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text: JJ-DHS13-24-9-m2-bin14 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium

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text: freshwater lake

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text: JJ-DHS1A4C2-339-2-m1-bin232 - Bacteria; Chlorobi; Chlorobia

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text: JJ-DHS1A4C2-339-4-mx-bin519 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium

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characteristic: environment (biome)

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text: JJ-GEL11-19-1-m1-bin234 - Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Archangiaceae; Archangium

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characteristic: environment (biome)

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text: fresh water

characteristic: environment (material)

text: Germany

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text: Freshwater lake

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text: JJ-GEL11-19-1-m2-bin22 - Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales

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text: JJ-GEL11-19-1-mx-bin521 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

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characteristic: environment (biome)

text: lake

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text: fresh water

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text: Freshwater lake

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text: MEGAHIT

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text: coverage and kmer

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text: JJ-GEL11-19-2-m1-bin235 - Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae

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text: JJ-GEL11-19-4-m1-bin236 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium

text: freshwater lake

characteristic: environment (biome)

text: lake

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text: fresh water

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text: Germany

characteristic: geographic location (latitude)

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text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

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characteristic: metagenomic source

text: Azorhizobium sp. AG788

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text: Biology Centre CAS

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text: MEGAHIT

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text: coverage and kmer

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text: JJ-GEL11-19-4-mx-bin522 - Bacteria; Candidatus Kapabacteria

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text: Candidatus Kapabacteria bacterium

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characteristic: binning parameters

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text: JJ-GEL11-19-6-mx-bin523 - Bacteria; Actinobacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Salinibacterium

text: freshwater lake

characteristic: environment (biome)

text: lake

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text: fresh water

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text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

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text: Salinibacterium xinjiangense

characteristic: project name

characteristic: sample derived from

text: Salinibacterium xinjiangense

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-GEL11-19-8-mx-bin524 - Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Germany

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Chitinophaga pinensis

characteristic: organism

text: Chitinophaga pinensis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-GEL11-19-9-m2-bin23 - Bacteria; Cyanobacteria; Synechococcales; Pseudanabaenaceae; Pseudanabaena

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Pseudanabaena sp. UWO311

characteristic: project name

characteristic: sample derived from

text: Pseudanabaena sp. UWO311

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-GEL9D5-184-1-m1-bin237 - Bacteria; Proteobacteria; Alphaproteobacteria

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Germany

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Rhizobium sp. Q54

characteristic: organism

text: Rhizobium sp. Q54

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-GEL9D5-184-1-m2-bin24 - Bacteria; Actinobacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Salinibacterium

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Salinibacterium xinjiangense

characteristic: project name

characteristic: sample derived from

text: Salinibacterium xinjiangense

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-GEL9D5-184-1-mx-bin525 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Germany

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Synechococcus sp. UW140

characteristic: organism

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: Biology Centre CAS

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-GR1L3-82-1-m1-bin238 - Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Archangiaceae; Archangium

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Archangium gephyra

characteristic: project name

characteristic: sample derived from

text: Archangium gephyra

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-GR1L3-82-1-m2-bin25 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Germany

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Synechococcus sp. UW140

characteristic: organism

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-GR1L3-82-2-mx-bin526 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Ramlibacter sp. 2FC

characteristic: project name

characteristic: sample derived from

text: Ramlibacter sp. 2FC

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-GR1L3-82-3-mx-bin527 - Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Germany

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Sphingobacterium thalpophilum

characteristic: organism

text: Sphingobacterium thalpophilum

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-GR1L3-82-5-m2-bin26 - Bacteria; Bacteroidetes

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Germany

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Chitinophaga pinensis

characteristic: project name

characteristic: sample derived from

text: Chitinophaga pinensis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-HEJT-55-1-m2-bin27 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax; Variovorax paradoxus

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Variovorax paradoxus

characteristic: organism

text: Variovorax paradoxus

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-HEJT-55-1-mx-bin528 - Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Brevundimonas vancanneytii

characteristic: project name

characteristic: sample derived from

text: Brevundimonas vancanneytii

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-HEJT-55-2-mx-bin529 - Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Zoogloeaceae; Thauera

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Thauera chlorobenzoica

characteristic: organism

text: Thauera chlorobenzoica

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-HEJT-55-3-m1-bin239 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Acidovorax caeni

characteristic: project name

characteristic: sample derived from

text: Acidovorax caeni

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-HEJT-55-4-m2-bin28 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Alsobacter

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Alsobacter soli

characteristic: organism

text: Alsobacter soli

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-HEJT-55-5-m1-bin240 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Synechococcus sp. UW140

characteristic: project name

characteristic: sample derived from

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-HEJT-55-5-mx-bin530 - Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Brevundimonas vancanneytii

characteristic: organism

text: Brevundimonas vancanneytii

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-HEJT-55-7-mx-bin531 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Sinorhizobium meliloti

characteristic: project name

characteristic: sample derived from

text: Sinorhizobium meliloti

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-HU231-55-1-m1-bin241 - Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Rhodanobacteraceae; Aquimonas

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Aquimonas voraii

characteristic: organism

text: Aquimonas voraii

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-HU231-55-2-m1-bin242 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Synechococcus sp. UW140

characteristic: project name

characteristic: sample derived from

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-HU231-55-3-m1-bin243 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Hydrogenophaga intermedia

characteristic: organism

text: Hydrogenophaga intermedia

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: Biology Centre CAS

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-HU233-56-1-m1-bin244 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Acidovorax caeni

characteristic: project name

characteristic: sample derived from

text: Acidovorax caeni

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-HU233-56-1-mx-bin532 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Synechococcus sp. UW140

characteristic: organism

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-HU235-57-2-m2-bin29 - Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Chitinophaga pinensis

characteristic: project name

characteristic: sample derived from

text: Chitinophaga pinensis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-HU235-57-2-mx-bin533 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Hydrogenophaga intermedia

characteristic: organism

text: Hydrogenophaga intermedia

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-HU235-57-4-m1-bin245 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Bordetella parapertussis

characteristic: project name

characteristic: sample derived from

text: Bordetella parapertussis

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-HU235-57-4-m2-bin30 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Synechococcus sp. UW140

characteristic: organism

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-JE126-44-1-mx-bin534 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Cyanobium

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Cyanobium sp. NIES-981

characteristic: project name

characteristic: sample derived from

text: Cyanobium sp. NIES-981

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-JE126-44-3-mx-bin535 - Bacteria; Bacteroidetes

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Chitinophaga pinensis

characteristic: organism

text: Chitinophaga pinensis

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-JE126-44-7-m2-bin31 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Bosea thiooxidans

characteristic: project name

characteristic: sample derived from

text: Bosea thiooxidans

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-JE510-14-13-m2-bin33 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Synechococcus sp. UW140

characteristic: organism

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-JE510-14-1-mx-bin543 - Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Porphyrobacter

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Erythrobacter sanguineus

characteristic: project name

characteristic: sample derived from

text: Erythrobacter sanguineus

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-JE510-14-2-mx-bin544 - Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Chitinophaga pinensis

characteristic: organism

text: Chitinophaga pinensis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-JE510-14-3-mx-bin545 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Hydrogenophaga intermedia

characteristic: project name

characteristic: sample derived from

text: Hydrogenophaga intermedia

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-JE510-14-4-m2-bin34 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Rhizobium sp. Q54

characteristic: organism

text: Rhizobium sp. Q54

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-JE510-14-5-m2-bin35 - Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Brevundimonas vancanneytii

characteristic: project name

characteristic: sample derived from

text: Brevundimonas vancanneytii

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-JE510-14-6-m1-bin249 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Rhizobium sp. Q54

characteristic: organism

text: Rhizobium sp. Q54

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: Biology Centre CAS

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-JE510-14-7-m1-bin250 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Bordetella parapertussis

characteristic: project name

characteristic: sample derived from

text: Bordetella parapertussis

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-JE510-14-7-m2-bin36 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Bradyrhizobium ivorense

characteristic: organism

text: Bradyrhizobium ivorense

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-JE510-14-7-mx-bin546 - Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Aquiflexum

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Aquiflexum balticum DSM 16537

characteristic: project name

characteristic: sample derived from

text: Aquiflexum balticum DSM 16537

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-JE510-14-8-m1-bin251 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tabrizicola

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Tabrizicola sp. YIM 78059

characteristic: organism

text: Tabrizicola sp. YIM 78059

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-JE510-14-9-m1-bin252 - Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Algoriphagus zhangzhouensis

characteristic: project name

characteristic: sample derived from

text: Algoriphagus zhangzhouensis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-JE510-14-9-mx-bin547 - Bacteria

