status: PUBLIC

characteristic: ENA first public

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Copenhagen Univeristy

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-20-09-2023-09:25:11:259-59315

tag: Namespace:Copenhagen Univeristy

characteristic: Submitter Id

text: missing: data agreement established pre-2023

characteristic: collection date

text: giraffe

characteristic: common name

text: Southern African�giraffe DNA sample

characteristic: description

text: Zimbabwe

characteristic: geographic location (country and/or sea)

text: Giraffa camelopardalis

characteristic: organism

text: Giraffa camelopardalis

characteristic: title


text: Copenhagen Univeristy

text: public

text: ena-SAMPLE-TAB-20-09-2023-09:25:11:259-59316

text: giraffe

text: Southern African�giraffe DNA sample

text: Zimbabwe

text: Giraffa camelopardalis

text: Giraffa camelopardalis


text: Copenhagen Univeristy

text: public

text: ena-SAMPLE-TAB-20-09-2023-09:25:11:259-59318

text: giraffe

text: Southern African�giraffe DNA sample

text: Zimbabwe

text: Giraffa camelopardalis

text: Giraffa camelopardalis


text: Copenhagen Univeristy

text: public

text: ena-SAMPLE-TAB-20-09-2023-09:25:11:260-59321

text: giraffe

text: Southern African�giraffe DNA sample

text: Zimbabwe

text: Giraffa camelopardalis

text: Giraffa camelopardalis


text: Copenhagen Univeristy

text: public

text: ena-SAMPLE-TAB-20-09-2023-09:25:11:260-59323

text: giraffe

text: Southern African�giraffe DNA sample

text: Zimbabwe

text: Giraffa camelopardalis

text: Giraffa camelopardalis


text: Copenhagen Univeristy

text: public

text: ena-SAMPLE-TAB-20-09-2023-09:25:11:260-59331

text: giraffe

text: Southern Central�giraffe DNA sample

text: Botswana

text: Giraffa camelopardalis

text: Giraffa camelopardalis


text: Copenhagen Univeristy

text: public

text: ena-SAMPLE-TAB-20-09-2023-09:25:11:260-59332

text: giraffe

text: Southern Central�giraffe DNA sample

text: Botswana

text: Giraffa camelopardalis

text: Giraffa camelopardalis


text: MEET

text: public

text: Mediterranean mussel

text: ancient mollusc shell

text: No

text: France

text: Occitanie, Balaruc-les-Bains

characteristic: geographic location (region and locality)

