text: public

text: Japanese rice

text: Irat 307

text: French Guiana

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


status: PUBLIC

characteristic: ENA first public

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Instituto Valenciano de Investigaciones Agrarias

characteristic: Submitter Id

characteristic: collection date

text: Japanese rice

characteristic: common name

text: Irat 320

characteristic: description

text: French Guiana

characteristic: geographic location (country and/or sea)

text: Oryza sativa Japonica Group

characteristic: organism

text: Oryza sativa Japonica Group

characteristic: title


text: Instituto Valenciano de Investigaciones Agrarias

text: public

text: Japanese rice

text: Irat 350

text: French Guiana

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Jsendra

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Kalao

text: France

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Kinmaze

text: Japan

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: koshihikari

text: Japan

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: USA

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Leda

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Lemont

text: USA

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Litchikiang

text: China

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Italica Livorno

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Loto

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Marisma

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Marjal

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Moroberekan

text: Guinea

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Nano

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Nipponbare

text: Japan

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: long-grained rice

text: Norin 8

text: Japan

text: Oryza sativa Indica Group

text: Oryza sativa Indica Group


text: public

text: Japanese rice

text: Nuevo Maratelli

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Opale

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Pavlovsky

text: Russia

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Pegonil

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: long-grained rice

text: PUITA

text: Argentina

text: Oryza sativa Indica Group

text: Oryza sativa Indica Group


text: public

text: Japanese rice

text: Puntal

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Ricastello

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Rivera

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Romolo

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Sarcet

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Savio

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Senia

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Sequial

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: SIS R215

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Sivert

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Tainung 67

text: Taiwan

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Ullal

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Urano

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Venere

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Zhonghua 15

text: China

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Benlloch

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Colusa

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Insen x Tremesino

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Tebre

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Argila

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Olesa

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Albada

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Betis

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Clot

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Jucar

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Mareny

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Niva

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Balilla

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Colina

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Bomb—n

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Liso

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Sollana

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Dosel

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Clavel

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Susi

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Montsianell

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Carnaroli

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Icaro

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Deneb

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Fragrance

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Giano

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Poseidone

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Genio

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Maratelli

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Lido

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Antares

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Cerere

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Giglio

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Millin

text: Australia

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Langhi

text: Australia

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Kyeema

text: Australia

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Illabong

text: Australia

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Amaroo

text: Australia

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: USA

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Newbonnet

text: USA

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Bluebonnet

text: USA

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Calbelle

text: USA

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Tebonnet

text: USA

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Labelle

text: USA

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Maybelle

text: USA

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Mars

text: USA

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Northrose

text: USA

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Nova 66

text: USA

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Katy

text: USA

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Ganao

text: France

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Adret

text: France

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Matusaska

text: Japan

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: YR 71011

text: Australia

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Capataz

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Frances

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Fuzisaka

text: Japan

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Mangetsumochi

text: Japan

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Italy

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Sigikari

text: Japan

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Centa A6

text: El Salvador

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Lady Wright

text: USA

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Daekwanbyeo

text: South Korea

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: long-grained rice

text: Giza 181

text: Egypt

text: Oryza sativa Indica Group

text: Oryza sativa Indica Group


text: public

text: long-grained rice

text: Giza 178

text: Egypt

text: Oryza sativa Indica Group

text: Oryza sativa Indica Group


text: public

text: Japanese rice

text: Nam Yang

text: South Korea

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Alena

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: ESTANY

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Gageron

text: France

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Gines

text: France

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: GUADIAGRAN

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: GUARA

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: HISPAGRAN

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Hispalong

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: HISPAMAR

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: SOTO

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Teti

text: Portugal

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: REGINA

text: Spain

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: public

text: Japanese rice

text: Muga

text: Portugal

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group


text: Anopheles gambiae

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: not provided

text: African malaria mosquito

text: not provided

text: Anopheles gambiae

text: Anopheles gambiae


text: IBSAL

text: public

text: human

text: Spain

text: Homo sapiens

text: Homo sapiens


text: CNRS and university of Rennes 1

text: public

text: lithosphere

characteristic: broad-scale environmental context

unit: m

characteristic: depth

text: Culture of Ferriphaselus amnicola strain GF-20 in liquid culture (Modified Wolfe's Mineral medium, 500 µM of dissolved Fe(II), oxygen concentration : 3 µM O2). The strain was isolated from groundwater collected in the fracture F20 of the PZ26 borehole Ploemeur-Guidel aquifer observatory (French network of hydrogeological observatories H+ (http://hplus.ore.fr/en) and French network of Critical Zone observatories OZCAR (http://www.ozcar-ri.org/)

text: groundwater

characteristic: environmental medium

text: France

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Brittany Guidel

characteristic: geographic location (region and locality)

text: aquifer

characteristic: local environmental context

text: Ferriphaselus amnicola

text: French National Research Agency (ANR) project IRONSTONE (ANR-21-CE01-0008) and European Research Council (ERC) project ReactiveFronts (648377)

characteristic: project name

text: Ferriphaselus amnicola

text: culture of GF-20 sample number 3


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: University of Cambridge

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: not provided

text: Nepal

text: Salmonella enterica subsp. enterica serovar Paratyphi A


01TY 544

text: University of Cambridge

text: public

text: 01TY 544

characteristic: Submitter Id

text: not provided

characteristic: collection date

text: 01TY 544

characteristic: description

text: Nepal

characteristic: geographic location (country and/or sea)

text: 01TY 544


01TY 553

text: University of Cambridge

text: public

text: 01TY 553

text: not provided

text: 01TY 553

text: Nepal

characteristic: organism

text: 01TY 553

characteristic: title


01TY 571

text: University of Cambridge

text: public

text: 01TY 571

text: not provided

text: 01TY 571

text: Nepal

text: 01TY 571


01TY 582

text: University of Cambridge

text: public

text: 01TY 582

text: not provided

text: 01TY 582

text: Nepal

text: 01TY 582


01TY 592

text: University of Cambridge

text: public

text: 01TY 592

text: not provided

text: 01TY 592

text: Nepal

text: 01TY 592


01TY 612

text: University of Cambridge

text: public

text: 01TY 612

text: not provided

text: 01TY 612

text: Nepal

text: 01TY 612


01TY 533

text: University of Cambridge

text: public

text: 01TY 533

text: not provided

text: 01TY 533

text: Nepal

text: 01TY 533


01TY 545

text: University of Cambridge

text: public

text: 01TY 545

text: not provided

text: 01TY 545

text: Nepal

text: 01TY 545


01TY 547

text: University of Cambridge

text: public

text: 01TY 547

text: not provided

text: 01TY 547

text: Nepal

text: 01TY 547


01TY 572

text: University of Cambridge

text: public

text: 01TY 572

text: not provided

text: 01TY 572

text: Nepal

text: 01TY 572


01TY 534

text: University of Cambridge

text: public

text: 01TY 534

text: not provided

text: 01TY 534

text: Nepal

text: 01TY 534


text: public

text: Ascites samples short-read sequencing of the fungal ITS2 region using Miseq 2x250 bp paired-end sequencing

text: Germany

text: metagenome

text: metagenome

text: Ascites sample


text: public

text: Positive control short-read sequencing of the fungal ITS2 region using Miseq 2x250 bp paired-end sequencing

text: Germany

text: metagenome

text: metagenome

text: Positive control


text: KIS

text: public

unit: year

characteristic: age

text: ArrayExpress

characteristic: broker name

text: leukocyte

text: not collected

text: Rhesus monkey

characteristic: common name

text: Protocols: Cecum dissected ex vivo and processed for cecal patch-lamina propria cell enrichment, FACS, and genomics within 10 hours of sample collection. According to 10X protocols carried out by SciLifeLab Stockholm According to 10X protocols carried out by SciLifeLab Stockholm

text: not collected

text: not applicable

characteristic: isolate

text: Macaca mulatta

text: Macaca mulatta

text: cecum

characteristic: organism part

text: Macaca mulatta

text: female

characteristic: sex

text: Cecum


text: Anopheles gambiae

characteristic: ArrayExpress-SPECIES

characteristic: ENA first public

text: SC

text: public

text: not provided

text: African malaria mosquito

text: not provided

text: Anopheles gambiae

text: Anopheles gambiae


text: Anopheles gambia

characteristic: ENA-CHECKLIST

text: SC

characteristic: INSDC center name

text: public

text: not provided

text: African malaria mosquito

text: not provided

text: Anopheles gambiae

text: Anopheles gambiae


text: IATA-CSIC

text: public

characteristic: INSDC status

characteristic: SRA accession

text: excreta material

characteristic: broad-scale environmental context

text: human

text: amplicon pool 1

text: feces

characteristic: environmental medium

text: Portugal

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Leiria

characteristic: geographic location (region and locality)

text: fecal environment

characteristic: local environmental context

text: Homo sapiens

text: Kinship perspective study on subjects with celiac disease with first-degree non-celiac relatives

characteristic: project name

text: PMID: 35604764

characteristic: relevant standard operating procedures

text: Homo sapiens

text: 16S, ITS, 23S

characteristic: target gene

text: Fecal DNA


text: IATA-CSIC

text: public

characteristic: Submitter Id

text: excreta material

characteristic: collection date

text: human

characteristic: common name

text: amplicon pool 2

characteristic: description

text: feces

text: Portugal

characteristic: geographic location (country and/or sea)

text: Leiria

text: fecal environment

text: Homo sapiens

characteristic: organism

text: PMID: 35604764

text: Homo sapiens

text: 16S, ITS, 23S

text: Fecal DNA

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: IATA-CSIC

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: excreta material

text: human

text: amplicon pool 3

text: feces

text: Portugal

text: Leiria

text: fecal environment

text: Homo sapiens

text: PMID: 35604764

text: Homo sapiens

text: 16S, ITS, 23S

text: Fecal DNA


text: IATA-CSIC

text: public

text: excreta material

characteristic: broad-scale environmental context

text: human

text: amplicon pool 4

text: feces

characteristic: environmental medium

text: Portugal

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Leiria

characteristic: geographic location (region and locality)

text: fecal environment

text: Homo sapiens

text: PMID: 35604764

text: Homo sapiens

text: 16S, ITS, 23S

text: Fecal DNA


text: IATA-CSIC

text: public

characteristic: Submitter Id

text: excreta material

text: human

text: amplicon pool 5

text: feces

text: Portugal

text: Leiria

text: fecal environment

characteristic: local environmental context

text: Homo sapiens

characteristic: project name

text: PMID: 35604764

characteristic: relevant standard operating procedures

text: Homo sapiens

text: 16S, ITS, 23S

characteristic: target gene

text: Fecal DNA


text: IATA-CSIC

text: public

text: excreta material

characteristic: collection date

text: human

characteristic: common name

text: amplicon pool 6

characteristic: description

text: feces

text: Portugal

characteristic: geographic location (country and/or sea)

text: Leiria

text: fecal environment

text: Homo sapiens

characteristic: organism

text: PMID: 35604764

text: Homo sapiens

text: 16S, ITS, 23S

text: Fecal DNA


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: DBM

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: human

text: Bone marrow isolated from mice after primary transplant of sgNTC HSPC, followed by CIM053-SG3376 treatment

text: Switzerland

text: Homo sapiens

text: Homo sapiens

characteristic: title


text: DBM

text: public

characteristic: SRA accession

text: human

text: Bone marrow isolated from mice after primary transplant of sgNTC HSPC, followed by saline treatment

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: Bone marrow isolated from mice after primary transplant of sg49.3 HSPC, followed by CIM053-SG3376 treatment

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: Bone marrow isolated from mice after primary transplant of sg49.3 HSPC, followed by saline treatment

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: sg49.3 HSPC

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: sgNTC HSPC

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: Spleen isolated from mice after primary transplant of sgNTC HSPC, followed by CIM053-SG3376 treatment

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: Spleen isolated from mice after primary transplant of sgNTC HSPC, followed by saline treatment

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: Spleen isolated from mice after primary transplant of sg49.3 HSPC, followed by CIM053-SG3376 treatment

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: Spleen isolated from mice after primary transplant of sg49.3 HSPC, followed by saline treatment

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: Spleen isolated from mice after secondary transplant of sgNTC HSPC, followed by CIM053-SG3376 treatment

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: Spleen isolated from mice after secondary transplant of sgNTC HSPC, followed by saline treatment

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: Spleen isolated from mice after secondary transplant of sg49.3 HSPC, followed by CIM053-SG3376 treatment

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: Spleen isolated from mice after secondary transplant of sg49.3 HSPC, followed by saline treatment

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: sg49 HSPC

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: Mice engrafted with sg49.3 HSPC, followed by saline treatment

text: Spleen

characteristic: engrafted tumor collection site

text: NBSGW

characteristic: engraftment host strain name

text: Switzerland

text: Homo sapiens

characteristic: patient age at collection of tumor

text: AML

characteristic: patient tumor diagnosis at time of collection

characteristic: patient tumor primary site

characteristic: patient tumor site of collection

text: AML

characteristic: patient tumor type

text: Single cell suspension

characteristic: sample material

text: Spleen

characteristic: sample origin

characteristic: sample taxon name

characteristic: sample unique ID

text: Homo sapiens

text: Yes with sg49.3 HSPC

characteristic: was the PDX model humanised?


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: DBM

text: public

characteristic: Submitter Id

characteristic: collection date

text: human

characteristic: common name

text: Mice engrafted with sg49.3 HSPC, followed by PDX injection and saline treatment

characteristic: description

text: Spleen

text: NBSGW

text: Switzerland

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: organism

text: AML

text: AML

text: Single cell suspension

text: Spleen

text: Homo sapiens

text: Yes with sg49.3 HSPC


text: DBM

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: human

text: Spleen

characteristic: engrafted tumor collection site

text: NBSGW

characteristic: engraftment host strain name

text: Switzerland

text: Homo sapiens

text: AML

characteristic: patient tumor diagnosis at time of collection

text: AML

text: Single cell suspension

text: Spleen

text: Homo sapiens

text: Yes with sg49.3 HSPC


text: DBM

text: public

text: human

text: Mice engrafted with sg49.3 HSPC, followed by PDX  injection and CIM053-SG3376 treatment

text: Spleen

text: NBSGW

text: Switzerland

text: Homo sapiens

text: AML

text: AML

characteristic: patient tumor type

text: Single cell suspension

characteristic: sample material

text: Spleen

characteristic: sample origin

text: Homo sapiens

text: Yes with sg49.3 HSPC


characteristic: ENA first public

text: DBM

text: public

text: human

text: Mice engrafted with sg49.3 HSPC, followed by PDX injection

text: Spleen

text: NBSGW

text: Switzerland

text: Homo sapiens

text: AML

text: AML

text: Single cell suspension

text: Spleen

text: Homo sapiens

text: Yes with sg49.3 HSPC

characteristic: was the PDX model humanised?


characteristic: ENA-CHECKLIST

text: DBM

text: public

characteristic: Submitter Id

text: human

text: Mice engrafted with sgNTC HSPC

text: Spleen

text: NBSGW

text: Switzerland

text: Homo sapiens

text: AML

text: AML

text: Single cell suspension

text: Spleen

text: Homo sapiens

text: Yes with sgNTC HSPC


text: DBM

text: public

characteristic: collection date

text: human

characteristic: common name

text: Mice engrafted with sg49.3 HSPC

text: Spleen

text: NBSGW

text: Switzerland

text: Homo sapiens

text: AML

text: AML

text: Single cell suspension

text: Spleen

text: Homo sapiens

text: Yes with sg49.3 HSPC


text: DBM

text: public

text: human

text: Mice engrafted with sgNTC HSPC, followed by PDX injection

characteristic: description

text: Spleen

text: NBSGW

text: Switzerland

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: AML

text: AML

text: Single cell suspension

text: Spleen

text: Homo sapiens

text: Yes with sgNTC HSPC


text: DBM

characteristic: INSDC center name

text: public

text: human

text: Mice engrafted with sgNTC HSPC, followed by PDX injection and CIM053-SG3376 treatment

text: Spleen

text: NBSGW

text: Switzerland

text: Homo sapiens

characteristic: organism

text: AML

text: AML

text: Single cell suspension

text: Spleen

text: Homo sapiens

text: Yes with sgNTC HSPC


text: DBM

text: public

characteristic: INSDC status

characteristic: SRA accession

text: human

text: Mice engrafted with sgNTC HSPC, followed by saline treatment

text: Spleen

text: NBSGW

text: Switzerland

text: Homo sapiens

text: AML

text: AML

text: Single cell suspension

text: Spleen

text: Homo sapiens

text: Yes with sgNTC HSPC


text: DBM

text: public

text: human

text: Mice engrafted with sgNTC HSPC, followed by PDX injection and saline treatment

text: Spleen

characteristic: engrafted tumor collection site

text: NBSGW

characteristic: engraftment host strain name

text: Switzerland

text: Homo sapiens

text: AML

text: AML

text: Single cell suspension

text: Spleen

text: Homo sapiens

text: Yes with sgNTC HSPC


text: DBM

text: public

text: human

text: Bone Marrow

text: NBSGW

text: Switzerland

text: Homo sapiens

text: AML

characteristic: patient tumor diagnosis at time of collection

text: AML

characteristic: patient tumor type

text: Single cell suspension

text: Bone Marrow

text: Homo sapiens

text: Yes with sg49.3 HSPC


text: DBM

text: public

text: human

text: Bone Marrow

text: NBSGW

text: Switzerland

text: Homo sapiens

text: AML

text: AML

text: Single cell suspension

characteristic: sample material

text: Bone Marrow

characteristic: sample origin

text: Homo sapiens

text: Yes with sg49.3 HSPC


characteristic: ENA first public

text: DBM

text: public

text: human

text: Bone Marrow

text: NBSGW

text: Switzerland

text: Homo sapiens

text: AML

text: AML

text: Single cell suspension

text: Bone Marrow

text: Homo sapiens

text: Yes with sg49.3 HSPC

characteristic: was the PDX model humanised?


characteristic: ENA-CHECKLIST

text: DBM

text: public

characteristic: Submitter Id

text: human

text: Bone Marrow

text: NBSGW

text: Switzerland

text: Homo sapiens

text: AML

text: AML

text: Single cell suspension

text: Bone Marrow

text: Homo sapiens

text: Yes with sg49.3 HSPC


text: DBM

text: public

characteristic: collection date

text: human

characteristic: common name

text: Mice engrafted with sgNTC HSPC

text: Bone Marrow

text: NBSGW

text: Switzerland

text: Homo sapiens

text: AML

text: AML

text: Single cell suspension

text: Bone Marrow

text: Homo sapiens

text: Yes with sgNTC HSPC


text: DBM

text: public

text: human

text: Mice engrafted with sg49.3 HSPC

characteristic: description

text: Bone Marrow

text: NBSGW

text: Switzerland

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: AML

text: AML

text: Single cell suspension

text: Bone Marrow

text: Homo sapiens

text: Yes with sg49.3 HSPC


text: DBM

characteristic: INSDC center name

text: public

text: human

text: Bone Marrow

text: NBSGW

text: Switzerland

text: Homo sapiens

characteristic: organism

text: AML

text: AML

text: Single cell suspension

text: Bone Marrow

text: Homo sapiens

text: Yes with sgNTC HSPC


text: DBM

text: public

characteristic: INSDC status

characteristic: SRA accession

text: human

text: Bone Marrow

text: NBSGW

text: Switzerland

text: Homo sapiens

text: AML

text: AML

text: Single cell suspension

text: Bone Marrow

text: Homo sapiens

text: Yes with sgNTC HSPC


text: DBM

text: public

text: human

text: Bone Marrow

characteristic: engrafted tumor collection site

text: NBSGW

characteristic: engraftment host strain name

text: Switzerland

text: Homo sapiens

text: AML

text: AML

text: Single cell suspension

text: Bone Marrow

text: Homo sapiens

text: Yes with sgNTC HSPC


text: DBM

text: public

text: human

text: Bone Marrow

text: NBSGW

text: Switzerland

text: Homo sapiens

text: AML

characteristic: patient tumor diagnosis at time of collection

text: AML

characteristic: patient tumor type

text: Single cell suspension

text: Bone Marrow

text: Homo sapiens

text: Yes with sgNTC HSPC


text: DBM

text: public

text: human

text: human PBMC

text: Switzerland

text: Homo sapiens

text: Homo sapiens

characteristic: title


characteristic: ENA first public

text: DBM

text: public

text: human

text: Bone marrow isolated from mice after primary transplant of sg49.3 HSPC, followed by CIM053-SG3376 treatment

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: Bone marrow isolated from mice after primary transplant of sg49.3 HSPC, followed by saline treatment

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: Bone marrow isolated from mice after primary transplant of sgNTC HSPC, followed by saline treatment

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: Spleen isolated from mice after primary transplant of sg49.3 HSPC, followed by CIM053-SG3376 treatment

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: Spleen isolated from mice after primary transplant of sg49.3 HSPC, followed by saline treatment

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: Spleen isolated from mice after primary transplant of sgNTC HSPC, followed by saline treatment

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: Spleen isolated from mice after secondary transplant of sgNTC HSPC, followed by saline treatment

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: sgNTC HSPC

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: DBM

text: public

text: human

text: sg49.3 HSPC

text: Switzerland

text: Homo sapiens

text: Homo sapiens


text: Kyung Hee University

text: public

text: ArrayExpress

characteristic: broker name

text: not collected

text: Japanese rice

text: Dongjin

characteristic: cultivar

text: Protocols: Stages 13-14 anthers carrying tricellular stages pollen were collected. Seeds of japonica rice cv. Nipponbare were grown in the greenhouse for 4 weeks and transferred to the paddy field.  Mature anthers were frozen in LN2 and finely ground using Tissuelyser (QIAGEN). Then, total RNA was extracted using the MiniBEST Plant RNA Extraction Kit (Takakra, Japan) according to the manufacturer’s instructions. The sequencing library is prepared by random fragmentation of the DNA or cDNA sample, followed by 5' and 3' adapter ligation. Alternatively, \"tagmentation\" combines the fragmentation and ligation reactions into a single step that greatly increases the efficiency of the library preparation process. Adapter-ligated fragments are then PCR amplified and gel purified.

text: wild type genotype

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group

text: anther

characteristic: organism part

text: Oryza sativa Japonica Group


characteristic: ENA-CHECKLIST

text: Kyung Hee University

text: public

characteristic: Submitter Id

text: ArrayExpress

text: not collected

characteristic: collection date

text: Japanese rice

characteristic: common name

text: Dongjin

characteristic: description

text: OsCNGC4, OsCNGC5 double knockout

text: not collected

text: not applicable

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group

text: anther

text: Oryza sativa Japonica Group


text: Pusan National University

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: swab

characteristic: broad-scale environmental context

text: swab

text: swab

characteristic: environmental medium

text: South Korea

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: swab

characteristic: local environmental context

text: clinical metagenome

characteristic: organism

characteristic: project name

text: clinical metagenome


characteristic: ENA first public

text: Pusan National University

text: public

text: saliva

text: saliva

text: saliva

text: South Korea

text: saliva

text: clinical metagenome

text: clinical metagenome

characteristic: title


characteristic: ENA-CHECKLIST

text: Pusan National University

text: public

characteristic: Submitter Id

text: plaque

text: plaque

text: plaque

text: South Korea

text: plaque

text: clinical metagenome

text: clinical metagenome


text: Pusan National University

text: public

text: palque

characteristic: collection date

text: palque

text: palque

text: South Korea

text: palque

text: clinical metagenome

text: clinical metagenome


text: DTU National Food Institute

text: public

text: Test strain used in EURGen-RefLabCap EQA 2023

characteristic: description

text: Denmark

text: not applicable

characteristic: host health state

text: not applicable

characteristic: host scientific name

characteristic: isolate

text: Unknown

text: Acinetobacter baumannii

text: Acinetobacter baumannii


text: DTU National Food Institute

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E. coli

characteristic: common name

text: Denmark

text: not applicable

text: not applicable

text: Unknown

text: Escherichia coli

text: Escherichia coli


text: DTU National Food Institute

text: public

text: Denmark

characteristic: geographic location (country and/or sea)

text: not applicable

text: not applicable

text: Unknown

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: DTU National Food Institute

text: public

text: Denmark

text: not applicable

text: not applicable

text: Unknown

text: Pseudomonas aeruginosa

text: Pseudomonas aeruginosa


E-MTAB-13964:Sample 1

text: Vanderbilt University

text: public

text: E-MTAB-13964:Sample 1

unit: month

characteristic: age

text: ArrayExpress

characteristic: broker name

text: not collected

text: house mouse

text: Protocols: Mice were perfused with heparinized (10U/ml) DPBS and a single cell suspension of the brain was prepared using the adult brain dissociation kit. Cd11b positive and negative cells were isolated via MACS with Cd11b-coated microbeads according to the manufacturer's instructions. After two washes with cell suspension buffer, cells were counted on a hemocytometer and diluted to target 2000 (Cd11b+) or 20,000 (Cd11b-) cells for encapsulation. Cells were encapsulated using the PIPseq method, v3 chemistry. The PIPseq manufacturer's guide was then followed for nucleic acid extraction. The PIPseq manufacturer's guide was then followed for library preparation.

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: Sample 1


E-MTAB-13964:Sample 10

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Vanderbilt University

text: public

text: E-MTAB-13964:Sample 10

characteristic: Submitter Id

text: ArrayExpress

text: not collected

characteristic: collection date

text: house mouse

text: adult

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: Mus musculus

text: male

text: Sample 10

characteristic: title


E-MTAB-13964:Sample 11

text: Vanderbilt University

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: E-MTAB-13964:Sample 11

text: ArrayExpress

text: not collected

text: house mouse

characteristic: description

text: adult

text: wild type genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: male

text: Sample 11


E-MTAB-13964:Sample 12

text: Vanderbilt University

text: public

characteristic: SRA accession

text: E-MTAB-13964:Sample 12

characteristic: age

text: ArrayExpress

text: not collected

text: house mouse

characteristic: common name

text: adult

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: male

text: Sample 12


E-MTAB-13964:Sample 2

text: Vanderbilt University

text: public

text: E-MTAB-13964:Sample 2

text: ArrayExpress

characteristic: broker name

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

text: Mus musculus

text: male

text: Sample 2


E-MTAB-13964:Sample 3

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Vanderbilt University

text: public

text: E-MTAB-13964:Sample 3

text: ArrayExpress

text: not collected

text: house mouse

text: adult

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: Sample 3


E-MTAB-13964:Sample 4

text: Vanderbilt University

text: public

text: E-MTAB-13964:Sample 4

characteristic: Submitter Id

text: ArrayExpress

text: not collected

characteristic: collection date

text: house mouse

text: adult

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: Mus musculus

text: male

text: Sample 4

characteristic: title


E-MTAB-13964:Sample 5

text: Vanderbilt University

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: E-MTAB-13964:Sample 5

text: ArrayExpress

text: not collected

text: house mouse

characteristic: description

text: adult

text: wild type genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: male

text: Sample 5


E-MTAB-13964:Sample 6

text: Vanderbilt University

text: public

characteristic: SRA accession

text: E-MTAB-13964:Sample 6

characteristic: age

text: ArrayExpress

text: not collected

text: house mouse

characteristic: common name

text: adult

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: male

text: Sample 6


E-MTAB-13964:Sample 7

text: Vanderbilt University

text: public

text: E-MTAB-13964:Sample 7

text: ArrayExpress

characteristic: broker name

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

text: Mus musculus

text: male

text: Sample 7


E-MTAB-13964:Sample 8

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Vanderbilt University

text: public

text: E-MTAB-13964:Sample 8

text: ArrayExpress

text: not collected

text: house mouse

text: adult

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: Sample 8


E-MTAB-13964:Sample 9

text: Vanderbilt University

text: public

text: E-MTAB-13964:Sample 9

characteristic: Submitter Id

text: ArrayExpress

text: not collected

characteristic: collection date

text: house mouse

text: adult

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: Mus musculus

text: male

text: Sample 9

characteristic: title


text: Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: 143793:41276b68-b61e-46fd-8433-e9290a309aad

text: marine biome [ENVO:00000447]

characteristic: broad-scale environmental context

text: GFBIO

characteristic: depth

text: 18S meta-barcoding Sediment_Traps 200120062012

characteristic: description

characteristic: elevation

text: Particulate Organic Matter [ENVO:04000012]

characteristic: environmental medium

text: water

characteristic: environmental package

text: Arctic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Fram Strait

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: microbial community [PCO:1000004]

characteristic: local environmental context

text: marine metagenome

characteristic: project name

text: marine metagenome

text: Illumina MiSeq

characteristic: sequencing method

text: true

characteristic: submitted to insdc

text: water

characteristic: water environmental package


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: SRA accession

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