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text: coverage and kmer

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characteristic: geographic location (country and/or sea)

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text: metagenome-assembled genome

text: Freshwater lake

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text: Bifidobacterium breve

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text: Bifidobacterium breve

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status: PUBLIC

tag: attribute

text: public

tag: Namespace:BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

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characteristic: binning parameters

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text: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales

characteristic: description

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unit: DD

text: metagenome-assembled genome

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text: Freshwater lake

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characteristic: metagenomic source

text: Chryseobacterium gleum

characteristic: project name

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text: Chryseobacterium gleum

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characteristic: ENA first public

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characteristic: geographic location (country and/or sea)

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characteristic: organism

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characteristic: geographic location (country and/or sea)

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text: Opitutus sp. GAS368

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text: Sphingobacterium thalpophilum

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characteristic: metagenomic source

text: Akkermansia muciniphila

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characteristic: geographic location (country and/or sea)

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text: Bacteria; Cyanobacteria; ; Synechococcales; Synechococcaceae

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text: Synechococcus sp. UW140

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characteristic: geographic location (country and/or sea)

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characteristic: geographic location (country and/or sea)

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characteristic: geographic location (country and/or sea)

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characteristic: geographic location (country and/or sea)

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characteristic: geographic location (country and/or sea)

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characteristic: geographic location (country and/or sea)

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text: public

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text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Verrucomicrobia; Opitutae

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Opitutus sp. GAS368

characteristic: project name

characteristic: sample derived from

text: Opitutus sp. GAS368

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Bordetella parapertussis

characteristic: organism

text: Bordetella parapertussis

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Bacteroidetes

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Chitinophaga pinensis

characteristic: project name

characteristic: sample derived from

text: Chitinophaga pinensis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

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characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Acidobacteria

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Candidatus Sulfopaludibacter sp. SbA3

characteristic: organism

text: Candidatus Sulfopaludibacter sp. SbA3

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: public

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text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

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text: checkm

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characteristic: contamination score

text: Bacteria; Planctomycetes

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

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text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Candidatus Kuenenia stuttgartiensis

characteristic: project name

characteristic: sample derived from

text: Candidatus Kuenenia stuttgartiensis

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

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characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Actinobacteria; Actinobacteria; Candidatus Nanopelagicales; Candidatus Nanopelagicaceae; Candidatus Planktophila

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Candidatus Planktophila lacus

characteristic: organism

text: Candidatus Planktophila lacus

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

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characteristic: contamination score

text: Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Streptomyces griseus

characteristic: project name

characteristic: sample derived from

text: Streptomyces griseus

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

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characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Polynucleobacter meluiroseus

characteristic: organism

text: Polynucleobacter meluiroseus

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

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characteristic: contamination score

text: Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Methylomagnum ishizawai

characteristic: project name

characteristic: sample derived from

text: Methylomagnum ishizawai

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

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characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Nitrosovibrio sp. Nv4

characteristic: organism

text: Nitrosovibrio sp. Nv4

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

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text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Bordetella parapertussis

characteristic: project name

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text: Bordetella parapertussis

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

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text: public

characteristic: INSDC status

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characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Chryseobacterium gleum

characteristic: organism

text: Chryseobacterium gleum

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

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text: checkm

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characteristic: contamination score

text: Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Phenylobacterium deserti

characteristic: project name

characteristic: sample derived from

text: Phenylobacterium deserti

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

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text: public

characteristic: INSDC status

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text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Verrucomicrobia

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Akkermansia muciniphila

characteristic: organism

text: Akkermansia muciniphila

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

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text: checkm

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characteristic: contamination score

text: Bacteria; Proteobacteria; Gammaproteobacteria

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Klebsiella pneumoniae

characteristic: project name

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text: Klebsiella pneumoniae

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

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text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Herminiimonas arsenitoxidans

characteristic: organism

text: Herminiimonas arsenitoxidans

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO

text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

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text: checkm

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text: Bacteria; Proteobacteria; Alphaproteobacteria; Holosporales; Candidatus Paracaedibacteraceae

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Candidatus Finniella inopinata

characteristic: project name

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text: Candidatus Finniella inopinata

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

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text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Bifidobacterium breve

characteristic: organism

text: Bifidobacterium breve

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text: multi-marker approach

characteristic: taxonomic identity marker


text: public

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text: coverage and kmer

characteristic: binning parameters

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text: checkm

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characteristic: contamination score

text: Bacteria; Actinobacteria; Actinobacteria; Actinomycetales

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Actinomyces viscosus

characteristic: project name

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text: Actinomyces viscosus

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

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text: public

characteristic: INSDC status

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characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Sphingomonas paucimobilis

characteristic: organism

text: Sphingomonas paucimobilis

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

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characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae; Sediminibacterium

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Sediminibacterium ginsengisoli

characteristic: project name

characteristic: sample derived from

text: Sediminibacterium ginsengisoli

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

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text: public

characteristic: INSDC status

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characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Verrucomicrobia; Opitutae

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Opitutus sp. GAS368

characteristic: organism

text: Opitutus sp. GAS368

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text: multi-marker approach

characteristic: title


text: public

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text: coverage and kmer

characteristic: binning parameters

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characteristic: collection date

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text: checkm

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characteristic: contamination score

text: Bacteria; Candidatus Saccharibacteria

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

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text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Candidatus Saccharibacteria bacterium

characteristic: project name

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text: Candidatus Saccharibacteria bacterium

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

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text: MEGAHIT; kmer set 49,69,89,109,129,149

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text: coverage and kmer

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text: Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Sphingobacterium thalpophilum

characteristic: organism

text: Sphingobacterium thalpophilum

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text: multi-marker approach

characteristic: taxonomic identity marker


text: public

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text: coverage and kmer

characteristic: binning parameters

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text: checkm

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text: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; ; Alsobacter

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Alsobacter soli

characteristic: project name

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text: Alsobacter soli

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


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characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

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characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Bordetella parapertussis

characteristic: organism

text: Bordetella parapertussis

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: public

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text: coverage and kmer

characteristic: binning parameters

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text: checkm

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characteristic: contamination score

text: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Flavobacterium psychrophilum

characteristic: project name

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text: Flavobacterium psychrophilum

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

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text: public

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characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

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text: coverage and kmer

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text: Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Brevundimonas vancanneytii

characteristic: organism

text: Brevundimonas vancanneytii

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: public

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text: coverage and kmer

characteristic: binning parameters

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text: checkm

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text: Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Akkermansia muciniphila

characteristic: project name

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text: Akkermansia muciniphila

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characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

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text: public

characteristic: INSDC status

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characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Alphaproteobacteria

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Rhizobium sp. Q54

characteristic: organism

text: Rhizobium sp. Q54

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Pedobacter schmidteae

characteristic: project name

characteristic: sample derived from

text: Pedobacter schmidteae

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Bacteroidetes

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Chitinophaga pinensis

characteristic: organism

text: Chitinophaga pinensis

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Limnohabitans sp. Rim8

characteristic: project name

characteristic: sample derived from

text: Limnohabitans sp. Rim8

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Chryseobacterium gleum

characteristic: organism

text: Chryseobacterium gleum

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: public

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Actinobacteria; Actinobacteria

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Bifidobacterium breve

characteristic: project name

characteristic: sample derived from

text: Bifidobacterium breve

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Actinomyces viscosus

characteristic: organism

text: Actinomyces viscosus

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Bordetella parapertussis

characteristic: project name

characteristic: sample derived from

text: Bordetella parapertussis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Rhodoferax sp. OV413

characteristic: organism

text: Rhodoferax sp. OV413

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Crenothrix polyspora

characteristic: project name

characteristic: sample derived from

text: Crenothrix polyspora

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Spirosoma fluviale

characteristic: organism

text: Spirosoma fluviale

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Actinobacteria; Actinobacteria; Candidatus Nanopelagicales; Candidatus Nanopelagicaceae; Candidatus Planktophila

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Candidatus Planktophila lacus

characteristic: project name

characteristic: sample derived from

text: Candidatus Planktophila lacus

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales; Chitinophagaceae

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Chitinophaga pinensis

characteristic: organism

text: Chitinophaga pinensis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Ferrithrix thermotolerans DSM 19514

characteristic: project name

characteristic: sample derived from

text: Ferrithrix thermotolerans DSM 19514

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Comamonas sp. lk

characteristic: organism

text: Comamonas sp. lk

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Proteobacteria; Betaproteobacteria

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Bordetella parapertussis

characteristic: project name

characteristic: sample derived from

text: Bordetella parapertussis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Chloroflexi

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Thermoflexus hugenholtzii JAD2

characteristic: organism

text: Thermoflexus hugenholtzii JAD2

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Opitutus sp. GAS368

characteristic: project name

characteristic: sample derived from

text: Opitutus sp. GAS368

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Planctomycetes

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Candidatus Kuenenia stuttgartiensis

characteristic: organism

text: Candidatus Kuenenia stuttgartiensis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Brevundimonas vancanneytii

characteristic: project name

characteristic: sample derived from

text: Brevundimonas vancanneytii

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Asaia bogorensis

characteristic: organism

text: Asaia bogorensis

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Bacteroidetes

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Chitinophaga pinensis

characteristic: project name

characteristic: sample derived from

text: Chitinophaga pinensis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Alphaproteobacteria; Holosporales; Candidatus Paracaedibacteraceae

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Candidatus Finniella inopinata

characteristic: organism

text: Candidatus Finniella inopinata

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

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characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Chryseobacterium gleum

characteristic: project name

characteristic: sample derived from

text: Chryseobacterium gleum

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Planctomycetes; Planctomycetia

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Singulisphaera sp. GP187

characteristic: organism

text: Singulisphaera sp. GP187

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO

text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Phenylobacterium deserti

characteristic: project name

characteristic: sample derived from

text: Phenylobacterium deserti

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Limnohabitans

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Limnohabitans sp. Rim8

characteristic: organism

text: Limnohabitans sp. Rim8

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Actinobacteria; Actinobacteria

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Bifidobacterium breve

characteristic: project name

characteristic: sample derived from

text: Bifidobacterium breve

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Verrucomicrobia

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Akkermansia muciniphila

characteristic: organism

text: Akkermansia muciniphila

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Acidobacteria

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Candidatus Sulfopaludibacter sp. SbA3

characteristic: project name

characteristic: sample derived from

text: Candidatus Sulfopaludibacter sp. SbA3

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Alphaproteobacteria

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Rhizobium sp. Q54

characteristic: organism

text: Rhizobium sp. Q54

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Nitrosovibrio sp. Nv4

characteristic: project name

characteristic: sample derived from

text: Nitrosovibrio sp. Nv4

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; ; Alsobacter

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Alsobacter soli

characteristic: organism

text: Alsobacter soli

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Actinobacteria

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Bifidobacterium breve

characteristic: project name

characteristic: sample derived from

text: Bifidobacterium breve

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Bordetella parapertussis

characteristic: organism

text: Bordetella parapertussis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Fibrobacteres

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Fibrobacter sp. UWT3

characteristic: project name

characteristic: sample derived from

text: Fibrobacter sp. UWT3

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Bordetella parapertussis

characteristic: organism

text: Bordetella parapertussis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Methylomagnum ishizawai

characteristic: project name

characteristic: sample derived from

text: Methylomagnum ishizawai

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Methylophilaceae; Methylotenera

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Methylotenera oryzisoli

characteristic: organism

text: Methylotenera oryzisoli

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Planctomycetes

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Candidatus Kuenenia stuttgartiensis

characteristic: project name

characteristic: sample derived from

text: Candidatus Kuenenia stuttgartiensis

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: MEGAHIT; kmer set 49,69,89,109,129,149

characteristic: assembly software

text: coverage and kmer

text: checkm

text: Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales

text: freshwater lake

text: lake

text: fresh water

text: Czech Republic

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: Freshwater lake

text: freshwater metagenome

text: Akkermansia muciniphila

characteristic: organism

text: Akkermansia muciniphila

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: title


text: public

text: MEGAHIT; kmer set 49,69,89,109,129,149

text: coverage and kmer

characteristic: binning parameters

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: checkm

characteristic: completeness software

characteristic: contamination score

text: Bacteria; Bacteroidetes

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: fresh water

characteristic: environment (material)

text: Czech Republic

text: metagenome-assembled genome

characteristic: investigation type

text: Freshwater lake

text: freshwater metagenome

characteristic: metagenomic source

text: Chitinophaga pinensis

characteristic: project name

characteristic: sample derived from

text: Chitinophaga pinensis

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach