulus

text: Sample 36


E-MTAB-13418:Sample 8

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13418:Sample 8

characteristic: Submitter Id

text: Black Baldy

text: ArrayExpress

characteristic: broker name

text: mononuclear cell

text: neutered (steer)

text: not collected

characteristic: collection date

text: cattle

characteristic: common name

text: adult

text: normal

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: A

text: not applicable

text: Bos taurus

characteristic: organism

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 8

characteristic: title


E-MTAB-13418:Sample 9

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

text: public

text: E-MTAB-13418:Sample 9

text: Black Baldy

text: ArrayExpress

text: mononuclear cell

text: neutered (steer)

characteristic: clinical information

text: not collected

text: cattle

characteristic: description

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not collected

text: A

text: not applicable

characteristic: isolate

text: Bos taurus

text: Bos taurus

text: blood

text: Bos taurus

text: male

text: Amplimune

text: Sample 9


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Instituto de Investigacion Biosanitaria del Principado de Asturias (ISPA)

characteristic: Submitter Id

text: Glioblastoma Stem Cell

text: human

text: mock

characteristic: condition

text: U3117 cells subjected to vehicle treatment for 15 days. Replicate 1

text: Spain

text: Homo sapiens

text: Homo sapiens

text: Brain


text: Instituto de Investigacion Biosanitaria del Principado de Asturias (ISPA)

text: public

text: Glioblastoma Stem Cell

characteristic: collection date

text: human

characteristic: common name

text: mock

text: U3117 cells subjected to vehicle treatment for 15 days. Replicate 2

text: Spain

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Brain


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: public

text: Glioblastoma Stem Cell

text: human

text: Vitc

text: U3117 cells subjected to Ascorbic acid treatment for 15 days. Replicate 1

text: Spain

text: Homo sapiens

text: Homo sapiens

text: Brain

characteristic: title


characteristic: INSDC center name

text: public

text: Glioblastoma Stem Cell

text: human

text: VitC

text: U3117 cells subjected to Ascorbic acid treatment for 15 days. Replicate 2

characteristic: description

text: Spain

text: Homo sapiens

text: Homo sapiens

text: Brain


text: University of Helsinki

text: public

tag: Namespace:University of Helsinki

text: urban biome (ENVO:01000249)

characteristic: broad-scale environmental context

text: Stool sample Infant #I53 collected at 13 weeks of age

text: fecal material (ENVO:00002003)

characteristic: environmental medium

text: Finland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

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