characteristic: ENA first public

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characteristic: INSDC center name

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characteristic: SRA accession

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characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-KV10D3-173-6-m2-bin67 - Bacteria; Bacteroidetes

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Chitinophaga pinensis

characteristic: organism

text: Chitinophaga pinensis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


status: PUBLIC

tag: attribute

text: Biology Centre CAS

text: public

tag: Namespace:Biology Centre CAS

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

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characteristic: contamination score

text: JJ-KV10D3-173-8-mx-bin595 - Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Pseudomonas synxantha

characteristic: project name

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text: Pseudomonas synxantha

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: title


characteristic: ENA first public

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text: Biology Centre CAS

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text: coverage and kmer

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text: checkm

text: JJ-KV1159-161-1-m1-bin286 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales

characteristic: description

text: freshwater lake

text: lake

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characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Asaia bogorensis

characteristic: organism

text: Asaia bogorensis

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text: multi-marker approach

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text: Biology Centre CAS

text: public

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characteristic: binning parameters

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text: JJ-KV1159-161-2-mx-bin596 - Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae

text: freshwater lake

characteristic: environment (biome)

text: lake

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text: fresh water

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text: Czech Republic

characteristic: geographic location (latitude)

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text: metagenome-assembled genome

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text: Freshwater lake

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text: JJ-KV1159-161-3-mx-bin597 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

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text: freshwater lake

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characteristic: geographic location (country and/or sea)

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text: Bordetella parapertussis

characteristic: organism

text: Bordetella parapertussis

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text: Biology Centre CAS

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text: JJ-KV1159-161-4-mx-bin598 - Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas

text: freshwater lake

characteristic: environment (biome)

text: lake

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text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

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characteristic: metagenomic source

text: Brevundimonas vancanneytii

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characteristic: ENA first public

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text: Biology Centre CAS

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text: coverage and kmer

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text: JJ-KV1159-161-5-m1-bin287 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

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text: freshwater lake

text: lake

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characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

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text: Synechococcus sp. UW140

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characteristic: contamination score

text: JJ-KV1262-208-1-mx-bin599 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Vulcanococcus

text: freshwater lake

characteristic: environment (biome)

text: lake

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text: fresh water

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text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

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characteristic: metagenomic source

text: Vulcanococcus limneticus LL

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characteristic: ENA first public

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text: Biology Centre CAS

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text: JJ-KV1262-208-2-mx-bin600 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales

characteristic: description

text: freshwater lake

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characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

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text: Asaia bogorensis

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text: JJ-KV1262-208-3-mx-bin601 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas

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characteristic: environment (biome)

text: lake

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text: fresh water

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text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

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characteristic: metagenomic source

text: Polaromonas sp. YR568

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text: multi-marker approach


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text: MEGAHIT

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text: coverage and kmer

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text: JJ-KV1283-160-1-mx-bin602 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

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text: freshwater lake

text: lake

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text: metagenome-assembled genome

text: Freshwater lake

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text: Synechococcus sp. UW140

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text: coverage and kmer

characteristic: binning parameters

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text: checkm

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characteristic: contamination score

text: JJ-KV12D3-154-1-m2-bin68 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

text: freshwater lake

characteristic: environment (biome)

text: lake

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text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

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text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

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text: Synechococcus sp. UW140

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text: coverage and kmer

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text: JJ-KV12D3-154-2-mx-bin603 - Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas

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text: freshwater lake

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text: metagenome-assembled genome

text: Freshwater lake

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text: Pseudomonas synxantha

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text: Biology Centre CAS

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characteristic: binning parameters

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text: checkm

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text: JJ-KV12D3-154-3-mx-bin604 - Bacteria; Proteobacteria; Alphaproteobacteria

text: freshwater lake

characteristic: environment (biome)

text: lake

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text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Rhizobium sp. Q54

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text: JJ-KV12D3-154-4-mx-bin605 - Bacteria; Proteobacteria; Alphaproteobacteria

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text: Czech Republic

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text: metagenome-assembled genome

text: Freshwater lake

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text: Rhizobium sp. Q54

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text: Biology Centre CAS

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text: coverage and kmer

characteristic: binning parameters

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text: JJ-KV14-14-1-m2-bin69 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

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characteristic: metagenomic source

text: Asaia bogorensis

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characteristic: sequencing method

text: multi-marker approach


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text: Biology Centre CAS

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characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-KV14-14-1-mx-bin606 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Synechococcus sp. UW140

characteristic: organism

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: Biology Centre CAS

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

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characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-KV14-14-2-m1-bin288 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Synechococcus sp. UW140

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text: Synechococcus sp. UW140

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text: multi-marker approach

characteristic: taxonomic identity marker


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text: Biology Centre CAS

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text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-KV16-15-1-m1-bin289 - Bacteria

characteristic: description

text: freshwater lake

text: lake

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text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: bacterium Ga0077546

characteristic: organism

text: bacterium Ga0077546

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

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text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-KV16-15-1-m2-bin70 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Ramlibacter sp. 2FC

characteristic: project name

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text: Ramlibacter sp. 2FC

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

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text: Biology Centre CAS

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text: public

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text: MEGAHIT

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text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-KV16-15-1-mx-bin607 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

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text: Synechococcus sp. UW140

characteristic: organism

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

text: multi-marker approach

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text: Biology Centre CAS

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text: coverage and kmer

characteristic: binning parameters

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text: checkm

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characteristic: contamination score

text: JJ-KV16-15-4-m1-bin290 - Bacteria; Proteobacteria; Alphaproteobacteria

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Rhizobium sp. Q54

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text: Rhizobium sp. Q54

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

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text: Biology Centre CAS

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text: public

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characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-KV16-15-5-m1-bin291 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Ancylobacter

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Ancylobacter rudongensis

characteristic: organism

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text: multi-marker approach

characteristic: title


text: Biology Centre CAS

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text: coverage and kmer

characteristic: binning parameters

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text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-KV19-16-1-m2-bin71 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Synechococcus sp. UW140

characteristic: project name

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text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

text: multi-marker approach

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text: Biology Centre CAS

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text: public

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characteristic: SRA accession

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characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-KV216-33-1-m1-bin292 - Bacteria; Proteobacteria; Gammaproteobacteria; Nevskiales; Sinobacteraceae; Hydrocarboniphaga; Hydrocarboniphaga effusa

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Hydrocarboniphaga effusa AP103

characteristic: organism

text: Hydrocarboniphaga effusa AP103

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-KV216-33-1-mx-bin608 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Synechococcus sp. UW140

characteristic: project name

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text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


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text: Biology Centre CAS

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text: public

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characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-KV216-33-2-m1-bin293 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax; Variovorax paradoxus

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Variovorax paradoxus

characteristic: organism

text: Variovorax paradoxus

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: Biology Centre CAS

text: public

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text: coverage and kmer

characteristic: binning parameters

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characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-KV216-33-3-m1-bin294 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Rhizobium sp. Q54

characteristic: project name

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text: Rhizobium sp. Q54

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-KV216-33-5-mx-bin609 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Polaromonas sp. YR568

characteristic: organism

text: Polaromonas sp. YR568

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

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characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-KV5C6-239-2-mx-bin610 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Synechococcus sp. UW140

characteristic: project name

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text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

text: multi-marker approach

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characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

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text: public

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characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-KV7-12-2-m1-bin295 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Synechococcus sp. UW140

characteristic: organism

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

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text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-KV7-12-2-mx-bin611 - Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas fluorescens

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Pseudomonas fluorescens

characteristic: project name

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text: Pseudomonas fluorescens

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


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characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

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text: public

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characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-KV7-12-3-mx-bin612 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Synechococcus sp. UW140

characteristic: organism

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

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text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-KV8A6-267-2-m2-bin72 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Paracoccus haematequi

characteristic: project name

characteristic: sample derived from

text: Paracoccus haematequi

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-KV8A6-267-2-mx-bin613 - Bacteria; Bacteroidetes

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Chitinophaga pinensis

characteristic: organism

text: Chitinophaga pinensis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

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characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-KV8A6-267-3-m1-bin296 - Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Caulobacter sp. UNC279MFTsu5.1

characteristic: project name

characteristic: sample derived from

text: Caulobacter sp. UNC279MFTsu5.1

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

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text: public

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characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-KV8A6-267-3-m2-bin73 - Bacteria; Cyanobacteria; Synechococcales; Pseudanabaenaceae; Pseudanabaena

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Pseudanabaena sp. UWO311

characteristic: organism

text: Pseudanabaena sp. UWO311

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-KV8A6-267-4-m1-bin297 - Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Pseudomonas synxantha

characteristic: project name

characteristic: sample derived from

text: Pseudomonas synxantha

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


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characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

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text: public

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characteristic: SRA accession

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characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-KV8A6-267-5-m1-bin298 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Acidovorax caeni

characteristic: organism

text: Acidovorax caeni

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-KV9-13-1-m1-bin299 - Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Archangiaceae; Archangium

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Archangium gephyra

characteristic: project name

characteristic: sample derived from

text: Archangium gephyra

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

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characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-KV9-13-1-mx-bin614 - Bacteria; Cyanobacteria; Oscillatoriales; Oscillatoriaceae

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Phormidium lacuna HE10JO

characteristic: organism

text: Phormidium lacuna HE10JO

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

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text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-KV9-13-3-m1-bin300 - Bacteria; Cyanobacteria; Synechococcales; Pseudanabaenaceae; Pseudanabaena

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Pseudanabaena sp. UWO311

characteristic: project name

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text: Pseudanabaena sp. UWO311

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


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text: Biology Centre CAS

characteristic: INSDC center name

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text: public

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text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-KV9-13-4-m2-bin74 - Bacteria; Planctomycetes; Planctomycetia

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Singulisphaera sp. GP187

characteristic: organism

text: Singulisphaera sp. GP187

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-KV9-13-7-mx-bin615 - Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Pseudomonas putida

characteristic: project name

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text: Pseudomonas putida

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-KVS114-11-1-m1-bin301 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Synechococcus sp. UW140

characteristic: organism

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-KVS114-11-2-m2-bin75 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Variovorax sp. YR752

characteristic: project name

characteristic: sample derived from

text: Variovorax sp. YR752

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-KVS216-79-1-mx-bin616 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Synechococcus sp. UW140

characteristic: organism

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-KVS218-80-1-mx-bin617 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Synechococcus sp. UW140

characteristic: project name

characteristic: sample derived from

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-KVS218-80-2-m2-bin76 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Ramlibacter sp. 2FC

characteristic: organism

text: Ramlibacter sp. 2FC

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-KVS218-80-2-mx-bin618 - Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Pseudomonas synxantha

characteristic: project name

characteristic: sample derived from

text: Pseudomonas synxantha

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-KVS218-80-3-m2-bin77 - Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Sterolibacteriaceae; Methyloversatilis

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Methyloversatilis sp. RAC08

characteristic: organism

text: Methyloversatilis sp. RAC08

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-L4C1C4A3-408-1-m1-bin302 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Synechococcus sp. UW140

characteristic: project name

characteristic: sample derived from

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-LA1A6-383-1-mx-bin619 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Synechococcus sp. UW140

characteristic: organism

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-LA1A6-383-2-m1-bin303 - Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Sterolibacteriaceae; Methyloversatilis; Methyloversatilis discipulorum

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Methyloversatilis discipulorum

characteristic: project name

characteristic: sample derived from

text: Methyloversatilis discipulorum

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: cat scratch disease bacillus

characteristic: common name

text: checkm

text: JJ-LA1A6-383-2-m2-bin78 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Afipia felis

characteristic: organism

text: Afipia felis

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-LA1A6-383-3-m1-bin304 - Bacteria; Bacteroidetes

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Chitinophaga pinensis

characteristic: project name

characteristic: sample derived from

text: Chitinophaga pinensis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-LA1A6-383-5-m1-bin305 - Bacteria; Proteobacteria; Alphaproteobacteria

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Rhizobium sp. Q54

characteristic: organism

text: Rhizobium sp. Q54

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-LA1A6-383-5-mx-bin620 - Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Archangiaceae; Archangium

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Archangium gephyra

characteristic: project name

characteristic: sample derived from

text: Archangium gephyra

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-LAS318-81-1-m1-bin306 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Azospirillum sp. RU38E

characteristic: organism

text: Azospirillum sp. RU38E

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-LAS318-81-1-m2-bin79 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Bosea thiooxidans

characteristic: project name

characteristic: sample derived from

text: Bosea thiooxidans

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-LAS318-81-2-m1-bin307 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Polaromonas sp. YR568

characteristic: organism

text: Polaromonas sp. YR568

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-LAS318-81-4-m1-bin308 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Synechococcus sp. UW140

characteristic: project name

characteristic: sample derived from

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-LAS318-81-5-m1-bin309 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Synechococcus sp. UW140

characteristic: organism

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-LAS318NA6-149-1-m1-bin310 - Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Pseudomonas synxantha

characteristic: project name

characteristic: sample derived from

text: Pseudomonas synxantha

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-LAS318NA6-149-1-mx-bin621 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Synechococcus sp. UW140

characteristic: organism

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-LAS318NA6-149-3-m1-bin311 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Bosea thiooxidans

characteristic: project name

characteristic: sample derived from

text: Bosea thiooxidans

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-LAS318NA6-149-3-mx-bin622 - Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Chitinophaga pinensis

characteristic: organism

text: Chitinophaga pinensis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-LAS318NC5-148-1-mx-bin623 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Synechococcus sp. UW140

characteristic: project name

characteristic: sample derived from

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-LAS318NC5-148-2-mx-bin624 - Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Pseudomonas synxantha

characteristic: organism

text: Pseudomonas synxantha

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-LAS318NC5-148-4-m2-bin80 - Bacteria

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: bacterium

characteristic: project name

characteristic: sample derived from

text: bacterium

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-LAS318NC5-148-5-mx-bin625 - Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Caulobacter sp. UNC279MFTsu5.1

characteristic: organism

text: Caulobacter sp. UNC279MFTsu5.1

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-LAS318NC5-148-6-m2-bin81 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Alsobacter

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Alsobacter soli

characteristic: project name

characteristic: sample derived from

text: Alsobacter soli

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-LAS318NC5-148-8-m2-bin82 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Rhizobium sp. Q54

characteristic: organism

text: Rhizobium sp. Q54

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-LAS318NC5-148-8-mx-bin626 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Bordetella parapertussis

characteristic: project name

characteristic: sample derived from

text: Bordetella parapertussis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-LAS36-244-1-mx-bin627 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Synechococcus sp. UW140

characteristic: organism

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-LAS36-244-2-mx-bin628 - Bacteria; Bacteroidetes

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Chitinophaga pinensis

characteristic: project name

characteristic: sample derived from

text: Chitinophaga pinensis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-LAS36-244-3-mx-bin629 - Bacteria; Cyanobacteria; Synechococcales; Pseudanabaenaceae; Pseudanabaena

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Pseudanabaena sp. UWO311

characteristic: organism

text: Pseudanabaena sp. UWO311

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-LAS36-244-4-mx-bin630 - Bacteria; Chlorobi; Chlorobia

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Prosthecochloris vibrioformis

characteristic: project name

characteristic: sample derived from

text: Prosthecochloris vibrioformis

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-LAS36-244-6-m1-bin312 - Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Sphingomonas paucimobilis

characteristic: organism

text: Sphingomonas paucimobilis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-LAS36-244-6-mx-bin631 - Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Pseudomonas synxantha

characteristic: project name

characteristic: sample derived from

text: Pseudomonas synxantha

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-LAS36-244-7-mx-bin632 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Polynucleobacter meluiroseus

characteristic: organism

text: Polynucleobacter meluiroseus

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: Biology Centre CAS

text: public

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-LAS36-244-8-m1-bin313 - Bacteria; Bacteroidetes

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Chitinophaga pinensis

characteristic: project name

characteristic: sample derived from

text: Chitinophaga pinensis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Biology Centre CAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT

characteristic: assembly software

text: coverage and kmer

characteristic: collection date

text: checkm

text: JJ-LAS36-244-9-mx-bin633 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Piscinibacter

characteristic: description

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Piscinibacter defluvii

characteristic: organism

text: Piscinibacter defluvii

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: Biology Centre CAS

text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: MEGAHIT

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: JJ-LAS39-17-1-m2-bin83 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Synechococcus sp. UW140

characteristic: project name

characteristic: sample derived from

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

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text: JJ-LAS39-17-1-mx-bin634 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

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text: Freshwater lake

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text: Synechococcus sp. UW140

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text: Synechococcus sp. UW140

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text: JJ-LAS39-17-4-m2-bin84 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus

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text: JJ-LI2210-88-1-m2-bin85 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae

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text: JJ-LI2210-88-2-mx-bin635 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax

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characteristic: environment (biome)

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text: JJ-LUK12B-28-10-m1-bin314 - Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae

characteristic: description

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text: Fimbriimonas ginsengisoli Gsoil 348

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text: JJ-LUK12B-28-11-m2-bin86 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea

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characteristic: environment (biome)

text: lake

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text: fresh water

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text: metagenome-assembled genome

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text: Freshwater lake

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text: Bosea thiooxidans

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text: Rhizobium sp. Q54

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text: JJ-LUK12B-28-3-m1-bin315 - Bacteria; Cyanobacteria; Synechococcales; Pseudanabaenaceae; Pseudanabaena

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text: metagenome-assembled genome

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text: Pseudanabaena sp. UWO311

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text: Mesorhizobium carmichaelinearum

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text: Afipia felis

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text: JJ-LUK12B-28-6-m1-bin317 - Bacteria; Bacteroidetes

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characteristic: environment (biome)

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text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

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text: Chitinophaga pinensis

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