characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00027773_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: sequencing method


status: PUBLIC

tag: attribute

text: public

text: pooled_unmapgallusfeed_hifi_tig00030940_hicanu_circ

tag: Namespace:The Roslin Institute (University of Edinburgh)

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

text: canu maxInputCoverage=100000 correctedErrorRate=0.105 genomeSize=5m batMemory=200 useGrid= -pacbio-hifi

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS16138939, ERS16138940, ERS16138921, ERS16138927

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Caecal contents from a chicken (Gallus gallus)

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

text: Metagenomic characterisation of the caecal microbiota of XCR1 knockout chickens

characteristic: project name

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text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker

characteristic: title


characteristic: ENA first public

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text: The Roslin Institute (University of Edinburgh)

characteristic: INSDC center name

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characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00035977_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: ERS16138939, ERS16138940, ERS16138921, ERS16138927

text: metagenome

text: Sequel IIe

characteristic: sequencing method


text: public

text: pooled_unmapgallusfeed_hifi_tig00036405_hicanu_circ

characteristic: assembly quality

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text: Not applicable

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text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

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text: United Kingdom

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characteristic: investigation type

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characteristic: SRA accession

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characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

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characteristic: geographic location (longitude)

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text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

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characteristic: title


text: public

text: pooled_unmapgallusfeed_hifi_tig00037568_hicanu_circ

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text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

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text: United Kingdom

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characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

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characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

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text: public

text: pooled_unmapgallusfeed_hifi_tig00037782_hicanu_circ

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text: Not applicable

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text: Gallus gallus

characteristic: broad-scale environmental context

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characteristic: completeness score

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text: Caecal contents

text: United Kingdom

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characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

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characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

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characteristic: sequencing method


text: public

text: pooled_unmapgallusfeed_hifi_tig00041309_hicanu_circ

characteristic: assembly quality

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text: Not applicable

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text: Gallus gallus

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characteristic: collection date

characteristic: completeness score

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text: United Kingdom

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text: HiCanu

text: Not applicable

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characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

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characteristic: geographic location (longitude)

text: metagenome

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characteristic: local environmental context

text: chicken gut metagenome

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characteristic: title


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characteristic: assembly quality

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text: Not applicable

characteristic: binning software

text: Gallus gallus

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characteristic: collection date

characteristic: completeness score

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characteristic: contamination score

text: Caecal contents

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characteristic: investigation type

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text: public

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text: pooled_unmapgallusfeed_hifi_tig00043285_hicanu_circ

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


text: public

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characteristic: assembly quality

text: HiCanu

characteristic: assembly software

text: canu maxInputCoverage=100000 correctedErrorRate=0.105 genomeSize=5m batMemory=200 useGrid= -pacbio-hifi

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS16138939, ERS16138940, ERS16138921, ERS16138927

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

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characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

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text: United Kingdom

characteristic: geographic location (country and/or sea)

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characteristic: geographic location (longitude)

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text: Caecal contents from a chicken (Gallus gallus)

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

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text: metagenome

text: Sequel IIe

characteristic: sequencing method


text: public

text: pooled_unmapgallusfeed_hifi_tig00047354_hicanu_circ

characteristic: assembly quality

text: HiCanu

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characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

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characteristic: collection date

characteristic: completeness score

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characteristic: Submitter Id

text: HiCanu

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characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

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characteristic: geographic location (longitude)

text: metagenome

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characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

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characteristic: title


text: public

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characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

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text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

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text: United Kingdom

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characteristic: investigation type

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text: metagenome

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text: public

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characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


text: public

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characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

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characteristic: investigation type

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characteristic: metagenomic source

text: metagenome

characteristic: organism

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text: public

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characteristic: Submitter Id

text: HiCanu

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text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: sequencing method


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characteristic: assembly quality

text: HiCanu

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characteristic: binning parameters

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text: Gallus gallus

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characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

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characteristic: metagenomic source

text: metagenome

characteristic: organism

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text: Sequel IIe

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text: public

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characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

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characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: title


text: public

text: pooled_unmapgallusfeed_hifi_tig00050631_hicanu_circ

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

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characteristic: metagenomic source

text: metagenome

characteristic: organism

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text: Sequel IIe

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text: public

characteristic: INSDC status

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text: pooled_unmapgallusfeed_hifi_tig00050780_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: canu maxInputCoverage=100000 correctedErrorRate=0.105 genomeSize=5m batMemory=200 useGrid= -pacbio-hifi

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


text: The Roslin Institute (University of Edinburgh)

text: public

text: pooled_unmapgallusfeed_hifi_tig00050810_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS16138939, ERS16138940, ERS16138921, ERS16138927

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00050857_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Caecal contents from a chicken (Gallus gallus)

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: Metagenomic characterisation of the caecal microbiota of XCR1 knockout chickens

text: metagenome

text: Sequel IIe

characteristic: sequencing method


text: public

text: pooled_unmapgallusfeed_hifi_tig00050987_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

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characteristic: investigation type

text: Gastrointestinal tract microbiota

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text: metagenome

characteristic: organism

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00051230_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: title


text: public

text: pooled_unmapgallusfeed_hifi_tig00051262_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

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text: metagenome

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text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00051263_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


text: public

text: pooled_unmapgallusfeed_hifi_tig00051264_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

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characteristic: metagenomic source

text: metagenome

characteristic: organism

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text: metagenome

text: Sequel IIe

characteristic: title


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text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00051679_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: sequencing method


text: public

text: pooled_unmapgallusfeed_hifi_tig00052464_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00052562_hicanu_circ

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: title


text: public

text: pooled_unmapgallusfeed_hifi_tig00053746_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

text: canu maxInputCoverage=100000 correctedErrorRate=0.105 genomeSize=5m batMemory=200 useGrid= -pacbio-hifi

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: sequencing method


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: The Roslin Institute (University of Edinburgh)

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00053886_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


text: public

text: pooled_unmapgallusfeed_hifi_tig00054083_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS16138939, ERS16138940, ERS16138921, ERS16138927

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00054548_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Caecal contents from a chicken (Gallus gallus)

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: Metagenomic characterisation of the caecal microbiota of XCR1 knockout chickens

text: metagenome

text: Sequel IIe

characteristic: sequencing method


text: public

text: pooled_unmapgallusfeed_hifi_tig00055148_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

text: ERS16138939, ERS16138940, ERS16138921, ERS16138927

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00055247_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: title


text: public

text: pooled_unmapgallusfeed_hifi_tig00055354_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: sequencing method


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00055470_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


text: public

text: pooled_unmapgallusfeed_hifi_tig00055634_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00056091_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: sequencing method


text: public

text: pooled_unmapgallusfeed_hifi_tig00056433_hicanu_circ

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00056434_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: canu maxInputCoverage=100000 correctedErrorRate=0.105 genomeSize=5m batMemory=200 useGrid= -pacbio-hifi

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: title


text: The Roslin Institute (University of Edinburgh)

text: public

text: pooled_unmapgallusfeed_hifi_tig00056601_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: sequencing method


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057005_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

text: This sample represents a metagenomic bin from the metagenomic sample ERS16138939, ERS16138940, ERS16138921, ERS16138927

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


text: public

text: pooled_unmapgallusfeed_hifi_tig00057038_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Caecal contents from a chicken (Gallus gallus)

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057077_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: Metagenomic characterisation of the caecal microbiota of XCR1 knockout chickens

text: metagenome

text: Sequel IIe

characteristic: sequencing method


text: public

text: pooled_unmapgallusfeed_hifi_tig00057118_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

text: ERS16138939, ERS16138940, ERS16138921, ERS16138927

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057119_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: title


text: public

text: pooled_unmapgallusfeed_hifi_tig00057175_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: sequencing method


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057290_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


text: public

text: pooled_unmapgallusfeed_hifi_tig00057315_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057379_hicanu_circ

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: sequencing method


text: public

text: pooled_unmapgallusfeed_hifi_tig00057403_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

text: canu maxInputCoverage=100000 correctedErrorRate=0.105 genomeSize=5m batMemory=200 useGrid= -pacbio-hifi

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: The Roslin Institute (University of Edinburgh)

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057406_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: title


text: public

text: pooled_unmapgallusfeed_hifi_tig00057541_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS16138939, ERS16138940, ERS16138921, ERS16138927

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: sequencing method


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057606_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Caecal contents from a chicken (Gallus gallus)

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


text: public

text: pooled_unmapgallusfeed_hifi_tig00057626_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

text: Metagenomic characterisation of the caecal microbiota of XCR1 knockout chickens

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057636_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: ERS16138939, ERS16138940, ERS16138921, ERS16138927

text: metagenome

text: Sequel IIe

characteristic: sequencing method


text: public

text: pooled_unmapgallusfeed_hifi_tig00057647_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057653_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: title


text: public

text: pooled_unmapgallusfeed_hifi_tig00057663_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: sequencing method


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057688_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


text: public

text: pooled_unmapgallusfeed_hifi_tig00057699_hicanu_circ

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057711_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: canu maxInputCoverage=100000 correctedErrorRate=0.105 genomeSize=5m batMemory=200 useGrid= -pacbio-hifi

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: sequencing method


text: The Roslin Institute (University of Edinburgh)

text: public

text: pooled_unmapgallusfeed_hifi_tig00057724_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057735_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

text: This sample represents a metagenomic bin from the metagenomic sample ERS16138939, ERS16138940, ERS16138921, ERS16138927

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: title


text: public

text: pooled_unmapgallusfeed_hifi_tig00057742_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Caecal contents from a chicken (Gallus gallus)

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: sequencing method


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057744_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: Metagenomic characterisation of the caecal microbiota of XCR1 knockout chickens

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


text: public

text: pooled_unmapgallusfeed_hifi_tig00057763_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

text: ERS16138939, ERS16138940, ERS16138921, ERS16138927

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057767_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: sequencing method


text: public

text: pooled_unmapgallusfeed_hifi_tig00057780_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057787_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: title


text: public

text: pooled_unmapgallusfeed_hifi_tig00057798_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: sequencing method


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057807_hicanu_circ

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


text: public

text: pooled_unmapgallusfeed_hifi_tig00057813_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

text: canu maxInputCoverage=100000 correctedErrorRate=0.105 genomeSize=5m batMemory=200 useGrid= -pacbio-hifi

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: The Roslin Institute (University of Edinburgh)

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057829_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: sequencing method


text: public

text: pooled_unmapgallusfeed_hifi_tig00057840_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS16138939, ERS16138940, ERS16138921, ERS16138927

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057851_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Caecal contents from a chicken (Gallus gallus)

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: title


text: public

text: pooled_unmapgallusfeed_hifi_tig00057852_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

text: Metagenomic characterisation of the caecal microbiota of XCR1 knockout chickens

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: sequencing method


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057853_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: ERS16138939, ERS16138940, ERS16138921, ERS16138927

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


text: public

text: pooled_unmapgallusfeed_hifi_tig00057884_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057885_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: sequencing method


text: public

text: pooled_unmapgallusfeed_hifi_tig00057901_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057902_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: title


text: public

text: pooled_unmapgallusfeed_hifi_tig00057905_hicanu_circ

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: sequencing method


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057906_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: canu maxInputCoverage=100000 correctedErrorRate=0.105 genomeSize=5m batMemory=200 useGrid= -pacbio-hifi

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


text: The Roslin Institute (University of Edinburgh)

text: public

text: pooled_unmapgallusfeed_hifi_tig00057907_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057909_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

text: This sample represents a metagenomic bin from the metagenomic sample ERS16138939, ERS16138940, ERS16138921, ERS16138927

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: sequencing method


text: public

text: pooled_unmapgallusfeed_hifi_tig00057919_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Caecal contents from a chicken (Gallus gallus)

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057920_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: Metagenomic characterisation of the caecal microbiota of XCR1 knockout chickens

text: metagenome

text: Sequel IIe

characteristic: title


text: public

text: pooled_unmapgallusfeed_hifi_tig00057921_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

text: ERS16138939, ERS16138940, ERS16138921, ERS16138927

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: sequencing method


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057926_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


text: public

text: pooled_unmapgallusfeed_hifi_tig00057928_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00057929_hicanu_circ

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: sequencing method


text: public

text: pooled_unmapgallusfeed_hifi_tig00057930_hicanu_circ

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00000045_hicanu_large

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: title


text: public

text: pooled_unmapgallusfeed_hifi_tig00000238_hicanu_large

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

text: canu maxInputCoverage=100000 correctedErrorRate=0.105 genomeSize=5m batMemory=200 useGrid= -pacbio-hifi

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: sequencing method


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: The Roslin Institute (University of Edinburgh)

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00000259_hicanu_large

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


text: public

text: pooled_unmapgallusfeed_hifi_tig00000284_hicanu_large

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a metagenomic bin from the metagenomic sample ERS16138939, ERS16138940, ERS16138921, ERS16138927

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00000528_hicanu_large

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Caecal contents from a chicken (Gallus gallus)

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: metagenome

text: Sequel IIe

characteristic: sequencing method


text: public

text: pooled_unmapgallusfeed_hifi_tig00000669_hicanu_large

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

text: Metagenomic characterisation of the caecal microbiota of XCR1 knockout chickens

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: pooled_unmapgallusfeed_hifi_tig00000719_hicanu_large

characteristic: Submitter Id

text: HiCanu

text: Not applicable

text: Gallus gallus

characteristic: description

text: Caecal contents

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

text: Gastrointestinal tract microbiota

characteristic: local environmental context

text: chicken gut metagenome

text: metagenome

text: ERS16138939, ERS16138940, ERS16138921, ERS16138927

text: metagenome

text: Sequel IIe

characteristic: title


text: public

text: pooled_unmapgallusfeed_hifi_tig00000787_hicanu_large

characteristic: assembly quality

text: HiCanu

characteristic: assembly software

characteristic: binning parameters

text: Not applicable

characteristic: binning software

text: Gallus gallus

characteristic: broad-scale environmental context

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: Caecal contents

text: United Kingdom

text: metagenome

characteristic: investigation type

text: Gastrointestinal tract microbiota

text: chicken gut metagenome

characteristic: metagenomic source

text: metagenome

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: metagenome

text: Sequel IIe

characteristic: sequencing method