text: Mytilus galloprovincialis

text: Mytilus galloprovincialis

text: shell


text: MEET

text: public

text: ancient mollusc shell

text: No

text: Denmark

text: Zealand, Copenhagen

text: Mytilus edulis

text: Mytilus edulis

text: shell


text: MEET

text: public

text: ancient mollusc shell

text: No

text: Denmark

text: Jutland, Fannerup

text: Mytilus edulis

text: Mytilus edulis

text: shell


text: MEET

text: public

text: ancient mollusc shell

text: No

text: Denmark

text: Jutland, Havnoe

text: Mytilus edulis

text: Mytilus edulis

text: shell


text: MEET

text: public

text: ancient mollusc shell

text: No

text: Greenland

text: Kulusuk Island, Ikaasap Ittiva

text: Mytilus edulis

text: Mytilus edulis

text: shell


text: MEET

text: public

text: ancient mollusc shell

text: No

text: not applicable

text: Kara Sea

text: Mytilus edulis

text: Mytilus edulis

text: shell


text: MEET

text: public

text: ancient mollusc shell

text: No

text: Greenland

text: Sisimiut, Nipaitsoq

text: Mytilus edulis

text: Mytilus edulis

text: shell


text: MEET

text: public

text: ancient mollusc shell

text: No

text: Greenland

text: Qoornoq

text: Mytilus edulis

text: Mytilus edulis

text: shell


text: MEET

text: public

text: ancient mollusc shell

text: No

text: Denmark

text: Jutland, N�rre Lyngvig

text: Mytilus edulis

text: Mytilus edulis

text: shell


text: MEET

text: public

text: ancient mollusc shell

text: No

text: Greenland

text: Nipisat

text: Mytilus edulis

text: Mytilus edulis

text: shell


text: MEET

text: public

text: ancient mollusc shell

text: No

text: Denmark

text: Jutland, Soenderhald

text: Mytilus edulis

text: Mytilus edulis

text: shell


text: MEET

text: public

text: ancient mollusc shell

text: No

text: Greenland

text: Umiivik Island

text: Mytilus edulis

text: Mytilus edulis

text: shell


text: MEET

text: public

text: ancient mollusc shell

text: No

text: Greenland

text: West Greenland

text: Mytilus edulis

text: Mytilus edulis

text: shell


text: MEET

text: public

text: Extraction blank control

text: Yes

text: France

text: Occitanie, Toulouse

text: indoor metagenome

text: indoor metagenome


E-MTAB-13722:Group 1a

text: public

text: E-MTAB-13722:Group 1a

tag: Namespace:Department for BioMedical Research, DBMR, University of Bern

unit: month

characteristic: age

text: healthy skin

characteristic: allotransplantation

text: ArrayExpress

characteristic: broker name

text: not collected

text: pig

text: Protocols: We employed multiple MHC-mismatched Swiss Landrace pigs as both donors and recipients in our VCA procedures. These operations were conducted using the heterotopic porcine hindlimb VCA model, previously established and comprehensively documented. In summary, we procured osteo-myo-cutaneous limb allografts, including lymph nodes and skin paddles, from the donor pigs and transplanted them into a subcutaneous pocket created on the dorsolateral abdominal wall of the recipient pigs. Vessel anastomosis was performed between the graft and the recipient. The study encompasses six groups: Groups 1, 2, and 3 consist of skin tissue, while Groups 4, 5, and 6 comprise muscle tissue. Groups 1 and 4 represent the healthy control group, composed of three healthy donor pigs that underwent no prior manipulation, while others were rejection tissues. Groups 2 and 5 form the TGMS-TAC rejection group, where three recipients received TGMS-TAC. TGMS-TAC, as previously described (with a Tacrolimus concentration of 7 mg/mL), was injected into the specific graft at a dose of 140 mg per kg on post-operative day (POD) 0, 30, and 60, with 0.5 ml depots of TGMS-TAC subcutaneously injected into the skin graft. Groups 3 and 6 belong to the complete rejection group, featuring three recipients: one received oral administration of tacrolimus daily for the initial 14 days post-transplantation, while the other two recipients received a short course of systemic tacrolimus for 14 days, followed by intra-graft injections of 1.25 mL/kg-graft Rapa-loaded in situ forming implant (ISFI) loaded with 5 mg of rapamycin per 0.31 mL at multiple sites on POD 15. The animals were closely monitored until the graft skin displayed extensive epidermolysis, desquamation, and necrosis, serving as the endpoint criterion (corresponding to grade III-IV rejection) or until POD 90. Samples from the graft's skin and muscle were collected for analysis at the endpoint. We analyzed the mRNA transcriptome of 18 VCA samples, including skin and muscle from VCA transplant recipient pigs. The total RNA was extracted according to the instruction manual of the TRlzol Reagent (Life technologies, California, USA). Tissue samples (50-100 mg) were homogenized in 1 ml of TRI reagent and incubated for 5 minutes at 15-30 °C. We added 0.2 ml of chloroform and shook the mixture for 15 seconds. After an additional 2-3 minutes of incubation, we centrifuged it at 12,000 * g for 15 minutes. The RNA was precipitated by mixing the aqueous phase with isopropanol, followed by a 10-minute incubation at 15-30 °C. After a 10-minute centrifugation at 4 °C and 12,000 * g, we removed the supernatant, washed the RNA with 75% ethanol, and air-dried it for 5-10 minutes. The purified RNA was dissolved in RNase-free water, incubated at 55-60 °C for 10 minutes, and stored at -70 °C. We measured RNA concentration, purity, and integrity using the NanoDrop 2000 and the Agilent Bioanalyzer 2100 system. A total amount of 1 μg RNA per sample was used as input material for the RNA sample preparations. Sequencing libraries were generated using Hieff NGS Ultima Dual-mode mRNA Library Prep Kit for Illumina (Yeasen Biotechnology (Shanghai) Co., Ltd.) following manufacturer’s recommendations and index codes were added to attribute sequences to each sample. Briefly, mRNA was purified from total RNA using poly-T oligo-attached magnetic beads.First strand cDNA was synthesized and second strand cDNA synthesis was subsequently performed. Remaining overhangs were converted into blunt ends via exonuclease/polymerase activities. After adenylation of 3’ ends of DNA fragments, NEBNext Adaptor with hairpin loop structure were ligated to prepare for hybridization. The library fragments were purified with AMPure XP system (Beckman Coulter, Beverly, USA). Then 3 μl USER Enzyme (NEB, USA) was used with size-selected, adaptor-ligated cDNA at 37°C for 15 min followed by 5 min at 95°C before PCR. Then PCR was performed with Phusion High-Fidelity DNA polymerase, Universal PCR primers and Index (X) Primer. At last, PCR products were purified (AMPure XP system) and library quality was assessed on the Agilent Bioanalyzer 2100 system.

text: somatic genotype

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Sus scrofa

text: Sus scrofa

text: skin

characteristic: organism part

text: healthy skin

characteristic: sample group

text: Sus scrofa

text: female

characteristic: sex

characteristic: stimulus

text: Swiss Landrace

characteristic: strain

text: Group 1a


E-MTAB-13722:Group 1b

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Department for BioMedical Research, DBMR, University of Bern

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13722:Group 1b

characteristic: Submitter Id

text: healthy skin

text: ArrayExpress

text: not collected

characteristic: collection date

text: pig

text: somatic genotype

text: not collected

text: not applicable

text: Sus scrofa

text: Sus scrofa

text: skin

text: healthy skin

text: Sus scrofa

text: female

text: Swiss Landrace

text: Group 1b


E-MTAB-13722:Group 1c

text: public

text: E-MTAB-13722:Group 1c

characteristic: age

text: healthy skin

characteristic: allotransplantation

text: ArrayExpress

characteristic: broker name

text: not collected

text: pig

characteristic: common name

characteristic: description

text: somatic genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Sus scrofa

characteristic: organism

text: Sus scrofa

text: skin

text: healthy skin

text: Sus scrofa

text: female

text: Swiss Landrace

text: Group 1c

characteristic: title


E-MTAB-13722:Group 2a

characteristic: ENA first public

text: public

text: E-MTAB-13722:Group 2a

text: rejected skin

text: ArrayExpress

text: not collected

text: pig

text: somatic genotype

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Sus scrofa

text: Sus scrofa

text: skin

characteristic: organism part

text: rejected skin with TGMS-TAC

characteristic: sample group

text: Sus scrofa

text: male

characteristic: sex

text: TGMS-TAC

characteristic: stimulus

text: Swiss Landrace

characteristic: strain

text: Group 2a


E-MTAB-13722:Group 2b

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13722:Group 2b

characteristic: Submitter Id

text: rejected skin

text: ArrayExpress

text: not collected

characteristic: collection date

text: pig

text: somatic genotype

text: not collected

text: not applicable

text: Sus scrofa

text: Sus scrofa

text: skin

text: rejected skin with TGMS-TAC

text: Sus scrofa

text: male

text: TGMS-TAC

text: Swiss Landrace

text: Group 2b


E-MTAB-13722:Group 2c

text: public

text: E-MTAB-13722:Group 2c

characteristic: age

text: rejected skin

characteristic: allotransplantation

text: ArrayExpress

characteristic: broker name

text: not collected

text: pig

characteristic: common name

characteristic: description

text: somatic genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Sus scrofa

characteristic: organism

text: Sus scrofa

text: skin

text: rejected skin with TGMS-TAC

text: Sus scrofa

text: female

text: TGMS-TAC

text: Swiss Landrace

text: Group 2c

characteristic: title


E-MTAB-13722:Group 3a

characteristic: ENA first public

text: public

text: E-MTAB-13722:Group 3a

text: rejected skin

text: ArrayExpress

text: not collected

text: pig

text: somatic genotype

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Sus scrofa

text: Sus scrofa

text: skin

characteristic: organism part

text: rejected skin without TGMS-TAC

characteristic: sample group

text: Sus scrofa

text: female

characteristic: sex

characteristic: stimulus

text: Swiss Landrace

characteristic: strain

text: Group 3a


E-MTAB-13722:Group 3b

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13722:Group 3b

characteristic: Submitter Id

text: rejected skin

text: ArrayExpress

text: not collected

characteristic: collection date

text: pig

text: somatic genotype

text: not collected

text: not applicable

text: Sus scrofa

text: Sus scrofa

text: skin

text: rejected skin without TGMS-TAC

text: Sus scrofa

text: male

text: Swiss Landrace

text: Group 3b


E-MTAB-13722:Group 3c

text: public

text: E-MTAB-13722:Group 3c

characteristic: age

text: rejected skin

characteristic: allotransplantation

text: ArrayExpress

characteristic: broker name

text: not collected

text: pig

characteristic: common name

characteristic: description

text: somatic genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Sus scrofa

characteristic: organism

text: Sus scrofa

text: skin

text: rejected skin without TGMS-TAC

text: Sus scrofa

text: female

text: Swiss Landrace

text: Group 3c

characteristic: title


E-MTAB-13722:Group 4a

characteristic: ENA first public

text: public

text: E-MTAB-13722:Group 4a

text: healthy muscle

text: ArrayExpress

text: not collected

text: pig

text: somatic genotype

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Sus scrofa

text: Sus scrofa

text: skeletal muscle tissue

characteristic: organism part

text: healthy muscle

characteristic: sample group

text: Sus scrofa

text: female

characteristic: sex

characteristic: stimulus

text: Swiss Landrace

characteristic: strain

text: Group 4a


E-MTAB-13722:Group 4b

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13722:Group 4b

characteristic: Submitter Id

text: healthy muscle

text: ArrayExpress

text: not collected

characteristic: collection date

text: pig

text: somatic genotype

text: not collected

text: not applicable

text: Sus scrofa

text: Sus scrofa

text: skeletal muscle tissue

text: healthy muscle

text: Sus scrofa

text: female

text: Swiss Landrace

text: Group 4b


E-MTAB-13722:Group 4c

text: public

text: E-MTAB-13722:Group 4c

characteristic: age

text: healthy muscle

characteristic: allotransplantation

text: ArrayExpress

characteristic: broker name

text: not collected

text: pig

characteristic: common name

characteristic: description

text: somatic genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Sus scrofa

characteristic: organism

text: Sus scrofa

text: skeletal muscle tissue

text: healthy muscle

text: Sus scrofa

text: female

text: Swiss Landrace

text: Group 4c

characteristic: title


E-MTAB-13722:Group 5a

characteristic: ENA first public

text: public

text: E-MTAB-13722:Group 5a

text: rejected muscle

text: ArrayExpress

text: not collected

text: pig

text: somatic genotype

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Sus scrofa

text: Sus scrofa

text: skeletal muscle tissue

characteristic: organism part

text: rejected muscle with TGMS-TAC

characteristic: sample group

text: Sus scrofa

text: male

characteristic: sex

text: TGMS-TAC

characteristic: stimulus

text: Swiss Landrace

characteristic: strain

text: Group 5a


E-MTAB-13722:Group 5b

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13722:Group 5b

characteristic: Submitter Id

text: rejected muscle

text: ArrayExpress

text: not collected

characteristic: collection date

text: pig

text: somatic genotype

text: not collected

text: not applicable

text: Sus scrofa

text: Sus scrofa

text: skeletal muscle tissue

text: rejected muscle with TGMS-TAC

text: Sus scrofa

text: male

text: TGMS-TAC

text: Swiss Landrace

text: Group 5b


E-MTAB-13722:Group 5c

text: public

text: E-MTAB-13722:Group 5c

characteristic: age

text: rejected muscle

characteristic: allotransplantation

text: ArrayExpress

characteristic: broker name

text: not collected

text: pig

characteristic: common name

characteristic: description

text: somatic genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Sus scrofa

characteristic: organism

text: Sus scrofa

text: skeletal muscle tissue

text: rejected muscle with TGMS-TAC

text: Sus scrofa

text: female

text: TGMS-TAC

text: Swiss Landrace

text: Group 5c

characteristic: title


E-MTAB-13722:Group 6a

characteristic: ENA first public

text: public

text: E-MTAB-13722:Group 6a

text: rejected muscle

text: ArrayExpress

text: not collected

text: pig

text: somatic genotype

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Sus scrofa

text: Sus scrofa

text: skeletal muscle tissue

characteristic: organism part

text: rejected muscle without TGMS-TAC

characteristic: sample group

text: Sus scrofa

text: female

characteristic: sex

characteristic: stimulus

text: Swiss Landrace

characteristic: strain

text: Group 6a


E-MTAB-13722:Group 6b

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13722:Group 6b

characteristic: Submitter Id

text: rejected muscle

text: ArrayExpress

text: not collected

characteristic: collection date

text: pig

text: somatic genotype

text: not collected

text: not applicable

text: Sus scrofa

text: Sus scrofa

text: skeletal muscle tissue

text: rejected muscle without TGMS-TAC

text: Sus scrofa

text: male

text: Swiss Landrace

text: Group 6b


E-MTAB-13722:Group 6c

text: public

text: E-MTAB-13722:Group 6c

characteristic: age

text: rejected muscle

characteristic: allotransplantation

text: ArrayExpress

characteristic: broker name

text: not collected

text: pig

characteristic: common name

characteristic: description

text: somatic genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Sus scrofa

characteristic: organism

text: Sus scrofa

text: skeletal muscle tissue

text: rejected muscle without TGMS-TAC

text: Sus scrofa

text: female

text: Swiss Landrace

text: Group 6c

characteristic: title


characteristic: ENA first public

text: JGL dd.

text: public

text: ArrayExpress

text: neuronal

text: not collected

text: house mouse

text: Protocols: Individual adult mice LeprCreHTB, acclimated and non-acclimated, (P77 ± 5) were anesthetized with isoflurane and decapitated, the brain was immediately removed and submerged in ice-cold artificial of POALepR neurons involved in heat acclimation cerebrospinal fluid (ACSF). 3 brains were sectioned at the same time on a vibratome (Leica VT1200S) in a slicing chamber containing ice-cold ACSF (in Mm; 1.2 NaH2PO4xH2O, 2.5 KCl, 20HEPES, 25 glucose; 30 NaHCO3, 93 NMDG (n-methyl-glucamine), 5 Na-Ascorbate, 3 Na-pyruvate, 12 N-acetylcysteine, 10 MgSO4x7H2O, 0.5 CaCl2), constantly bubbled with carbogen. Brain slices of 250 μm thickness, containing the OVLT and MnPOA, were transferred to a Petri dish containing ACSF. We implemented the neuron isolation protocol described in Moffit et al. 2018. The regions of interest were micro dissected under a dissecting microscope and transferred to a small Petri dish containing 3ml of Papain mix consisting of Hibernate mix (Hibernate A medium (Invitrogen A1247501), 1xGlutamax (Gibco 35050-038), 0.8mM Kynurenic acid (Sigma K3375-5G), 0.05 mM AP-V (HelloBio HB0225), 0.01 mM Rock inhibitor Y-27632 (HelloBio HB2297), 1 mM B27 (Invitrogen 17504001), 5% Trehalose (Sigma T9531-10G)) and 8U/ml papain (Sigma P4762), 100U/ml DNAseI (Worthington über Cell-Systems LK003172), 0.005U/ml Chondroitinase ABC (Sigma C3667-5UN), 0.07% Hyaluronidase (Sigma, H2126), 0.001 mM NaOH where the tissue was cut in smaller pieces. The dissected tissue pieces were transferred together with the Papain mix into a 2ml tube at 37˚C to incubate while gently shaking (700 rpm) for 2h. After incubation, with the tissue pieces sitting at the bottom of the tube, the papain solution was pipetted out of the tube and exchanged with the hibernate mix containing 0.1mg/ml ovalbumin and centrifuged for 1 min at 300 g. Supernatant was removed, and hibernate mix was added to the tissue pieces which were further dissociated into single cells by gentle trituration through Pasteur pipettes with fire-polished tip openings of 600-μm, 300-μm, and 150- μm diameter. The cell suspension was centrifuged at RT at 300 g, for 10 minutes, and the supernatant was removed and exchanged with 500mul of Hibernate A medium.  FACS sorting Resuspended cell material was passed through a 20um filter. The cell suspension was stained with propidium iodide (PI BD Pharmingen, Cat 51 66211E, 2ml - 50ug/ml) to exclude the dead cells before the FACS analysis. FACS sorting was performed on BD FACS Aria II Flow Cytometry Cell Sorter using the “purity” sorting mode. FACS populations were arbitrarily chosen to select cells with low PI and high GFP fluorescence but the criteria were kept the same for each sorting round. Cells were FACS sorted into bulks of GFP+ and GFP directly into the RLT buffer (QIAGEN RNeasy Micro Kit 74004), immediately frozen on the dry ice, and stored at -80˚C.  Samples were further processed in a maximum of 1 month from the isolation day, by using the column purification method with QIAGEN RNeasy Micro Kit according to the manufacturer’s instructions. Samples were stored at -80 ˚C until further processing.   Samples were further processed in a maximum of 1 month from the isolation day, by using the column purification method with QIAGEN RNeasy Micro Kit according to the manufacturer’s instructions. Samples were stored at -80 ˚C until further processing.  RNA integrity and concentration of each sample were assessed by Agilent Bioanalyzer Nano 6000 chip (Agilent technologies) and QUBIT2 fluorometer measurement (Thermofisher Scientific) by manufacturer’s instruction. I used the Smart-Seq2 protocol for the cDNA library preparation (all processing performed at Gene Core EMBL, Heidelberg). 1ul of each bulk sample RNA was processed for the reverse transcription (Superscript IV, ThermoFisher Scientific, cat. no. 18090010) followed by 18 cycles of PCR amplification, library tagmentation via Tn5 transposase (Tn5 was produced in-house by Protein Expression and Purification Core Facility, EMBL Heidelberg), sample barcoding (Illumina primers) and final enrichment by 12 cycles of PCR.

text: adult

characteristic: developmental stage

text: normal

characteristic: disease

text: LepR-Cre-HTB

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

text: Mus musculus

text: Temperature exposure

characteristic: stimulus


characteristic: ENA-CHECKLIST

text: JGL dd.

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-14029:Sample_1_non_habituated_GFPm

characteristic: Submitter Id

text: ArrayExpress

text: neuronal

text: not collected

text: house mouse

text: adult

text: normal

text: LepR-Cre-HTB

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: No Temperature exposure


text: JGL dd.

text: public

text: E-MTAB-14029:Sample_1_non_habituated_GFPp

text: ArrayExpress

characteristic: broker name

text: neuronal

text: not collected

characteristic: collection date

text: house mouse

characteristic: common name

text: adult

text: normal

text: LepR-Cre-HTB

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: No Temperature exposure


text: JGL dd.

text: public

text: ArrayExpress

text: neuronal

text: not collected

text: house mouse

characteristic: description

text: adult

text: normal

text: LepR-Cre-HTB

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: Mus musculus

text: Short-term Temperature exposure


characteristic: ENA first public

text: JGL dd.

text: public

text: E-MTAB-14029:Sample_2_non_habituated_GFPm

text: ArrayExpress

text: neuronal

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: normal

text: LepR-Cre-HTB

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: No Temperature exposure

characteristic: title


text: JGL dd.

text: public

text: E-MTAB-14029:Sample_2_non_habituated_GFPp

text: ArrayExpress

text: neuronal

text: not collected

text: house mouse

text: adult

text: normal

characteristic: disease

text: LepR-Cre-HTB

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: No Temperature exposure


characteristic: ENA-CHECKLIST

text: JGL dd.

text: public

text: E-MTAB-14029:Sample_3_non_habituated_GFPm

text: ArrayExpress

text: neuronal

text: not collected

text: house mouse

text: adult

text: normal

text: LepR-Cre-HTB

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: brain

characteristic: organism part

text: Mus musculus

text: No Temperature exposure

characteristic: stimulus


text: JGL dd.

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-14029:Sample_3_non_habituated_GFPp

text: ArrayExpress

text: neuronal

text: not collected

text: house mouse

text: adult

text: normal

text: LepR-Cre-HTB

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: No Temperature exposure


text: JGL dd.

text: public

text: E-MTAB-14029:Sample_4_non_habituated_GFPm

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: neuronal

text: not collected

characteristic: collection date

text: house mouse

text: adult

text: normal

text: LepR-Cre-HTB

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: No Temperature exposure


text: JGL dd.

text: public

text: E-MTAB-14029:Sample_4_non_habituated_GFPp

text: ArrayExpress

text: neuronal

text: not collected

text: house mouse

characteristic: common name

characteristic: description

text: adult

text: normal

text: LepR-Cre-HTB

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: No Temperature exposure


characteristic: ENA first public

text: JGL dd.

text: public

text: E-MTAB-14029:Sample_5_non_habituated_GFPm

text: ArrayExpress

text: neuronal

text: not collected

text: house mouse

text: adult

characteristic: developmental stage

text: normal

text: LepR-Cre-HTB

text: not collected

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: Mus musculus

text: No Temperature exposure


text: JGL dd.

text: public

text: E-MTAB-14029:Sample_5_non_habituated_GFPp

text: ArrayExpress

text: neuronal

text: not collected

text: house mouse

text: adult

text: normal

characteristic: disease

text: LepR-Cre-HTB

characteristic: genotype

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: brain

text: Mus musculus

text: No Temperature exposure

characteristic: title


E-MTAB-14030:Sample 3

characteristic: ENA-CHECKLIST

text: PhD student  AG Blank - Molecular and Translational Allergology Center of Allergy and Environment (ZAUM) Technical University of Munich (TUM) - School of Medicine Helmholtz Center Munich, German Research Center for Environmental Health (GmbH) - Institute of Allergy Research (IAF)

text: public

text: E-MTAB-14030:Sample 3

text: 5 to 8

unit: week

characteristic: age

text: ArrayExpress

text: CD4-positive helper T cell

text: not collected

text: house mouse

text: Protocols:  To isolate pulmonary leukocytes, lungs were removed and chopped into small pieces. Digestion of lung tissue was performed in RPMI medium (Thermo Fisher Scientific) containing 1 mg/mL collagenase A and 100 µg/mL DNAse I (both from Sigma-Aldrich, Merck, Darmstadt, Germany) for 30 min at 37° C. Digested lung tissue was mashed trough a 70 µm cell strainer. Cells were pelleted (400 g, 4 °C, 5 min), resuspended in 5 mL 40% percoll in RPMI (v/v) solution, underlayered with 5 mL 80% percoll solution, and centrifuged (1600 g, RT, 15 min). Lymphocytes were collected from the interphase and washed with PBS. CD4+ T cells were enriched from pulmonary lymphocytes with the EasySepTM Mouse CD4+ T cell Isolation Kit and the EasyEightsTM EasySepTM Magnet (both from STEMCELL Technologies, Vancouver, Canada) according to the manufacturer’s instructions.  All libraries for scRNA-seq were prepared according to the manual (CG000315 Rev A) of the Chromium Next GEM Single Cell 3’ Reagent Kit v3.1 (Dual Index) provided by 10x Genomics B.V. (Leiden, The Netherlands). A cell recovery of 10.000 was targeted. All libraries for scRNA-seq were prepared according to the manual (CG000315 Rev A) of the Chromium Next GEM Single Cell 3’ Reagent Kit v3.1 (Dual Index) provided by 10x Genomics B.V. (Leiden, The Netherlands). A cell recovery of 10.000 was targeted.

text: adult

text: allergy

text: wild type genotype

text: not collected

text: SH17 _ 7-9 _ 28-30

characteristic: individual

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: lung

characteristic: organism part

text: Mus musculus

text: female

characteristic: sex

characteristic: strain

text: Sample 3


E-MTAB-14030:Sample 4

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-14030:Sample 4

characteristic: Submitter Id

text: 5 to 8

text: ArrayExpress

characteristic: broker name

text: CD4-positive helper T cell

text: not collected

characteristic: collection date

text: house mouse

text: adult

text: allergy

text: wild type genotype

text: not collected

text: SH17 _ 10-12 _ 31-33

text: not applicable

text: Mus musculus

text: Mus musculus

text: lung

text: Mus musculus

text: female

text: Sample 4


E-MTAB-14030:Sample 5

characteristic: ENA first public

text: public

text: E-MTAB-14030:Sample 5

text: 5 to 8

text: ArrayExpress

text: CD4-positive helper T cell

text: not collected

text: house mouse

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: allergy

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: SH17 _ 13-15 _ 34-36

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: lung

text: Mus musculus

text: female

text: Sample 5


characteristic: ENA-CHECKLIST

text: Hospital das Clínicas, Faculdade de Medicina, Universidade de São Paulo (HCFMUSP), Sao Paulo, Brazil

text: public

unit: year

characteristic: age

text: ArrayExpress

text: CD14-positive, CD16-negative classical monocyte

text: not collected

text: human

text: Protocols: Blood (70 ml) from RA patients and control group were collected, and peripheral blood mononuclear cells (PBMCs) were isolated by Ficoll density and dextran sedimentation. In both studied groups, monocytes were isolated from PBMCs by depletion of non-monocytes cells using an indirect magnetic labeling system. Classical monocytes were indirectly isolated using the CD16 MicroBeads human kit (Miltenyi Biotec®, Germany). Classical monocytes RNA was isolated using the RNeasy Plus Mini (Qiagen®), and RNA integrity number (RIN ≥ 7) was evaluated by the ScreenTape method using Bioanalyser 2100 (Agilent®). RNA library was constructed using the Quant-seq® 30 mRNA-Seq Library Prep Kit (Lexogen®).

text: adult

text: polyarticular juvenile idiopathic arthritis, rheumatoid factor positive

characteristic: disease

text: not collected

characteristic: individual

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

characteristic: title


characteristic: INSDC center name

text: public

text: ArrayExpress

text: not collected

text: human

text: adult

text: Polyarticular juvenile idiopathic arthritis

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: female

characteristic: sex


text: The Wadsworth Center, NYSDOH

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

text: Protocols: 1.0 µL from each pellet was resuspended in 20µL dH2O and incubated at 95˚C for 10 minutes.    PAM libraries were transformed into E. coli S17.  E. coli S17 + PAM libraries were grown in LB with 30 µg/mL Chloramphenicol to OD600 1.0, and then pooled equally.  The E. coli  S17 +PAM libraries were introduced into V. cholerae strains by conjugation, as previously described (Box et al., 2015).  100µL of cells from each conjugation were plated on LB plates containing 75 µg/mL kanamycin and 2.5 µg/mL chloramphenicol.  The plates were scraped the next day, and cells were resuspended in LB and pelleted.  From each cell resuspension, 1.0 µL was used as a template in a PCR reaction with universal forward oligonucleotide and reverse index oligonucleotides.  From each cell resuspension, 1.0 µL was used as a template in a PCR reaction with universal forward oligonucleotide and reverse index oligonucleotides.

text: KS808 CRISPR/Cas::KanR Δcas1

characteristic: genetic modification

text: not collected

text: not applicable

text: Vibrio cholerae

text: Vibrio cholerae

text: whole organism

characteristic: pam library plasmid

text: Vibrio cholerae


characteristic: ENA first public

text: The Wadsworth Center, NYSDOH

text: public

text: ArrayExpress

text: not collected

characteristic: collection date

characteristic: description

text: KS808 ΔCASCADE kanR

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Vibrio cholerae

text: Vibrio cholerae

text: whole organism

text: Vibrio cholerae


characteristic: ENA-CHECKLIST

text: IZSLT (Istituto Zooprofilattico Sperimentale del Lazio e la Toscana)

text: public

text: IZSLT

text: Italy

text: Salmonella enterica subsp. enterica serovar Enteritidis

characteristic: organism


text: public

text: IZSLT

text: Italy

text: Salmonella enterica

text: Salmonella enterica


text: public

text: IZSLT

text: E. coli

characteristic: common name

text: Italy

text: Escherichia coli

text: Escherichia coli


characteristic: INSDC center name

text: public

text: IZSLT

text: Italy

text: Salmonella enterica subsp. enterica serovar Napoli


IVT-CEVd #1

text: IOCB

text: public

text: IVT-CEVd #1

text: In vitro synthetized circular CEVd RNA, 0% m6A, sample #1

text: Czechia

text: Citrus exocortis viroid

text: Citrus exocortis viroid

text: IVT-CEVd #1

characteristic: title


IVT-CEVd #2

text: IOCB

text: public

text: IVT-CEVd #2

text: In vitro synthetized circular CEVd RNA, 0% m6A, sample #2

text: Czechia

text: Citrus exocortis viroid

text: Citrus exocortis viroid

text: IVT-CEVd #2


cCEVD #1

text: IOCB

text: public

text: cCEVD #1

text: Circular CEVd sample isolated from infected Gynura aurantiaca plant by double-PAGE purification, sample #1

text: Italy

text: Citrus exocortis viroid

text: Citrus exocortis viroid


HS-RNA #1

text: IOCB

text: public

text: HS-RNA #1

text: Highly Structured (HS) RNA library from CEVd-infected Gynura aurantiaca plant isolated by CF11/EtOH procedure.

text: Italy

text: Citrus exocortis viroid

text: Citrus exocortis viroid


HS-cRNA #1

text: IOCB

text: public

text: HS-cRNA #1

text: Highly Structured (HS) RNA library from CEVd-infected Gynura plant isolated by CF11/EtOH procedure, digested by RNAse R to retain circular RNAs. Linearized by zinc treatment. sample #1. PolyA tailed by E. coli polyA polymerase.

text: Italy

text: Citrus exocortis viroid

text: Citrus exocortis viroid


text: SIB - ETH ZURICH CBG

text: public

text: SIB

text: Christoph Ort, Tamar Kohn, Timothy R. Julian, Lea Caduff, Seju Kang, Ayazhan Dauletova, Camille Hablützel, Rachel McLeod, Daniela Yordanova, Jolinda de Korne, Charlie Gan, Catharine Aquino, Lennart Opitz, Tim Sykes, Katharina Jahn, Pelin Burcak Icer, David Dreifuss, Ivan Topolsky, Lara Fuhrmann, Kim Philipp Jablonski, Anika John, Matteo Carrara, Franziska Singer, Chaoran Chen, Sarah Nadeau, Niko Beerenwinkel, Tanja Stadler

characteristic: collector name

text: Switzerland

text: GR

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: Chur (GR)

characteristic: name of the sampling site

text: wastewater metagenome

characteristic: population size of the catchment area

text: wastewater metagenome

text: municipal wastewater treatment plan

characteristic: sewage type

characteristic: size of the catchment area

characteristic: surveillance target

text: hCoV-19/Switzerland/GR-ETHZ-E21720240130/2024


characteristic: ENA first public

text: SIB - ETH ZURICH CBG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Switzerland

text: GR

text: metagenome

text: Chur (GR)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/GR-ETHZ-G41720240312/2024


characteristic: ENA-CHECKLIST

text: SIB - ETH ZURICH CBG

text: public

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GR

text: metagenome

text: Chur (GR)

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/GR-ETHZ-G31720240221/2024


text: SIB - ETH ZURICH CBG

characteristic: INSDC center name

text: public

text: SIB

characteristic: collector name

text: Switzerland

text: BS

text: metagenome

text: Basel (BS)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/BS-ETHZ-G31520240404/2024

characteristic: title


text: SIB - ETH ZURICH CBG

text: public

text: SIB

text: Switzerland

text: SG

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: Altenrhein (SG)

characteristic: name of the sampling site

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/SG-ETHZ-G21920240407/2024


text: SIB - ETH ZURICH CBG

text: public

text: SIB

text: Switzerland

text: GR

text: metagenome

text: Chur (GR)

text: wastewater metagenome

characteristic: population size of the catchment area

text: wastewater metagenome

text: municipal wastewater treatment plan

characteristic: sewage type

characteristic: size of the catchment area

text: hCoV-19/Switzerland/GR-ETHZ-G21720240204/2024


characteristic: ENA first public

text: SIB - ETH ZURICH CBG

text: public

characteristic: INSDC status

text: SIB

text: Switzerland

text: GR

text: metagenome

text: Chur (GR)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

characteristic: surveillance target

text: hCoV-19/Switzerland/GR-ETHZ-G11720240116/2024


text: SIB - ETH ZURICH CBG

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

characteristic: broker name

text: Switzerland

text: TI

text: metagenome

text: Lugano (TI)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/TI-ETHZ-G10520240402/2024


characteristic: ENA-CHECKLIST

text: SIB - ETH ZURICH CBG

text: public

text: SIB

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GR

text: metagenome

text: Chur (GR)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/GR-ETHZ-F51720240329/2024


text: SIB - ETH ZURICH CBG

characteristic: INSDC center name

text: public

text: SIB

characteristic: collector name

text: Switzerland

text: GR

text: metagenome

text: Chur (GR)

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/GR-ETHZ-F41720240309/2024


text: SIB - ETH ZURICH CBG

text: public

text: SIB

text: Switzerland

text: GR

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: Chur (GR)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/GR-ETHZ-F31720240219/2024

characteristic: title


text: SIB - ETH ZURICH CBG

text: public

text: SIB

text: Switzerland

text: BS

text: metagenome

text: Basel (BS)

characteristic: name of the sampling site

text: wastewater metagenome

characteristic: population size of the catchment area

text: wastewater metagenome

text: municipal wastewater treatment plan

characteristic: sewage type

text: hCoV-19/Switzerland/BS-ETHZ-F31520240402/2024


characteristic: ENA first public

text: SIB - ETH ZURICH CBG

text: public

characteristic: INSDC status

text: SIB

text: Switzerland

text: SG

text: metagenome

text: Altenrhein (SG)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

characteristic: size of the catchment area

text: hCoV-19/Switzerland/SG-ETHZ-F21920240404/2024


text: SIB - ETH ZURICH CBG

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: Switzerland

text: GR

text: metagenome

text: Chur (GR)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

characteristic: surveillance target

text: hCoV-19/Switzerland/GR-ETHZ-F21720240202/2024


characteristic: ENA-CHECKLIST

text: SIB - ETH ZURICH CBG

text: public

text: SIB

characteristic: broker name

characteristic: collection date

text: Switzerland

text: GR

text: metagenome

text: Chur (GR)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/GR-ETHZ-E51720240326/2024


text: SIB - ETH ZURICH CBG

characteristic: INSDC center name

text: public

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GR

text: metagenome

text: Chur (GR)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/GR-ETHZ-F11720240406/2024


text: SIB - ETH ZURICH CBG

text: public

text: SIB

text: Christoph Ort, Tamar Kohn, Timothy R. Julian, Lea Caduff, Seju Kang, Ayazhan Dauletova, Camille Hablützel, Rachel McLeod, Daniela Yordanova, Jolinda de Korne, Charlie Gan, Catharine Aquino, Lennart Opitz, Tim Sykes, Katharina Jahn, Pelin Burcak Icer, David Dreifuss, Ivan Topolsky, Lara Fuhrmann, Kim Philipp Jablonski, Anika John, Matteo Carrara, Franziska Singer, Chaoran Chen, Sarah Nadeau, Niko Beerenwinkel, Tanja Stadler

text: Switzerland

text: GE

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: Genève (GE)

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/GE-ETHZ-E31620240408/2024


text: SIB - ETH ZURICH CBG

text: public

text: SIB

text: Switzerland

text: GR

text: metagenome

text: Chur (GR)

characteristic: name of the sampling site

text: wastewater metagenome

characteristic: population size of the catchment area

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/GR-ETHZ-E41720240306/2024

characteristic: title


characteristic: ENA first public

text: SIB - ETH ZURICH CBG

text: public

characteristic: INSDC status

text: SIB

text: Switzerland

text: GR

text: metagenome

text: Chur (GR)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

characteristic: sewage type

text: hCoV-19/Switzerland/GR-ETHZ-E31720240218/2024


text: SIB - ETH ZURICH CBG

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: Switzerland

text: SG

text: metagenome

text: Altenrhein (SG)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

characteristic: size of the catchment area

text: hCoV-19/Switzerland/SG-ETHZ-E21920240402/2024


characteristic: ENA-CHECKLIST

text: SIB - ETH ZURICH CBG

text: public

text: SIB

characteristic: broker name

text: Switzerland

text: GR

text: metagenome

text: Chur (GR)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

characteristic: surveillance target

text: hCoV-19/Switzerland/GR-ETHZ-E11720240403/2024


text: SIB - ETH ZURICH CBG

characteristic: INSDC center name

text: public

text: SIB

characteristic: collection date

characteristic: collector name

text: Switzerland

text: GR

text: metagenome

text: Chur (GR)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/GR-ETHZ-D41720240304/2024


text: SIB - ETH ZURICH CBG

text: public

text: SIB

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GR

characteristic: geographic location (region and locality)

text: metagenome

characteristic: investigation type

text: Chur (GR)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/GR-ETHZ-D31720240216/2024


text: SIB - ETH ZURICH CBG

text: public

text: SIB

text: Switzerland

text: GR

text: metagenome

text: Chur (GR)