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: bacterium

characteristic: organism

text: bacterium

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-JE51-08-11-m1-bin246 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Comamonas sp. lk

characteristic: project name

characteristic: sample derived from

text: Comamonas sp. lk

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-JE51-08-14-m2-bin32 - Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae; Flavipsychrobacter

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Flavipsychrobacter stenotrophus

characteristic: organism

text: Flavipsychrobacter stenotrophus

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-JE51-08-1-mx-bin536 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Synechococcus sp. UW140

characteristic: project name

characteristic: sample derived from

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-JE51-08-2-m1-bin247 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Rhizobium sp. Q54

characteristic: organism

text: Rhizobium sp. Q54

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-JE51-08-2-mx-bin537 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Hydrogenophaga intermedia

characteristic: project name

characteristic: sample derived from

text: Hydrogenophaga intermedia

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-JE51-08-3-mx-bin538 - Bacteria; Bacteroidetes

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Chitinophaga pinensis

characteristic: organism

text: Chitinophaga pinensis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-JE51-08-4-mx-bin539 - Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Porphyrobacter

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Erythrobacter sanguineus

characteristic: project name

characteristic: sample derived from

text: Erythrobacter sanguineus

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-JE51-08-5-mx-bin540 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tabrizicola

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Tabrizicola sp. YIM 78059

characteristic: organism

text: Tabrizicola sp. YIM 78059

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-JE51-08-6-m1-bin248 - Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Sphingomonadaceae bacterium Delta

characteristic: project name

characteristic: sample derived from

text: Sphingomonadaceae bacterium Delta

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-JE51-08-6-mx-bin541 - Bacteria; Proteobacteria; Alphaproteobacteria

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Rhizobium sp. Q54

characteristic: organism

text: Rhizobium sp. Q54

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-JE51-08-7-mx-bin542 - Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae; Sediminibacterium

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Sediminibacterium ginsengisoli

characteristic: project name

characteristic: sample derived from

text: Sediminibacterium ginsengisoli

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-JE53-10-013-mx-bin555 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Rhodobacter maris

characteristic: organism

text: Rhodobacter maris

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-JE53-10-017-mx-bin556 - Bacteria; Actinobacteria; Actinobacteria; Micrococcales

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Auritidibacter sp. Marseille-P8566

characteristic: project name

characteristic: sample derived from

text: Auritidibacter sp. Marseille-P8566

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-JE53-10-1-mx-bin548 - Bacteria; Bacteroidetes

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Chitinophaga pinensis

characteristic: organism

text: Chitinophaga pinensis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-JE53-10-2-m1-bin253 - Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Sphingomonadaceae bacterium Delta

characteristic: project name

characteristic: sample derived from

text: Sphingomonadaceae bacterium Delta

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-JE53-10-2-mx-bin549 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Synechococcus sp. UW140

characteristic: organism

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-JE53-10-3-mx-bin550 - Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae; Sediminibacterium

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Sediminibacterium ginsengisoli

characteristic: project name

characteristic: sample derived from

text: Sediminibacterium ginsengisoli

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-JE53-10-4-m1-bin254 - Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Pseudomonas synxantha

characteristic: organism

text: Pseudomonas synxantha

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-JE53-10-4-mx-bin551 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Hydrogenophaga intermedia

characteristic: project name

characteristic: sample derived from

text: Hydrogenophaga intermedia

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-JE53-10-5-mx-bin552 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Asaia bogorensis

characteristic: organism

text: Asaia bogorensis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-JE53-10-7-m1-bin255 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Acidovorax caeni

characteristic: project name

characteristic: sample derived from

text: Acidovorax caeni

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-JE53-10-7-mx-bin553 - Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Porphyrobacter

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Erythrobacter sanguineus

characteristic: organism

text: Erythrobacter sanguineus

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-JE53-10-9-m1-bin256 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Agrobacterium

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Agrobacterium sp. 719_389

characteristic: project name

characteristic: sample derived from

text: Agrobacterium sp. 719_389

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-JE53-10-9-mx-bin554 - Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Emticicia agri

characteristic: organism

text: Emticicia agri

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-JE56-12-012-mx-bin564 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Rhodobacter maris

characteristic: project name

characteristic: sample derived from

text: Rhodobacter maris

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-JE56-12-12-m1-bin257 - Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Novosphingobium sp. Chol11

characteristic: organism

text: Novosphingobium sp. Chol11

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker