caucasian dwarf goby

status: PUBLIC

characteristic: ENA first public

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: caucasian dwarf goby

tag: Namespace:University of Cologne, Biocenter, Institute of Zoology

characteristic: Submitter Id

text: Jost Borcherding

text: University of Cologne, Institute of Zoology

characteristic: collecting institution

characteristic: collection date

text: Genome of Knipowitschia cf. caucasica

characteristic: description

text: Germany

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Rhine back water channel Bislich-Vahnum (North-Rhine Westphalia, Germany)

characteristic: geographic location (region and locality)

text: freshwater

characteristic: habitat

text: Jost Borcherding

text: Knipowitschia caucasica

characteristic: organism

text: ERGA?

characteristic: project name

text: Knipowitschia caucasica

text: Genome of Knipowitschia cf. caucasica

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: University of Sussex

text: public

tag: Namespace:University of Sussex

text: Microglia

text: house mouse

characteristic: common name

text: Extracellular microRNA

text: United Kingdom

text: Mus musculus

text: Mus musculus

text: Male

characteristic: sex

characteristic: strain

text: Brain


text: University of Sussex

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Microglia

text: house mouse

text: Extracellular microRNA

text: United Kingdom

text: Mus musculus

text: Mus musculus

text: Female

text: Brain


text: University of Sussex

text: public

text: Microglia

text: house mouse

text: Extracellular microRNA

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Mus musculus

text: Mus musculus

text: Male

text: TDP-43-WT BAC knock-in

text: Brain


text: University of Sussex

text: public

text: Microglia

text: house mouse

text: Extracellular microRNA

text: United Kingdom

text: Mus musculus

text: Mus musculus

text: Female

text: TDP-43-WT BAC knock-in

text: Brain


text: University of Sussex

text: public

text: Microglia

text: house mouse

text: Extracellular microRNA

text: United Kingdom

text: Mus musculus

text: Mus musculus

text: Male

text: TDP-43-M337V BAC knock-in

text: Brain


text: University of Sussex

text: public

text: Microglia

text: house mouse

text: Extracellular microRNA

text: United Kingdom

text: Mus musculus

text: Mus musculus

text: Female

text: TDP-43-M337V BAC knock-in

text: Brain


text: EMBL

text: public

characteristic: collection date

text: house mouse

text: C57BL/6 mTEC WT

text: Portugal

text: Mus musculus

text: Mus musculus


text: EMBL

text: public

text: house mouse

text: C57BL/6 mTEC cKO Foxo3

text: Portugal

text: Mus musculus

characteristic: organism

text: Mus musculus


text: EMBL

text: public

text: house mouse

text: C57BL/6 cTEC WT

text: Portugal

text: Mus musculus

text: Mus musculus


text: EMBL

text: public

text: house mouse

text: C57BL/6 cTEC cKO Foxo3

text: Portugal

text: Mus musculus

text: Mus musculus


H03 - Pre blood w0

text: KI

text: public

text: H03 - Pre blood w0

text: Rhesus monkey

text: Pre immunization blood sample (week 0)

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: F

text: PBMC

text: H03 - Pre blood w0


I10 - Pre blood w0

text: KI

text: public

text: I10 - Pre blood w0

text: Rhesus monkey

text: Pre immunization blood sample (week 0)

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: M

text: PBMC

text: I10 - Pre blood w0


H03 - Post 1 blood w2

text: KI

text: public

text: H03 - Post 1 blood w2

text: Rhesus monkey

text: Post 1 immunization blood sample (week 2)

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: F

text: PBMC

text: H03 - Post 1 blood w2


I10 - Post 1 blood w2

text: KI

text: public

text: I10 - Post 1 blood w2

text: Rhesus monkey

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: M

text: PBMC

text: I10 - Post 1 blood w2


H03 - Post 2 blood w6

text: KI

text: public

text: H03 - Post 2 blood w6

text: Rhesus monkey

text: Post 2 immunization blood sample (week 6)

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: F

text: PBMC

text: H03 - Post 2 blood w6


I10 - Post 2 blood w6

text: KI

text: public

text: I10 - Post 2 blood w6

text: Rhesus monkey

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: M

text: PBMC

text: I10 - Post 2 blood w6


H03 - Post 2 iLN w6

text: KI

text: public

text: H03 - Post 2 iLN w6

text: Rhesus monkey

text: Post 2 immunization inguinal draining lymph node sample (week 6)

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: F

text: lymph node

text: H03 - Post 2 iLN w6


I10 - Post 2 iLN w6

text: KI

text: public

text: I10 - Post 2 iLN w6

text: Rhesus monkey

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: M

text: lymph node

text: I10 - Post 2 iLN w6


H03 - Post 2 BM w6

text: KI

text: public

text: H03 - Post 2 BM w6

text: Rhesus monkey

text: Post 2 immunization humerus aspirate bone marrow sample (week 6)

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: F

text: bone marrow

text: H03 - Post 2 BM w6


I10 - Post 2 BM w6

text: KI

text: public

text: I10 - Post 2 BM w6

text: Rhesus monkey

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: M

text: bone marrow

text: I10 - Post 2 BM w6


H03 - Post 3 blood w11

text: KI

text: public

text: H03 - Post 3 blood w11

text: Rhesus monkey

text: Post 3 immunization blood sample (week 11)

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: F

text: PBMC

text: H03 - Post 3 blood w11


I10 - Post 3 blood w11

text: KI

text: public

text: I10 - Post 3 blood w11

text: Rhesus monkey

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: M

text: PBMC

text: I10 - Post 3 blood w11


H03 - Post 3 iLN w11

text: KI

text: public

text: H03 - Post 3 iLN w11

text: Rhesus monkey

text: Post 3 immunization inguinal draining lymph node sample (week 11)

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: F

text: lymph node

text: H03 - Post 3 iLN w11


I10 - Post 3 iLN w11

text: KI

text: public

text: I10 - Post 3 iLN w11

text: Rhesus monkey

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: M

text: lymph node

text: I10 - Post 3 iLN w11


H03 - Post 3 BM w11

text: KI

text: public

text: H03 - Post 3 BM w11

text: Rhesus monkey

text: Post 3 immunization humerus aspirate bone marrow sample (week 11)

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: F

text: bone marrow

text: H03 - Post 3 BM w11


I10 - Post 3 BM w11

text: KI

text: public

text: I10 - Post 3 BM w11

text: Rhesus monkey

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: M

text: bone marrow

text: I10 - Post 3 BM w11


H03 - Post 3 blood w19

text: KI

text: public

text: H03 - Post 3 blood w19

text: Rhesus monkey

text: Post 3 immunization blood sample (week 19)

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: F

text: PBMC

text: H03 - Post 3 blood w19


I10 - Post 3 blood w19

text: KI

text: public

text: I10 - Post 3 blood w19

text: Rhesus monkey

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: M

text: PBMC

text: I10 - Post 3 blood w19


H03 - Post 3 blood w23

text: KI

text: public

text: H03 - Post 3 blood w23

text: Rhesus monkey

text: Post 3 immunization blood sample (week 23)

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: F

text: PBMC

text: H03 - Post 3 blood w23


I10 - Post 3 blood w23

text: KI

text: public

text: I10 - Post 3 blood w23

text: Rhesus monkey

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: M

text: PBMC

text: I10 - Post 3 blood w23


H03 - Post 3 blood w27

text: KI

text: public

text: H03 - Post 3 blood w27

text: Rhesus monkey

text: Post 3 immunization blood sample (week 27)

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: F

text: PBMC

text: H03 - Post 3 blood w27


I10 - Post 3 blood w27

text: KI

text: public

text: I10 - Post 3 blood w27

text: Rhesus monkey

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: M

text: PBMC

text: I10 - Post 3 blood w27


H03 - Post 4 BM w32

text: KI

text: public

text: H03 - Post 4 BM w32

text: Rhesus monkey

text: Post 4 immunization femur wash bone marrow sample (week 32)

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: F

text: bone marrow

text: H03 - Post 4 BM w32


H03 - Post 4 spleen w32

text: KI

text: public

text: H03 - Post 4 spleen w32

text: Rhesus monkey

text: Post 4 immunization spleen sample (week 32)

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: F

text: spleen

text: H03 - Post 4 spleen w32


H03 - Post 4 axLN w32

text: KI

text: public

text: H03 - Post 4 axLN w32

text: Rhesus monkey

text: Post 4 immunization axillary lymph node sample (week 32)

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: F

text: lymph node

text: H03 - Post 4 axLN w32


H03 - Post 4 mesLN w32

text: KI

text: public

text: H03 - Post 4 mesLN w32

text: Rhesus monkey

text: Post 4 immunization mesentheric lymph node sample (week 32)

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: F

text: lymph node

text: H03 - Post 4 mesLN w32


H03 - Post 4 perLN w32

text: KI

text: public

text: H03 - Post 4 perLN w32

text: Rhesus monkey

text: Post 4 immunization periaortic lymph node sample (week 32)

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: F

text: lymph node

text: H03 - Post 4 perLN w32


I10 - Post 4 blood w46

text: KI

text: public

text: I10 - Post 4 blood w46

text: Rhesus monkey

text: Post 4 immunization blood sample (week 46)

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: M

text: PBMC

text: I10 - Post 4 blood w46


I10 - Post 4 BM w46

text: KI

text: public

text: I10 - Post 4 BM w46

text: Rhesus monkey

text: Post 4 immunization femur wash bone marrow sample (week 46)

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: M

text: bone marrow

text: I10 - Post 4 BM w46


I10 - Post 4 spleen w46

text: KI

text: public

text: I10 - Post 4 spleen w46

text: Rhesus monkey

text: Post 4 immunization spleen sample (week 46)

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: M

text: spleen

text: I10 - Post 4 spleen w46


I10 - Post 4 iLN-L w46

text: KI

text: public

text: I10 - Post 4 iLN-L w46

text: Rhesus monkey

text: Post 4 immunization inguinal draining lymph node (left side) sample (week 46)

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: M

text: lymph node

text: I10 - Post 4 iLN-L w46


I10 - Post 4 iLN-R w46

text: KI

text: public

text: I10 - Post 4 iLN-R w46

text: Rhesus monkey

text: Post 4 immunization inguinal draining lymph node (right side) sample (week 46)

text: Sweden

text: Macaca mulatta

text: Macaca mulatta

text: M

text: lymph node

text: I10 - Post 4 iLN-R w46


E-MTAB-13797:control_1-Cre neg_1

text: University of Veterinary Medicine, Vienna, Austria

text: public

text: E-MTAB-13797:control_1-Cre neg_1

unit: day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: not collected

text: house mouse

text: Protocols: Frozen liver samples from aged non-diseased Cre neg (n=3), GFPNK/NK (n=2), STAT5BNK/NK (n=3) and N642HNK/NK (n=5) mice and from diseased N642HNK/NK mice (n=8) were thawed and (GFP+)CD3-NK1.1+ NK cells were directly sorted into a SMARTSeq lysis buffer with a CytoFlex SRT Sorter (Beckman Coulter).  This was part of the library construction protocol. Libraries were constructed using the SMART-SEQ3 method (Michael Hagemann-Jensen, et al.; Nat Biotechnol. 2020 Jun;38(6):708-714).

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: liver

characteristic: organism part

text: Mus musculus

text: female

text: control_1-Cre neg_1


E-MTAB-13797:control_2-Cre neg_2

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: E-MTAB-13797:control_2-Cre neg_2

text: ArrayExpress

text: not collected

text: house mouse

characteristic: common name

text: adult

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: liver

text: Mus musculus

text: female

characteristic: sex

text: control_2-Cre neg_2

characteristic: title


E-MTAB-13797:control_3-Cre neg_3

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13797:control_3-Cre neg_3

text: ArrayExpress

text: not collected

text: house mouse

text: adult

text: wild type genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: liver

text: Mus musculus

text: female

characteristic: strain

text: control_3-Cre neg_3


text: public

characteristic: Submitter Id

text: ArrayExpress

text: not collected

characteristic: collection date

text: house mouse

characteristic: description

text: adult

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

text: Mus musculus

text: liver

text: Mus musculus

text: female


text: public

characteristic: age

text: ArrayExpress

characteristic: broker name

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: not collected

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: liver

text: Mus musculus

text: female


characteristic: ENA first public

text: public

text: ArrayExpress

text: not collected

text: house mouse

text: adult

text: GFPNK/NK

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: liver

characteristic: organism part

text: Mus musculus

text: female


characteristic: ENA-CHECKLIST

text: SciLifeLab

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: NOT APPLICABLE

text: COPO

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

characteristic: collecting institution

characteristic: collector ORCID ID

text: Greece

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Thessaly | Larissa | Elassona | Melissotrypa Cave

characteristic: geographic location (region and locality)

text: cave system

characteristic: habitat

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

text: adult

characteristic: lifestage

text: Niphargus gammariformis

text: WHOLE ORGANISM

text: ERGA

characteristic: project name

text: Caught with a pipette

characteristic: sample collection method

text: SERBAN M. SARBU

characteristic: sample coordinator

characteristic: sample coordinator ORCID ID

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

characteristic: sample coordinator affiliation

characteristic: sample same as

text: Niphargus gammariformis

text: NOT COLLECTED

characteristic: sex

text: ERGA SS 7193 00016

text: 2eef7662-ff7f-413f-986c-cd6530581e90-ERGA-specimen

characteristic: title

characteristic: tolid


characteristic: ENA-CHECKLIST

text: SciLifeLab

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: SRA accession

characteristic: Submitter Id

text: NOT APPLICABLE

text: COPO

characteristic: broker name

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

characteristic: collection date

text: Greece

characteristic: geographic location (country and/or sea)

text: cave system

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

text: adult

text: Niphargus gammariformis

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ERGA

text: Caught with a pipette

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

text: Niphargus gammariformis

text: NOT COLLECTED

text: ERGA SS 7193 00015

text: 9e2b327a-9eee-460a-81a6-2fceb2bf29d0-ERGA-specimen


text: SciLifeLab

text: NOT PROVIDED

text: EarlhamInstitute

text: NOT APPLICABLE

text: COPO

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

characteristic: collecting institution

characteristic: collector ORCID ID

text: Greece

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: cave system

characteristic: habitat

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

text: adult

characteristic: lifestage

text: Niphargus gammariformis

text: WHOLE ORGANISM

text: ERGA

characteristic: project name

text: Caught with a pipette

characteristic: sample collection method

text: SERBAN M. SARBU

characteristic: sample coordinator

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

text: Niphargus gammariformis

text: NOT COLLECTED

text: ERGA SS 7193 00014

text: b24645fd-7401-497e-803a-857aad9c48aa-ERGA-specimen


characteristic: ENA-CHECKLIST

text: SciLifeLab

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: SRA accession

text: NOT APPLICABLE

text: COPO

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

text: Greece

text: cave system

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

text: adult

text: Niphargus gammariformis

text: WHOLE ORGANISM

text: ERGA

text: Caught with a pipette

text: SERBAN M. SARBU

characteristic: sample coordinator ORCID ID

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

characteristic: sample coordinator affiliation

characteristic: sample same as

text: Niphargus gammariformis

text: NOT COLLECTED

characteristic: sex

text: ERGA SS 7193 00013

text: d0eaf942-f1c2-4103-9a7a-40a3ff763c05-ERGA-specimen

characteristic: title

characteristic: tolid


text: SciLifeLab

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: Submitter Id

text: NOT APPLICABLE

text: COPO

characteristic: broker name

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

characteristic: collecting institution

characteristic: collection date

characteristic: collector ORCID ID

text: Greece

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: cave system

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

text: adult

text: Niphargus gammariformis

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ERGA

text: Caught with a pipette

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

text: Niphargus gammariformis

text: NOT COLLECTED

text: ERGA SS 7193 00012

text: 9d34282c-e631-4bee-a222-5ab72f098520-ERGA-specimen


characteristic: ENA-CHECKLIST

text: SciLifeLab

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: SRA accession

text: NOT APPLICABLE

text: COPO

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

text: Greece

characteristic: geographic location (region and locality)

text: cave system

characteristic: habitat

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

text: adult

characteristic: lifestage

text: Niphargus gammariformis

text: WHOLE ORGANISM

text: ERGA

characteristic: project name

text: Caught with a pipette

characteristic: sample collection method

text: SERBAN M. SARBU

characteristic: sample coordinator

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

text: Niphargus gammariformis

text: NOT COLLECTED

text: ERGA SS 7193 00011

text: 412ba6c3-502b-4ae2-b738-885671a08889-ERGA-specimen


text: SciLifeLab

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: Submitter Id

text: NOT APPLICABLE

text: COPO

characteristic: broker name

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

characteristic: collecting institution

characteristic: collection date

text: Greece

text: cave system

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

text: adult

text: Niphargus gammariformis

text: WHOLE ORGANISM

text: ERGA

text: Caught with a pipette

text: SERBAN M. SARBU

characteristic: sample coordinator ORCID ID

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

characteristic: sample coordinator affiliation

characteristic: sample same as

text: Niphargus gammariformis

text: NOT COLLECTED

characteristic: sex

text: ERGA SS 7193 00010

text: bfcedf2c-d651-4356-9b00-b6f71e1bc7ce-ERGA-specimen

characteristic: title

characteristic: tolid


characteristic: ENA-CHECKLIST

text: SciLifeLab

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: SRA accession

text: NOT APPLICABLE

text: COPO

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

characteristic: collector ORCID ID

text: Greece

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: cave system

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

text: adult

text: Niphargus gammariformis

characteristic: organism

text: WHOLE ORGANISM

characteristic: organism part

text: ERGA

text: Caught with a pipette

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

text: Niphargus gammariformis

text: NOT COLLECTED

text: ERGA SS 7193 00009

text: dbfd5e18-290b-49e4-b6f6-315043535a43-ERGA-specimen


text: SciLifeLab

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: Submitter Id

text: NOT APPLICABLE

text: COPO

characteristic: broker name

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

characteristic: collecting institution

characteristic: collection date

text: Greece

characteristic: geographic location (region and locality)

text: cave system

characteristic: habitat

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

text: adult

characteristic: lifestage

text: Niphargus gammariformis

text: WHOLE ORGANISM

text: ERGA

characteristic: project name

text: Caught with a pipette

characteristic: sample collection method

text: SERBAN M. SARBU

characteristic: sample coordinator

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

text: Niphargus gammariformis

text: NOT COLLECTED

text: ERGA SS 7193 00008

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text: Caught with a pipette

characteristic: sample collection method

text: SERBAN M. SARBU

characteristic: sample coordinator

characteristic: sample coordinator ORCID ID

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

text: Niphargus gammariformis

text: NOT COLLECTED

text: ERGA SS 7193 00002

text: NOT PROVIDED

text: 40f09ce1-5d28-4d57-ae67-9dcc8a30fb20-erga


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: SciLifeLab

text: SSarbu 15966 001

text: EarlhamInstitute

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOT APPLICABLE

text: COPO

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

text: Greece

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: cave system

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

text: adult

text: Niphargus gammariformis

text: WHOLE ORGANISM

text: ERGA

text: Caught with a pipette

text: SERBAN M. SARBU

text: EMIL RACOVITA INSTITUTE OF SPELEOLOGY

characteristic: sample coordinator affiliation

characteristic: sample same as

text: Niphargus gammariformis

text: NOT COLLECTED

characteristic: sex

text: ERGA SS 7193 00001

text: NOT PROVIDED

text: 701b928c-f7b4-406d-b029-cf8e2a480d8e-erga

characteristic: tolid


status: PRIVATE

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: THE ROSLIN INSTITUTE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Bos taurus

characteristic: Organism

tag: Namespace:THE ROSLIN INSTITUTE

text: not provided

text: Cattle

characteristic: common name

text: Nigeria

text: Bos taurus

characteristic: organism

text: Bos taurus

characteristic: scientific name

text: Bos taurus

text: N'Dama cattle

characteristic: title

type: derived from

Livestock Genetics

Address: International Livestock Research Institute (ILRI) Addis Ababa, Ethiopia

Abdulfatai Tijjani

FirstName: Abdulfatai

LastName: Tijjani


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY

characteristic: Submitter Id

text: SPAdes

characteristic: assembly software

text: default

characteristic: binning parameters

text: DASTool, MaxBin

characteristic: binning software

text: SOX

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: contigs

characteristic: contamination screening input

text: This sample represents a metagenomic bin from the metagenomic sample ERS4359960

characteristic: description

characteristic: environment (biome)

text: Bathymodiolus-dominated oceanic mussel reef [ENVO:01001385], Bathymodiolus-dominated oceanic mussel bed [ENVO:01001390], marine hydrothermal vent [ENVO:01000122]

characteristic: environment (feature)

text: Bathymodiolus gill tissue material [ENVO:01001393]

characteristic: environment (material)

text: Atlantic Ocean

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Bathymodiolus gill tissue

text: symbiont metagenome

characteristic: metagenomic source

text: Bathymodiolus puteoserpentis thioautotrophic gill symbiont

text: Bathymodiolus PopGen MAR

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq3000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: THE ROSLIN INSTITUTE

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: zebu cattle

characteristic: common name

text: Uganda

characteristic: geographic location (country and/or sea)

text: Bos indicus

characteristic: organism

text: Bos indicus

text: Ankole cattle

characteristic: title


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:334-20686

text: A.Yu. Astashenkov

text: intergenic spacer trnH-pbA

characteristic: description

text: Russia

text: Tuva, Kyzyl

characteristic: geographic location (region and locality)

text: TKY

characteristic: isolate

text: Iris potaninii

text: Iris potaninii

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:334-20687

text: A.Yu. Astashenkov

text: intergenic spacer rps4-trnS-GGA

text: Russia

text: Tuva, Kyzyl

text: TKY

text: Iris potaninii

text: Iris potaninii

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:334-20688

text: A.Yu. Astashenkov

text: intergenic spacer trnS-GCU-trnG-UCC

text: Russia

text: Tuva, Kyzyl

text: TKY

text: Iris potaninii

text: Iris potaninii

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:334-20689

text: A.Yu. Astashenkov

text: intergenic spacer trnL-trnF

text: Russia

text: Tuva, Kyzyl

text: TKY

text: Iris potaninii

text: Iris potaninii

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:334-20690

text: A. Naumenko

text: intergenic spacer trnH-pbA

text: Kyrgyzstan

text: Issyk-Kul Region, Terskey Ala-Too Mountain Range

text: KIT

text: Iris bloudowii

text: Iris bloudowii

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:334-20691

text: A. Naumenko

text: intergenic spacer rps4-trnS-GGA

text: Kyrgyzstan

text: KIT

text: Iris bloudowii

text: Iris bloudowii

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:334-20692

text: A. Naumenko

text: intergenic spacer trnS-GCU-trnG-UCC

text: Kyrgyzstan

text: KIT

text: Iris bloudowii

text: Iris bloudowii

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:334-20693

text: A. Naumenko

text: intergenic spacer trnL-trnF

text: Kyrgyzstan

text: KIT

text: Iris bloudowii

text: Iris bloudowii

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:334-20694

text: S.L. Zygalova et al.

text: intergenic spacer trnH-pbA

text: Ukraine

text: Poltava Oblast, near Deimanivka

text: UPO

text: Iris humilis

text: Iris humilis

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:335-20695

text: S.L. Zygalova et al.

text: intergenic spacer rps4-trnS-GGA

text: Ukraine

text: Poltava Oblast, near Deimanivka

text: UPO

text: Iris humilis

text: Iris humilis

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:335-20696

text: S.L. Zygalova et al.

text: intergenic spacer trnS-GCU-trnG-UCC

text: Ukraine

text: Poltava Oblast, near Deimanivka

text: UPO

text: Iris humilis

text: Iris humilis

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:335-20697

text: S.L. Zygalova et al.

text: intergenic spacer trnL-trnF

text: Ukraine

text: Poltava Oblast, near Deimanivka

text: UPO

text: Iris humilis

text: Iris humilis

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:335-20698

text: E.V. Boltenkov

text: intergenic spacer trnH-pbA

text: Russia

text: Primorsky Krai, near Nakhodka

text: GSM

text: Iris mandshurica

text: Iris mandshurica

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:335-20699

text: E.V. Boltenkov

text: intergenic spacer rps4-trnS-GGA

text: Russia

text: Primorsky Krai, near Nakhodka

text: GSM

text: Iris mandshurica

text: Iris mandshurica

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:335-20700

text: E.V. Boltenkov

text: intergenic spacer trnS-GCU-trnG-UCC

text: Russia

text: Primorsky Krai, near Nakhodka

text: GSM

text: Iris mandshurica

text: Iris mandshurica

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:335-20701

text: E.V. Boltenkov

text: intergenic spacer trnL-trnF

text: Russia

text: Primorsky Krai, near Nakhodka

text: GSM

text: Iris mandshurica

text: Iris mandshurica

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:335-20702

text: E.A. Chubar

text: intergenic spacer trnH-pbA

text: Russia

text: Primorsky Krai, Khankaysky District, Pemzovaya Bay

text: KBP

text: Iris vorobievii

text: Iris vorobievii

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:335-20703

text: E.A. Chubar

text: intergenic spacer rps4-trnS-GGA

text: Russia

text: KBP

text: Iris vorobievii

text: Iris vorobievii

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:335-20704

text: E.A. Chubar

text: intergenic spacer trnS-GCU-trnG-UCC

text: Russia

text: KBP

text: Iris vorobievii

text: Iris vorobievii

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:335-20705

text: E.A. Chubar

text: intergenic spacer trnL-trnF

text: Russia

text: KBP

text: Iris vorobievii

text: Iris vorobievii

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:335-20706

text: E.V. Boltenkov

text: intergenic spacer trnH-pbA

text: Russia

text: Altai Republic, Ust-Kansky District, Vladimirovka

text: ACR

text: Iris tigridia

text: Iris tigridia

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:335-20707

text: E.V. Boltenkov

text: intergenic spacer rps4-trnS-GGA

text: Russia

text: ACR

text: Iris tigridia

text: Iris tigridia

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:335-20708

text: E.V. Boltenkov

text: intergenic spacer trnS-GCU-trnG-UCC

text: Russia

text: ACR

text: Iris tigridia

text: Iris tigridia

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:335-20709

text: E.V. Boltenkov

text: intergenic spacer trnL-trnF

text: Russia

text: ACR

text: Iris tigridia

text: Iris tigridia

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:335-20710

text: T.G. Elumeeva

text: intergenic spacer trnH-pbA

text: China

text: Sichuan, Songpang County

text: CSS

text: Iris goniocarpa

text: Iris goniocarpa

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:336-20711

text: T.G. Elumeeva

text: intergenic spacer rps4-trnS-GGA

text: China

text: Sichuan, Songpang County

text: CSS

text: Iris goniocarpa

text: Iris goniocarpa

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:336-20712

text: T.G. Elumeeva

text: intergenic spacer trnS-GCU-trnG-UCC

text: China

text: Sichuan, Songpang County

text: CSS

text: Iris goniocarpa

text: Iris goniocarpa

text: plastid:chloroplast


text: Artyukova

text: public

text: ena-SAMPLE-TAB-02-05-2022-09:47:32:336-20713

text: T.G. Elumeeva

text: intergenic spacer trnL-trnF

text: China

text: Sichuan, Songpang County

text: CSS

text: Iris goniocarpa

text: Iris goniocarpa

text: plastid:chloroplast


text: Central South University

text: public

tag: Namespace:Central South University

text: human

text: Homo sapiens

text: Homo sapiens


text: public

tag: Namespace:BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: MEGAHIT; kmer set 29,49,69,89,109,119,129,149

characteristic: assembly software

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Patescibacteria assembled from Lake Ikeda

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Japan

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Patescibacteria group bacterium

characteristic: project name

characteristic: sample derived from

text: Patescibacteria group bacterium

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Patescibacteria assembled from Rimov Reservoir

characteristic: description

text: freshwater lake

text: reservoir

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: uncultured Candidatus Saccharimonas sp.

characteristic: organism

text: uncultured Candidatus Saccharimonas sp.

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: EBI

text: public

text: cattle

characteristic: common name

text: Bos taurus

characteristic: same as

text: Bos taurus

text: BE063773398-1 analysis SAMEA8132954-Adrenal-gland-cortex-BE063773398_processedReads proxy sample submission

characteristic: title


characteristic: ENA first public

text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-2 analysis SAMEA8132955-Cerebellum-BE063773398_processedReads proxy sample submission


characteristic: ENA-CHECKLIST

text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-3 analysis SAMEA8132956-Cerebrum-cortex-BE063773398_processedReads proxy sample submission


characteristic: External Id

text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-4 analysis SAMEA8132957-Colon-BE063773398_processedReads proxy sample submission


text: EBI

characteristic: INSDC center name

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-5 analysis SAMEA8132958-Duodenum-BE063773398_processedReads proxy sample submission


text: EBI

characteristic: INSDC last update

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-6 analysis SAMEA8132959-Heart-BE063773398_processedReads proxy sample submission


text: EBI

text: public

characteristic: INSDC status

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-7 analysis SAMEA8132960-Hypothalamus-BE063773398_processedReads proxy sample submission


text: EBI

text: public

characteristic: SRA accession

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-8 analysis SAMEA8132961-Ileum-BE063773398_processedReads proxy sample submission


text: EBI

text: public

characteristic: Submitter Id

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-9 analysis SAMEA8132962-Jejunum-BE063773398_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-10 analysis SAMEA8132963-Kidney-BE063773398_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-11 analysis SAMEA8132964-Liver-BE063773398_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-12 analysis SAMEA8132965-Lung-BE063773398_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-13 analysis SAMEA8132966-Lymph-node-BE063773398_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-16 analysis SAMEA8132967-Pancreas-BE063773398_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-17 analysis SAMEA8132968-Pituitarygland-BE063773398_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-18 analysis SAMEA8132969-Rumen-BE063773398_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-19 analysis SAMEA8132970-Skeletal-muscle-BE063773398_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-20 analysis SAMEA8132971-Spleen-BE063773398_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-21 analysis SAMEA8132972-Subcutaneous-fat-BE063773398_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-22 analysis SAMEA8132973-Testis-BE063773398_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE063773398-23 analysis SAMEA8132974-Thyroid-gland-BE063773398_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-25 analysis SAMEA8132975-Adrenal-gland-BE714385429_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-26 analysis SAMEA8132976-Cerebellum-BE714385429_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-27 analysis SAMEA8132977-Cerebrum-cortex-BE714385429_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-28 analysis SAMEA8132978-Colon-BE714385429_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-29 analysis SAMEA8132979-Duodenum-BE714385429_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-30 analysis SAMEA8132980-Heart-BE714385429_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-31 analysis SAMEA8132981-Hypothalamus-BE714385429_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-32 analysis SAMEA8132982-Ileum-BE714385429_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-33 analysis SAMEA8132983-Jujenum-BE714385429_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-34 analysis SAMEA8132984-Kidney-BE714385429_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-35 analysis SAMEA8132985-Liver-BE714385429_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-36 analysis SAMEA8132986-Lung-BE714385429_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-37 analysis SAMEA8132987-Lymph-node-BE714385429_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-38 analysis SAMEA8132988-Mammary-gland-BE714385429_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-39 analysis SAMEA8132989-Ovary-BE714385429_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-40 analysis SAMEA8132990-Pancreas-BE714385429_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-41 analysis SAMEA8132991-Pituitary-gland-BE714385429_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-42 analysis SAMEA8132992-Rumen-BE714385429_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-43 analysis SAMEA8132993-Skeletal-muscle-BE714385429_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-44 analysis SAMEA8132994-Spleen-BE714385429_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-45 analysis SAMEA8132995-Subcutaneous-fat-BE714385429_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-47 analysis SAMEA8132996-Thyroid-gland-BE714385429_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: BE714385429-48 analysis SAMEA8132997-Uterus-BE714385429_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-02 analysis SAMEA8132999-Cerebellum-CA-154_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-03 analysis SAMEA8133000-Cortex-CA-154_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-04 analysis SAMEA8133001-Colon-CA-154_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-05 analysis SAMEA8133002-Duodenum-CA-154_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-06 analysis SAMEA8133003-Heart-CA-154_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-08 analysis SAMEA8133004-Ileum-CA-154_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-09 analysis SAMEA8133005-Jejunum-CA-154_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-10 analysis SAMEA8133006-Kidney-CA-154_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-11 analysis SAMEA8133007-Liver-CA-154_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-12 analysis SAMEA8133008-Lung-CA-154_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-13 analysis SAMEA8133009-TB-Lymph-CA-154_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-14 analysis SAMEA8133010-Mammary-gland-CA-154_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-15 analysis SAMEA8133011-Ovary-CA-154_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-17 analysis SAMEA8133013-Pituitary-CA-154_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-18 analysis SAMEA8133014-Rumen-CA-154_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-19 analysis SAMEA8133015-Skeletal-muscle-CA-154_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-20 analysis SAMEA8133016-Spleen-CA-154_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-21 analysis SAMEA8133017-Subcutaneous-fat-CA-154_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-154-24 analysis SAMEA8133019-Uterine-horn-CA-154_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-01 analysis SAMEA8133020-Adrenal-gland-CA-335_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-02 analysis SAMEA8133021-Cerebellum-CA-335_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-03 analysis SAMEA8133022-Cortex-CA-335_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-04 analysis SAMEA8133023-Colon-CA-335_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-05 analysis SAMEA8133024-Duodenum-CA-335_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-06 analysis SAMEA8133025-Heart-CA-335_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-08 analysis SAMEA8133026-Ileum-CA-335_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-09 analysis SAMEA8133027-Jejunum-CA-335_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-10 analysis SAMEA8133028-Kidney-CA-335_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-11 analysis SAMEA8133029-Liver-CA-335_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-12 analysis SAMEA8133030-Lung-CA-335_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-13 analysis SAMEA8133031-TB-Lymph-CA-335_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-17 analysis SAMEA8133033-Pituitary-gland-CA-335_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-18 analysis SAMEA8133034-Rumen-CA-335_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-19 analysis SAMEA8133035-Skeletal-muscle-CA-335_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-20 analysis SAMEA8133036-Spleen-CA-335_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: CA-335-21 analysis SAMEA8133037-Subcutaneos-fat-CA-335_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-01 analysis SAMEA8133039-Adrenal-gland-DE-F_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-02 analysis SAMEA8133040-Hippocampus-DE-F_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-03 analysis SAMEA8133041-Cerebrum-cortex-DE-F_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-04 analysis SAMEA8133042-Colon-DE-F_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-05 analysis SAMEA8133043-Duodenum-DE-F_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-06 analysis SAMEA8133044-Heart-DE-F_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-08 analysis SAMEA8133046-Ileum-DE-F_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-09 analysis SAMEA8133047-Jejunum-DE-F_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-11 analysis SAMEA8133049-Liver-DE-F_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-12 analysis SAMEA8133050-Lung-DE-F_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-13 analysis SAMEA8133051-Lymph-node-DE-F_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-14 analysis SAMEA8133052-Mammary-gland-DE-F_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-15 analysis SAMEA8133053-Ovary-DE-F_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-16 analysis SAMEA8133054-Pancreas-DE-F_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-17 analysis SAMEA8133055-Pituitary-gland-DE-F_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-18 analysis SAMEA8133056-Rumen-DE-F_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-19 analysis SAMEA8133057-Skeletal-muscle-DE-F_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-20 analysis SAMEA8133058-Spleen-DE-F_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-21 analysis SAMEA8133059-Subcutaneos-fat-DE-F_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-23 analysis SAMEA8133060-Thyroid-gland-DE-F_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-F-24 analysis SAMEA8133061-Uterus-DE-F_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-01 analysis SAMEA8133062-Adrenal-gland-DE-M_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-02 analysis SAMEA8133063-Cerebellum-DE-M_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-04 analysis SAMEA8133065-Colon-DE-M_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-05 analysis SAMEA8133066-Duodenum-DE-M_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-06 analysis SAMEA8133067-Heart-DE-M_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-07 analysis SAMEA8133068-Hypothalamus-DE-M_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-08 analysis SAMEA8133069-Ileum-DE-M_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-09 analysis SAMEA8133070-Jejunum-DE-M_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-10 analysis SAMEA8133071-Kidney-DE-M_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-11 analysis SAMEA8133072-Liver-DE-M_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-12 analysis SAMEA8133073-Lung-DE-M_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-13 analysis SAMEA8133074-Lymph-node-DE-M_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-16 analysis SAMEA8133075-Pancreas-DE-M_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-17 analysis SAMEA8133076-Pituitarygland-DE-M_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-18 analysis SAMEA8133077-Rumen-DE-M_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-19 analysis SAMEA8133078-Skeletal-muscle-DE-M_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-20 analysis SAMEA8133079-Spleen-DE-M_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-21 analysis SAMEA8133080-Subcutaneous-fat-DE-M_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-22 analysis SAMEA8133081-Testis-DE-M_processedReads proxy sample submission


text: EBI

text: public

text: cattle

text: Bos taurus

text: Bos taurus

text: DE-M-23 analysis SAMEA8133082-Thyroid-gland-DE-M_processedReads proxy sample submission


text: USDA

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: USDA

text: USA:Kentucky

text: Equus caballus

characteristic: host

text: asymptomatic

text: urine

text: 37.55 N 85.21 W

text: Leptospira interrogans

characteristic: strain

text: Enrichment and sequencing of Leptospires from urine


text: USDA

text: live

text: Pathogen.cl

text: USDA

text: USA:Kentucky

text: Equus caballus

text: asymptomatic

text: urine

text: 37.55 N 85.21 W

text: Leptospira kirschneri

characteristic: organism


text: Ramani Lab, Gladstone Institute for Data Science & Biotechnology, Gladstone Institutes / UCSF

text: live

text: Generic

text: mouse embryonic stem cell E14

characteristic: cell line

text: mouse embryonic stem cell

characteristic: cell type

text: missing

text: missing

text: Mus musculus

text: mouse embryonic stem cell E14

text: mESC E14, nuclei, m6dA methylated, ex situ SAMOSA-Tag

text: m6dA methylated

characteristic: treatment