characteristic: name of the sampling site

text: wastewater metagenome

characteristic: organism

characteristic: population size of the catchment area

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/GR-ETHZ-D51720240323/2024


characteristic: ENA first public

text: SIB - ETH ZURICH CBG

text: public

characteristic: INSDC status

text: SIB

text: Switzerland

text: GE

text: metagenome

text: Genève (GE)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/GE-ETHZ-D31620240406/2024

characteristic: title


text: SIB - ETH ZURICH CBG

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: Switzerland

text: GR

text: metagenome

text: Chur (GR)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

characteristic: sewage type

text: hCoV-19/Switzerland/GR-ETHZ-D21720240127/2024


characteristic: ENA-CHECKLIST

text: SIB - ETH ZURICH CBG

text: public

text: SIB

characteristic: broker name

text: Switzerland

text: LU

text: metagenome

text: Luzern (LU)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

characteristic: size of the catchment area

text: hCoV-19/Switzerland/LU-ETHZ-D21820240407/2024


text: SIB - ETH ZURICH CBG

characteristic: INSDC center name

text: public

text: SIB

characteristic: collection date

text: Switzerland

text: GR

text: metagenome

text: Chur (GR)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

characteristic: surveillance target

text: hCoV-19/Switzerland/GR-ETHZ-D11720240401/2024


text: SIB - ETH ZURICH CBG

text: public

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: GR

characteristic: geographic location (region and locality)

text: metagenome

text: Chur (GR)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/GR-ETHZ-C51720240320/2024


text: SIB - ETH ZURICH CBG

text: public

text: SIB

text: Switzerland

text: GR

text: metagenome

characteristic: investigation type

text: Chur (GR)

characteristic: name of the sampling site

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/GR-ETHZ-C31720240213/2024


characteristic: ENA first public

text: SIB - ETH ZURICH CBG

text: public

characteristic: INSDC status

text: SIB

text: Switzerland

text: GE

text: metagenome

text: Genève (GE)

text: wastewater metagenome

characteristic: population size of the catchment area

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/GE-ETHZ-C31620240405/2024


text: SIB - ETH ZURICH CBG

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SIB

text: Switzerland

text: LU

text: metagenome

text: Luzern (LU)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/LU-ETHZ-C21820240404/2024

characteristic: title


characteristic: ENA-CHECKLIST

text: SIB - ETH ZURICH CBG

text: public

text: SIB

characteristic: broker name

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text: hCoV-19/Switzerland/GE-ETHZ-C31620240417/2024


characteristic: ENA-CHECKLIST

text: SIB - ETH ZURICH CBG

text: public

characteristic: SRA accession

text: SIB

text: Switzerland

text: LU

text: metagenome

text: Luzern (LU)

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/LU-ETHZ-C21820240418/2024


text: SIB - ETH ZURICH CBG

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: SIB

text: Switzerland

text: ZH

text: metagenome

text: Zürich (ZH)

text: wastewater metagenome

characteristic: population size of the catchment area

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/ZH-ETHZ-C11020240420/2024


text: SIB - ETH ZURICH CBG

text: public

text: SIB

characteristic: broker name

characteristic: collection date

text: Switzerland

text: BE

text: metagenome

text: Laupen (BE)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/BE-ETHZ-B32520240421/2024

characteristic: title


text: SIB - ETH ZURICH CBG

text: public

text: SIB

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: LU

text: metagenome

text: Luzern (LU)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

characteristic: sewage type

text: hCoV-19/Switzerland/LU-ETHZ-B21820240416/2024


characteristic: ENA first public

text: SIB - ETH ZURICH CBG

text: public

text: SIB

text: Christoph Ort, Tamar Kohn, Timothy R. Julian, Lea Caduff, Seju Kang, Ayazhan Dauletova, Camille Hablützel, Rachel McLeod, Daniela Yordanova, Jolinda de Korne, Charlie Gan, Catharine Aquino, Lennart Opitz, Tim Sykes, Katharina Jahn, Pelin Burcak Icer, David Dreifuss, Ivan Topolsky, Lara Fuhrmann, Kim Philipp Jablonski, Anika John, Matteo Carrara, Franziska Singer, Chaoran Chen, Sarah Nadeau, Niko Beerenwinkel, Tanja Stadler

text: Switzerland

text: ZH

characteristic: geographic location (region and locality)

text: metagenome

text: Zürich (ZH)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

characteristic: size of the catchment area

text: hCoV-19/Switzerland/ZH-ETHZ-B11020240417/2024


text: SIB - ETH ZURICH CBG

text: public

characteristic: INSDC status

text: SIB

text: Switzerland

text: BE

text: metagenome

characteristic: investigation type

text: Laupen (BE)

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

characteristic: surveillance target

text: hCoV-19/Switzerland/BE-ETHZ-A32520240418/2024


characteristic: ENA-CHECKLIST

text: SIB - ETH ZURICH CBG

text: public

characteristic: SRA accession

text: SIB

text: Switzerland

text: TI

text: metagenome

text: Lugano (TI)

characteristic: name of the sampling site

text: wastewater metagenome

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/TI-ETHZ-A20520240421/2024


text: SIB - ETH ZURICH CBG

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: SIB

text: Switzerland

text: ZH

text: metagenome

text: Zürich (ZH)

text: wastewater metagenome

characteristic: organism

text: wastewater metagenome

text: municipal wastewater treatment plan

text: hCoV-19/Switzerland/ZH-ETHZ-A11020240415/2024


text: King Abdullah University of Science and Technology

text: public

text: ena-SAMPLE-TAB-06-05-2024-13:43:15:323-98289

text: not provided

characteristic: collection date

text: Clinical sample isolation

characteristic: description

text: Saudi Arabia

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


text: public

text: ena-SAMPLE-TAB-06-05-2024-13:43:15:323-98290

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

characteristic: geographic location (country and/or sea)

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus

characteristic: title


characteristic: ENA first public

text: public

text: ena-SAMPLE-TAB-06-05-2024-13:43:15:323-98291

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


text: public

text: ena-SAMPLE-TAB-06-05-2024-13:43:15:323-98292

text: not provided

text: Clinical sample isolation

text: Saudi Arabia

text: diseased

text: Homo sapiens

text: Clinical sample

text: Staphylococcus aureus

text: Staphylococcus aureus


characteristic: External Id

text: KAUST

characteristic: INSDC last update

text: public

text: cattle

characteristic: common name

text: Genomic DNA samples of virulent Ode cells were prepared by chromatin immunoprecipitation with H3K4me3 antibodies

text: Bos taurus

text: Bos taurus

text: H3K4me3 Ode cells, virulent


text: KAUST

text: public

characteristic: INSDC status

text: cattle

text: Genomic DNA samples of attenuated Ode cells were prepared by chromatin immunoprecipitation with H3K4me3 antibodies

text: Bos taurus

text: Bos taurus

text: H3K4me3 Ode cells, attenuated


characteristic: ENA-CHECKLIST

text: KAUST

text: public

text: cattle

text: Genomic DNA samples of virulent Ode cells were prepared by chromatin immunoprecipitation with H3K27me3 antibodies

text: Bos taurus

text: Bos taurus

text: H3K27me3 Ode cells, virulent


text: KAUST

text: public

characteristic: SRA accession

text: cattle

text: Genomic DNA samples of attenuated Ode cells were prepared by chromatin immunoprecipitation with H3K27me3 antibodies

text: Bos taurus

text: Bos taurus

text: H3K27me3 Ode cells, attenuated


text: KAUST

text: public

text: cattle

text: Genomic DNA samples of virulent Ode cells were prepared from an input sample

text: Bos taurus

text: Bos taurus

text: Input, Ode cells, virulent


text: KAUST

text: public

text: cattle

text: Genomic DNA samples of attenuated Ode cells were prepared from an input sample

text: Bos taurus

text: Bos taurus

text: Input, Ode cells, attenuated


text: KAUST

text: public

text: cattle

text: cDNA samples were prepared from RNA of attenuated Ode cells upon DMSO treatment

text: Bos taurus

text: Bos taurus

text: DMSO Ode cells, attenuated


text: KAUST

text: public

text: cattle

text: cDNA samples were prepared from RNA of virulent Ode cells upon DMSO treatment

text: Bos taurus

text: Bos taurus

text: DMSO Ode cells, virulent


text: KAUST

text: public

text: cattle

text: cDNA samples were prepared from RNA of attenuated Ode cells upon UNC1999 treatment

text: Bos taurus

text: Bos taurus

text: UNC1999 Ode cells, attenuated


text: KAUST

text: public

text: cattle

text: cDNA samples were prepared from RNA of virulent Ode cells upon UNC1999 treatment

text: Bos taurus

text: Bos taurus

text: UNC1999 Ode cells, virulent


text: KAUST

text: public

text: cattle

text: cDNA samples were prepared from RNA of attenuated Ode cells upon UNC2400 treatment

text: Bos taurus

text: Bos taurus

text: UNC2400 Ode cells, attenuated


text: KAUST

text: public

text: cattle

text: cDNA samples were prepared from RNA of virulent Ode cells upon UNC2400 treatment

text: Bos taurus

text: Bos taurus

text: UNC2400 Ode cells, virulent


text: UNIVERSITY OF LEICESTER

text: public

tag: Namespace:UNIVERSITY OF LEICESTER

text: CF

text: Lung

characteristic: environment (biome)

text: Microbiome

characteristic: environment (feature)

text: Sputum

characteristic: environment (material)

text: United Kingdom

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human-associated environmental package

text: metagenome

characteristic: investigation type

text: human lung metagenome

text: CF microbiome

characteristic: project name

text: human lung metagenome

text: Illumina MiSeq

characteristic: sequencing method


text: UNIVERSITY OF LEICESTER

characteristic: INSDC center name

text: public

characteristic: Submitter Id

characteristic: collection date

text: CF

characteristic: description

text: Lung

text: Microbiome

text: BAL

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: human-associated

text: metagenome

text: human lung metagenome

characteristic: organism

text: CF microbiome

text: human lung metagenome

text: Illumina MiSeq

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UNIVERSITY OF LEICESTER

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Healthy

text: Lung

text: Microbiome

text: Sputum

text: United Kingdom

text: human-associated

text: metagenome

text: human lung metagenome

text: CF microbiome

text: human lung metagenome

text: Illumina MiSeq


text: UNIVERSITY OF LEICESTER

text: public

text: not collected

text: KitControl

text: Control

characteristic: environment (biome)

text: Control

characteristic: environment (feature)

text: not provided

characteristic: environment (material)

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: human-associated

characteristic: human-associated environmental package

text: metagenome

text: human lung metagenome

text: CF microbiome

text: human lung metagenome

text: Illumina MiSeq


text: UNIVERSITY OF LEICESTER

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: not collected

characteristic: collection date

text: NegControl

text: Control

text: Control

text: not provided

text: United Kingdom

text: human-associated

text: metagenome

characteristic: investigation type

text: human lung metagenome

text: CF microbiome

characteristic: project name

text: human lung metagenome

text: Illumina MiSeq

characteristic: sequencing method


text: Unknown

characteristic: ArrayExpress-PHENOTYPE

text: unknown

characteristic: ArrayExpress-SEX

text: human

characteristic: ArrayExpress-SPECIES

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Unknown

characteristic: GENDER

text: SC

text: public

text: Unknown

characteristic: PHENOTYPE

text: human

characteristic: common name

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: title


Euprymna berryi

characteristic: External Id

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Euprymna berryi

tag: Namespace:Okinawa Institute of Science and Technology Graduate University

text: Euprymna berryi

characteristic: description

text: Adult

text: Euprymna berryi

text: Euprymna berryi

text: Male

characteristic: sex

text: Sperm

text: Euprymna berryi


text: Genome Institute of Singapore

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:819-3307

tag: Namespace:Genome Institute of Singapore

characteristic: Submitter Id

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:819-3308

text: Isolates

text: Enterobacter cloacae

text: Enterobacter cloacae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:819-3309

text: Isolates

text: Enterobacter cloacae

text: Enterobacter cloacae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:819-3310

text: Isolates

text: Enterobacter cloacae

text: Enterobacter cloacae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:819-3311

text: Isolates

text: Enterobacter cloacae

text: Enterobacter cloacae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3312

text: Isolates

text: Enterobacter cloacae

text: Enterobacter cloacae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3313

text: Isolates

text: Citrobacter amalonaticus

text: Citrobacter amalonaticus


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3314

text: Isolates

text: Citrobacter farmeri

text: Citrobacter farmeri


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3315

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3316

text: Isolates

text: Citrobacter amalonaticus

text: Citrobacter amalonaticus


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3317

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3318

text: Isolates

text: Citrobacter farmeri

text: Citrobacter farmeri


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3319

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3320

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3321

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3322

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3323

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3324

text: Isolates

text: Enterobacter cloacae

text: Enterobacter cloacae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3325

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3326

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3327

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3328

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3329

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3330

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3331

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3332

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3333

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3334

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3335

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3336

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3337

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3338

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3339

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3340

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3341

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:820-3342

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3343

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3344

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3345

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3346

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3347

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3348

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3349

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3350

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3351

text: Isolates

text: Enterobacter cloacae

text: Enterobacter cloacae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3352

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3353

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3354

text: Isolates

text: Enterobacter cloacae

text: Enterobacter cloacae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3355

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3356

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3357

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3358

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3359

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3360

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3361

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3362

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3363

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3364

text: Isolates

text: Klebsiella oxytoca

text: Klebsiella oxytoca


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3365

text: Isolates

text: Klebsiella aerogenes

text: Klebsiella aerogenes


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3366

text: Isolates

text: Enterobacter cloacae

text: Enterobacter cloacae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3367

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3368

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:821-3369

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:822-3370

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:822-3371

text: Isolates

text: Escherichia coli

text: Escherichia coli


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:822-3372

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:822-3373

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:822-3374

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:822-3375

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae


text: Genome Institute of Singapore

text: public

text: ena-SAMPLE-TAB-06-05-2022-17:42:16:822-3376

text: Isolates

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae