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text: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; ; Alsobacter

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

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text: fresh water

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characteristic: investigation type

text: Freshwater lake

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characteristic: metagenomic source

text: Alsobacter soli

characteristic: project name

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text: Alsobacter soli

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characteristic: sequencing method

text: multi-marker approach


status: PUBLIC

characteristic: ENA first public

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

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characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

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text: Bacteria; Planctomycetes

text: freshwater lake

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characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

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text: Candidatus Kuenenia stuttgartiensis

characteristic: organism

text: Candidatus Kuenenia stuttgartiensis

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characteristic: taxonomic identity marker

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text: BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO

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characteristic: binning parameters

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text: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

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characteristic: metagenomic source

text: Flavobacterium psychrophilum

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text: coverage and kmer

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text: Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae

text: freshwater lake

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characteristic: geographic location (country and/or sea)

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text: metagenome-assembled genome

text: Freshwater lake

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text: Opitutus sp. GAS368

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text: Opitutus sp. GAS368

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text: Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexaceae

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text: lake

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text: fresh water

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characteristic: investigation type

text: Freshwater lake

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text: Roseiflexus castenholzii DSM 13941

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characteristic: INSDC center name

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Akkermansia muciniphila

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text: Akkermansia muciniphila

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characteristic: binning parameters

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text: Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae

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text: Streptomyces griseus

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

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text: Candidatus Kuenenia stuttgartiensis

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text: Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae

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text: freshwater lake

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text: lake

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text: fresh water

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characteristic: investigation type

text: Freshwater lake

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characteristic: metagenomic source

text: Planctomicrobium piriforme

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characteristic: ENA first public

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text: public

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

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text: metagenome-assembled genome

text: Freshwater lake

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text: Chitinophaga pinensis

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characteristic: binning parameters

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text: Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobiaceae

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text: lake

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characteristic: investigation type

text: Freshwater lake

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text: Prosthecobacter debontii

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text: Bacteria; Actinobacteria; Actinobacteria

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

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text: Bifidobacterium breve

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text: Bacteria; Proteobacteria; Betaproteobacteria

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text: freshwater lake

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text: fresh water

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text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

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characteristic: metagenomic source

text: Bordetella parapertussis

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characteristic: geographic location (country and/or sea)

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characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

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text: Singulisphaera sp. GP187

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text: Singulisphaera sp. GP187

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characteristic: binning parameters

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text: Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales

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text: freshwater lake

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text: fresh water

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text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

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characteristic: metagenomic source

text: Nitrosovibrio sp. Nv4

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characteristic: sequencing method

text: multi-marker approach


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text: public

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

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text: Rhizobium sp. Q54

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text: Bacteria; Proteobacteria; Gammaproteobacteria; Nevskiales; Sinobacteraceae

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characteristic: investigation type

text: Freshwater lake

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characteristic: metagenomic source

text: Hydrocarboniphaga daqingensis

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text: freshwater lake

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

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text: Asaia bogorensis

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text: Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales

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text: lake

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text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

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characteristic: metagenomic source

text: Ferrithrix thermotolerans DSM 19514

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Klebsiella pneumoniae

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text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

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characteristic: binning parameters

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text: Bacteria; Proteobacteria; Oligoflexia; Oligoflexales

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text: freshwater lake

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text: fresh water

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text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

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characteristic: metagenomic source

text: Pseudobacteriovorax antillogorgiicola

characteristic: project name

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characteristic: INSDC center name

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text: coverage and kmer

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text: Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

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text: metagenome-assembled genome

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text: Phenylobacterium deserti

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text: Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales

characteristic: description

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characteristic: investigation type

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text: Crenothrix polyspora

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text: Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Methylophilaceae; Methylotenera

text: freshwater lake

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

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text: Methylotenera oryzisoli

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characteristic: investigation type

text: Freshwater lake

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

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characteristic: binning parameters

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text: Bacteria; Gemmatimonadetes; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae

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text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

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text: Gemmatimonas phototrophica

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characteristic: sequencing method

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characteristic: geographic location (country and/or sea)

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characteristic: geographic location (longitude)

text: metagenome-assembled genome

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characteristic: binning parameters

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characteristic: investigation type

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characteristic: metagenomic source

text: Chitinophaga pinensis

characteristic: project name

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text: Chitinophaga pinensis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Actinobacteria; Actinobacteria

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Bifidobacterium breve

characteristic: organism

text: Bifidobacterium breve

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexaceae

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Roseiflexus castenholzii DSM 13941

characteristic: project name

characteristic: sample derived from

text: Roseiflexus castenholzii DSM 13941

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Beijerinckia sp. 28-YEA-48

characteristic: organism

text: Beijerinckia sp. 28-YEA-48

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Cyanobacteria; ; Synechococcales; Synechococcaceae

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Synechococcus sp. UW140

characteristic: project name

characteristic: sample derived from

text: Synechococcus sp. UW140

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Acidobacteria

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Candidatus Sulfopaludibacter sp. SbA3

characteristic: organism

text: Candidatus Sulfopaludibacter sp. SbA3

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Proteobacteria

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Klebsiella pneumoniae

characteristic: project name

characteristic: sample derived from

text: Klebsiella pneumoniae

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Pedosphaera parvula Ellin514

characteristic: organism

text: Pedosphaera parvula Ellin514

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; ; Alsobacter

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Alsobacter soli

characteristic: project name

characteristic: sample derived from

text: Alsobacter soli

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Deltaproteobacteria

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Syntrophobacter sp. SbD2

characteristic: organism

text: Syntrophobacter sp. SbD2

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Chryseobacterium gleum

characteristic: project name

characteristic: sample derived from

text: Chryseobacterium gleum

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Betaproteobacteria

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Bordetella parapertussis

characteristic: organism

text: Bordetella parapertussis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Proteobacteria; Oligoflexia; Bdellovibrionales; Bdellovibrionaceae

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Bdellovibrio sp. ZAP7

characteristic: project name

characteristic: sample derived from

text: Bdellovibrio sp. ZAP7

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Bordetella parapertussis

characteristic: organism

text: Bordetella parapertussis

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Akkermansia muciniphila

characteristic: project name

characteristic: sample derived from

text: Akkermansia muciniphila

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Gemmatimonas phototrophica

characteristic: organism

text: Gemmatimonas phototrophica

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Asaia bogorensis

characteristic: project name

characteristic: sample derived from

text: Asaia bogorensis

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Gammaproteobacteria

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Klebsiella pneumoniae

characteristic: organism

text: Klebsiella pneumoniae

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Bacteroidetes

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Chitinophaga pinensis

characteristic: project name

characteristic: sample derived from

text: Chitinophaga pinensis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Gammaproteobacteria; Nevskiales; Sinobacteraceae

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Hydrocarboniphaga daqingensis

characteristic: organism

text: Hydrocarboniphaga daqingensis

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Acidobacteria; Acidobacteriia; Bryobacterales

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Candidatus Sulfopaludibacter sp. SbA3

characteristic: project name

characteristic: sample derived from

text: Candidatus Sulfopaludibacter sp. SbA3

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Planctomycetes

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Candidatus Kuenenia stuttgartiensis

characteristic: organism

text: Candidatus Kuenenia stuttgartiensis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Actinobacteria; Actinobacteria

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Bifidobacterium breve

characteristic: project name

characteristic: sample derived from

text: Bifidobacterium breve

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Fibrobacteres

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Fibrobacter sp. UWT3

characteristic: organism

text: Fibrobacter sp. UWT3

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Proteobacteria; Alphaproteobacteria

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Rhizobium sp. Q54

characteristic: project name

characteristic: sample derived from

text: Rhizobium sp. Q54

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Streptomyces griseus

characteristic: organism

text: Streptomyces griseus

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Planctomycetes; Planctomycetia

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Singulisphaera sp. GP187

characteristic: project name

characteristic: sample derived from

text: Singulisphaera sp. GP187

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobiaceae; Prosthecobacter

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Prosthecobacter debontii

characteristic: organism

text: Prosthecobacter debontii

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Pseudoxanthobacter soli DSM 19599

characteristic: project name

characteristic: sample derived from

text: Pseudoxanthobacter soli DSM 19599

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Nitrosovibrio sp. Nv4

characteristic: organism

text: Nitrosovibrio sp. Nv4

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Methylophilaceae; Methylotenera

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Methylotenera oryzisoli

characteristic: project name

characteristic: sample derived from

text: Methylotenera oryzisoli

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Klebsiella pneumoniae

characteristic: organism

text: Klebsiella pneumoniae

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Bordetella parapertussis

characteristic: project name

characteristic: sample derived from

text: Bordetella parapertussis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Rhizobium sp. Q54

characteristic: organism

text: Rhizobium sp. Q54

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO

text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Flavobacterium psychrophilum

characteristic: project name

characteristic: sample derived from

text: Flavobacterium psychrophilum

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Actinobacteria; Actinobacteria; Actinomycetales

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Actinomyces viscosus

characteristic: organism

text: Actinomyces viscosus

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Chloroflexi

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Thermoflexus hugenholtzii JAD2

characteristic: project name

characteristic: sample derived from

text: Thermoflexus hugenholtzii JAD2

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Opitutus sp. GAS368

characteristic: organism

text: Opitutus sp. GAS368

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Chitinophaga pinensis

characteristic: project name

characteristic: sample derived from

text: Chitinophaga pinensis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Polynucleobacter meluiroseus

characteristic: organism

text: Polynucleobacter meluiroseus

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Bacteroidetes

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Chitinophaga pinensis

characteristic: project name

characteristic: sample derived from

text: Chitinophaga pinensis

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Rhizobium sp. Q54

characteristic: organism

text: Rhizobium sp. Q54

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Verrucomicrobia; Opitutae

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Opitutus sp. GAS368

characteristic: project name

characteristic: sample derived from

text: Opitutus sp. GAS368

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Akkermansia muciniphila

characteristic: organism

text: Akkermansia muciniphila

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Actinobacteria; Actinobacteria

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Bifidobacterium breve

characteristic: project name

characteristic: sample derived from

text: Bifidobacterium breve

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


Pseudomonas aeruginosa PAO1

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: TU Dublin

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Pseudomonas aeruginosa PAO1

tag: Namespace:TU Dublin

characteristic: Submitter Id

text: not provided

text: Pseudomonas aeruginosa PAO1 with no treatment

text: Ireland

characteristic: geographic location (country and/or sea)

text: not applicable

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: clinical

characteristic: isolate

text: a wound in Melbourne Australia

text: 53.3498� N 6.2603� W

text: Pseudomonas aeruginosa PAO1

characteristic: organism

text: Pseudomonas aeruginosa PAO1

text: prokaryote

characteristic: serovar

characteristic: strain

characteristic: title


Pseudomonas aeruginosa PAO1NT

text: TU Dublin

text: public

text: Pseudomonas aeruginosa PAO1NT

text: not provided

characteristic: collection date

characteristic: description

text: Ireland

text: not applicable

text: Homo sapiens

text: clinical

text: a wound in Melbourne Australia

text: 53.3498� N 6.2603� W

text: Pseudomonas aeruginosa PAO1

text: Pseudomonas aeruginosa PAO1

text: prokaryote


Pseudomonas aeruginosa PAO1Cu

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: TU Dublin

text: public

text: Pseudomonas aeruginosa PAO1Cu

text: not provided

text: Pseudomonas aeruginosa PAO1 with Cu-tdda-phen treatment

text: Ireland

text: not applicable

text: Homo sapiens

text: clinical

text: a wound in Melbourne Australia

text: 53.3498� N 6.2603� W

text: Pseudomonas aeruginosa PAO1

text: Pseudomonas aeruginosa PAO1

text: prokaryote


Pseudomonas aeruginosa PAO1Mn

characteristic: External Id

text: TU Dublin

characteristic: INSDC center name

text: public

text: Pseudomonas aeruginosa PAO1Mn

text: not provided

text: Pseudomonas aeruginosa PAO1 with Mn-tdda-phen treatment

text: Ireland

text: not applicable

text: Homo sapiens

text: clinical

text: a wound in Melbourne Australia

text: 53.3498� N 6.2603� W

text: Pseudomonas aeruginosa PAO1

text: Pseudomonas aeruginosa PAO1

text: prokaryote


Pseudomonas aeruginosa PAO1Ag

text: TU Dublin

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Pseudomonas aeruginosa PAO1Ag

text: not provided

text: Pseudomonas aeruginosa PAO1 with Ag-tdda-phen treatment

text: Ireland

text: not applicable

text: Homo sapiens

text: clinical

text: a wound in Melbourne Australia

text: 53.3498� N 6.2603� W

text: Pseudomonas aeruginosa PAO1

text: Pseudomonas aeruginosa PAO1

text: prokaryote


text: PulseNet Next Generation Subtyping Methods Unit

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: CDC

characteristic: collected by

text: USA

characteristic: geo loc name

text: Vibrio sp. PNUSAV000001

text: human

text: Pathogen: clinical or host-associated sample from Vibrio sp. PNUSAV000001


text: live

text: Pathogen.cl

text: CDC

text: USA

text: Vibrio sp. PNUSAV000002

characteristic: organism

text: human

characteristic: strain

text: Pathogen: clinical or host-associated sample from Vibrio sp. PNUSAV000002


text: live

text: Pathogen.cl

text: CDC

text: USA

text: Vibrio sp. PNUSAV000003

text: human

text: Pathogen: clinical or host-associated sample from Vibrio sp. PNUSAV000003

characteristic: title


text: live

text: Pathogen.cl

text: CDC

text: USA

text: Vibrio sp. PNUSAV000004

text: human

text: Pathogen: clinical or host-associated sample from Vibrio sp. PNUSAV000004


text: live

text: Pathogen.cl

text: CDC

text: USA

text: Vibrio sp. PNUSAV000005

text: human

text: Pathogen: clinical or host-associated sample from Vibrio sp. PNUSAV000005


text: live

text: Pathogen.cl

text: CDC

text: USA

text: Vibrio sp. PNUSAV000006

text: human

text: Pathogen: clinical or host-associated sample from Vibrio sp. PNUSAV000006


text: live

text: Pathogen.cl

text: CDC

text: USA

text: Vibrio sp. PNUSAV000007

text: human

text: Pathogen: clinical or host-associated sample from Vibrio sp. PNUSAV000007


text: live

text: Pathogen.cl

text: CDC

text: USA

text: Vibrio sp. PNUSAV000008

text: human

text: Pathogen: clinical or host-associated sample from Vibrio sp. PNUSAV000008


text: clinical/research| human

characteristic: IFSAC+ Category

text: University of California at Davis

text: live

text: Pathogen.cl

text: clinical/host-associated

text: Jessica Jones/FDA

characteristic: biomaterial provider

text: FDA

characteristic: collected-by

characteristic: collection date

text: USA

text: Homo sapiens

characteristic: host

text: stool

characteristic: isolation source

characteristic: ontological term

text: Vibrio parahaemolyticus

text: whole organism

characteristic: sample type

characteristic: serovar

text: human

characteristic: source type

text: Pathogen: clinical or host-associated sample from Vibrio parahaemolyticus


characteristic: External Id

text: clinical/research, human

text: University of California at Davis

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Jessica Jones/FDA

text: FDA

text: USA

text: Homo sapiens

characteristic: nat-host

text: Vibrio parahaemolyticus

text: whole organism

text: human


text: clinical/research| human

characteristic: IFSAC+ Category

text: University of California at Davis

text: live

text: Pathogen.cl

characteristic: SRA accession

text: clinical/host-associated

text: Jessica Jones/FDA

characteristic: biomaterial provider

text: FDA

characteristic: collected-by

text: USA

text: Homo sapiens

text: stool

text: Vibrio parahaemolyticus

characteristic: organism

text: whole organism

text: human

characteristic: strain

characteristic: title


text: veterinary clinical/research| other animal

text: FDA Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.env

text: South Dakota State University| South Dakota Animal Disease Research and Diagnostic Laboratory

characteristic: collection date

text: USA:SD

text: USA

text: Ovis aries

characteristic: host

text: lung

text: sheep:FOODON_03411183, lung:UBERON_0002048

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

text: animal

characteristic: source type

text: Pathogen: environmental/food/other sample from Salmonella enterica


characteristic: External Id

text: veterinary clinical/research| cow

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: USA:CO

text: USA

text: Bos taurus

text: liver abscess

text: bovine:FOODON_03414374, liver:UBERON_0002107, abscess:hp_0025615

text: Salmonella enterica

text: GenomeTrakr

text: animal


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: INSDC status

text: female

characteristic: Sex

characteristic: Submitter Id

text: 24 month

characteristic: age

text: NCBI

characteristic: broker name

text: microglia

characteristic: cell type

text: missing

text: house mouse

characteristic: common name

text: WT

characteristic: genotype

text: missing

text: Mus musculus

text: Mus musculus

text: brain

text: brain

characteristic: tissue

text: microglia, female, LPS, 24month, rep3

text: LPS

characteristic: treatment


text: public

characteristic: SRA accession

text: female

text: 24 month

text: NCBI

text: microglia

text: missing

text: house mouse

text: WT

text: missing

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: brain

text: microglia, female, LPS, 24month, rep2

characteristic: title

text: LPS


characteristic: External Id

characteristic: INSDC first public

text: public

text: female

text: 24 month

text: NCBI

text: microglia

text: missing

text: house mouse

text: WT

text: missing

text: Mus musculus

text: Mus musculus

text: brain

text: brain

text: microglia, female, LPS, 24month, rep1

text: LPS


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

text: female

text: 14 month

text: NCBI

text: microglia

text: missing

text: house mouse

text: WT

text: missing

text: Mus musculus

text: Mus musculus

text: brain

text: brain

text: microglia, female, LPS, 14month, rep5

text: LPS


characteristic: ENA-LAST-UPDATE

text: public

characteristic: INSDC status

text: female

text: 14 month

text: NCBI

text: microglia

text: missing

text: house mouse

text: WT

text: missing

text: Mus musculus

text: Mus musculus

text: brain

text: brain

text: microglia, female, LPS, 14month, rep4

text: LPS


text: public

text: female

characteristic: Sex

characteristic: Submitter Id

text: 14 month

text: NCBI

text: microglia

text: missing

text: house mouse

text: WT

text: missing

text: Mus musculus

text: Mus musculus

text: brain

text: brain

text: microglia, female, LPS, 14month, rep3

text: LPS


text: public

text: female

text: 14 month

characteristic: age

text: NCBI

characteristic: broker name

text: microglia

text: missing

text: house mouse

text: WT

text: missing

text: Mus musculus

text: Mus musculus

text: brain

text: brain

text: microglia, female, LPS, 14month, rep2

text: LPS


text: public

text: female

text: 14 month

text: NCBI

text: microglia

characteristic: cell type

text: missing

text: house mouse

characteristic: common name

text: WT

text: missing

text: Mus musculus

text: Mus musculus

text: brain

text: brain

text: microglia, female, LPS, 14month, rep1

text: LPS


text: public

text: female

text: 3 month

text: NCBI

text: microglia

text: missing

text: house mouse

text: WT

characteristic: genotype

text: missing

text: Mus musculus

text: Mus musculus

text: brain

text: brain

characteristic: tissue

text: microglia, female, LPS, 3month, rep3

text: LPS


text: public

characteristic: SRA accession

text: female

text: 3 month

text: NCBI

text: microglia

text: missing

text: house mouse

text: WT

text: missing

text: Mus musculus

text: Mus musculus

text: brain

text: brain

text: microglia, female, LPS, 3month, rep2

text: LPS

characteristic: treatment


text: public

text: female

text: 3 month

text: NCBI

text: microglia

text: missing

text: house mouse

text: WT

text: missing

text: Mus musculus

characteristic: organism

text: Mus musculus

text: brain

text: brain

text: microglia, female, LPS, 3month, rep1

characteristic: title

text: LPS


characteristic: External Id

characteristic: INSDC first public

text: public

text: male

text: 24 month

text: NCBI

text: microglia

text: missing

text: house mouse

text: WT

text: missing

text: Mus musculus

text: Mus musculus

text: brain

text: brain

text: microglia, male, PBS, 24month, rep4

text: PBS


characteristic: ENA-FIRST-PUBLIC

characteristic: INSDC last update

text: public

text: male

text: 24 month

text: NCBI

text: microglia

text: missing

text: house mouse

text: WT

text: missing

text: Mus musculus

text: Mus musculus

text: brain

text: brain

text: microglia, male, PBS, 24month, rep3

text: PBS


characteristic: ENA-LAST-UPDATE

text: public

characteristic: INSDC status

text: male

text: 24 month

text: NCBI

text: microglia

text: missing

text: house mouse

text: WT

text: missing

text: Mus musculus

text: Mus musculus

text: brain

text: brain

text: microglia, male, PBS, 24month, rep2

text: PBS


text: public

text: male

characteristic: Sex

characteristic: Submitter Id

text: 24 month

text: NCBI

text: microglia

text: missing

text: house mouse

text: WT

text: missing

text: Mus musculus

text: Mus musculus

text: brain

text: brain

text: microglia, male, PBS, 24month, rep1

text: PBS


text: public

text: male

text: 19 month

characteristic: age

text: NCBI

characteristic: broker name

text: microglia

text: missing

text: house mouse

text: WT

text: missing

text: Mus musculus

text: Mus musculus

text: brain

text: brain

text: microglia, male, PBS, 19month, rep5

text: PBS


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