text: Echinococcus multilocularis

text: metacestode

text: Norway

text: Svalbard Territory, Grumant area

text: Microtus levis

text: Echinococcus multilocularis


status: PRIVATE

text: Echinococcus multilocularis

characteristic: Organism

characteristic: SRA accession

characteristic: description

text: metacestode

text: Switzerland

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: host

text: Echinococcus multilocularis

characteristic: scientific name

Name: Laboratoire Chrono-environnement UMR 6249 CNRS-UFC

Address: Bâtiment Rabelais - Hauts du Chazal, 19 rue Ambroise Paré, 25030 Besançon Cedex, France

Séverine Lallemand

FirstName: Séverine

LastName: Lallemand


text: Echinococcus multilocularis

text: not provided

text: metacestode

text: China

text: Canis lupus

text: Echinococcus multilocularis


text: Echinococcus multilocularis

text: not provided

text: adult

text: Japan

text: Hokkaido

characteristic: geographic location (region and locality)

text: Vulpes vulpes

text: Echinococcus multilocularis


text: Echinococcus multilocularis

text: adult

text: Poland

text: Warmińsko-Mazurskie

text: Vulpes vulpes

text: Echinococcus multilocularis


text: Echinococcus multilocularis

text: adult

text: Poland

text: Zachnodniopomorskie

text: Vulpes vulpes

text: Echinococcus multilocularis


text: Echinococcus multilocularis

text: adult

text: Poland

text: Lubuskie

text: Vulpes vulpes

text: Echinococcus multilocularis


text: Echinococcus multilocularis

text: adult

text: Poland

text: Świętokrzyskie

text: Vulpes vulpes

text: Echinococcus multilocularis


text: Echinococcus multilocularis

text: adult

text: Poland

text: Śląskie

text: Vulpes vulpes

text: Echinococcus multilocularis


text: Echinococcus multilocularis

text: adult

text: Poland

text: Podlaskie

text: Vulpes vulpes

text: Echinococcus multilocularis


text: Echinococcus multilocularis

text: adult

text: Poland

text: Mazowieckie

text: Vulpes vulpes

text: Echinococcus multilocularis


text: Echinococcus multilocularis

text: not provided

text: metacestode

text: Russia

text: Altaï

text: Homo sapiens

text: Echinococcus multilocularis


text: Echinococcus multilocularis

text: not provided

text: metacestode

text: Armenia

text: Homo sapiens

text: Echinococcus multilocularis


text: Echinococcus multilocularis

text: not provided

text: metacestode

text: Russia

text: Ryazan oblast

text: Meriones unguiculatus

text: Echinococcus multilocularis


text: Echinococcus multilocularis

text: not provided

text: metacestode

text: Russia

text: Yakutia

text: rodent

text: Echinococcus multilocularis


text: Echinococcus multilocularis

text: not provided

text: metacestode

text: Russia

text: Olkhon island (on Lake Baïkal)

text: Alticola olhonensis

text: Echinococcus multilocularis


status: PUBLIC

characteristic: ENA first public

tag: attribute

characteristic: ENA-CHECKLIST

text: Anthony Smith, NICD

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: Submitter Id

text: EnteroBase

characteristic: broker name

text: EnteroBase

text: A. Smith, National Institute for Communicable Diseases

characteristic: collection date

text: Whole genome sequencing data uploaded by EnteroBase user

text: South Africa

text: Gauteng

text: Human, Blood culture

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Paratyphi A

characteristic: serovar

characteristic: strain

characteristic: title


text: Anthony Smith, NICD

text: public

characteristic: SRA accession

text: EnteroBase

text: EnteroBase

text: South Africa

text: North West

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Typhi


characteristic: External Id

characteristic: INSDC last update

text: public

tag: Namespace:Germans Trias i Pujol Research Institute (IGTP)

text: human

characteristic: common name

text: Sorted IL-10+ iBreg (7-day B cells cocultured with MSC + TCL stimuli). B cell donor 1 and MSC donor A.

characteristic: description

text: Homo sapiens

text: Homo sapiens


text: Germans Trias i Pujol Research Institute (IGTP)

text: public

text: human

text: Sorted IL-10- iBreg (7-day B cells cocultured with MSC + TCL stimuli). B cell donor 1 and MSC donor A.

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Sorted IL-10+ iBreg (7-day B cells cocultured with MSC + TCL stimuli). B cell donor 2 and MSC donor A.

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Sorted IL-10- iBreg (7-day B cells cocultured with MSC + TCL stimuli). B cell donor 2 and MSC donor A.

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Sorted IL-10+ iBreg (7-day B cells cocultured with MSC + TCL stimuli). B cell donor 3 and MSC donor A.

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Sorted IL-10- iBreg (7-day B cells cocultured with MSC + TCL stimuli). B cell donor 3 and MSC donor A.

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Sorted IL-10+ iBreg (7-day B cells cocultured with MSC + TCL stimuli). B cell donor 1 and MSC donor B.

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Sorted IL-10- iBreg (7-day B cells cocultured with MSC + TCL stimuli). B cell donor 1 and MSC donor B.

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Sorted IL-10+ iBreg (7-day B cells cocultured with MSC + TCL stimuli). B cell donor 2 and MSC donor B.

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Sorted IL-10- iBreg (7-day B cells cocultured with MSC + TCL stimuli). B cell donor 2 and MSC donor B.

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Sorted IL-10+ iBreg (7-day B cells cocultured with MSC + TCL stimuli). B cell donor 3 and MSC donor B.

text: Homo sapiens

text: Homo sapiens


text: public

text: human

text: Sorted IL-10- iBreg (7-day B cells cocultured with MSC + TCL stimuli). B cell donor 3 and MSC donor B.

text: Homo sapiens

text: Homo sapiens


MDAMB231 PT4 scRNA-seq

text: Istituto Europeo di Oncologia

text: public

text: MDAMB231 PT4 scRNA-seq

tag: Namespace:Istituto Europeo di Oncologia

text: human

text: scRNAseq of an MDAMB231-derived primary tumor (PT1). Per each cell we determined both the transcriptional profile and the clonal identity through a library of expressed barcodes (Adamson, Cell, 2016).

text: Homo sapiens

text: Homo sapiens

text: MDAMB231 PT4 scRNA-seq


text: NEW YORK UNIVERSITY SCHOOL OF MEDICINE

text: public

tag: Namespace:NEW YORK UNIVERSITY SCHOOL OF MEDICINE

text: n.a.

text: Varicella-zoster virus

text: Human alphaherpesvirus 3

text: Human alphaherpesvirus 3


text: Broad Oak

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: Broad Oak

text: Quercus robur

text: Quercus robur


characteristic: ENA first public

text: CAM

text: public

text: Heliconius butterfly

text: Antennal RNA extract

text: Heliconius erato demophoon

text: Heliconius erato demophoon

text: Antenna


Chapare mammarenavirus

text: MIT Lincoln Laboratory

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Viral

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: depth

text: Chapare mammarenavirus

text: Bolivia: Samuzabeti, Chapare Province, Cochabama Department

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Mammarenavirus chapareense

text: Viruses Even 6


Guanarito mammarenavirus

text: MIT Lincoln Laboratory

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Viral

text: Guanarito mammarenavirus

text: Mammarenavirus guanaritoense

characteristic: organism

text: Viruses Even 8


Marburg marburgvirus

text: MIT Lincoln Laboratory

text: live

text: Viral

characteristic: SRA accession

text: Marburg marburgvirus

text: Kenya

text: Marburg virus/H.sapiens-tc/KEN/1980/Mt. Elgon-Musoke

characteristic: isolate

text: Orthomarburgvirus marburgense

text: Viruses Even 14

characteristic: title


Machupo mammarenavirus

characteristic: External Id

text: MIT Lincoln Laboratory

characteristic: INSDC last update

text: live

text: Viral

text: Machupo mammarenavirus

text: Mammarenavirus machupoense

text: Carvallo

characteristic: strain

text: Viruses Even 16


Sabia mammarenavirus

text: MIT Lincoln Laboratory

text: live

text: Viral

text: Sabia mammarenavirus

characteristic: description

text: Mammarenavirus brazilense

text: Viruses Even 18


Chapare mammarenavirus Staggered

text: MIT Lincoln Laboratory

characteristic: INSDC first public

text: live

text: Viral

text: Chapare mammarenavirus

text: Homo sapiens

text: Mammarenavirus chapareense

text: Chapare mammarenavirus


Guanarito mammarenavirus Staggered

text: MIT Lincoln Laboratory

characteristic: INSDC secondary accession

text: live

text: Viral

text: Guanarito mammarenavirus

text: Mammarenavirus guanaritoense

text: Guanarito mammarenavirus


Marburg marburgvirus Staggered

text: MIT Lincoln Laboratory

text: live

text: Viral

characteristic: NCBI submission model

text: Marburg marburgvirus

text: Kenya

text: Orthomarburgvirus marburgense

text: Marburg marburgvirus


Machupo mammarenavirus Staggered

text: MIT Lincoln Laboratory

text: live

text: Viral

characteristic: NCBI submission package

text: Machupo mammarenavirus

text: Mammarenavirus machupoense

text: Carvallo

text: Machupo mammarenavirus


Sabia mammarenavirus Staggered

text: MIT Lincoln Laboratory

text: live

text: Viral

characteristic: depth

text: Sabia mammarenavirus

text: Mammarenavirus brazilense

text: Sabia mammarenavirus


Camponotus conithorax

text: National Museum of Natural History, Smithsonian

text: live

text: Invertebrate

text: PSW 15340

characteristic: collection date

text: Australia

characteristic: geo loc name

text: Colobopsis conithorax

characteristic: specimen voucher

text: 1 specimen

characteristic: tissue

text: Invertebrate sample from Camponotus conithorax


Camponotus vitiensis

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Invertebrate

text: PSW 15741

text: Fiji

text: Colobopsis vitiensis

characteristic: organism

text: 1 specimen

text: Invertebrate sample from Camponotus vitiensis


name: The causal agent of Red Stripe sugarcane disease

text: INTA

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:5.0

text: plain

characteristic: env biome

text: crop field

characteristic: env feature

text: plant

text: Argentina: Tucuman

text: sugarcane

characteristic: host

text: Luria Bertani broth at 30 degree in a shaking incubator for 2 days

text: 27.01 S 65.22 W

characteristic: lat lon

text: Paracidovorax avenae

text: Fontana P. D et al. Isolation and genetic characterization of Acidovorax avenae from red stripe infected sugarcane in Northwestern Argentina. European Journal of Plant Pathology (DOI 10.1007/s10658-013-0263-y). Vol 137, Issue 3, Pp 525-534

text: plant tissue

characteristic: sample type

text: MIGS Cultured Bacterial/Archaeal sample from Acidovorax avenae

characteristic: title


characteristic: External Id

text: MRIGlobal

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: NCBI submission model

text: Venezuela: Centro de Recria, Apure State

text: Venezuelan Hemorrhagic Fever

characteristic: host disease

text: Rodent

characteristic: isolation source

text: Vero cells

characteristic: lab host

text: Mammarenavirus guanaritoense

text: R.Salas,NIH.,Caracas,Venezuela

characteristic: provider

text: Sigmodon alstoni

characteristic: specific host

text: host-associated pathogen

characteristic: strain

text: Arenavirus, New World

characteristic: subtype

text: Guanarito Virus VHF1608


text: MRIGlobal

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: collection date

text: Venezuela: Palo Seco, Guarico State

characteristic: geo loc name

text: Venezuelan Hemorrhagic Fever

text: Rodent

text: Vero cells

text: Mammarenavirus guanaritoense

characteristic: organism

text: Zygodontomys brevicauda

text: host-associated pathogen

text: Arenavirus, New World

text: Guanarito Virus VHF1750


Legionella micdadei (D5727)

characteristic: External Id

text: Emory University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: CDC

characteristic: collected by

text: Legionella micdadei

text: Pathogen: clinical or host-associated sample from Legionella micdadei D5727

characteristic: title


Acidovorax citrulli M6

text: Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: Giora Kritzman

text: Israel

text: rotted fruit from symptomatic plant

characteristic: isolation source

text: 30.65864295 N 35.21984249 E

characteristic: lat lon

text: Melon

characteristic: nat-host

text: Paracidovorax citrulli

text: Pathogen: environmental/food/other sample from Acidovorax citrulli


Pseudoruegeria sp. SF-16

text: Anhui University

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: sea

characteristic: env biome

text: China: Sanya

text: starfish

characteristic: host

text: 18.22 N 109.45000000 E

text: Tropicimonas marinistellae

text: whole organism

characteristic: sample type

characteristic: strain

text: Cultured sample from Pseudoruegeria sp.

text: type strain of Pseudoruegeria marinistellae

characteristic: type material


text: University of Florida

text: live

characteristic: INSDC status

text: Plant

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: cultivar

text: seedling

characteristic: dev stage

text: USA

characteristic: geo loc name

text: Tripidium rufipilum

characteristic: organism

text: Leaf

characteristic: tissue

text: Plant sample from Saccharum rufipilum


L. micdadei ATCC33218

characteristic: External Id

text: Tel Aviv University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

characteristic: NCBI submission model

text: Tatlock H.

characteristic: collected by

characteristic: collection date

characteristic: culture collection

text: USA: Fort Bragg, North Carolina

text: Homo sapiens

text: legionellosis

characteristic: host disease

text: blood

text: Human blood via yolk sac

characteristic: isolation source

text: Legionella micdadei

text: TATLOCK

text: Pathogen: clinical or host-associated sample from Tatlockia micdadei

characteristic: title

text: type strain of Tatlockia micdadei


text: King Abdulah University of Science and Technology

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: Ulrich Stingl

characteristic: biomaterial provider

text: Hikmawan Tyas

text: 2400 m under the water

characteristic: depth

text: brine-seawater interface

characteristic: env biome

text: Saudi Arabia: Red Sea

text: brine-seawater interface

text: Guishan Zhang

characteristic: identified by

text: Erba brine-seawater interface

text: Pseudoponticoccus marisrubri

text: 500 ml

text: brine water

characteristic: sample type

characteristic: strain

text: 30 centigrade

characteristic: temp

text: Microbe sample from Ponticoccus marisrubri

text: type strain of Ponticoccus marisrubri

characteristic: type material


characteristic: External Id

text: MRIGlobal

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: SRA accession

text: Venezuela

characteristic: geo loc name

text: Venezuelan hemorrhagic fever

text: Rodent

text: Vero cells

characteristic: lab host

text: Mammarenavirus guanaritoense

characteristic: organism

text: ?, V+2

text: R.Salas, NIH. ,Caracas, Venezuela

characteristic: provider

text: Zygodontomys brevicauda

characteristic: specific host

text: Host-associated pathogen

text: New World Arenavirus

characteristic: subtype

text: Guanarito Virus VHF1986


text: MRIGlobal

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission package

characteristic: collection date

text: Venezuela:Arismendi, Barinas State

text: Venezuelan hemorrhagic fever

characteristic: host disease

text: Rodent (cotton rat)

characteristic: isolation source

text: Vero cells

text: Mammarenavirus guanaritoense

text: NIH,Caracas,Venezuela

text: Sigmodon alstoni

text: Host-associated pathogen

text: New World Arenavirus

text: Guanarito Virus VHF2008

characteristic: title


characteristic: External Id

text: MRIGlobal

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: Venezuela: Cano Hondo, Cojedes State

text: Venezuelan hemorrhagic fever

text: Rodent (cotton rat)

text: Vero cells

text: Mammarenavirus guanaritoense

text: ?, V+2

text: R.Salas, INH, Caracas, Venezuela

text: Sigmodon alstoni

text: Host-associated pathogen

characteristic: strain

text: New World Arenavirus

text: Guanarito Virus VHF3900


text: MRIGlobal

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: SRA accession

text: Venezuela: Cano Venado, Portuguesa State

characteristic: geo loc name

text: Venezuelan hemorrhagic fever

text: human

text: Vero cells

text: Mammarenavirus guanaritoense

text: ?, V+2

text: SPB CDC

text: Homo sapiens

text: Clinical

text: CVH-950801, CFF103

text: New World Arenavirus

text: Guanarito Virus CVH-950801, CFF103


text: MRIGlobal

text: live

text: Pathogen.cl

text: Venezuela: Guanarito, Maporita, Portuguesa State

text: Venezuelan hemorrhagic fever

text: human

text: Vero cells

characteristic: lab host

text: Mammarenavirus guanaritoense

characteristic: organism

text: ?, V+2

text: SPB CDC

characteristic: provider

text: Homo sapiens

characteristic: specific host

text: Clinical

text: CVH-960104, CFF102

text: New World Arenavirus

text: Guanarito Virus CVH-960104, CFF102


text: MRIGlobal

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission package

text: Venezuela: Guanarito, Mata de guasimo, Portuguesa State

text: Venezuelan hemorrhagic fever

text: human

text: Vero cells

text: Mammarenavirus guanaritoense

text: ?, V+2

text: SPB CDC

text: Homo sapiens

text: Clinical

text: CVH-960201, CFF108

text: New World Arenavirus

characteristic: subtype

text: Guanarito Virus CVH-960201, CFF108


text: MRIGlobal

text: live

text: Pathogen.cl

characteristic: collection date

text: Venezuela:Cano Hondo, Cojedes State

text: Venezuelan hemorrhagic fever

characteristic: host disease

text: Rodent

characteristic: isolation source

text: Vero cells

text: Mammarenavirus guanaritoense

text: ?, V+2

text: INH, Caracas, Venezuela

text: Zygodontomys brevicauda

text: Host-associated pathogen

text: New World Arenavirus

text: Guanarito Virus VHF4016

characteristic: title


characteristic: External Id

text: MRIGlobal

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: Venezuela: La Rompia, Portuguesa State

text: Venezuelan hemorrhagic fever

text: Rodent

text: Vero cells

text: Mammarenavirus guanaritoense

text: R. Salas, INH, Caracas, Venezuela

text: Zygodontomys brevicauda

text: Host-associated pathogen

characteristic: strain

text: New World Arenavirus

text: Guanarito Virus VHF4696


text: MRIGlobal

text: live

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: SRA accession

text: Venezuela: Guarico State

characteristic: geo loc name

text: Venezuelan hemorrhagic fever

text: Rodent (cotton rat)

text: Vero cells

text: Mammarenavirus guanaritoense

text: R. Salas, INH, Caracas, Venezuela

text: Sigmodon alstoni

text: Host-associated pathogen

text: New World Arenavirus

text: Guanarito Virus VHF5306


text: MRIGlobal

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

text: Bolivia

text: Bolivian hemorrhagic fever

text: Rodent

text: Vero cells

characteristic: lab host

text: Mammarenavirus machupoense

characteristic: organism

text: SHB+1, V+3

text: CDC 810144

characteristic: provider

text: Calomys callosus

text: Host-associated pathogen

text: Calomys 221600

text: Arenavirus, New World

text: Machupo virus Calomys 221600


text: MRIGlobal

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission package

text: Bolivia

text: Bolivian hemorrhagic fever

text: human

text: Vero cells

text: Mammarenavirus machupoense

text: CDC 810140

text: Homo sapiens

characteristic: specific host

text: Clinical

text: Arenavirus, New World

text: Machupo virus 9430069


text: MRIGlobal

text: live

text: Pathogen.cl

characteristic: collection date

text: Bolivia:Guayaramerin

text: Bolivian hemorrhagic fever

characteristic: host disease

text: Serum

text: human

characteristic: isolation source

text: Vero cells

text: Mammarenavirus machupoense

text: CDC 807253

text: Homo sapiens

text: Clinical

text: Arenavirus, New World

characteristic: subtype

text: Machupo virus 9530537


characteristic: External Id

text: MRIGlobal

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: Bolivia

text: Bolivian hemorrhagic fever

text: Rodent

text: Vero cells

text: Mammarenavirus machupoense

text: SHB+1, V+3

text: CDC 810162

text: Calomys callosus

text: Host-associated pathogen

text: Calomys 14795

text: Arenavirus, New World

text: Machupo virus Calomys 14795

characteristic: title


text: MRIGlobal

text: live

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: SRA accession

text: Bolivia

characteristic: geo loc name

text: Bolivian hemorrhagic fever

text: Rodent

text: Vero cells

text: Mammarenavirus machupoense

text: CDC 810071

text: Calomys callosus

text: Host-associated pathogen

text: Calomys 9301012

characteristic: strain

text: Arenavirus, New World

text: Machupo virus Calomys 9301012


text: MRIGlobal

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

text: Bolivia

text: Bolivian hemorrhagic fever

text: human

text: Vero cells

characteristic: lab host

text: Mammarenavirus machupoense

characteristic: organism

text: missing, V+2

text: NAMRCD,Lima, Peru

characteristic: provider

text: Homo sapiens

text: Clinical

text: Arenavirus, New World

text: Machupo virus OBT2102


text: JCVI

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission package

text: Kendra Alfson

characteristic: collected by

text: Angola:Lake Victoria

characteristic: host age

text: female

characteristic: host sex

text: Marburg virus/H.sapiens-tc/AGO/2005/Angola-810820

characteristic: isolate

text: blood

text: Orthomarburgvirus marburgense

text: VeroE6 2

text: MARV/Homo sapiens-tc/AGO/Angola_200501379/2005

text: Pathogen: clinical or host-associated sample from Marburg marburgvirus


characteristic: External Id

text: JCVI

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: Alan Barrett

characteristic: collection date

text: Angola:Uige

text: female

text: Marburg virus/H.sapiens-tc/AGO/2005/Angola-200501379

text: Orthomarburgvirus marburgense

text: Vero E6 cells

text: Angola

characteristic: subtype


tag: Namespace:DOE Joint Genome Institute

text: DOE Joint Genome Institute

text: live

text: MIGS.ba

characteristic: NCBI submission model

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: Paenacidovorax caeni

characteristic: strain

text: Acidovorax caeni DSM 19327

characteristic: title

text: type strain of Acidovorax caeni

characteristic: type material


text: DOE Joint Genome Institute

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:5.0

text: Paracidovorax cattleyae

characteristic: organism

text: DSM 17101

text: Acidovorax cattleyae DSM 17101

text: type strain of Acidovorax cattleyae


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIGS:5.0

text: Paracidovorax wautersii

text: DSM 27981

text: Acidovorax wautersii DSM 27981

text: type strain of Acidovorax wautersii


text: JCVI

text: live

text: Pathogen.cl

text: Alan Barrett

characteristic: collected by

text: Kenya

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: female

characteristic: host sex

text: Ravn virus/H. sapiens-tc/KEN/1987/Ravn-CDC811103

characteristic: isolate

text: serum

characteristic: isolation source

text: Orthomarburgvirus marburgense

text: Vero E6, P2


characteristic: External Id

text: DOE Joint Genome Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS.ba

characteristic: NCBI submission model

characteristic: culture collection

text: Keywords: GSC:MIxS;MIGS:5.0

text: Paracidovorax anthurii

text: CFPB 3232

text: Acidovorax anthurii DSM 16745

text: type strain of Acidovorax anthurii


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: Hymenobacter arizonensis

text: OR362-8,ATCC BAA-1266,JCM 13504

characteristic: strain

text: Hymenobacter arizonensis DSM 17870

characteristic: title


Dera Ghazi Khan

text: USAMRIID

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.cl

text: Fatima Begum

characteristic: collection date

text: Pakistan: Sakhi Sarwar, D.G. Khan District

text: Hyalomma dromedarii

text: Larval ticks (Hy. Dromedarri)

text: 29.97 N 70.33 E

characteristic: lat lon

text: Orthonairovirus khani

characteristic: organism

text: Pathogen: clinical or host-associated sample from Dera Ghazi Khan orthonairovirus


Hughes

text: USAMRIID

text: live

text: Pathogen.cl

characteristic: NCBI submission package

text: L.E. Hughes

characteristic: collected by

text: USA: Bush Key, Dry Tortugas Island, Florida

characteristic: geo loc name

text: Ornithodoros capensis group

characteristic: host

text: pool of 12 Adult ticks

text: Orthonairovirus bushkeyense

text: Pathogen: clinical or host-associated sample from Hughes orthonairovirus


Dugbe

characteristic: External Id

text: USAMRIID

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: Virus Research Lab, Univ. Ibadan

text: Nigeria: University of Ibadan, Ibadan

text: Amblyomma variegatum

text: Adult male tick picked by hand from cattle

characteristic: isolation source

text: 7.33 N 3.83 E

text: Orthonairovirus dugbeense

text: Ib Ar 1792 (AR1792)

text: Pathogen: clinical or host-associated sample from Dugbe orthonairovirus


Sakhalin

text: USAMRIID

characteristic: INSDC last update

text: live

text: Pathogen.cl

characteristic: NCBI submission model

text: D.K. Lvov

text: Russia: Tyuleniy Island, Sea of Okhotsh

text: Ixodes (Ceratixodes) putus

text: Nymphs

text: 48.50 N 144.72 E

text: Orthonairovirus sakhalinense

text: Pathogen: clinical or host-associated sample from Sakhalin orthonairovirus


text: Public Health Agency of CAnada

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: SRA accession

text: Xiangguo Qiu

text: Canada:Winnipeg CSCHAH

text: Mus musculus

text: 6 weeks

characteristic: host age

text: female

characteristic: host sex

text: Euthanized for sampling

text: Liver

text: Angola

characteristic: isolate

text: liver homogenate

text: Orthomarburgvirus marburgense

characteristic: passage

text: From cell culture supernatant


text: Public Health Agency of CAnada

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.cl

text: Xiangguo Qiu

characteristic: collection date

text: Canada:Winnipeg CSCHAH

text: Mus musculus

text: 6 weeks

text: female

text: Euthanized for sampling

text: Liver

text: Angola

text: liver homogenate

text: Orthomarburgvirus marburgense

text: From previous passage liver homogenate

characteristic: title


text: Public Health Agency of CAnada

text: live

text: Pathogen.cl

characteristic: NCBI submission package

text: Xiangguo Qiu

characteristic: collected by

text: Canada:Winnipeg CSCHAH

characteristic: geo loc name

text: Mus musculus

text: 6 weeks

text: Euthanized for sampling

text: Terminal disease

text: Angola

text: liver homogenate

text: Orthomarburgvirus marburgense

characteristic: organism

text: from p0 from final passage liver homogenate


characteristic: External Id

text: Public Health Agency of CAnada

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: Xiangguo Qiu

text: Canada:Winnipeg CSCHAH

characteristic: host

text: Angola

text: Cell culture supernatant

characteristic: isolation source

text: Orthomarburgvirus marburgense

text: Stock

text: Final Stock


text: DOE Joint Genome Institute

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: MIGS.ba

characteristic: NCBI submission model

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: Paracidovorax valerianellae

text: DSM 16619

characteristic: strain

text: Acidovorax valerianellae DSM 16619

text: type strain of Acidovorax valerianellae

characteristic: type material


Canine distemper virus

text: UCSF

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Viral

characteristic: collection date

text: Canine distemper virus

text: USA: Boston

text: Rhode Island

characteristic: isolate

text: cell culture

text: Vero cells

characteristic: lab host

text: Morbillivirus canis

text: Viral sample from Canine morbillivirus


Trebouxia sp. TR9

text: Universidad de Valencia

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: Spain: Castellon, Sierra El Toro

characteristic: geo loc name

text: Ramalina farinacea

text: Trebouxia lynnae

characteristic: organism

text: cell culture

characteristic: sample type

text: Amplicon sequences from Trebouxia sp. TR9

characteristic: title


characteristic: External Id

text: DOE Joint Genome Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:5.0

text: Russia: Moscow

text: 55.75 N 37.62 E

characteristic: lat lon

text: Coprobacter fastidiosus NSB1 = JCM 33896

text: Coprobacter fastidiosus DSM 26242

text: type strain of Coprobacter fastidiosus


text: the Univesity of Florida

characteristic: INSDC secondary accession

text: live

text: Plant

characteristic: NCBI submission model

characteristic: SRA accession

characteristic: cultivar

text: vegetative stage

characteristic: dev stage

text: USA:Florida

text: Tripidium rufipilum

text: Leaf

characteristic: tissue

text: Plant sample from Saccharum rufipilum


Wenyingzhuangia sp. OF219

text: Ocean University of China

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: collection date

text: China: Jiaozhou Bay

text: marine sediment

characteristic: isolation source

text: Wenyingzhuangia aestuarii

text: cell culture

characteristic: strain

text: Microbe sample from Wenyingzhuangia sp. OF219


text: Michigan State University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: Bacterial plant pathogens causing disease on Orchid

characteristic: description

text: USA: California

characteristic: geo loc name

text: Phalaenopsis amabilis

characteristic: host

text: leaf

text: Paracidovorax cattleyae

characteristic: organism

text: Isolated bacterium

characteristic: sample type


LEY3_Ruminococcus bicirculans_43_17

characteristic: External Id

text: Jill Banfield's Lab at Berkeley

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: LEY3_Ruminococcus bicirculans_43_17 genome sampled from healthy adult 3C

text: TRUE

characteristic: environmental sample

text: Homo sapiens

characteristic: isolate

text: healthy adult 3C

characteristic: isolation-source

text: human gut metagenome

characteristic: metagenome source

text: TRUE

characteristic: metagenomic

text: This biosample is a metagenomic assembly obtained from the human gut metagenome BioSample: SAMN04978193.

characteristic: note

text: Ruminococcus bicirculans (ex Wegman et al. 2014)

text: metagenomic assembly

characteristic: sample-type

text: LEY3_Ruminococcus bicirculans_43_17

characteristic: title


Mock coinfection Ot, Rp 1

text: Biological Defense Research Directorate, Navy Medical Research Center - Frederick

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: not applicable

text: not applicable

text: mock clinical sample

text: not applicable

text: not applicable

text: not applicable

text: mock clinical sample

text: not applicable

characteristic: mock sample number

text: synthetic metagenome

text: synthetic metagenome

text: Rickettsia prowazekii

text: not applicable

characteristic: patient number

characteristic: replicate

text: Karp, Breinl

characteristic: strain

text: Mock coinfection Ot, Rp 1


Mock coinfection Ot, Rp 2

characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: not applicable

text: not applicable

text: mock clinical sample

characteristic: description

text: not applicable

text: not applicable

characteristic: host

text: not applicable

text: mock clinical sample

text: not applicable

text: synthetic metagenome

characteristic: organism

text: synthetic metagenome

text: Rickettsia prowazekii

text: not applicable

text: Karp, Breinl

text: Mock coinfection Ot, Rp 2


text: Chinese Academy of Agricultural Sciences

text: live

text: Metagenome or environmental

text: China:yancheng of jiangsu province

text: layer hen

text: not collected

text: chicken gut metagenome

text: chicken gut metagenome

text: Metagenome or environmental sample from chicken gut metagenome

characteristic: title